BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3712941.2.1
(1473 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK193343.1|CK193343 FGAS001757 Triticum aestivum FGAS: L... 430 e-118
gb|BJ258453.1|BJ258453 BJ258453 Y. Ogihara unpublished cDNA... 391 e-106
gb|CV761162.1|CV761162 FGAS055550 Triticum aestivum FGAS: L... 381 e-103
gb|BE516162.1|BE516162 WHE612_G07_N14ZA Wheat ABA-treated e... 323 2e-086
gb|BF474383.1|BF474383 WHE0843_D07_H13ZS Wheat vernalized c... 274 2e-071
gb|CA603443.1|CA603443 wr1.pk0024.c4 wr1 Triticum aestivum ... 220 2e-055
gb|CA639168.1|CA639168 wre1n.pk0023.c12 wre1n Triticum aest... 194 1e-047
gb|CN008072.1|CN008072 WHE2637_A09_A17ZE Wheat Fusarium gra... 186 3e-045
gb|CA618329.1|CA618329 wl1n.pk0032.b8 wl1n Triticum aestivu... 153 4e-035
gb|CA649516.1|CA649516 wre1n.pk0140.f1 wre1n Triticum aesti... 151 2e-034
gb|CD935094.1|CD935094 OV.002P18F010109 OV Triticum aestivu... 100 5e-019
gb|CD452497.1|CD452497 WHE1107_B01_D01ZT CS wheat etiolated... 96 8e-018
gb|CN012314.1|CN012314 WHE3895_C08_E15ZS Wheat Fusarium gra... 94 3e-017
gb|BE442892.1|BE442892 WHE1107_B01_D01ZS Wheat etiolated se... 86 8e-015
gb|BE444251.1|BE444251 WHE1117_A02_A03ZS Wheat etiolated se... 78 2e-012
gb|CA649917.1|CA649917 wre1n.pk0145.c1 wre1n Triticum aesti... 66 7e-009
gb|AY462115.1| Triticum aestivum annexin mRNA, complete cds 66 7e-009
gb|BJ228193.1|BJ228193 BJ228193 Y. Ogihara unpublished cDNA... 60 5e-007
gb|CA606157.1|CA606157 wr1.pk0063.c8 wr1 Triticum aestivum ... 58 2e-006
gb|DR735537.1|DR735537 FGAS081207 Triticum aestivum FGAS: L... 58 2e-006
gb|BE406539.1|BE406539 WHE0418_a08_a16zB Wheat etiolated se... 56 7e-006
gb|CV766772.1|CV766772 FGAS061159 Triticum aestivum FGAS: L... 56 7e-006
gb|CV776224.1|CV776224 FGAS070628 Triticum aestivum FGAS: L... 56 7e-006
gb|BJ287010.1|BJ287010 BJ287010 Y. Ogihara unpublished cDNA... 52 1e-004
gb|CA658387.1|CA658387 wlm0.pk041.o12 wlm0 Triticum aestivu... 52 1e-004
gb|BE415152.1|BE415152 MWL023.B06F991217 ITEC MWL Wheat Roo... 48 0.002
gb|CV522175.1|CV522175 RH-085 Triticum aestivum subtracted,... 48 0.002
gb|CV763663.1|CV763663 FGAS058046 Triticum aestivum FGAS: L... 48 0.002
gb|CV767735.1|CV767735 FGAS062126 Triticum aestivum FGAS: L... 48 0.002
gb|BE518038.1|BE518038 WHE0806_E09_I18ZS Wheat vernalized c... 46 0.007
gb|CD939676.1|CD939676 OV.114H20F010312 OV Triticum aestivu... 44 0.027
gb|BE426095.1|BE426095 WHE0328_G07_N14ZS Wheat unstressed s... 42 0.11
gb|BE444649.1|BE444649 WHE1137_A05_A09ZS Wheat etiolated se... 40 0.43
gb|BF429216.1|BF429216 WHE1709_H02_O03ZS Wheat heat stresse... 40 0.43
>gb|CK193343.1|CK193343 FGAS001757 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 789
Score = 430 bits (217), Expect = e-118
Identities = 537/643 (83%), Gaps = 3/643 (0%)
Strand = Plus / Plus
Query: 351 actgagattatatgttccaggacaccatcacagttgcaaataatgaaacagacttattat 410
||||| || |||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 114 actgatataatatgttccaggacaccatcacagctgcaaataatgaaacagacatattat 173
Query: 411 gctagattcggtacttatcttgagcatgacattgctcaccacacatccggtgatcaccag 470
|| | || |||||||||||||||||||||||| ||| || ||||||| ||||| |||
Sbjct: 174 gcaaagtttggtacttatcttgagcatgacattagtcagcaagcatccggcgatcatcag 233
Query: 471 aagcttttacttgcatatatggggattccacgctatgaaggtcccgaggttgatcctaca 530
||| | ||||| || ||| | || ||||||||||| ||||| || ||||||||||| ||
Sbjct: 234 aagatcttactagcctatgttggcattccacgctacgaaggcccggaggttgatcccact 293
Query: 531 attgtgacacatgatgcaaaggatttgtacaaagctggtgagaaaaggctgggtacggac 590
|| |||||||||||||| ||||| | ||||||||||||||||||| |||||| || ||
Sbjct: 294 atagtgacacatgatgcgaaggacctctacaaagctggtgagaaaaagctgggcacagat 353
Query: 591 gagaagatttttatccgtgttttcactgaacgcagttgggcacacttggcatctgtttct 650
||||| | || ||||| | |||||||||||||| ||||||||| ||||| ||||| ||
Sbjct: 354 gagaaaaccttcatccgcatcttcactgaacgcagctgggcacacatggcagctgttgct 413
Query: 651 tctgcttaccatcatatgtatgaccggaaattagagaaggttatcaagagcgaaacttct 710
|||||||||||||| |||||||| ||| ||| |||||||| | |||| ||||| |||
Sbjct: 414 tctgcttaccatcacatgtatgatcggtcgttacagaaggttgtgaagaatgaaacatct 473
Query: 711 ggaaactttgaatttgcacttttgactatcctcagatgcgcggaaaacccagcaaagtat 770
|||||||||||| |||| || || |||||||||||||| || || || ||||| ||||||
