BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3742548.2.1
(554 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ271702.1|BJ271702 BJ271702 Y. Ogihara unpublished cDNA... 161 6e-038
gb|BJ276920.1|BJ276920 BJ276920 Y. Ogihara unpublished cDNA... 161 6e-038
gb|CD877581.1|CD877581 AZO4.100K04F010925 AZO4 Triticum aes... 92 5e-017
gb|CD877582.1|CD877582 AZO4.100K04R011122 AZO4 Triticum aes... 92 5e-017
gb|CA654856.1|CA654856 wlm0.pk0008.e3 wlm0 Triticum aestivu... 80 2e-013
gb|BE423451.1|BE423451 WHE0064_C08_E16ZS Wheat endosperm cD... 76 3e-012
gb|BE424734.1|BE424734 WHE0089_H06_P11ZS Wheat endosperm cD... 76 3e-012
gb|CD453896.1|CD453896 WHE0902_C01_E02ZT CS wheat 5-15 DAP ... 76 3e-012
gb|CD894532.1|CD894532 G118.126H06R011119 G118 Triticum aes... 76 3e-012
gb|CD898063.1|CD898063 G174.107P15R011120 G174 Triticum aes... 76 3e-012
gb|CD900135.1|CD900135 G174.114J14F010824 G174 Triticum aes... 76 3e-012
gb|CD903608.1|CD903608 G356.110N04F010919 G356 Triticum aes... 76 3e-012
gb|CD889905.1|CD889905 G118.113G13R010926 G118 Triticum aes... 70 2e-010
gb|CD893102.1|CD893102 G118.122N13R010927 G118 Triticum aes... 70 2e-010
gb|BE398830.1|BE398830 WHE0026.F05F990702 ITEC WHE Wheat En... 68 7e-010
gb|CD886570.1|CD886570 G118.102K12F010601 G118 Triticum aes... 62 4e-008
gb|BE398785.1|BE398785 WHE0025.F11F990702 ITEC WHE Wheat En... 60 2e-007
gb|BE430555.1|BE430555 SUN004.B07R991213 ITEC SUN Wheat cDN... 60 2e-007
gb|BQ236556.1|BQ236556 TaE05029H11F TaE05 Triticum aestivum... 60 2e-007
gb|BQ238476.1|BQ238476 TaE05003F08F TaE05 Triticum aestivum... 60 2e-007
gb|CA710529.1|CA710529 wdk2c.pk017.o17 wdk2c Triticum aesti... 60 2e-007
gb|BQ167358.1|BQ167358 WHE0064_B09_C18ZK Cheyenne wheat end... 60 2e-007
gb|CD453954.1|CD453954 WHE0927_E09_J17ZT CS wheat 5-15 DAP ... 60 2e-007
gb|CD895568.1|CD895568 G174.100D07R011119 G174 Triticum aes... 60 2e-007
gb|CD907549.1|CD907549 G468.107F01R010929 G468 Triticum aes... 60 2e-007
gb|CD909393.1|CD909393 G468.112I08R010929 G468 Triticum aes... 60 2e-007
gb|BJ294999.1|BJ294999 BJ294999 Y. Ogihara unpublished cDNA... 58 7e-007
gb|BE423441.1|BE423441 WHE0064_B09_C18ZS Wheat endosperm cD... 56 3e-006
gb|BG314191.1|BG314191 WHE2460_D08_G16ZS Triticum monococcu... 56 3e-006
gb|BQ238536.1|BQ238536 TaE05002H09F TaE05 Triticum aestivum... 56 3e-006
gb|CD886706.1|CD886706 G118.103A21F010605 G118 Triticum aes... 56 3e-006
gb|CD886707.1|CD886707 G118.103A21R010921 G118 Triticum aes... 56 3e-006
gb|BJ253107.1|BJ253107 BJ253107 Y. Ogihara unpublished cDNA... 52 4e-005
gb|BJ288719.1|BJ288719 BJ288719 Y. Ogihara unpublished cDNA... 52 4e-005
gb|CA612615.1|CA612615 wr1.pk0137.d10 wr1 Triticum aestivum... 52 4e-005
gb|CA650713.1|CA650713 wre1n.pk184.c3 wre1n Triticum aestiv... 52 4e-005
gb|CD898062.1|CD898062 G174.107P15F010823 G174 Triticum aes... 52 4e-005
gb|CA696987.1|CA696987 wlk4.pk0007.c1 wlk4 Triticum aestivu... 50 2e-004
gb|CD895567.1|CD895567 G174.100D07F010705 G174 Triticum aes... 50 2e-004
gb|BJ220806.1|BJ220806 BJ220806 Y. Ogihara unpublished cDNA... 48 6e-004
gb|AL828759.1|AL828759 AL828759 p:739 Triticum aestivum cDN... 48 6e-004
gb|CA484859.1|CA484859 WHE4311_E05_J09ZS Wheat meiotic anth... 48 6e-004
gb|CA597442.1|CA597442 wpa1c.pk015.a12 wpa1c Triticum aesti... 48 6e-004
gb|CA728880.1|CA728880 wdi1c.pk005.l7 wdi1c Triticum aestiv... 48 6e-004
gb|CD877818.1|CD877818 AZO4.101D04R011121 AZO4 Triticum aes... 48 6e-004
gb|CD891122.1|CD891122 G118.116E11F010723 G118 Triticum aes... 48 6e-004
gb|CD891123.1|CD891123 G118.116E11R010926 G118 Triticum aes... 48 6e-004
gb|CD891893.1|CD891893 G118.118N15F010724 G118 Triticum aes... 48 6e-004
gb|CD891894.1|CD891894 G118.118N15R010926 G118 Triticum aes... 48 6e-004
gb|CD897738.1|CD897738 G174.106P08R011120 G174 Triticum aes... 48 6e-004
gb|CD934011.1|CD934011 GR45.122L15R010831 GR45 Triticum aes... 48 6e-004
gb|CB307497.1|CB307497 HFIG482 Hessian fly infested cDNA li... 48 6e-004
gb|CK205958.1|CK205958 FGAS017525 Triticum aestivum FGAS: L... 48 6e-004
gb|CK207747.1|CK207747 FGAS019408 Triticum aestivum FGAS: L... 48 6e-004
gb|CK207776.1|CK207776 FGAS019440 Triticum aestivum FGAS: L... 48 6e-004
gb|CK212282.1|CK212282 FGAS024152 Triticum aestivum FGAS: L... 48 6e-004
gb|DR736603.1|DR736603 FGAS081973 Triticum aestivum FGAS: L... 48 6e-004
gb|AY290727.1| Triticum aestivum putative cytochrome P450-l... 48 6e-004
gb|BE606884.1|BE606884 WHE0902_C01_E02ZS Wheat 5-15 DAP spi... 46 0.003
gb|CD891929.1|CD891929 G118.118P11F010724 G118 Triticum aes... 46 0.003
gb|CD909392.1|CD909392 G468.112I08F010820 G468 Triticum aes... 46 0.003
gb|CV774745.1|CV774745 FGAS069145 Triticum aestivum FGAS: L... 46 0.003
gb|BE592027.1|BE592027 WHE1651-1654_F21_F21ZS Wheat heat st... 44 0.010
gb|AL821861.1|AL821861 AL821861 N:130 Triticum aestivum cDN... 44 0.010
gb|CA625063.1|CA625063 wl1n.pk0127.a9 wl1n Triticum aestivu... 44 0.010
gb|CA629400.1|CA629400 wle1n.pk0025.b9 wle1n Triticum aesti... 44 0.010
gb|CA631076.1|CA631076 wle1n.pk0043.g7 wle1n Triticum aesti... 44 0.010
gb|CA631650.1|CA631650 wle1n.pk0051.c5 wle1n Triticum aesti... 44 0.010
