BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3665460.2.1
(649 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE404118.1|BE404118 WHE1201_D09_G17ZS Wheat etiolated se... 387 e-106
gb|CD373655.1|CD373655 WHE1201_D09_G17ZT CS wheat etiolated... 387 e-106
gb|CD866396.1|CD866396 AZO2.103F01R010329 AZO2 Triticum aes... 387 e-106
gb|CA618918.1|CA618918 wl1n.pk0045.f6 wl1n Triticum aestivu... 270 1e-070
gb|CK195720.1|CK195720 FGAS004163 Triticum aestivum FGAS: L... 206 1e-051
gb|BQ839155.1|BQ839155 WHE4163_A03_A05ZS Wheat CS whole pla... 168 3e-040
gb|BQ839459.1|BQ839459 WHE4166_D03_H06ZS Wheat CS whole pla... 125 4e-027
gb|CD892775.1|CD892775 G118.121O12R010927 G118 Triticum aes... 125 4e-027
gb|BE430565.1|BE430565 SUN004.C06R991213 ITEC SUN Wheat cDN... 119 2e-025
gb|BQ743475.1|BQ743475 WHE4104_D09_H18ZS Wheat salt-stresse... 119 2e-025
gb|CK193805.1|CK193805 FGAS002222 Triticum aestivum FGAS: L... 113 2e-023
gb|CA663590.1|CA663590 wlmk1.pk0035.f2 wlmk1 Triticum aesti... 111 6e-023
gb|CK208184.1|CK208184 FGAS019866 Triticum aestivum FGAS: L... 111 6e-023
gb|CK212514.1|CK212514 FGAS024389 Triticum aestivum FGAS: L... 109 2e-022
gb|BM140348.1|BM140348 WHE0474_b06_d12zS Wheat Fusarium gra... 103 1e-020
gb|BE428750.1|BE428750 MTD010.D12F990617 ITEC MTD Durum Whe... 90 2e-016
gb|BE429018.1|BE429018 MTD013.D05F990621 ITEC MTD Durum Whe... 90 2e-016
gb|CA712741.1|CA712741 wdk3c.pk006.d13 wdk3c Triticum aesti... 78 8e-013
gb|CD927363.1|CD927363 GR45.101O13F010315 GR45 Triticum aes... 70 2e-010
gb|BJ277768.1|BJ277768 BJ277768 Y. Ogihara unpublished cDNA... 68 8e-010
gb|AL826574.1|AL826574 AL826574 p:537 Triticum aestivum cDN... 68 8e-010
gb|CV778727.1|CV778727 FGAS073136 Triticum aestivum FGAS: L... 64 1e-008
gb|BE606424.1|BE606424 WHE0904_G11_N22ZS Wheat 5-15 DAP spi... 60 2e-007
gb|BJ281306.1|BJ281306 BJ281306 Y. Ogihara unpublished cDNA... 60 2e-007
gb|CN012120.1|CN012120 WHE3892_G05_M10ZS Wheat Fusarium gra... 60 2e-007
gb|DR736794.1|DR736794 FGAS082164 Triticum aestivum FGAS: L... 60 2e-007
gb|BJ277982.1|BJ277982 BJ277982 Y. Ogihara unpublished cDNA... 56 3e-006
gb|BM068644.1|BM068644 WHE3461_A09_B17ZS Wheat pre-anthesis... 46 0.003
gb|AL814447.1|AL814447 AL814447 h:116 Triticum aestivum cDN... 46 0.003
gb|DR739330.1|DR739330 FGAS084547 Triticum aestivum FGAS: L... 46 0.003
gb|BU672400.1|BU672400 WHE3304_E01_J02ZS Chinese Spring whe... 44 0.012
gb|CK215270.1|CK215270 FGAS027225 Triticum aestivum FGAS: L... 42 0.047
gb|BJ281411.1|BJ281411 BJ281411 Y. Ogihara unpublished cDNA... 40 0.18
gb|BJ286479.1|BJ286479 BJ286479 Y. Ogihara unpublished cDNA... 40 0.18
gb|CD868336.1|CD868336 AZO2.108J07F001113 AZO2 Triticum aes... 40 0.18
gb|CK204808.1|CK204808 FGAS013344 Triticum aestivum FGAS: L... 40 0.18
gb|CK205166.1|CK205166 FGAS013703 Triticum aestivum FGAS: L... 40 0.18
>gb|BE404118.1|BE404118 WHE1201_D09_G17ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1201_D09_G17, mRNA
sequence
Length = 625
Score = 387 bits (195), Expect = e-106
Identities = 323/366 (88%)
Strand = Plus / Plus
Query: 2 ctcaacgatctgatcctgctcaacagcggcatctcctcctgcatcccgcccgagatcggc 61
|||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 146 ctcaacgagctgatcctcctcaacagcggcatctcctcctgcatcccgccggagatcggc 205
Query: 62 aagctggccaagctcnccgtgctggacctcagcttcaccagcatcgccggcaccctgccg 121
||||||| ||||||| | ||||| |||||||||| || | |||||| ||||| ||||||