Sbjct: 474 ggaaactttgaagttgctctgttaactatcctcagatgtgctgagaatccagcgaagtat 533
Query: 771 tttgctaagctcttacgaaaggccatgaaaggtttaggcactgatgacatgacacttata 830
||||||||| | || | ||| ||||||||||| |||| |||||||||| ||||||| ||
Sbjct: 534 tttgctaaggtgttgaggaagtccatgaaaggtctaggtactgatgacaagacacttgta 593
Query: 831 agggtggtggtgacgaggaccgagattgacatgcaatatatcaaggcagagtacttgaag 890
||||| ||||| || ||||| |||||||| ||||| |||||||||||||| || | |||
Sbjct: 594 agggttgtggtaacaaggactgagattgatatgcagtatatcaaggcagaatattacaag 653
Query: 891 aagtataagaagccattagctgaggctatcaactccgagacatcaggaaactatcggacg 950
|| || || ||||| |||||||| |||||| | ||||| |||||||| ||||||||
Sbjct: 654 aaatacaaaaagcctttagctgatgctatccattccgaaacatcaggcggttatcggaca 713
Query: 951 ttccttctttcacttgttggtcatggccattaggctatgtttc 993
||||| ||||| |||||||| | ||||||||||||||||||
Sbjct: 714 ttcctgctttctcttgttgg---tagccattaggctatgtttc 753
>gb|BJ258453.1|BJ258453 BJ258453 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh7o07 5', mRNA sequence
Length = 550
Score = 391 bits (197), Expect = e-106
Identities = 414/485 (85%), Gaps = 1/485 (0%)
Strand = Plus / Plus
Query: 27 cggcgatggcgagcctcaccctgccgccggcgccccccaacccacgccaggacgccatcg 86
|||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||
Sbjct: 67 cggcaatggcgagcctcaccttgccgccggcgccccctaacccccgccaggacgccatcg 126
Query: 87 acctccacaaggccttcaaagggtttggatgtgacagtacaacagggataaacatactta 146
|||||||||||||||||||||||||||| ||||| | |||||||| ||| ||||||
Sbjct: 127 acctccacaaggccttcaaagggtttggctgtgatactacaacagtttcaaatatacttg 186
Query: 147 ctcatcgcgattcggggcagcgtggactcattcaacaggaatacagggtctatgtatcat 206
|||| || || || ||| |||||| ||||||||||||||||| |||||||| |
Sbjct: 187 ctcaccgtgactcaatgcaacgtggatacattcaacaggaatacaaaa-ctatgtattct 245
Query: 207 gaggaactctcccaccgtatttcatctgaactcagtggaaaccacaagaaagctatgtcg 266
|||||||| || | ||||| || ||||||||||||||||||||||||||||| |||||
Sbjct: 246 gaggaactttcacgtcgtatatcgtctgaactcagtggaaaccacaagaaagcactgtcg 305
Query: 267 ctgtggattcttgatcctgctggacgtgatgcaactgttttgagagaagctctaaatggt 326
|| ||||||||||||||||||||||||||||| |||||| ||| ||||||||||| || |
Sbjct: 306 ctctggattcttgatcctgctggacgtgatgcgactgttctgaaagaagctctaagtgct 365
Query: 327 gacactatggatctgagagcagccactgagattatatgttccaggacaccatcacagttg 386
|| | | | ||||||| |||||| ||||| || || ||||||||||||||||||||| ||
Sbjct: 366 gaaagtcttgatctgaaagcagctactgatataatttgttccaggacaccatcacagctg 425
Query: 387 caaataatgaaacagacttattatgctagattcggtacttatcttgagcatgacattgct 446
||||||||||||||||| |||||||| | || |||||||||||||||||||||||| |
Sbjct: 426 caaataatgaaacagacatattatgcaaagtttggtacttatcttgagcatgacattagt 485
Query: 447 caccacacatccggtgatcaccagaagcttttacttgcatatatggggattccacgctat 506
|| || |||||||| ||||| |||||| | ||||| || ||| | || |||||||||||
Sbjct: 486 cagcaaacatccggcgatcatcagaagatcttactagcctatgttggcattccacgctac 545
Query: 507 gaagg 511
|||||
Sbjct: 546 gaagg 550
>gb|CV761162.1|CV761162 FGAS055550 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 840
Score = 381 bits (192), Expect = e-103
Identities = 536/650 (82%), Gaps = 3/650 (0%)
Strand = Plus / Plus
Query: 344 agcagccactgagattatatgttccaggacaccatcacagttgcaaataatgaaacagac 403
|||||| ||||| || || ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 127 agcagctactgatataatttgttccaggacaccatcacagctgcaaataatgaaacagac 186
Query: 404 ttattatgctagattcggtacttatcttgagcatgacattgctcaccacacatccggtga 463
|||||||| | || |||||||||||||||||||||||| ||| || ||||||| ||
Sbjct: 187 atattatgcaaagtttggtacttatcttgagcatgacattagtcagcaagcatccggcga 246
Query: 464 tcaccagaagcttttacttgcatatatggggattccacgctatgaaggtcccgaggttga 523
||| |||||| | ||||| || ||| | || ||||||||||| ||||| || ||||||||
Sbjct: 247 tcatcagaagatcttactagcctatgttggcattccacgctacgaaggcccggaggttga 306
Query: 524 tcctacaattgtgacacatgatgcaaaggatttgtacaaagctggtgagaaaaggctggg 583
||| || || ||||||| |||||| ||||| | ||||||||||||||||||| ||||||
Sbjct: 307 tcccactatagtgacacttgatgcgaaggacctctacaaagctggtgagaaaaagctggg 366
Query: 584 tacggacgagaagatttttatccgtgttttcactgaacgcagttgggcacacttggcatc 643
|| | || || | || ||||| | |||||||| ||||| ||||||||| ||||| |
Sbjct: 367 cacaaatgacaaaaccttcatccgcatcttcactgagcgcagctgggcacacatggcagc 426
Query: 644 tgtttcttctgcttaccatcatatgtatgaccggaaattagagaaggttatcaagagcga 703
|||| |||||||||||| ||| |||||||| ||| ||| |||||||| | |||| ||