gb|CA632740.1|CA632740 wle1n.pk0060.c7 wle1n Triticum aesti... 44 0.010
gb|CA676257.1|CA676257 wrsu1.pk0003.g10 wrsu1 Triticum aest... 44 0.010
gb|CA676299.1|CA676299 wrsu1.pk0002.b1 wrsu1 Triticum aesti... 44 0.010
gb|CA720040.1|CA720040 wkm2n.pk006.f22 wkm2n Triticum aesti... 44 0.010
gb|CD887198.1|CD887198 G118.104I08F010605 G118 Triticum aes... 44 0.010
gb|CD896743.1|CD896743 G174.103N07F010822 G174 Triticum aes... 44 0.010
gb|BJ248023.1|BJ248023 BJ248023 Y. Ogihara unpublished cDNA... 42 0.040
gb|BJ253837.1|BJ253837 BJ253837 Y. Ogihara unpublished cDNA... 42 0.040
gb|BJ253869.1|BJ253869 BJ253869 Y. Ogihara unpublished cDNA... 42 0.040
gb|BJ254150.1|BJ254150 BJ254150 Y. Ogihara unpublished cDNA... 42 0.040
gb|BJ294119.1|BJ294119 BJ294119 Y. Ogihara unpublished cDNA... 42 0.040
gb|BQ238416.1|BQ238416 TaE05004D07F TaE05 Triticum aestivum... 42 0.040
gb|CD869699.1|CD869699 AZO2.112F15R010521 AZO2 Triticum aes... 42 0.040
gb|CD882610.1|CD882610 F1.110H08F010531 F1 Triticum aestivu... 42 0.040
gb|BJ248424.1|BJ248424 BJ248424 Y. Ogihara unpublished cDNA... 40 0.16
gb|BJ254575.1|BJ254575 BJ254575 Y. Ogihara unpublished cDNA... 40 0.16
gb|BJ283932.1|BJ283932 BJ283932 Y. Ogihara unpublished cDNA... 40 0.16
gb|BQ161909.1|BQ161909 WHE0485_b03_d05zT Wheat Fusarium gra... 40 0.16
gb|CA631632.1|CA631632 wle1n.pk0051.e5 wle1n Triticum aesti... 40 0.16
gb|CA638375.1|CA638375 wre1n.pk0009.a3 wre1n Triticum aesti... 40 0.16
gb|CA660516.1|CA660516 wlm1.pk0020.h12 wlm1 Triticum aestiv... 40 0.16
gb|CA668708.1|CA668708 wlsu1.pk021.p13 wlsu1 Triticum aesti... 40 0.16
gb|CA669545.1|CA669545 wlsu1.pk022.m16 wlsu1 Triticum aesti... 40 0.16
gb|CA669695.1|CA669695 wlsu1.pk022.n20 wlsu1 Triticum aesti... 40 0.16
gb|CA669736.1|CA669736 wlsu1.pk022.p20 wlsu1 Triticum aesti... 40 0.16
gb|CA670254.1|CA670254 wlsu1.pk026.e17 wlsu1 Triticum aesti... 40 0.16
gb|CA670577.1|CA670577 wlsu1.pk027.m24 wlsu1 Triticum aesti... 40 0.16
gb|CA670682.1|CA670682 wlsu1.pk027.h5 wlsu1 Triticum aestiv... 40 0.16
gb|CD866688.1|CD866688 AZO2.104C13F010112 AZO2 Triticum aes... 40 0.16
gb|CD873767.1|CD873767 AZO3.100J20R011123 AZO3 Triticum aes... 40 0.16
gb|CD883671.1|CD883671 F1.114B05R010702 F1 Triticum aestivu... 40 0.16
gb|AY485938.1| Triticum aestivum P450 mRNA, complete cds 40 0.16
gb|AY485940.1| Triticum aestivum P450 mRNA, complete cds 40 0.16
gb|AY485936.1| Triticum aestivum P450 gene, complete cds 40 0.16
dbj|AB124854.1| Triticum aestivum CYP71C6v2 mRNA for P450, ... 40 0.16
>gb|BJ271702.1|BJ271702 BJ271702 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh27c07 5', mRNA sequence
Length = 620
Score = 161 bits (81), Expect = 6e-038
Identities = 200/240 (83%)
Strand = Plus / Minus
Query: 285 ccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacgt 344
|||||||||||||||||||| ||| |||||||||| ||| | || ||||||||||| |
Sbjct: 518 ccagtcgaagtggaacagcagcgccgcgagcgcgagctccacgtgcgccagcccgaaagc 459
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtctgccccctt 404
|||||||||||| |||| || |||| | |||||||| | |||||||||||| ||||||||
Sbjct: 458 catgccggggcatatcctcctcccgccgccgaacggcacgaactcgaagtccgccccctt 399
Query: 405 gaagtccctggtactctgctcgaacctttccggcaagaacttgncgggctcgtcccaggg 464
||||||||| |||||||||||| ||||| ||||| |||| | |||||| |
Sbjct: 398 gaagtccctcccgttctgctcgaaccgctccggtgcgaactcctcgggtgcctcccagtg 339
Query: 465 ggccgggtccctgccgatcgcccacgcgttcacgatcaccgtgatgcccgccggcacgtc 524
||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||
Sbjct: 338 cgccgggtccatgccgatcgcccacgcgttcacgatcaccatgaccccctccggcacgtc 279
>gb|BJ276920.1|BJ276920 BJ276920 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh27c07 3', mRNA sequence
Length = 654
Score = 161 bits (81), Expect = 6e-038
Identities = 200/240 (83%)
Strand = Plus / Plus
Query: 285 ccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacgt 344
|||||||||||||||||||| ||| |||||||||| ||| | || ||||||||||| |
Sbjct: 146 ccagtcgaagtggaacagcagcgccgcgagcgcgagctccacgtgcgccagcccgaaagc 205
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtctgccccctt 404
|||||||||||| |||| || |||| | |||||||| | |||||||||||| ||||||||
Sbjct: 206 catgccggggcatatcctcctcccgccgccgaacggcacgaactcgaagtccgccccctt 265
Query: 405 gaagtccctggtactctgctcgaacctttccggcaagaacttgncgggctcgtcccaggg 464
||||||||| |||||||||||| ||||| ||||| |||| | |||||| |
Sbjct: 266 gaagtccctcccgttctgctcgaaccgctccggtgcgaactcctcgggtgcctcccagtg 325
Query: 465 ggccgggtccctgccgatcgcccacgcgttcacgatcaccgtgatgcccgccggcacgtc 524
||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||
Sbjct: 326 cgccgggtccatgccgatcgcccacgcgttcacgatcaccatgaccccctccggcacgtc 385
>gb|CD877581.1|CD877581 AZO4.100K04F010925 AZO4 Triticum aestivum cDNA clone AZO4100K04,
mRNA sequence
Length = 746
Score = 91.7 bits (46), Expect = 5e-017
Identities = 88/102 (86%)
Strand = Plus / Minus
Query: 309 ggcgagcgcgatctcgatatgagccagcccgaacgtcatgccggggcagatccgccgccc 368
||||||||||| ||| || | ||||||||||||| ||| |||||||| |||||||||||
Sbjct: 642 ggcgagcgcgagctccatgttggccagcccgaacgccatcccggggcacatccgccgccc 583
Query: 369 ggcaccgaacggtatgaactcgaagtctgcccccttgaagtc 410