Sbjct: 206 aagctggacaagctcacggtgctcgacctcagctccaacggcatcgtcggcaagctgccg 265
Query: 122 gacacgatcggcaacatgcgggcgctggagcagctcgacgtcgcgcacaaccgcctcgcc 181
||||| |||||||||||||| || || ||||||||| |||||||| ||||| ||||||
Sbjct: 266 gacaccatcggcaacatgcgcgccctcgagcagctcaacgtcgcgaacaacatgctcgcc 325
Query: 182 ggcgagataccggagagcgtctgcggcctgccgcacctcaagaacttcacctactcgtac 241
|||||||| || |||||| |||||| ||||| |||||||||||||||||||||| ||
Sbjct: 326 ggcgagatccccgagagcatctgcgcgctgccaaacctcaagaacttcacctactcccac 385
Query: 242 aacttcttctgcggcgagccgcaccggtgcctcgaggtgccgcgcgtcgacgaccgccag 301
||||||||||||||||||||||||||||||||||||||||| | | |||||||||| |||
Sbjct: 386 aacttcttctgcggcgagccgcaccggtgcctcgaggtgccccacatcgacgaccggcag 445
Query: 302 aactgcatcgccgggcgccccgaccagcgcccgggcgaggagtgcatctcgttcctgcac 361
|||||||||||||| |||||||||||||| || |||||| |||||||| |||||| |||
Sbjct: 446 aactgcatcgccggacgccccgaccagcggcctggcgagcagtgcatcgagttcctccac 505
Query: 362 cagccg 367
| ||||
Sbjct: 506 cggccg 511
>gb|CD373655.1|CD373655 WHE1201_D09_G17ZT CS wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1201_D09_G17, mRNA
sequence
Length = 711
Score = 387 bits (195), Expect = e-106
Identities = 323/366 (88%)
Strand = Plus / Minus
Query: 2 ctcaacgatctgatcctgctcaacagcggcatctcctcctgcatcccgcccgagatcggc 61
|||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 605 ctcaacgagctgatcctcctcaacagcggcatctcctcctgcatcccgccggagatcggc 546
Query: 62 aagctggccaagctcnccgtgctggacctcagcttcaccagcatcgccggcaccctgccg 121
||||||| ||||||| | ||||| |||||||||| || | |||||| ||||| ||||||
Sbjct: 545 aagctggacaagctcacggtgctcgacctcagctccaacggcatcgtcggcaagctgccg 486
Query: 122 gacacgatcggcaacatgcgggcgctggagcagctcgacgtcgcgcacaaccgcctcgcc 181
||||| |||||||||||||| || || ||||||||| |||||||| ||||| ||||||
Sbjct: 485 gacaccatcggcaacatgcgcgccctcgagcagctcaacgtcgcgaacaacatgctcgcc 426
Query: 182 ggcgagataccggagagcgtctgcggcctgccgcacctcaagaacttcacctactcgtac 241
|||||||| || |||||| |||||| ||||| |||||||||||||||||||||| ||
Sbjct: 425 ggcgagatccccgagagcatctgcgcgctgccaaacctcaagaacttcacctactcccac 366
Query: 242 aacttcttctgcggcgagccgcaccggtgcctcgaggtgccgcgcgtcgacgaccgccag 301
||||||||||||||||||||||||||||||||||||||||| | | |||||||||| |||
Sbjct: 365 aacttcttctgcggcgagccgcaccggtgcctcgaggtgccccacatcgacgaccggcag 306
Query: 302 aactgcatcgccgggcgccccgaccagcgcccgggcgaggagtgcatctcgttcctgcac 361
|||||||||||||| |||||||||||||| || |||||| |||||||| |||||| |||
Sbjct: 305 aactgcatcgccggacgccccgaccagcggcctggcgagcagtgcatcgagttcctccac 246
Query: 362 cagccg 367
| ||||
Sbjct: 245 cggccg 240
>gb|CD866396.1|CD866396 AZO2.103F01R010329 AZO2 Triticum aestivum cDNA clone AZO2103F01,
mRNA sequence
Length = 749
Score = 387 bits (195), Expect = e-106
Identities = 323/366 (88%)
Strand = Plus / Minus
Query: 2 ctcaacgatctgatcctgctcaacagcggcatctcctcctgcatcccgcccgagatcggc 61
|||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 575 ctcaacgagctgatcctcctcaacagcggcatctcctcctgcatcccgccggagatcggc 516
Query: 62 aagctggccaagctcnccgtgctggacctcagcttcaccagcatcgccggcaccctgccg 121
||||||| ||||||| | ||||| |||||||||| || | |||||| ||||| ||||||
Sbjct: 515 aagctggacaagctcacggtgctcgacctcagctccaacggcatcgtcggcaagctgccg 456
Query: 122 gacacgatcggcaacatgcgggcgctggagcagctcgacgtcgcgcacaaccgcctcgcc 181
||||| |||||||||||||| || || ||||||||| |||||||| ||||| ||||||
Sbjct: 455 gacaccatcggcaacatgcgcgccctcgagcagctcaacgtcgcgaacaacatgctcgcc 396
Query: 182 ggcgagataccggagagcgtctgcggcctgccgcacctcaagaacttcacctactcgtac 241
|||||||| || |||||| |||||| ||||| |||||||||||||||||||||| ||