Sbjct: 427 tgttgcttctgcttaccgtcacatgtatgatcggtcgttacagaaggttgtgaagaatga 486
Query: 704 aacttctggaaactttgaatttgcacttttgactatcctcagatgcgcggaaaacccagc 763
||| ||||||||||||||| |||| || || |||||||||||||| || || || |||||
Sbjct: 487 aacatctggaaactttgaagttgctctgttaactatcctcagatgtgctgagaatccagc 546
Query: 764 aaagtattttgctaagctcttacgaaaggccatgaaaggtttaggcactgatgacatgac 823
||||||||||||||| | || | ||| ||||||||||| |||| |||||||||| |||
Sbjct: 547 gaagtattttgctaaggtgttgaggaagtccatgaaaggtctaggtactgatgacaagac 606
Query: 824 acttataagggtggtggtgacgaggaccgagattgacatgcaatatatcaaggcagagta 883
|||| ||||||| ||||| || ||||| |||||||| ||||| |||||||||||||| ||
Sbjct: 607 acttgtaagggttgtggtaacaaggactgagattgatatgcagtatatcaaggcagaata 666
Query: 884 cttgaagaagtataagaagccattagctgaggctatcaactccgagacatcaggaaacta 943
| ||||| || || ||||| || ||||| |||||| | ||||| |||||||| ||
Sbjct: 667 ttacaagaaatacaaaaagccgttggctgatgctatccattccgaaacatcaggcggtta 726
Query: 944 tcggacgttccttctttcacttgttggtcatggccattaggctatgtttc 993
|||||||||||| ||||| |||| ||| | ||||||||||||||||||
Sbjct: 727 tcggacgttcctgctttctcttggtgg---tagccattaggctatgtttc 773
>gb|BE516162.1|BE516162 WHE612_G07_N14ZA Wheat ABA-treated embryo cDNA library Triticum
aestivum cDNA clone WHE612_G07_N14, mRNA sequence
Length = 642
Score = 323 bits (163), Expect = 2e-086
Identities = 444/537 (82%), Gaps = 3/537 (0%)
Strand = Plus / Plus
Query: 457 ccggtgatcaccagaagcttttacttgcatatatggggattccacgctatgaaggtcccg 516
|||| ||||| |||||| | ||||| || ||| | || ||||||||||| ||||| || |
Sbjct: 16 ccggcgatcatcagaagatcttactagcctatgttggcattccacgctacgaaggcccgg 75
Query: 517 aggttgatcctacaattgtgacacatgatgcaaaggatttgtacaaagctggtgagaaaa 576
|||||||||| || || |||||||||||||| ||||| | |||||||||||||||||||
Sbjct: 76 aggttgatcccactatagtgacacatgatgcgaaggacctctacaaagctggtgagaaaa 135
Query: 577 ggctgggtacggacgagaagatttttatccgtgttttcactgaacgcagttgggcacact 636
|||||| || || ||||| | || ||||| | |||||||||||||| |||||||||
Sbjct: 136 agctgggcacagatgagaaaaccttcatccgcatcttcactgaacgcagctgggcacaca 195
Query: 637 tggcatctgtttcttctgcttaccatcatatgtatgaccggaaattagagaaggttatca 696
||||| ||||| |||||||||||||||| |||||||| ||| ||| |||||||| | |
Sbjct: 196 tggcagctgttgcttctgcttaccatcacatgtatgatcggtcgttacagaaggttgtga 255
Query: 697 agagcgaaacttctggaaactttgaatttgcacttttgactatcctcagatgcgcggaaa 756
||| ||||| ||||||||||||||| |||| || || |||||||||||||| || || |
Sbjct: 256 agaatgaaacatctggaaactttgaagttgctctgttaactatcctcagatgtgctgaga 315
Query: 757 acccagcaaagtattttgctaagctcttacgaaaggccatgaaaggtttaggcactgatg 816
| ||||| ||||||||||||||| | || | ||| ||||||||||| |||| |||||||
Sbjct: 316 atccagcgaagtattttgctaaggtgttgaggaagtccatgaaaggtctaggtactgatg 375
Query: 817 acatgacacttataagggtggtggtgacgaggaccgagattgacatgcaatatatcaagg 876
||| ||||||| ||||||| ||||| || ||||| |||||||| ||||| ||||||||||
Sbjct: 376 acaagacacttgtaagggttgtggtaacaaggactgagattgatatgcagtatatcaagg 435
Query: 877 cagagtacttgaagaagtataagaagccattagctgaggctatcaactccgagacatcag 936
|||| || | ||||| || || ||||| |||||||| |||||| | ||||| |||||||
Sbjct: 436 cagaatattacaagaaatacaaaaagcctttagctgatgctatccattccgaaacatcag 495
Query: 937 gaaactatcggacgttccttctttcacttgttggtcatggccattaggctatgtttc 993
| |||||||| ||||| ||||| |||||||| | ||||||||||||||||||
Sbjct: 496 gcggttatcggacattcctgctttctcttgttgg---tagccattaggctatgtttc 549
>gb|BF474383.1|BF474383 WHE0843_D07_H13ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0843_D07_H13, mRNA sequence
Length = 611
Score = 274 bits (138), Expect = 2e-071
Identities = 380/460 (82%), Gaps = 3/460 (0%)
Strand = Plus / Plus
Query: 534 gtgacacatgatgcaaaggatttgtacaaagctggtgagaaaaggctgggtacggacgag 593
|||||||||||||| ||||| | ||||||||||||||||||| |||||| || || |||
Sbjct: 1 gtgacacatgatgcgaaggacctctacaaagctggtgagaaaaagctgggcacagatgag 60
Query: 594 aagatttttatccgtgttttcactgaacgcagttgggcacacttggcatctgtttcttct 653
|| | || ||||| | |||||||| ||||| ||||||||| ||||| ||||| |||||
Sbjct: 61 aaaaccttcatccgcatcttcactgagcgcagctgggcacacatggcagctgttgcttct 120
Query: 654 gcttaccatcatatgtatgaccggaaattagagaaggttatcaagagcgaaacttctgga 713
||||||| ||| |||||||| ||| ||| |||||||| | |||| ||||| ||||||
Sbjct: 121 gcttaccgtcacatgtatgatcggtcgttacagaaggttgtgaagaatgaaacatctgga 180
Query: 714 aactttgaatttgcacttttgactatcctcagatgcgcggaaaacccagcaaagtatttt 773