||| |||||||| ||| |||||||||| | |||||||||||
Sbjct: 582 ggcgccgaacgggatgtactcgaagtccgtgcccttgaagtc 541
Score = 89.7 bits (45), Expect = 2e-016
Identities = 78/89 (87%)
Strand = Plus / Minus
Query: 456 gtcccagggggccgggtccctgccgatcgcccacgcgttcacgatcaccgtgatgcccgc 515
||||||| | ||||||||||||||||||||||||||||| |||| |||| || ||||||
Sbjct: 495 gtcccagtgcgccgggtccctgccgatcgcccacgcgttgacgagcaccatggcgcccgc 436
Query: 516 cggcacgtcgtacccgagcacctggcacg 544
|||||||||| | ||||| ||| ||||||
Sbjct: 435 cggcacgtcgaagccgaggacccggcacg 407
>gb|CD877582.1|CD877582 AZO4.100K04R011122 AZO4 Triticum aestivum cDNA clone AZO4100K04,
mRNA sequence
Length = 728
Score = 91.7 bits (46), Expect = 5e-017
Identities = 88/102 (86%)
Strand = Plus / Plus
Query: 309 ggcgagcgcgatctcgatatgagccagcccgaacgtcatgccggggcagatccgccgccc 368
||||||||||| ||| || | ||||||||||||| ||| |||||||| |||||||||||
Sbjct: 533 ggcgagcgcgagctccatgttggccagcccgaacgccatcccggggcacatccgccgccc 592
Query: 369 ggcaccgaacggtatgaactcgaagtctgcccccttgaagtc 410
||| |||||||| ||| |||||||||| | |||||||||||
Sbjct: 593 ggcgccgaacgggatgtactcgaagtccgtgcccttgaagtc 634
>gb|CA654856.1|CA654856 wlm0.pk0008.e3 wlm0 Triticum aestivum cDNA clone wlm0.pk0008.e3 5'
end, mRNA sequence
Length = 562
Score = 79.8 bits (40), Expect = 2e-013
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 449 cgggctcgtcccagggggccgggtccctgccgatcgcccacgcgttcacgatcaccgtga 508
||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 309 cgggcgcgtcccagtacgccgggtccatgccgatcgcccacgcgttcacgatcaccatga 250
Query: 509 tgcccgccggcacgtc 524
||| ||||||||||
Sbjct: 249 ccccctccggcacgtc 234
>gb|BE423451.1|BE423451 WHE0064_C08_E16ZS Wheat endosperm cDNA library Triticum aestivum
cDNA clone WHE0064_C08_E16, mRNA sequence
Length = 584
Score = 75.8 bits (38), Expect = 3e-012
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 285 ccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacgt 344
||||||||||||| | |||| | |||||||| ||||||| || ||||| |||||||
Sbjct: 253 ccagtcgaagtggtagagcagcacggcgagcacgatctcaatgctggccagtccgaacgc 312
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtctgccccctt 404
|| ||| ||||||| || || || |||||||||||||||||||||||||| | ||||||
Sbjct: 313 caagccagggcagagcctgcggccagcaccgaacggtatgaactcgaagtccgtcccctt 372
Query: 405 ga 406
||
Sbjct: 373 ga 374
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 469 gggtccctgccgatcgcccacgcgttcacga 499
|||||||||||||||||||| || |||||||
Sbjct: 437 gggtccctgccgatcgcccatgcattcacga 467
>gb|BE424734.1|BE424734 WHE0089_H06_P11ZS Wheat endosperm cDNA library Triticum aestivum
cDNA clone WHE0089_H06_P11, mRNA sequence
Length = 545
Score = 75.8 bits (38), Expect = 3e-012
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 285 ccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacgt 344
||||||||||||| | |||| | |||||||| ||||||| || ||||| |||||||
Sbjct: 250 ccagtcgaagtggtagagcagcacggcgagcacgatctcaatgctggccagtccgaacgc 309
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtctgccccctt 404
|| ||| ||||||| || || || |||||||||||||||||||||||||| | ||||||
Sbjct: 310 caagccagggcagagcctgcggccagcaccgaacggtatgaactcgaagtccgtcccctt 369
Query: 405 ga 406
||
Sbjct: 370 ga 371
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 469 gggtccctgccgatcgcccacgcgttcacga 499
|||||||||||||||||||| || |||||||
Sbjct: 434 gggtccctgccgatcgcccatgcattcacga 464
>gb|CD453896.1|CD453896 WHE0902_C01_E02ZT CS wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0902_C01_E02, mRNA sequence
Length = 691
Score = 75.8 bits (38), Expect = 3e-012
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 285 ccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacgt 344
||||||||||||| | |||| | |||||||| ||||||| || ||||| |||||||
Sbjct: 300 ccagtcgaagtggtagagcagcacggcgagcacgatctcaatgctggccagtccgaacgc 359
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtctgccccctt 404
|| ||| ||||||| || || || |||||||||||||||||||||||||| | ||||||
Sbjct: 360 caagccagggcagagcctgcggccagcaccgaacggtatgaactcgaagtccgtcccctt 419
Query: 405 ga 406
||
Sbjct: 420 ga 421
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 469 gggtccctgccgatcgcccacgcgttcacga 499
|||||||||||||||||||| || |||||||
Sbjct: 484 gggtccctgccgatcgcccatgcattcacga 514
>gb|CD894532.1|CD894532 G118.126H06R011119 G118 Triticum aestivum cDNA clone G118126H06,
mRNA sequence
Length = 563
Score = 75.8 bits (38), Expect = 3e-012
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 285 ccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacgt 344
||||||||||||| | |||| | |||||||| ||||||| || ||||| |||||||
Sbjct: 277 ccagtcgaagtggtagagcagcacggcgagcacgatctcaatgctggccagtccgaacgc 336
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtctgccccctt 404
|| ||| ||||||| || || || |||||||||||||||||||||||||| | ||||||
Sbjct: 337 caagccagggcagagcctgcggccagcaccgaacggtatgaactcgaagtccgtcccctt 396
Query: 405 ga 406
||
Sbjct: 397 ga 398
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 469 gggtccctgccgatcgcccacgcgttcacga 499
|||||||||||||||||||| || |||||||
Sbjct: 461 gggtccctgccgatcgcccatgcattcacga 491
>gb|CD898063.1|CD898063 G174.107P15R011120 G174 Triticum aestivum cDNA clone G174107P15,