Sbjct: 395 ggcgagatccccgagagcatctgcgcgctgccaaacctcaagaacttcacctactcccac 336
Query: 242 aacttcttctgcggcgagccgcaccggtgcctcgaggtgccgcgcgtcgacgaccgccag 301
||||||||||||||||||||||||||||||||||||||||| | | |||||||||| |||
Sbjct: 335 aacttcttctgcggcgagccgcaccggtgcctcgaggtgccccacatcgacgaccggcag 276
Query: 302 aactgcatcgccgggcgccccgaccagcgcccgggcgaggagtgcatctcgttcctgcac 361
|||||||||||||| |||||||||||||| || |||||| |||||||| |||||| |||
Sbjct: 275 aactgcatcgccggacgccccgaccagcggcctggcgagcagtgcatcgagttcctccac 216
Query: 362 cagccg 367
| ||||
Sbjct: 215 cggccg 210
>gb|CA618918.1|CA618918 wl1n.pk0045.f6 wl1n Triticum aestivum cDNA clone wl1n.pk0045.f6 5'
end, mRNA sequence
Length = 434
Score = 270 bits (136), Expect = 1e-070
Identities = 232/258 (89%), Gaps = 5/258 (1%)
Strand = Plus / Plus
Query: 1 gctcaacgatctgatcctgctcaacagcggcatctcctcctgcatcccgcccgagatcgg 60
||||||||| || ||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 165 gctcaacgagctcatcctcctcaacagcggcatctcctcctgcatcccgccggagatcgg 224
Query: 61 caagctggccaagctcnccgtgctggacctcagcttcaccagcatcgccggcaccctgcc 120
|||||||| ||||||| ||||||| ||||||||||||| ||||||||||||| | |||||
Sbjct: 225 caagctggacaagctcaccgtgctcgacctcagcttcaacagcatcgccggcgcgctgcc 284
Query: 121 -ggacacgatcggcaacatgcgggcgct-ggagcagctcgacgtcgcgcacaaccgcctc 178
||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| |||
Sbjct: 285 gggacacgatcggcggcatgcgggcgctgggagcagctggacgtcgcgcacaaccggctc 344
Query: 179 gccggcgaga-taccggagagcgtctgcggcctgccgcacctcaagaacttcacctactc 237
|||||||| | ||| ||||| ||||| |||||||||||||||||| ||||||||||
Sbjct: 345 aacggcgagattcccgaagagcatctgc-nactgccgcacctcaagaac-tcacctactc 402
Query: 238 gtacaacttcttctgcgg 255
||||||||||||||||||
Sbjct: 403 gtacaacttcttctgcgg 420
>gb|CK195720.1|CK195720 FGAS004163 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 840
Score = 206 bits (104), Expect = 1e-051
Identities = 208/240 (86%), Gaps = 2/240 (0%)
Strand = Plus / Minus
Query: 128 atcggcaacatgcgggcgctggagcagctcgacgtcgcgcacaaccgcctcgccggcgag 187
||||||||||| || || || ||||||||| |||||||| ||||| ||||||||||||
Sbjct: 581 atcggcaacat-cgcgccctcgagcagctcaacgtcgcgaacaacatgctcgccggcgag 523
Query: 188 ataccggagagcgtctgcggcctgccgcacctcaagaacttcacctactcgtacaacttc 247
|| || |||||| |||||| ||||| ||||||||||| |||||||||| ||||||||
Sbjct: 522 atccccgagagcatctgcgcgctgccaaacctcaagaacctcacctactcccacaacttc 463
Query: 248 ttctgcggcgagccgcaccggtgcctcgaggtgccgcgcgtcgacgaccgccagaactgc 307
||||||||||||||||||||||||||||| ||||| | | |||||||||| |||||||||
Sbjct: 462 ttctgcggcgagccgcaccggtgcctcga-gtgccccacatcgacgaccggcagaactgc 404
Query: 308 atcgccgggcgccccgaccagcgcccgggcgaggagtgcatctcgttcctgcaccagccg 367
|||||||| |||||||||||||| || |||||| |||||||| |||||| |||| ||||
Sbjct: 403 atcgccggacgccccgaccagcggcctggcgagcagtgcatcgagttcctccaccggccg 344
>gb|BQ839155.1|BQ839155 WHE4163_A03_A05ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4163_A03_A05, mRNA sequence
Length = 398
Score = 168 bits (85), Expect = 3e-040
Identities = 177/207 (85%), Gaps = 1/207 (0%)
Strand = Plus / Plus
Query: 1 gctcaacgatctgatcctgctcaacagcggcatctcctcctgcatcccgcc-cgagatcg 59
||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 185 gctcaacgagctgatcctcctcaacagcggcatctcctcctgcatcccgccgngagatcg 244
Query: 60 gcaagctggccaagctcnccgtgctggacctcagcttcaccagcatcgccggcaccctgc 119
||||||||| ||||||| ||||||| |||||||||| || | |||||| ||||| ||||
Sbjct: 245 gcaagctggacaagctcaccgtgctcgacctcagctccaacggcatcgtcggcaagctgc 304