||||||||| |||| || || |||||||||||||| || || || ||||| |||||||||
Sbjct: 181 aactttgaagttgctctgttaactatcctcagatgtgctgagaatccagcgaagtatttt 240
Query: 774 gctaagctcttacgaaaggccatgaaaggtttaggcactgatgacatgacacttataagg 833
|||||| | || | ||| ||||||||||| |||| |||||||||| ||||||| |||||
Sbjct: 241 gctaaggtgttgaggaagtccatgaaaggtctaggtactgatgacaagacacttgtaagg 300
Query: 834 gtggtggtgacgaggaccgagattgacatgcaatatatcaaggcagagtacttgaagaag 893
|| ||||| || ||||| |||||||| ||||| |||||||||||||| || | |||||
Sbjct: 301 gttgtggtaacaaggactgagattgatatgcagtatatcaaggcagaatattacaagaaa 360
Query: 894 tataagaagccattagctgaggctatcaactccgagacatcaggaaactatcggacgttc 953
|| || ||||| || ||||| |||||| | ||||| |||||||| ||||||||||||
Sbjct: 361 tacaaaaagccgttggctgatgctatccattccgaaacatcaggcggttatcggacgttc 420
Query: 954 cttctttcacttgttggtcatggccattaggctatgtttc 993
|| ||||| |||||||| | ||||||||||||||||||
Sbjct: 421 ctgctttctcttgttgg---tagccattaggctatgtttc 457
>gb|CA603443.1|CA603443 wr1.pk0024.c4 wr1 Triticum aestivum cDNA clone wr1.pk0024.c4 5'
end, mRNA sequence
Length = 448
Score = 220 bits (111), Expect = 2e-055
Identities = 291/351 (82%)
Strand = Plus / Plus
Query: 621 cgcagttgggcacacttggcatctgtttcttctgcttaccatcatatgtatgaccggaaa 680
||||| ||||||||| ||||| ||||| |||||||||||| ||| |||||||| |||
Sbjct: 1 cgcagctgggcacacatggcagctgttgcttctgcttaccgtcacatgtatgatcggtcg 60
Query: 681 ttagagaaggttatcaagagcgaaacttctggaaactttgaatttgcacttttgactatc 740
||| |||||||| | |||| ||||| ||||||||||||||| |||| || || ||||||
Sbjct: 61 ttacagaaggttgtgaagaatgaaacatctggaaactttgaagttgctctgttaactatc 120
Query: 741 ctcagatgcgcggaaaacccagcaaagtattttgctaagctcttacgaaaggccatgaaa 800
|||||||| || || || ||||| ||||||||||||||| | || | ||| ||||||||
Sbjct: 121 ctcagatgtgctgagaatccagcgaagtattttgctaaggtgttgaggaagtccatgaaa 180
Query: 801 ggtttaggcactgatgacatgacacttataagggtggtggtgacgaggaccgagattgac 860
||| |||| |||||||||| ||||||| ||||||| ||||| || ||||| ||||||||
Sbjct: 181 ggtctaggtactgatgacaagacacttgtaagggttgtggtaacaaggactgagattgat 240
Query: 861 atgcaatatatcaaggcagagtacttgaagaagtataagaagccattagctgaggctatc 920
||||| |||||||||||||| || | ||||| || || ||||| || ||||| ||||||
Sbjct: 241 atgcagtatatcaaggcagaatattacaagaaatacaaaaagccgttggctgatgctatc 300
Query: 921 aactccgagacatcaggaaactatcggacgttccttctttcacttgttggt 971
| ||||| |||||||| |||||||||||||| ||||| |||||||||
Sbjct: 301 cattccgaaacatcaggcggttatcggacgttcctgctttctcttgttggt 351
>gb|CA639168.1|CA639168 wre1n.pk0023.c12 wre1n Triticum aestivum cDNA clone
wre1n.pk0023.c12 5' end, mRNA sequence
Length = 576
Score = 194 bits (98), Expect = 1e-047
Identities = 283/342 (82%), Gaps = 2/342 (0%)
Strand = Plus / Plus
Query: 540 catgatgcaaaggatttgtacaaagctggtgagaaaaggctgggtacggacgagaagatt 599
|||||||| ||||| | ||||||||||||||||||| |||||| || || ||||| |
Sbjct: 1 catgatgcgaaggacctctacaaagctggtgagaaaaagctgggcacagatgagaaaacc 60
Query: 600 tttatccgtgttttcactgaacgcagttgggcacacttggcatctgtttcttctgcttac 659
|| ||||| | |||||||| ||||| ||||||||| ||||| ||||| |||||||||||
Sbjct: 61 ttcatccgcatcttcactgagcgcagctgggcacacatggcagctgttgcttctgcttac 120
Query: 660 catcatatgtatgaccggaaattagagaaggttatcaagagcgaaacttctggaaacttt 719
| ||| |||||||| ||| ||| |||||||| | |||| ||||| ||||||||||||
Sbjct: 121 cgtcacatgtatgatcggtcgttacagaaggttgtgaagaatgaaacatctggaaacttt 180
Query: 720 gaatttgcacttttgactatcctcagatgcgcggaaaacccagcaaagtattttgctaag 779
||| |||| || || |||||||||||||| || || || ||||| |||||||||||||||
Sbjct: 181 gaagttgctctgttaactatcctcagatgtgctgagaatccagcgaagtattttgctaag 240
Query: 780 ctcttacgaaaggccatgaaaggtttaggcactgatgacatgacacttataagggtggt- 838
| || | || ||||||||||| |||| |||||||||| ||||||| ||||||| ||
Sbjct: 241 gtgttgaggaa-tccatgaaaggtctaggtactgatgacaagacacttgtaagggttgtg 299
Query: 839 ggtgacgaggaccgagattgacatgcaatatatcaaggcaga 880
||| || ||||| |||||||| ||||| ||||||||||||||
Sbjct: 300 ggtaacaaggactgagattgatatgcagtatatcaaggcaga 341
>gb|CN008072.1|CN008072 WHE2637_A09_A17ZE Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2637_A09_A17,
mRNA sequence
Length = 537
Score = 186 bits (94), Expect = 3e-045
Identities = 243/292 (83%), Gaps = 3/292 (1%)
Strand = Plus / Plus
Query: 702 gaaacttctggaaactttgaatttgcacttttgactatcctcagatgcgcggaaaaccca 761
||||| ||||||||||||||| |||| || || |||||||||||||| || || || |||
Sbjct: 12 gaaacatctggaaactttgaagttgctctgttaactatcctcagatgtgctgagaatcca 71