mRNA sequence
Length = 699
Score = 75.8 bits (38), Expect = 3e-012
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 285 ccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacgt 344
||||||||||||| | |||| | |||||||| ||||||| || ||||| |||||||
Sbjct: 292 ccagtcgaagtggtagagcagcacggcgagcacgatctcaatgctggccagtccgaacgc 351
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtctgccccctt 404
|| ||| ||||||| || || || |||||||||||||||||||||||||| | ||||||
Sbjct: 352 caagccagggcagagcctgcggccagcaccgaacggtatgaactcgaagtccgtcccctt 411
Query: 405 ga 406
||
Sbjct: 412 ga 413
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 469 gggtccctgccgatcgcccacgcgttcacga 499
|||||||||||||||||||| || |||||||
Sbjct: 476 gggtccctgccgatcgcccatgcattcacga 506
>gb|CD900135.1|CD900135 G174.114J14F010824 G174 Triticum aestivum cDNA clone G174114J14,
mRNA sequence
Length = 482
Score = 75.8 bits (38), Expect = 3e-012
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 285 ccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacgt 344
||||||||||||| | |||| | |||||||| ||||||| || ||||| |||||||
Sbjct: 217 ccagtcgaagtggtagagcagcacggcgagcacgatctcaatgctggccagtccgaacgc 158
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtctgccccctt 404
|| ||| ||||||| || || || |||||||||||||||||||||||||| | ||||||
Sbjct: 157 caagccagggcagagcctgcggccagcaccgaacggtatgaactcgaagtccgtcccctt 98
Query: 405 ga 406
||
Sbjct: 97 ga 96
Score = 40.1 bits (20), Expect = 0.16
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 469 gggtccctgccgatcgccca 488
||||||||||||||||||||
Sbjct: 33 gggtccctgccgatcgccca 14
>gb|CD903608.1|CD903608 G356.110N04F010919 G356 Triticum aestivum cDNA clone G356110N04,
mRNA sequence
Length = 733
Score = 75.8 bits (38), Expect = 3e-012
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 285 ccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacgt 344
||||||||||||| | |||| | |||||||| ||||||| || ||||| |||||||
Sbjct: 516 ccagtcgaagtggtagagcagcacggcgagcacgatctcaatgctggccagtccgaacgc 457
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtctgccccctt 404
|| ||| ||||||| || || || |||||||||||||||||||||||||| | ||||||
Sbjct: 456 caagccagggcagagcctgcggccagcaccgaacggtatgaactcgaagtccgtcccctt 397
Query: 405 ga 406
||
Sbjct: 396 ga 395
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 469 gggtccctgccgatcgcccacgcgttcacga 499
|||||||||||||||||||| || |||||||
Sbjct: 332 gggtccctgccgatcgcccatgcattcacga 302
>gb|CD889905.1|CD889905 G118.113G13R010926 G118 Triticum aestivum cDNA clone G118113G13,
mRNA sequence
Length = 663
Score = 69.9 bits (35), Expect = 2e-010
Identities = 92/111 (82%)
Strand = Plus / Plus
Query: 285 ccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacgt 344
||||||||||||| | |||| | |||||||| ||||||| || ||||| |||||||
Sbjct: 280 ccagtcgaagtggtagagcagcacggcgagcacgatctcaatgctggccagtccgaacgc 339
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtc 395
|| ||| ||||||| || || || ||||||||||||||||||||||||||
Sbjct: 340 caagccagggcagagcctgcggccagcaccgaacggtatgaactcgaagtc 390
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 469 gggtccctgccgatcgcccacgcgttcacga 499
|||||||||||||||||||| || |||||||
Sbjct: 463 gggtccctgccgatcgcccatgcattcacga 493
>gb|CD893102.1|CD893102 G118.122N13R010927 G118 Triticum aestivum cDNA clone G118122N13,
mRNA sequence
Length = 658
Score = 69.9 bits (35), Expect = 2e-010
Identities = 92/111 (82%)
Strand = Plus / Plus
Query: 285 ccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacgt 344
||||||||||||| | |||| | |||||||| ||||||| || ||||| |||||||
Sbjct: 255 ccagtcgaagtggtagagcagcacggcgagcacgatctcaatgctggccagtccgaacgc 314
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtc 395
|| ||| ||||||| || || || ||||||||||||||||||||||||||
Sbjct: 315 caagccagggcagagcctgcggccagcaccgaacggtatgaactcgaagtc 365
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 469 gggtccctgccgatcgcccacgcgttcacga 499
|||||||||||||||||||| || |||||||
Sbjct: 439 gggtccctgccgatcgcccatgcattcacga 469
>gb|BE398830.1|BE398830 WHE0026.F05F990702 ITEC WHE Wheat Endosperm Library Triticum
aestivum cDNA clone WHE0026.F05, mRNA sequence
Length = 412
Score = 67.9 bits (34), Expect = 7e-010
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 285 ccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacgt 344
||||||||||||| | |||| | |||| ||| ||||||| | || |||||||||||||
Sbjct: 206 ccagtcgaagtggtaaagcagcacggccagcacgatctcattttgggccagcccgaacgc 265
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtctgccccctt 404
|| ||| ||||||| || ||||| || || ||||||||||||||||| || | ||||||
Sbjct: 266 caagccagggcagagcctgcgcccagccccaaacggtatgaactcgaaatccgtcccctt 325
Query: 405 ga 406
||
Sbjct: 326 ga 327
Score = 40.1 bits (20), Expect = 0.16
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 469 gggtccctgccgatcgccca 488
||||||||||||||||||||
Sbjct: 390 gggtccctgccgatcgccca 409
>gb|CD886570.1|CD886570 G118.102K12F010601 G118 Triticum aestivum cDNA clone G118102K12,
mRNA sequence
Length = 655
Score = 61.9 bits (31), Expect = 4e-008
Identities = 103/127 (81%)
Strand = Plus / Minus