Query: 120 cggacacgatcggcaacatgcgggcgctggagcagctcgacgtcgcgcacaaccgcctcg 179
| ||||| |||||||| |||| || || ||||||||| ||||||| ||||| || |
Sbjct: 305 ccgacaccatcggcaatatgcatgccctcgagcagctcaacgtcgccaacaacatgcttg 364
Query: 180 ccggcgagataccggagagcgtctgcg 206
|||||||||| || |||||| ||||||
Sbjct: 365 ccggcgagatccccgagagcatctgcg 391
>gb|BQ839459.1|BQ839459 WHE4166_D03_H06ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4166_D03_H06, mRNA sequence
Length = 434
Score = 125 bits (63), Expect = 4e-027
Identities = 201/247 (81%)
Strand = Plus / Plus
Query: 137 atgcgggcgctggagcagctcgacgtcgcgcacaaccgcctcgccggcgagataccggag 196
||||| |||||||||||||| ||||| ||||||||| |||||||| | || ||||||
Sbjct: 141 atgcgcgcgctggagcagctggacgtggcgcacaacgagctcgccgggcacatcccggag 200
Query: 197 agcgtctgcggcctgccgcacctcaagaacttcacctactcgtacaacttcttctgcggc 256
|| |||||| ||||||| || |||||||||||||||||||||| ||||||||||
Sbjct: 201 ggcatctgcgcgctgccgcggctggccaacttcacctactcgtacaactacttctgcggc 260
Query: 257 gagccgcaccggtgcctcgaggtgccgcgcgtcgacgaccgccagaactgcatcgccggg 316
|||||| | |||||| | | ||| |||| ||||||||| |||||||||||||||||
Sbjct: 261 gagccggagcggtgcacggcgctgcggcgcaacgacgaccggcagaactgcatcgccggc 320
Query: 317 cgccccgaccagcgcccgggcgaggagtgcatctcgttcctgcaccagccgagggtgcgc 376
||||| |||||||| |||| || ||||| || |||||||||||| ||| ||||| |
Sbjct: 321 cgcccggaccagcggccggcggaccagtgcctcgcgttcctgcaccgcccgccggtgcac 380
Query: 377 tgcgacg 383
|||||||
Sbjct: 381 tgcgacg 387
Score = 46.1 bits (23), Expect = 0.003
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 1 gctcaacgatctgatcctgctcaacagcggcatctcctcctgcatcccgcccgagatcgg 60
||||||||| || || |||||||| ||||||| |||||||||||||| ||||||||
Sbjct: 5 gctcaacgagctcgtcatgctcaactccggcatccggtcctgcatcccgccggagatcgg 64
Query: 61 caagctggccaagctcnccgtgctggacctcagcttca 98
|||| | ||||| ||||||||||| | |||||||
Sbjct: 65 gtggctgcgcgagctcaccgtgctggacgtgagcttca 102
>gb|CD892775.1|CD892775 G118.121O12R010927 G118 Triticum aestivum cDNA clone G118121O12,
mRNA sequence
Length = 541
Score = 125 bits (63), Expect = 4e-027
Identities = 201/247 (81%)
Strand = Plus / Minus
Query: 137 atgcgggcgctggagcagctcgacgtcgcgcacaaccgcctcgccggcgagataccggag 196
||||| |||||||||||||| ||||| ||||||||| |||||||| | || ||||||
Sbjct: 432 atgcgcgcgctggagcagctggacgtggcgcacaacgagctcgccgggcacatcccggag 373
Query: 197 agcgtctgcggcctgccgcacctcaagaacttcacctactcgtacaacttcttctgcggc 256
|| |||||| ||||||| || |||||||||||||||||||||| ||||||||||
Sbjct: 372 ggcatctgcgcgctgccgcggctggccaacttcacctactcgtacaactacttctgcggc 313
Query: 257 gagccgcaccggtgcctcgaggtgccgcgcgtcgacgaccgccagaactgcatcgccggg 316
|||||| | |||||| | | ||| |||| ||||||||| |||||||||||||||||
Sbjct: 312 gagccggagcggtgcacggcgctgcggcgcaacgacgaccggcagaactgcatcgccggc 253
Query: 317 cgccccgaccagcgcccgggcgaggagtgcatctcgttcctgcaccagccgagggtgcgc 376
||||| |||||||| |||| || ||||| || |||||||||||| ||| ||||| |
Sbjct: 252 cgcccggaccagcggccggcggaccagtgcctcgcgttcctgcaccgcccgccggtgcac 193
Query: 377 tgcgacg 383
|||||||
Sbjct: 192 tgcgacg 186
>gb|BE430565.1|BE430565 SUN004.C06R991213 ITEC SUN Wheat cDNA Library Triticum aestivum
cDNA clone SUN004.C06, mRNA sequence
Length = 569
Score = 119 bits (60), Expect = 2e-025
Identities = 201/248 (81%)
Strand = Plus / Minus
Query: 143 gcgctggagcagctcgacgtcgcgcacaaccgcctcgccggcgagataccggagagcgtc 202
|||||||||||||||||||||||||||||| |||||||| | || |||||| || ||
Sbjct: 508 gcgctggagcagctcgacgtcgcgcacaacgagctcgccgggcacatcccggagggcatc 449