Query: 762 gcaaagtattttgctaagctcttacgaaaggccatgaaaggtttaggcactgatgacatg 821
|| ||||||||||||||| | || | ||| ||||||||||| |||| |||||||||| |
Sbjct: 72 gcgaagtattttgctaaggtgttgaggaagtccatgaaaggtctaggtactgatgacaag 131
Query: 822 acacttataagggtggtggtgacgaggaccgagattgacatgcaatatatcaaggcagag 881
|||||| ||||||| ||||| || ||||| |||||||| ||||| ||||||||||||||
Sbjct: 132 acacttgtaagggttgtggtaacaaggactgagattgatatgcagtatatcaaggcagaa 191
Query: 882 tacttgaagaagtataagaagccattagctgaggctatcaactccgagacatcaggaaac 941
|| | ||||| || || ||||| || ||||| |||||| | ||||| ||||||||
Sbjct: 192 tattacaagaaatacaaaaagccgttggctgatgctatccattccgaaacatcaggcggt 251
Query: 942 tatcggacgttccttctttcacttgttggtcatggccattaggctatgtttc 993
|||||||||||||| ||||| |||||||| | ||||||||||||||||||
Sbjct: 252 tatcggacgttcctgctttctcttgttgg---tagccattaggctatgtttc 300
>gb|CA618329.1|CA618329 wl1n.pk0032.b8 wl1n Triticum aestivum cDNA clone wl1n.pk0032.b8 5'
end, mRNA sequence
Length = 554
Score = 153 bits (77), Expect = 4e-035
Identities = 98/105 (93%)
Strand = Plus / Plus
Query: 27 cggcgatggcgagcctcaccctgccgccggcgccccccaacccacgccaggacgccatcg 86
|||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||
Sbjct: 104 cggcaatggcgagcctcaccttgccgccggcgccccctaacccccgccaggacgccatcg 163
Query: 87 acctccacaaggccttcaaagggtttggatgtgacagtacaacag 131
|||||||||||||||||||||||||||| ||||| | ||||||||
Sbjct: 164 acctccacaaggccttcaaagggtttggctgtgatactacaacag 208
Score = 83.8 bits (42), Expect = 3e-014
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 796 tgaaaggtttaggcactgatgacatgacacttataagggtggtggtgacgaggaccgaga 855
|||||||| || | |||||||||| ||||||| |||||||| ||||||| ||||| ||||
Sbjct: 309 tgaaaggtctangtactgatgacaagacacttgtaagggtg-tggtgacaaggactgaga 367
Query: 856 ttgacatgcaatatatcaaggcaga 880
|||| ||||| ||||||||||||||
Sbjct: 368 ttgatatgcagtatatcaaggcaga 392
>gb|CA649516.1|CA649516 wre1n.pk0140.f1 wre1n Triticum aestivum cDNA clone wre1n.pk0140.f1
5' end, mRNA sequence
Length = 642
Score = 151 bits (76), Expect = 2e-034
Identities = 97/104 (93%)
Strand = Plus / Plus
Query: 27 cggcgatggcgagcctcaccctgccgccggcgccccccaacccacgccaggacgccatcg 86
|||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||
Sbjct: 110 cggcaatggcgagcctcaccttgccgccggcgcccccgaacccgcgccaggacgccatcg 169
Query: 87 acctccacaaggccttcaaagggtttggatgtgacagtacaaca 130
||||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 170 acctccacaaggccttcaaagggttgggctgtgatagtacaaca 213
>gb|CD935094.1|CD935094 OV.002P18F010109 OV Triticum aestivum cDNA clone OV002P18, mRNA
sequence
Length = 696
Score = 99.6 bits (50), Expect = 5e-019
Identities = 110/130 (84%)
Strand = Plus / Minus
Query: 454 catccggtgatcaccagaagcttttacttgcatatatggggattccacgctatgaaggtc 513
||||||| ||||| |||||| | ||||| || ||| | || ||||||||||| ||||| |
Sbjct: 197 catccggcgatcatcagaagatcttactagcctatgttggcattccacgctacgaaggcc 138
Query: 514 ccgaggttgatcctacaattgtgacacatgatgcaaaggatttgtacaaagctggtgaga 573
| ||||||||||| || || |||||||||||||| ||||| | ||||||||||||||||
Sbjct: 137 cggaggttgatcccactatagtgacacatgatgcgaaggacctctacaaagctggtgaga 78
Query: 574 aaaggctggg 583
||| ||||||
Sbjct: 77 aaaagctggg 68
>gb|CD452497.1|CD452497 WHE1107_B01_D01ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1107_B01_D01,
mRNA sequence
Length = 501
Score = 95.6 bits (48), Expect = 8e-018
Identities = 146/178 (82%), Gaps = 3/178 (1%)
Strand = Plus / Minus
Query: 816 gacatgacacttataagggtggtggtgacgaggaccgagattgacatgcaatatatcaag 875
|||| ||||||| ||||||| ||||| || ||||| |||||||| ||||| |||||||||
Sbjct: 499 gacaagacacttgtaagggttgtggtaacaaggactgagattgatatgcagtatatcaag 440
Query: 876 gcagagtacttgaagaagtataagaagccattagctgaggctatcaactccgagacatca 935
||||| || | ||||| || || ||||| |||||||| |||||| | ||||| ||||||
Sbjct: 439 gcagaatattacaagaaatacaaaaagcctttagctgatgctatccattccgaaacatca 380
Query: 936 ggaaactatcggacgttccttctttcacttgttggtcatggccattaggctatgtttc 993
|| |||||||| ||||| ||||| || ||||| | ||||||||||||||||||
Sbjct: 379 ggcggttatcggacattcctgctttctctggttgg---tagccattaggctatgtttc 325
>gb|CN012314.1|CN012314 WHE3895_C08_E15ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3895_C08_E15,
mRNA sequence
Length = 526
Score = 93.7 bits (47), Expect = 3e-017
Identities = 143/173 (82%), Gaps = 4/173 (2%)