Query: 284 tccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacg 343
|||||||||||||| ||| || || |||||| | ||||| |||| ||| || | ||||
Sbjct: 346 tccagtcgaagtggtacaacagtgcagcgagcacaatctccatattggcctgcgcaaacg 287
Query: 344 tcatgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtctgccccct 403
| ||||| ||||| |||| |||||||||||| ||||| | ||||||||||| | ||||
Sbjct: 286 tgatgcccgggcatatcctccgcccggcaccaaacggaacaaactcgaagtcggtgccct 227
Query: 404 tgaagtc 410
|||||||
Sbjct: 226 tgaagtc 220
Score = 54.0 bits (27), Expect = 1e-005
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 468 cgggtccctgccgatcgcccacgcgttcacgatcaccgtgatgcccgccggcacgtcgta 527
||||||||||| ||||||||| ||||| |||| ||| ||| ||||| |||||||||||
Sbjct: 162 cgggtccctgctgatcgcccatgcgttgacgaacacggtggtgcccttgggcacgtcgta 103
Query: 528 ccc 530
|||
Sbjct: 102 ccc 100
>gb|BE398785.1|BE398785 WHE0025.F11F990702 ITEC WHE Wheat Endosperm Library Triticum
aestivum cDNA clone WHE0025.F11, mRNA sequence
Length = 362
Score = 60.0 bits (30), Expect = 2e-007
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 337 ccgaacgtcatgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtct 396
||||||| || ||| ||||||| || || || ||||||||||||||||||||||||||
Sbjct: 279 ccgaacgccaagccagggcagagcctgcggccagcaccgaacggtatgaactcgaagtcc 338
Query: 397 gcccccttga 406
| ||||||||
Sbjct: 339 gtccccttga 348
>gb|BE430555.1|BE430555 SUN004.B07R991213 ITEC SUN Wheat cDNA Library Triticum aestivum
cDNA clone SUN004.B07, mRNA sequence
Length = 650
Score = 60.0 bits (30), Expect = 2e-007
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 285 ccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacgt 344
||||||||||||| | |||| | |||| ||| ||||||| || |||||||||||||
Sbjct: 320 ccagtcgaagtggtagagcagcacggccagcacgatctcaatgctggccagcccgaacgc 379
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtctgccccctt 404
|| ||| ||||||| || ||||| || || ||||||||||||||||| || | ||||||
Sbjct: 380 caagccagggcagagcctgcgcccagccccaaacggtatgaactcgaaatccgtcccctt 439
Query: 405 ga 406
||
Sbjct: 440 ga 441
Score = 40.1 bits (20), Expect = 0.16
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 469 gggtccctgccgatcgccca 488
||||||||||||||||||||
Sbjct: 504 gggtccctgccgatcgccca 523
>gb|BQ236556.1|BQ236556 TaE05029H11F TaE05 Triticum aestivum cDNA clone TaE05029H11F, mRNA
sequence
Length = 595
Score = 60.0 bits (30), Expect = 2e-007
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 285 ccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacgt 344
||||||||||||| | |||| | |||| ||| ||||||| || |||||||||||||
Sbjct: 273 ccagtcgaagtggtagagcagcacggccagcacgatctcaatgctggccagcccgaacgc 332
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtctgccccctt 404
|| ||| ||||||| || ||||| || || ||||||||||||||||| || | ||||||
Sbjct: 333 caagccagggcagagcctgcgcccagccccaaacggtatgaactcgaaatccgtcccctt 392
Query: 405 ga 406
||
Sbjct: 393 ga 394
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 469 gggtccctgccgatcgcccacgcgttcacga 499
|||||||||||||||||||| || |||||||
Sbjct: 457 gggtccctgccgatcgcccatgcattcacga 487
>gb|BQ238476.1|BQ238476 TaE05003F08F TaE05 Triticum aestivum cDNA clone TaE05003F08F, mRNA
sequence
Length = 569
Score = 60.0 bits (30), Expect = 2e-007
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 285 ccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacgt 344
||||||||||||| | |||| | |||| ||| ||||||| || |||||||||||||
Sbjct: 270 ccagtcgaagtggtagagcagcacggccagcacgatctcaatgctggccagcccgaacgc 329
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtctgccccctt 404
|| ||| ||||||| || ||||| || || ||||||||||||||||| || | ||||||
Sbjct: 330 caagccagggcagagcctgcgcccagccccaaacggtatgaactcgaaatccgtcccctt 389
Query: 405 ga 406
||
Sbjct: 390 ga 391
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 469 gggtccctgccgatcgcccacgcgttcacga 499
|||||||||||||||||||| || |||||||
Sbjct: 454 gggtccctgccgatcgcccatgcattcacga 484
>gb|CA710529.1|CA710529 wdk2c.pk017.o17 wdk2c Triticum aestivum cDNA clone wdk2c.pk017.o17
5' end, mRNA sequence
Length = 466
Score = 60.0 bits (30), Expect = 2e-007
Identities = 99/122 (81%)
Strand = Plus / Minus
Query: 285 ccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacgt 344
||||||||||||| | |||| | |||| ||| ||||||| || |||||||||||||
Sbjct: 240 ccagtcgaagtggtagagcagcacggccagcacgatctcaatgctggccagcccgaacgc 181
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtctgccccctt 404
|| ||| ||||||| || ||||| || || ||||||||||||||||| || | ||||||
Sbjct: 180 caagccagggcagagcctgcgcccagccccaaacggtatgaactcgaaatccgtcccctt 121
Query: 405 ga 406
||
Sbjct: 120 ga 119
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 469 gggtccctgccgatcgcccacgcgttcacga 499
|||||||||||||||||||| || |||||||
Sbjct: 56 gggtccctgccgatcgcccatgcattcacga 26
>gb|BQ167358.1|BQ167358 WHE0064_B09_C18ZK Cheyenne wheat endosperm cDNA library Triticum
aestivum cDNA clone WHE0064_B09_C18, mRNA sequence
Length = 441
Score = 60.0 bits (30), Expect = 2e-007
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 285 ccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacgt 344
||||||||||||| | |||| | |||| ||| ||||||| || |||||||||||||