Query: 203 tgcggcctgccgcacctcaagaacttcacctactcgtacaacttcttctgcggcgagccg 262
|||| ||||| | || |||||||||||||||||||||| ||||||||||||||||
Sbjct: 448 tgcgcgctgccacggctggccaacttcacctactcgtacaactacttctgcggcgagccg 389
Query: 263 caccggtgcctcgaggtgccgcgcgtcgacgaccgccagaactgcatcgccgggcgcccc 322
| |||||| | | | | | |||| ||||||||| ||||||||||||||||| || ||
Sbjct: 388 gagcggtgcatggcgcttcggcgcaacgacgaccggcagaactgcatcgccggccgtccg 329
Query: 323 gaccagcgcccgggcgaggagtgcatctcgttcctgcaccagccgagggtgcgctgcgac 382
|||||||| |||| || ||||| || ||||||| |||| ||| ||||| |||||||
Sbjct: 328 gaccagcggccggcggaccagtgcctcgcgttcctacaccgcccgccggtgcactgcgac 269
Query: 383 gcccacgg 390
| ||||||
Sbjct: 268 ggccacgg 261
>gb|BQ743475.1|BQ743475 WHE4104_D09_H18ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4104_D09_H18, mRNA sequence
Length = 486
Score = 119 bits (60), Expect = 2e-025
Identities = 201/248 (81%)
Strand = Plus / Plus
Query: 143 gcgctggagcagctcgacgtcgcgcacaaccgcctcgccggcgagataccggagagcgtc 202
|||||||||||||||||||||||||||||| |||||||| | || |||||| || ||
Sbjct: 150 gcgctggagcagctcgacgtcgcgcacaacgagctcgccgggcacatcccggagggcatc 209
Query: 203 tgcggcctgccgcacctcaagaacttcacctactcgtacaacttcttctgcggcgagccg 262
|||| ||||| | || |||||||||||||||||||||| ||||||||||||||||
Sbjct: 210 tgcgcgctgccacggctggccaacttcacctactcgtacaactacttctgcggcgagccg 269
Query: 263 caccggtgcctcgaggtgccgcgcgtcgacgaccgccagaactgcatcgccgggcgcccc 322
| |||||| | | | | | |||| ||||||||| ||||||||||||||||| || ||
Sbjct: 270 gagcggtgcatggcgcttcggcgcaacgacgaccggcagaactgcatcgccggccgtccg 329
Query: 323 gaccagcgcccgggcgaggagtgcatctcgttcctgcaccagccgagggtgcgctgcgac 382
|||||||| |||| || ||||| || ||||||| |||| ||| ||||| |||||||
Sbjct: 330 gaccagcggccggcggaccagtgcctcgcgttcctacaccgcccgccggtgcactgcgac 389
Query: 383 gcccacgg 390
| ||||||
Sbjct: 390 ggccacgg 397
Score = 40.1 bits (20), Expect = 0.18
Identities = 43/51 (84%)
Strand = Plus / Plus
Query: 38 tcctgcatcccgcccgagatcggcaagctggccaagctcnccgtgctggac 88
|||||||||||||| |||||||| |||| | ||||| |||||||||||
Sbjct: 45 tcctgcatcccgccggagatcgggtggctgcgcgagctcaccgtgctggac 95
>gb|CK193805.1|CK193805 FGAS002222 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 897
Score = 113 bits (57), Expect = 2e-023
Identities = 195/241 (80%)
Strand = Plus / Minus
Query: 143 gcgctggagcagctcgacgtcgcgcacaaccgcctcgccggcgagataccggagagcgtc 202
||||||||||| || ||||| ||||||||| |||||||| | || || ||| || ||
Sbjct: 526 gcgctggagcacctggacgtggcgcacaacgagctcgccgggcacatcccagagggcatc 467
Query: 203 tgcggcctgccgcacctcaagaacttcacctactcgtacaacttcttctgcggcgagccg 262
|||| |||||||| || |||||||||||||||||||||| ||||||||||||||||
Sbjct: 466 tgcgcgctgccgcagctggccaacttcacctactcgtacaactacttctgcggcgagccg 407
Query: 263 caccggtgcctcgaggtgccgcgcgtcgacgaccgccagaactgcatcgccgggcgcccc 322
| |||||| | | ||| |||| ||||||||| ||||||||||||||||| |||||
Sbjct: 406 gagcggtgcacggcgctgcggcgcaacgacgaccggcagaactgcatcgccggccgcccg 347
Query: 323 gaccagcgcccgggcgaggagtgcatctcgttcctgcaccagccgagggtgcgctgcgac 382
|||||||| |||| || ||||| || |||||||||||| ||| ||||| |||||||
Sbjct: 346 gaccagcggccggcggaccagtgcctcgcgttcctgcaccgcccgccggtgcactgcgac 287
Query: 383 g 383
|
Sbjct: 286 g 286
>gb|CA663590.1|CA663590 wlmk1.pk0035.f2 wlmk1 Triticum aestivum cDNA clone wlmk1.pk0035.f2
5' end, mRNA sequence
Length = 533
Score = 111 bits (56), Expect = 6e-023
Identities = 158/193 (81%)
Strand = Plus / Minus
Query: 143 gcgctggagcagctcgacgtcgcgcacaaccgcctcgccggcgagataccggagagcgtc 202