Strand = Plus / Plus
Query: 821 gacacttataagggtggtggtgacgaggaccgagattgacatgcaatatatcaaggcaga 880
||||||| ||||||| ||||| || ||||| |||||||| ||||| ||||||||||||||
Sbjct: 16 gacacttgtaagggttgtggtaac-aggactgagattgatatgcagtatatcaaggcaga 74
Query: 881 gtacttgaagaagtataagaagccattagctgaggctatcaactccgagacatcaggaaa 940
|| | ||||| || || ||||| || ||||| |||||| | ||||| ||||||||
Sbjct: 75 atattacaagaaatacaaaaagccgttggctgatgctatccattccgaaacatcaggcgg 134
Query: 941 ctatcggacgttccttctttcacttgttggtcatggccattaggctatgtttc 993
|||||||||||||| ||||| |||||||| | ||||||||||||||||||
Sbjct: 135 ttatcggacgttcctgctttctcttgttgg---tagccattaggctatgtttc 184
>gb|BE442892.1|BE442892 WHE1107_B01_D01ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1107_B01_D01,
mRNA sequence
Length = 490
Score = 85.7 bits (43), Expect = 8e-015
Identities = 135/165 (81%), Gaps = 3/165 (1%)
Strand = Plus / Plus
Query: 829 taagggtggtggtgacgaggaccgagattgacatgcaatatatcaaggcagagtacttga 888
||||||| ||||| || ||||| |||||||| ||||| |||||||||||||| || | |
Sbjct: 5 taagggttgtggtaacaaggactgagattgatatgcagtatatcaaggcagaatattaca 64
Query: 889 agaagtataagaagccattagctgaggctatcaactccgagacatcaggaaactatcgga 948
|||| || || ||||| |||||||| |||||| | ||||| |||||||| |||||||
Sbjct: 65 agaaatacaaaaagcctttagctgatgctatccattccgaaacatcaggcggttatcgga 124
Query: 949 cgttccttctttcacttgttggtcatggccattaggctatgtttc 993
| ||||| ||||| || ||||| | ||||||||||||||||||
Sbjct: 125 cattcctgctttctctggttgg---tagccattaggctatgtttc 166
>gb|BE444251.1|BE444251 WHE1117_A02_A03ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1117_A02_A03,
mRNA sequence
Length = 480
Score = 77.8 bits (39), Expect = 2e-012
Identities = 128/157 (81%), Gaps = 3/157 (1%)
Strand = Plus / Plus
Query: 837 gtggtgacgaggaccgagattgacatgcaatatatcaaggcagagtacttgaagaagtat 896
||||| || ||||| |||||||| ||||| |||||||||||||| || | ||||| ||
Sbjct: 3 gtggtaacaaggactgagattgatatgcagtatatcaaggcagaatattacaagaaatac 62
Query: 897 aagaagccattagctgaggctatcaactccgagacatcaggaaactatcggacgttcctt 956
|| ||||| |||||||| |||||| | ||||| |||||||| |||||||| |||||
Sbjct: 63 aaaaagcctttagctgatgctatccattccgaaacatcaggcggttatcggacattcctg 122
Query: 957 ctttcacttgttggtcatggccattaggctatgtttc 993
||||| || ||||| | ||||||||||||||||||
Sbjct: 123 ctttctctggttgg---tagccattaggctatgtttc 156
>gb|CA649917.1|CA649917 wre1n.pk0145.c1 wre1n Triticum aestivum cDNA clone wre1n.pk0145.c1
5' end, mRNA sequence
Length = 504
Score = 65.9 bits (33), Expect = 7e-009
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 832 gggtggtggtgacgaggaccgagattgacatgcaatatatcaaggcagagtac 884
|||||| |||||||||||||||| |||||||| | || |||||||||||||||
Sbjct: 317 gggtggcggtgacgaggaccgaggttgacatgaagtacatcaaggcagagtac 265
>gb|AY462115.1| Triticum aestivum annexin mRNA, complete cds
Length = 951
Score = 65.9 bits (33), Expect = 7e-009
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 832 gggtggtggtgacgaggaccgagattgacatgcaatatatcaaggcagagtac 884
|||||| |||||||||||||||| |||||||| | || |||||||||||||||
Sbjct: 800 gggtggcggtgacgaggaccgaggttgacatgaagtacatcaaggcagagtac 852
Score = 48.1 bits (24), Expect = 0.002
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 89 ctccacaaggccttcaaagggtttggatgtgacagtacaacagggataaacatacttact 148
|||||||||||||||||||| || || || ||||| || || | || ||||||||| ||
Sbjct: 58 ctccacaaggccttcaaaggtttcggctgcgacagcacgacggtgaccaacatacttgct 117
Query: 149 catcgcgattcggggcagcg 168
|| ||||| |||| ||||||
Sbjct: 118 caccgcgactcggcgcagcg 137
Score = 46.1 bits (23), Expect = 0.007
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 240 agtggaaaccacaagaaagctatgtcgctgtggattcttgatcctgctggacgtgatgc 298
||||||||||||||||| |||||| ||| ||| | || || |||||||| ||||||||
Sbjct: 208 agtggaaaccacaagaatgctatgctgctttgggtcctcgaccctgctgggcgtgatgc 266
>gb|BJ228193.1|BJ228193 BJ228193 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl5d01 3', mRNA sequence
Length = 592
Score = 60.0 bits (30), Expect = 5e-007
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 832 gggtggtggtgacgaggaccgagattgacatgcaatatatcaaggcagagtac 884
|||||| |||| ||||||||||| |||||||| | || |||||||||||||||
Sbjct: 336 gggtggcggtgncgaggaccgaggttgacatgaagtacatcaaggcagagtac 284
>gb|CA606157.1|CA606157 wr1.pk0063.c8 wr1 Triticum aestivum cDNA clone wr1.pk0063.c8 5'
end, mRNA sequence
Length = 652