Sbjct: 287 ccagtcgaagtggtagagcagcacggccagcacgatctcaatgctggccagcccgaacgc 346
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtctgccccctt 404
|| ||| ||||||| || ||||| || || ||||||||||||||||| || | ||||||
Sbjct: 347 caagccagggcagagcctgcgcccagccccaaacggtatgaactcgaaatccgtcccctt 406
Query: 405 ga 406
||
Sbjct: 407 ga 408
>gb|CD453954.1|CD453954 WHE0927_E09_J17ZT CS wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0927_E09_J17, mRNA sequence
Length = 727
Score = 60.0 bits (30), Expect = 2e-007
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 285 ccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacgt 344
||||||||||||| | |||| | |||||||| ||||||| || ||||| |||||||
Sbjct: 287 ccagtcgaagtggtagagcagcacggcgagcacgatctcaatgctggccagtccgaacgc 346
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtctgccccctt 404
|| ||| ||||||| || || || || || |||||||||||||||||||| | ||||||
Sbjct: 347 caggccagggcagagcctgcggccagccccaaacggtatgaactcgaagtccgtcccctt 406
Query: 405 ga 406
||
Sbjct: 407 ga 408
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 469 gggtccctgccgatcgcccacgcgttcacga 499
|||||||||||||||||||| || |||||||
Sbjct: 471 gggtccctgccgatcgcccatgcattcacga 501
>gb|CD895568.1|CD895568 G174.100D07R011119 G174 Triticum aestivum cDNA clone G174100D07,
mRNA sequence
Length = 611
Score = 60.0 bits (30), Expect = 2e-007
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 285 ccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacgt 344
||||||||||||| | |||| | |||| ||| ||||||| || |||||||||||||
Sbjct: 270 ccagtcgaagtggtagagcagcacggccagcacgatctcaatgctggccagcccgaacgc 329
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtctgccccctt 404
|| ||| ||||||| || ||||| || || ||||||||||||||||| || | ||||||
Sbjct: 330 caagccagggcagagcctgcgcccagccccaaacggtatgaactcgaaatccgtcccctt 389
Query: 405 ga 406
||
Sbjct: 390 ga 391
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 469 gggtccctgccgatcgcccacgcgttcacga 499
|||||||||||||||||||| || |||||||
Sbjct: 454 gggtccctgccgatcgcccatgcattcacga 484
>gb|CD907549.1|CD907549 G468.107F01R010929 G468 Triticum aestivum cDNA clone G468107F01,
mRNA sequence
Length = 591
Score = 60.0 bits (30), Expect = 2e-007
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 285 ccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacgt 344
||||||||||||| | |||| | |||| ||| ||||||| || |||||||||||||
Sbjct: 282 ccagtcgaagtggtagagcagcacggccagcacgatctcaatgctggccagcccgaacgc 341
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtctgccccctt 404
|| ||| ||||||| || ||||| || || ||||||||||||||||| || | ||||||
Sbjct: 342 caagccagggcagagcctgcgcccagccccaaacggtatgaactcgaaatccgtcccctt 401
Query: 405 ga 406
||
Sbjct: 402 ga 403
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 469 gggtccctgccgatcgcccacgcgttcacga 499
|||||||||||||||||||| || |||||||
Sbjct: 466 gggtccctgccgatcgcccatgcattcacga 496
>gb|CD909393.1|CD909393 G468.112I08R010929 G468 Triticum aestivum cDNA clone G468112I08,
mRNA sequence
Length = 574
Score = 60.0 bits (30), Expect = 2e-007
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 285 ccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacgt 344
||||||||||||| | |||| | |||| ||| ||||||| || |||||||||||||
Sbjct: 269 ccagtcgaagtggtagagcagcacggccagcacgatctcaatgctggccagcccgaacgc 328
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtctgccccctt 404
|| ||| ||||||| || ||||| || || ||||||||||||||||| || | ||||||
Sbjct: 329 caagccagggcagagcctgcgcccagccccaaacggtatgaactcgaaatccgtcccctt 388
Query: 405 ga 406
||
Sbjct: 389 ga 390
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 469 gggtccctgccgatcgcccacgcgttcacga 499
|||||||||||||||||||| || |||||||
Sbjct: 453 gggtccctgccgatcgcccatgcattcacga 483
>gb|BJ294999.1|BJ294999 BJ294999 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl1b17 3', mRNA sequence
Length = 361
Score = 58.0 bits (29), Expect = 7e-007
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 331 gccagcccgaacgtcatgccggggcagatccgccgcccggcaccgaacggtatgaactcg 390
|||| ||||| || |||||||||||| |||| ||| ||||| ||||| || | |||||||
Sbjct: 266 gccatcccgagcgacatgccggggcacatcctccggccggctccgaaggggaggaactcg 325
Query: 391 aagtctgcccccttgaa 407
||||| || ||||||||
Sbjct: 326 aagtcggcgcccttgaa 342
>gb|BE423441.1|BE423441 WHE0064_B09_C18ZS Wheat endosperm cDNA library Triticum aestivum
cDNA clone WHE0064_B09_C18, mRNA sequence
Length = 418
Score = 56.0 bits (28), Expect = 3e-006
Identities = 88/108 (81%)
Strand = Plus / Minus
Query: 285 ccagtcgaagtggaacagcaacgcggcgagcgcgatctcgatatgagccagcccgaacgt 344
||||||||||||| | |||| | |||| ||| ||||||| || |||||||||||||
Sbjct: 144 ccagtcgaagtggtagagcagcacggccagcacgatctcaatgctggccagcccgaacgc 85
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaa 392
|| ||| ||||||| || ||||| || || |||||||||||||||||
Sbjct: 84 caagccagggcagagcctgcgcccagccccaaacggtatgaactcgaa 37
>gb|BG314191.1|BG314191 WHE2460_D08_G16ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2460_D08_G16,
mRNA sequence
Length = 538
Score = 56.0 bits (28), Expect = 3e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 331 gccagcccgaacgtcatgccggggcagatccgccgcccggcaccgaacggtatgaactcg 390