|||||||||||||| ||||||||||||||| |||||||| | || |||||| || ||
Sbjct: 403 gcgctggagcagctngacgtcgcgcacaacgagctcgccgggcacatcccggagggcatc 344
Query: 203 tgcggcctgccgcacctcaagaacttcacctactcgtacaacttcttctgcggcgagccg 262
|||| | |||| || |||||||||||||||||||||| ||||||||||||||||
Sbjct: 343 tgcgcgntnccgcggctggccaacttcacctactcgtacaactacttctgcggcgagccg 284
Query: 263 caccggtgcctcgaggtgccgcgcgtcgacgaccgccagaactgcatcgccgggcgcccc 322
| |||||| | | | | | |||| ||||||||| ||||||||||||||||| |||||
Sbjct: 283 gagcggtgcatggcgctccggcgcaacgacgaccggcagaactgcatcgccggccgcccg 224
Query: 323 gaccagcgcccgg 335
|||||||| ||||
Sbjct: 223 gaccagcggccgg 211
>gb|CK208184.1|CK208184 FGAS019866 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1178
Score = 111 bits (56), Expect = 6e-023
Identities = 200/248 (80%)
Strand = Plus / Minus
Query: 143 gcgctggagcagctcgacgtcgcgcacaaccgcctcgccggcgagataccggagagcgtc 202
|||||||||||||||||||||||||||||| |||||||| | || |||||| || ||
Sbjct: 459 gcgctggagcagctcgacgtcgcgcacaacgagctcgccgggcacatcccggagggcatc 400
Query: 203 tgcggcctgccgcacctcaagaacttcacctactcgtacaacttcttctgcggcgagccg 262
|||| ||||| | || |||||||||||||||||||||| ||||||||||||||||
Sbjct: 399 tgcgcgctgccacggctggccaacttcacctactcgtacaactacttctgcggcgagccg 340
Query: 263 caccggtgcctcgaggtgccgcgcgtcgacgaccgccagaactgcatcgccgggcgcccc 322
| |||||| | | | | | |||| ||||||||| |||||||||||||||| || ||
Sbjct: 339 gagcggtgcatggcgcttcggcgcaacgacgaccggcagaactgcatcgccgcccgtccg 280
Query: 323 gaccagcgcccgggcgaggagtgcatctcgttcctgcaccagccgagggtgcgctgcgac 382
|||||||| |||| || ||||| || ||||||| |||| ||| ||||| |||||||
Sbjct: 279 gaccagcggccggcggaccagtgcctcgcgttcctacaccgcccgccggtgcactgcgac 220
Query: 383 gcccacgg 390
| ||||||
Sbjct: 219 ggccacgg 212
Score = 42.1 bits (21), Expect = 0.047
Identities = 71/88 (80%)
Strand = Plus / Minus
Query: 1 gctcaacgatctgatcctgctcaacagcggcatctcctcctgcatcccgcccgagatcgg 60
||||||||| || || |||||||| ||||||| |||||||||||||| ||||||||
Sbjct: 601 gctcaacgagctcgtcatgctcaactccggcatccggtcctgcatcccgccggagatcgg 542
Query: 61 caagctggccaagctcnccgtgctggac 88
|||| | ||||| |||||||||||
Sbjct: 541 gtggctgcgcgagctcaccgtgctggac 514
>gb|CK212514.1|CK212514 FGAS024389 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1094
Score = 109 bits (55), Expect = 2e-022
Identities = 199/247 (80%)
Strand = Plus / Minus
Query: 137 atgcgggcgctggagcagctcgacgtcgcgcacaaccgcctcgccggcgagataccggag 196
||||| |||||||||||||| ||||| ||||||||| |||||||| | || ||||||
Sbjct: 530 atgcgcgcgctggagcagctggacgtggcgcacaacgagctcgccgggcacatcccggag 471
Query: 197 agcgtctgcggcctgccgcacctcaagaacttcacctactcgtacaacttcttctgcggc 256
|| |||||| || |||| || |||||||||||||||||||||| ||||| ||||
Sbjct: 470 ggcatctgcgcgcttccgcggctggccaacttcacctactcgtacaactacttctccggc 411
Query: 257 gagccgcaccggtgcctcgaggtgccgcgcgtcgacgaccgccagaactgcatcgccggg 316
|||||| | |||||| | | ||| |||| ||||||||| |||||||||||||||||
Sbjct: 410 gagccggagcggtgcacggcgctgcggcgcaacgacgaccggcagaactgcatcgccggc 351
Query: 317 cgccccgaccagcgcccgggcgaggagtgcatctcgttcctgcaccagccgagggtgcgc 376
||||| |||||||| |||| || ||||| || |||||||||||| ||| ||||| |
Sbjct: 350 cgcccggaccagcggccggcggaccagtgcctcgcgttcctgcaccgcccgccggtgcac 291
Query: 377 tgcgacg 383
|||||||
Sbjct: 290 tgcgacg 284
Score = 46.1 bits (23), Expect = 0.003
Identities = 79/98 (80%)
Strand = Plus / Minus
Query: 1 gctcaacgatctgatcctgctcaacagcggcatctcctcctgcatcccgcccgagatcgg 60
||||||||| || || |||||||| ||||||| |||||||||||||| ||||||||