Score = 58.0 bits (29), Expect = 2e-006
Identities = 78/94 (82%), Gaps = 3/94 (3%)
Strand = Plus / Minus
Query: 900 aagccattagctgaggctatcaactccgagacatcaggaaactatcggacgttccttctt 959
||||| || ||||| |||||| | ||||| |||||||| |||||||||||||| |||
Sbjct: 444 aagccgttggctgatgctatccattccgaaacatcaggcgnttatcggacgttcctgctt 385
Query: 960 tcacttgttggtcatggccattaggctatgtttc 993
|| |||||||| | ||||||||||||||||||
Sbjct: 384 tctcttgttgg---tagccattaggctatgtttc 354
>gb|DR735537.1|DR735537 FGAS081207 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 1121
Score = 58.0 bits (29), Expect = 2e-006
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 71 cgccaggacgccatcgacctccacaaggccttcaaagggtt 111
||||| |||||||||| |||||||| |||||||||||||||
Sbjct: 122 cgccacgacgccatcgccctccacagggccttcaaagggtt 162
>gb|BE406539.1|BE406539 WHE0418_a08_a16zB Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0418_a08_a16, mRNA
sequence
Length = 309
Score = 56.0 bits (28), Expect = 7e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 89 ctccacaaggccttcaaagggtttggatgtgacagtacaacagggataaacatacttact 148
||||||||||||||||||||||| || || ||||| || || | || ||||||||| ||
Sbjct: 90 ctccacaaggccttcaaagggttcggctgcgacagcacgacggtgactaacatacttgct 149
Query: 149 catcgcgattcggggcagcg 168
|| ||||| |||| ||||||
Sbjct: 150 caccgcgactcggcgcagcg 169
Score = 48.1 bits (24), Expect = 0.002
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 232 ctgaactcagtggaaaccacaagaaagctatg 263
||||||| ||||||||||||||||| ||||||
Sbjct: 232 ctgaactgagtggaaaccacaagaatgctatg 263
>gb|CV766772.1|CV766772 FGAS061159 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 841
Score = 56.0 bits (28), Expect = 7e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 89 ctccacaaggccttcaaagggtttggatgtgacagtacaacagggataaacatacttact 148
||||||||||||||||||||||| || || ||||| || || | || ||||||||| ||
Sbjct: 206 ctccacaaggccttcaaagggttcggctgcgacagcacgacggtgactaacatacttgct 265
Query: 149 catcgcgattcggggcagcg 168
|| ||||| |||| ||||||
Sbjct: 266 caccgcgactcggcgcagcg 285
Score = 48.1 bits (24), Expect = 0.002
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 232 ctgaactcagtggaaaccacaagaaagctatg 263
||||||| ||||||||||||||||| ||||||
Sbjct: 348 ctgaactgagtggaaaccacaagaatgctatg 379
>gb|CV776224.1|CV776224 FGAS070628 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 820
Score = 56.0 bits (28), Expect = 7e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 89 ctccacaaggccttcaaagggtttggatgtgacagtacaacagggataaacatacttact 148
||||||||||||||||||||||| || || ||||| || || | || ||||||||| ||
Sbjct: 189 ctccacaaggccttcaaagggttcggctgcgacagcacgacggtgactaacatacttgct 248
Query: 149 catcgcgattcggggcagcg 168
|| ||||| |||| ||||||
Sbjct: 249 caccgcgactcggcgcagcg 268
Score = 48.1 bits (24), Expect = 0.002
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 232 ctgaactcagtggaaaccacaagaaagctatg 263
||||||| ||||||||||||||||| ||||||
Sbjct: 331 ctgaactgagtggaaaccacaagaatgctatg 362
>gb|BJ287010.1|BJ287010 BJ287010 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr24d12 3', mRNA sequence
Length = 673
Score = 52.0 bits (26), Expect = 1e-004
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 839 ggtgacgaggaccgagattgacatgcaatatatcaaggcagagtac 884
|||||||||||||||| | |||||| | || |||||||||||||||
Sbjct: 337 ggtgacgaggaccgaggtcgacatgaagtacatcaaggcagagtac 292
>gb|CA658387.1|CA658387 wlm0.pk041.o12 wlm0 Triticum aestivum cDNA clone wlm0.pk041.o12 5'
end, mRNA sequence
Length = 465
Score = 52.0 bits (26), Expect = 1e-004
Identities = 46/52 (88%), Gaps = 3/52 (5%)
Strand = Plus / Minus
Query: 942 tatcggacgttccttctttcacttgttggtcatggccattaggctatgtttc 993
|||||||||||||| ||||| |||||||| | ||||||||||||||||||
Sbjct: 352 tatcggacgttcctgctttctcttgttgg---tagccattaggctatgtttc 304
>gb|BE415152.1|BE415152 MWL023.B06F991217 ITEC MWL Wheat Root Library Triticum aestivum
cDNA clone MWL023.B06, mRNA sequence
Length = 305
Score = 48.1 bits (24), Expect = 0.002
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 76 ggacgccatcgacctccacaaggccttcaaagggtt 111
||||||| ||| |||||||||||||||||||||||
Sbjct: 85 ggacgccgtcgctctccacaaggccttcaaagggtt 120
>gb|CV522175.1|CV522175 RH-085 Triticum aestivum subtracted, clontech Triticum aestivum
cDNA, mRNA sequence
Length = 401