|||| ||||| || |||||||||||| |||| ||| || || ||||| || | |||||||
Sbjct: 276 gccatcccgagcgacatgccggggcacatcctccggccagctccgaaggggaggaactcg 335
Query: 391 aagtctgcccccttgaagtc 410
||||| || |||||||||||
Sbjct: 336 aagtcggcgcccttgaagtc 355
>gb|BQ238536.1|BQ238536 TaE05002H09F TaE05 Triticum aestivum cDNA clone TaE05002H09F, mRNA
sequence
Length = 415
Score = 56.0 bits (28), Expect = 3e-006
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 331 gccagcccgaacgtcatgccggggcagatccgccgcccggcaccgaacggtatgaactcg 390
||||||||||||| || ||| ||||||| || ||||| || || |||||||||||||||
Sbjct: 228 gccagcccgaacgccaagccagggcagagcctgcgcccagccccaaacggtatgaactcg 287
Query: 391 aagtctgcccccttga 406
|| || | ||||||||
Sbjct: 288 aaatccgtccccttga 303
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 469 gggtccctgccgatcgcccacgcgttcacga 499
|||||||||||||||||||| || |||||||
Sbjct: 366 gggtccctgccgatcgcccatgcattcacga 396
>gb|CD886706.1|CD886706 G118.103A21F010605 G118 Triticum aestivum cDNA clone G118103A21,
mRNA sequence
Length = 504
Score = 56.0 bits (28), Expect = 3e-006
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 349 ccggggcagatccgccgcccggcaccgaacgg 380
||||||||||||||||||||||| ||||||||
Sbjct: 336 ccggggcagatccgccgcccggcgccgaacgg 305
Score = 44.1 bits (22), Expect = 0.010
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 472 tccctgccgatcgcccacgcgttcac 497
||||| ||||||||||||||||||||
Sbjct: 198 tccctcccgatcgcccacgcgttcac 173
>gb|CD886707.1|CD886707 G118.103A21R010921 G118 Triticum aestivum cDNA clone G118103A21,
mRNA sequence
Length = 518
Score = 56.0 bits (28), Expect = 3e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 349 ccggggcagatccgccgcccggcaccgaacgg 380
||||||||||||||||||||||| ||||||||
Sbjct: 357 ccggggcagatccgccgcccggcgccgaacgg 388
Score = 40.1 bits (20), Expect = 0.16
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 472 tccctgccgatcgcccacgcgttc 495
||||| ||||||||||||||||||
Sbjct: 495 tccctcccgatcgcccacgcgttc 518
>gb|BJ253107.1|BJ253107 BJ253107 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf27g02 3', mRNA sequence
Length = 682
Score = 52.0 bits (26), Expect = 4e-005
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 345 catgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtctgccccctt 404
|||||||||||| |||| ||| || || |||||||| | ||||||||| || || |||||
Sbjct: 371 catgccggggcacatcctccggccagctccgaacgggaggaactcgaaatcggcgccctt 430
Query: 405 gaagtc 410
||||||
Sbjct: 431 gaagtc 436
>gb|BJ288719.1|BJ288719 BJ288719 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl1b17 5', mRNA sequence
Length = 391
Score = 52.0 bits (26), Expect = 4e-005
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 331 gccagcccgaacgtcatgccggggcagatccgccgcccggcaccgaacggtatgaactcg 390
|||| ||||| || |||||||||||| |||| ||| ||||| ||||| || | |||||||
Sbjct: 94 gccatcccgagcgacatgccggggcacatcctccggccggctccgaaggggaggaactcg 35
Query: 391 aagtctgccccctt 404
||||| || |||||
Sbjct: 34 aagtcggcgccctt 21
>gb|CA612615.1|CA612615 wr1.pk0137.d10 wr1 Triticum aestivum cDNA clone wr1.pk0137.d10 5'
end, mRNA sequence
Length = 462
Score = 52.0 bits (26), Expect = 4e-005
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 349 ccggggcagatccgccgcccggcaccgaacggtatgaactcgaagt 394
|||||||| ||||| || ||||| ||||||||||||||||| ||||
Sbjct: 310 ccggggcaaatccgacgaccggcgccgaacggtatgaactcaaagt 265
>gb|CA650713.1|CA650713 wre1n.pk184.c3 wre1n Triticum aestivum cDNA clone wre1n.pk184.c3 5'
end, mRNA sequence
Length = 504
Score = 52.0 bits (26), Expect = 4e-005
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 349 ccggggcagatccgccgcccggcaccgaacggtatgaactcgaagt 394
|||||||| ||||| || ||||| ||||||||||||||||| ||||
Sbjct: 251 ccggggcaaatccgacgaccggcgccgaacggtatgaactcaaagt 206
>gb|CD898062.1|CD898062 G174.107P15F010823 G174 Triticum aestivum cDNA clone G174107P15,
mRNA sequence
Length = 535
Score = 52.0 bits (26), Expect = 4e-005
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 337 ccgaacgtcatgccggggcagatccgccgcccggcaccgaacggtatgaactcgaagtct 396
||||||| || ||| ||||||| || || || |||||| |||||||||||||||||||
Sbjct: 527 ccgaacgccaagccagggcagagcctgcggccagcaccggacggtatgaactcgaagtcc 468
Query: 397 gcccccttga 406
| ||||||||
Sbjct: 467 gtccccttga 458
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 469 gggtccctgccgatcgcccacgcgttcacga 499
|||||||||||||||||||| || |||||||
Sbjct: 395 gggtccctgccgatcgcccatgcattcacga 365
>gb|CA696987.1|CA696987 wlk4.pk0007.c1 wlk4 Triticum aestivum cDNA clone wlk4.pk0007.c1 5'
end, mRNA sequence
Length = 639
Score = 50.1 bits (25), Expect = 2e-004
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 336 cccgaacgtcatgccggggcagatccgccgcccggcaccgaacggtat 383
|||||||| ||| |||||| | ||||||||||||| |||||||||||
Sbjct: 313 cccgaacgccatcccggggnaattccgccgcccggcgccgaacggtat 360
>gb|CD895567.1|CD895567 G174.100D07F010705 G174 Triticum aestivum cDNA clone G174100D07,
mRNA sequence
Length = 548
Score = 50.1 bits (25), Expect = 2e-004
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 331 gccagcccgaacgtcatgccggggcagatccgccgcccggcaccgaacggtatgaactcg 390
||||||||| ||| || ||| ||||||| || ||||| || ||||||||||||||||||