Sbjct: 666 gctcaacgagctcgtcatgctcaactccggcatccggtcctgcatcccgccggagatcgg 607
Query: 61 caagctggccaagctcnccgtgctggacctcagcttca 98
|||| | ||||| ||||||||||| | |||||||
Sbjct: 606 gtggctgcgcgagctcaccgtgctggacgtgagcttca 569
>gb|BM140348.1|BM140348 WHE0474_b06_d12zS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0474_b06_d12,
mRNA sequence
Length = 425
Score = 103 bits (52), Expect = 1e-020
Identities = 97/112 (86%)
Strand = Plus / Plus
Query: 224 aacttcacctactcgtacaacttcttctgcggcgagccgcaccggtgcctcgaggtgccg 283
|||||||||||||||||||||| |||||||||||||||| | |||||| | | | | | |
Sbjct: 50 aacttcacctactcgtacaactacttctgcggcgagccggagcggtgcatggcgctccgg 109
Query: 284 cgcgtcgacgaccgccagaactgcatcgccgggcgccccgaccagcgcccgg 335
||| ||||||||| ||||||||||||||||| ||||| |||||||| ||||
Sbjct: 110 cgcaacgacgaccggcagaactgcatcgccggccgcccggaccagcggccgg 161
>gb|BE428750.1|BE428750 MTD010.D12F990617 ITEC MTD Durum Wheat Root Library Triticum
turgidum subsp. durum cDNA clone MTD010.D12, mRNA
sequence
Length = 400
Score = 89.7 bits (45), Expect = 2e-016
Identities = 108/129 (83%)
Strand = Plus / Plus
Query: 143 gcgctggagcagctcgacgtcgcgcacaaccgcctcgccggcgagataccggagagcgtc 202
|||||||||||||||||||||||||||||| |||||||| | || |||||| || ||
Sbjct: 240 gcgctggagcagctcgacgtcgcgcacaacgagctcgccgggcacatcccggagggcatc 299
Query: 203 tgcggcctgccgcacctcaagaacttcacctactcgtacaacttcttctgcggcgagccg 262
|||| ||||| | || |||||||||||||||||||||| ||||||||||||||||
Sbjct: 300 tgcgcgctgccacggctggccaacttcacctactcgtacaactacttctgcggcgagccg 359
Query: 263 caccggtgc 271
| ||||||
Sbjct: 360 gagcggtgc 368
Score = 42.1 bits (21), Expect = 0.047
Identities = 71/88 (80%)
Strand = Plus / Plus
Query: 1 gctcaacgatctgatcctgctcaacagcggcatctcctcctgcatcccgcccgagatcgg 60
||||||||| || || |||||||| ||||||| |||||||||||||| ||||||||
Sbjct: 98 gctcaacgagctcgtcatgctcaactccggcatccggtcctgcatcccgccggagatcgg 157
Query: 61 caagctggccaagctcnccgtgctggac 88
|||| | ||||| |||||||||||
Sbjct: 158 gtggctgcgcgagctcaccgtgctggac 185
>gb|BE429018.1|BE429018 MTD013.D05F990621 ITEC MTD Durum Wheat Root Library Triticum
turgidum subsp. durum cDNA clone MTD013.D05, mRNA
sequence
Length = 402
Score = 89.7 bits (45), Expect = 2e-016
Identities = 108/129 (83%)
Strand = Plus / Plus
Query: 143 gcgctggagcagctcgacgtcgcgcacaaccgcctcgccggcgagataccggagagcgtc 202
|||||||||||||||||||||||||||||| |||||||| | || |||||| || ||
Sbjct: 240 gcgctggagcagctcgacgtcgcgcacaacgagctcgccgggcacatcccggagggcatc 299
Query: 203 tgcggcctgccgcacctcaagaacttcacctactcgtacaacttcttctgcggcgagccg 262
|||| ||||| | || |||||||||||||||||||||| ||||||||||||||||
Sbjct: 300 tgcgcgctgccacggctggccaacttcacctactcgtacaactacttctgcggcgagccg 359
Query: 263 caccggtgc 271
| ||||||
Sbjct: 360 gagcggtgc 368
Score = 42.1 bits (21), Expect = 0.047
Identities = 71/88 (80%)
Strand = Plus / Plus
Query: 1 gctcaacgatctgatcctgctcaacagcggcatctcctcctgcatcccgcccgagatcgg 60
||||||||| || || |||||||| ||||||| |||||||||||||| ||||||||
Sbjct: 98 gctcaacgagctcgtcatgctcaactccggcatccggtcctgcatcccgccggagatcgg 157
Query: 61 caagctggccaagctcnccgtgctggac 88
|||| | ||||| |||||||||||
Sbjct: 158 gtggctgcgcgagctcaccgtgctggac 185
>gb|CA712741.1|CA712741 wdk3c.pk006.d13 wdk3c Triticum aestivum cDNA clone wdk3c.pk006.d13
5' end, mRNA sequence
Length = 554
Score = 77.8 bits (39), Expect = 8e-013
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 145 gctggagcagctcgacgtcgcgcacaaccgcctcgccggcgagataccggagagcgtctg 204
||||||||||||| ||||||||||||||| ||| ||||| ||||||| || ||| ||