Score = 48.1 bits (24), Expect = 0.002
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 828 ataagggtggtggtgacgaggaccgagattgacatg 863
|||||||||| |||||||||||||||| | ||||||
Sbjct: 353 ataagggtggcggtgacgaggaccgaggtcgacatg 388
>gb|CV763663.1|CV763663 FGAS058046 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 834
Score = 48.1 bits (24), Expect = 0.002
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 89 ctccacaaggccttcaaagggtttggatgtgacagtacaacagggataaacatacttact 148
|||||||||||||||||||| || || || ||||| || || | || ||||||||| ||
Sbjct: 179 ctccacaaggccttcaaaggtttcggctgcgacagcacgacggtgaccaacatacttgct 238
Query: 149 catcgcgattcggggcagcg 168
|| ||||| |||| ||||||
Sbjct: 239 caccgcgactcggcgcagcg 258
Score = 40.1 bits (20), Expect = 0.43
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 240 agtggaaaccacaagaaagctatg 263
||||||||||||||||| ||||||
Sbjct: 329 agtggaaaccacaagaatgctatg 352
>gb|CV767735.1|CV767735 FGAS062126 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 885
Score = 48.1 bits (24), Expect = 0.002
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 89 ctccacaaggccttcaaagggtttggatgtgacagtacaacagggataaacatacttact 148
|||||||||||||||||||| || || || ||||| || || | || ||||||||| ||
Sbjct: 192 ctccacaaggccttcaaaggtttcggctgcgacagcacgacggtgaccaacatacttgct 251
Query: 149 catcgcgattcggggcagcg 168
|| ||||| |||| ||||||
Sbjct: 252 caccgcgactcggcgcagcg 271
Score = 46.1 bits (23), Expect = 0.007
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 240 agtggaaaccacaagaaagctatgtcgctgtggattcttgatcctgctggacgtgatgc 298
||||||||||||||||| |||||| ||| ||| | || || |||||||| ||||||||
Sbjct: 342 agtggaaaccacaagaatgctatgctgctttgggtcctcgaccctgctgggcgtgatgc 400
>gb|BE518038.1|BE518038 WHE0806_E09_I18ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0806_E09_I18, mRNA sequence
Length = 547
Score = 46.1 bits (23), Expect = 0.007
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 240 agtggaaaccacaagaaagctatgtcgctgtggattcttgatcctgctggacgtgatgc 298
||||||||||||||||| |||||| ||| ||| | || || |||||||| ||||||||
Sbjct: 229 agtggaaaccacaagaatgctatgctgctttgggtcctcgaccctgctgggcgtgatgc 287
>gb|CD939676.1|CD939676 OV.114H20F010312 OV Triticum aestivum cDNA clone OV114H20, mRNA
sequence
Length = 385
Score = 44.1 bits (22), Expect = 0.027
Identities = 45/52 (86%), Gaps = 3/52 (5%)
Strand = Plus / Plus
Query: 942 tatcggacgttccttctttcacttgttggtcatggccattaggctatgtttc 993
|||||||| ||||| ||||| ||||||||| ||||||||||||||||||
Sbjct: 31 tatcggacattcctgctttctcttgttggta---gccattaggctatgtttc 79
>gb|BE426095.1|BE426095 WHE0328_G07_N14ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0328_G07_N14, mRNA
sequence
Length = 460
Score = 42.1 bits (21), Expect = 0.11
Identities = 46/53 (86%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 71 cgccaggacgccatcgacctccacaaggccttcaaagggtttggatgtgacag 123
||||| |||||||||| ||||| || |||||||||||| ||||| || |||||
Sbjct: 25 cgccatgacgccatcgccctcc-cagggccttcaaaggttttgggtgcgacag 76
>gb|BE444649.1|BE444649 WHE1137_A05_A09ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1137_A05_A09,
mRNA sequence
Length = 602
Score = 40.1 bits (20), Expect = 0.43
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 89 ctccacaaggccttcaaagg 108
||||||||||||||||||||
Sbjct: 301 ctccacaaggccttcaaagg 282
>gb|BF429216.1|BF429216 WHE1709_H02_O03ZS Wheat heat stressed spike cDNA library Triticum
aestivum cDNA clone WHE1709_H02_O03, mRNA sequence
Length = 607
Score = 40.1 bits (20), Expect = 0.43
Identities = 30/32 (93%), Gaps = 1/32 (3%)
Strand = Plus / Plus
Query: 77 gacgccatcgacctccacaaggccttcaaagg 108
|||||||||| |||||||| ||||||||||||
Sbjct: 3 gacgccatcgccctccaca-ggccttcaaagg 33
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 279,827
Number of Sequences: 636343
Number of extensions: 279827
Number of successful extensions: 75810
Number of sequences better than 0.5: 34
Number of HSP's better than 0.5 without gapping: 31
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 75723
Number of HSP's gapped (non-prelim): 69
length of query: 1473
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1453
effective length of database: 354,513,379
effective search space: 515107939687
effective search space used: 515107939687
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)