Sbjct: 527 gccagcccgtacgccaagccagggcagagcctgcgcccagccccgaacggtatgaactcg 468
Query: 391 a 391
|
Sbjct: 467 a 467
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 469 gggtccctgccgatcgcccacgcgttcacga 499
|||||||||||||||||||| || |||||||
Sbjct: 389 gggtccctgccgatcgcccatgcattcacga 359
>gb|BJ220806.1|BJ220806 BJ220806 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh21n07 3', mRNA sequence
Length = 531
Score = 48.1 bits (24), Expect = 6e-004
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 352 gggcagatccgccgcccggcaccgaacggtat 383
||||||||||||||||| || |||||||||||
Sbjct: 459 gggcagatccgccgccccgccccgaacggtat 490
>gb|AL828759.1|AL828759 AL828759 p:739 Triticum aestivum cDNA clone B06_p739_plate_9, mRNA
sequence
Length = 491
Score = 48.1 bits (24), Expect = 6e-004
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 352 gggcagatccgccgcccggcaccgaacggtat 383
||||||||||||||||| || |||||||||||
Sbjct: 41 gggcagatccgccgccccgccccgaacggtat 10
>gb|CA484859.1|CA484859 WHE4311_E05_J09ZS Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4311_E05_J09, mRNA sequence
Length = 672
Score = 48.1 bits (24), Expect = 6e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 349 ccggggcagatccgccgcccggcaccgaacggtatgaact 388
||||||||||||| || |||||||||||||| |||||||
Sbjct: 489 ccggggcagatcctcctaccggcaccgaacgggatgaact 450
Score = 42.1 bits (21), Expect = 0.040
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 466 gccgggtccctgccgatcgcccacgcgtt 494
||||||||||| |||||||||||| ||||
Sbjct: 366 gccgggtccctcccgatcgcccacacgtt 338
>gb|CA597442.1|CA597442 wpa1c.pk015.a12 wpa1c Triticum aestivum cDNA clone wpa1c.pk015.a12
5' end, mRNA sequence
Length = 615
Score = 48.1 bits (24), Expect = 6e-004
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 352 gggcagatccgccgcccggcaccgaacggtat 383
||||||||||||||||| || |||||||||||
Sbjct: 305 gggcagatccgccgccccgccccgaacggtat 274
>gb|CA728880.1|CA728880 wdi1c.pk005.l7 wdi1c Triticum aestivum cDNA clone wdi1c.pk005.l7 5'
end, mRNA sequence
Length = 582
Score = 48.1 bits (24), Expect = 6e-004
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 352 gggcagatccgccgcccggcaccgaacggtat 383
||||||||||||||||| || |||||||||||
Sbjct: 454 gggcagatccgccgccccgccccgaacggtat 423
>gb|CD877818.1|CD877818 AZO4.101D04R011121 AZO4 Triticum aestivum cDNA clone AZO4101D04,
mRNA sequence
Length = 771
Score = 48.1 bits (24), Expect = 6e-004
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 345 catgccggggcagatccgccgcccggcaccgaacgg 380
|||||| ||||||| |||||||||||| ||||||||
Sbjct: 386 catgcccgggcagacccgccgcccggcgccgaacgg 421
Score = 42.1 bits (21), Expect = 0.040
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 466 gccgggtccctgccgatcgcccacgcgtt 494
||||||||||| |||| ||||||||||||
Sbjct: 522 gccgggtccctcccgagcgcccacgcgtt 550
>gb|CD891122.1|CD891122 G118.116E11F010723 G118 Triticum aestivum cDNA clone G118116E11,
mRNA sequence
Length = 748
Score = 48.1 bits (24), Expect = 6e-004
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 352 gggcagatccgccgcccggcaccgaacggtat 383
||||||||||||||||| || |||||||||||
Sbjct: 257 gggcagatccgccgccccgccccgaacggtat 226
>gb|CD891123.1|CD891123 G118.116E11R010926 G118 Triticum aestivum cDNA clone G118116E11,
mRNA sequence
Length = 622
Score = 48.1 bits (24), Expect = 6e-004
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 352 gggcagatccgccgcccggcaccgaacggtat 383
||||||||||||||||| || |||||||||||
Sbjct: 492 gggcagatccgccgccccgccccgaacggtat 523
>gb|CD891893.1|CD891893 G118.118N15F010724 G118 Triticum aestivum cDNA clone G118118N15,
mRNA sequence
Length = 597
Score = 48.1 bits (24), Expect = 6e-004
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 352 gggcagatccgccgcccggcaccgaacggtat 383
||||||||||||||||| || |||||||||||
Sbjct: 282 gggcagatccgccgccccgccccgaacggtat 251
>gb|CD891894.1|CD891894 G118.118N15R010926 G118 Triticum aestivum cDNA clone G118118N15,
mRNA sequence
Length = 667
Score = 48.1 bits (24), Expect = 6e-004
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 352 gggcagatccgccgcccggcaccgaacggtat 383
||||||||||||||||| || |||||||||||
Sbjct: 483 gggcagatccgccgccccgccccgaacggtat 514
>gb|CD897738.1|CD897738 G174.106P08R011120 G174 Triticum aestivum cDNA clone G174106P08,
mRNA sequence
Length = 757
Score = 48.1 bits (24), Expect = 6e-004
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 352 gggcagatccgccgcccggcaccgaacggtat 383
||||||||||||||||| || |||||||||||
Sbjct: 451 gggcagatccgccgccccgccccgaacggtat 482
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 111,159
Number of Sequences: 636343
Number of extensions: 111159
Number of successful extensions: 31056
Number of sequences better than 0.5: 103
Number of HSP's better than 0.5 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 30838
Number of HSP's gapped (non-prelim): 199
length of query: 554
length of database: 367,240,239
effective HSP length: 19
effective length of query: 535
effective length of database: 355,149,722
effective search space: 190005101270
effective search space used: 190005101270
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)