Sbjct: 315 gctggagcagctcaacgtcgcgcacaacctgctctccggcccgataccgcaggccgtgtg 256
Query: 205 cggcctgccgcacctcaagaacttcacctactcgtacaacttcttctgcggcgagccgc 263
|| ||||||| |||||||| ||||||| ||| |||||||||||| ||| |||||||
Sbjct: 255 cgcgctgccgcggctcaagaatttcaccttctcatacaacttcttcaccggggagccgc 197
>gb|CD927363.1|CD927363 GR45.101O13F010315 GR45 Triticum aestivum cDNA clone GR45101O13,
mRNA sequence
Length = 264
Score = 69.9 bits (35), Expect = 2e-010
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 289 cgacgaccgccagaactgcatcgccgggcgccccgaccagcgcccgggcgaggagtgcat 348
||||||||| ||||||||||||||||| ||||| |||||||| |||| || ||||| |
Sbjct: 31 cgacgaccggcagaactgcatcgccggccgcccggaccagcggccggcggaccagtgcct 90
Query: 349 ctcgttcctgcaccagccgagggtgcgctgcgacg 383
| |||||||||||| ||| ||||| ||||||||
Sbjct: 91 cgcgttcctgcaccgcccgccggtgcactgcgacg 125
>gb|BJ277768.1|BJ277768 BJ277768 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr13a05 5', mRNA sequence
Length = 524
Score = 67.9 bits (34), Expect = 8e-010
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 14 atcctgctcaacagcggcatctcctcctgcatcccgcccgagatcggcaagctg 67
||||||||||||| | ||||| ||||||||||||||| |||||||||||||||
Sbjct: 172 atcctgctcaacaccagcatcagctcctgcatcccgccggagatcggcaagctg 225
>gb|AL826574.1|AL826574 AL826574 p:537 Triticum aestivum cDNA clone H04_p537_plate_4, mRNA
sequence
Length = 461
Score = 67.9 bits (34), Expect = 8e-010
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 14 atcctgctcaacagcggcatctcctcctgcatcccgcccgagatcggcaagctggccaag 73
||||||||||||| | ||||| ||||||||||||||| ||||||||| ||||| |||
Sbjct: 245 atcctgctcaacaccagcatcagctcctgcatcccgccggagatcggccagctgaagaag 304
Query: 74 ctcnccgtgctggacctcagc 94
||| |||||||||||||||
Sbjct: 305 ctcaaggtgctggacctcagc 325
>gb|CV778727.1|CV778727 FGAS073136 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 816
Score = 63.9 bits (32), Expect = 1e-008
Identities = 85/103 (82%)
Strand = Plus / Plus
Query: 1 gctcaacgatctgatcctgctcaacagcggcatctcctcctgcatcccgcccgagatcgg 60
||||||||| || || |||||||| ||||||| |||||||||||||| ||||||||
Sbjct: 602 gctcaacgagctcgtcatgctcaactccggcatccggtcctgcatcccgccggagatcgg 661
Query: 61 caagctggccaagctcnccgtgctggacctcagcttcaccagc 103
|||| || ||||| ||||||||||| | ||||||||||||
Sbjct: 662 gtggctgcccgagctcaccgtgctggacgtgagcttcaccagc 704
>gb|BE606424.1|BE606424 WHE0904_G11_N22ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0904_G11_N22, mRNA sequence
Length = 537
Score = 60.0 bits (30), Expect = 2e-007
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 218 ctcaagaacttcacctactcgtacaacttcttctgcggcgagccgc 263
|||||||||||||||| ||| |||||||||||| |||||||||||
Sbjct: 341 ctcaagaacttcaccttctcctacaacttcttcaccggcgagccgc 386
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 147 tggagcagctcgacgtcgcgcacaacc 173
|||||||||||||| ||||||||||||
Sbjct: 270 tggagcagctcgacatcgcgcacaacc 296
>gb|BJ281306.1|BJ281306 BJ281306 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr21g20 5', mRNA sequence
Length = 600
Score = 60.0 bits (30), Expect = 2e-007
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 143 gcgctggagcagctcgacgtcgcgcacaac 172
||||||||||||||||||||||||||||||
Sbjct: 532 gcgctggagcagctcgacgtcgcgcacaac 561
Score = 46.1 bits (23), Expect = 0.003
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 1 gctcaacgatctgatcctgctcaacagcggcatctcctcctgcatcccgcccgagatcgg 60
||||||||| || || |||||||| ||||||| |||||||||||||| ||||||||
Sbjct: 390 gctcaacgagctcgtcatgctcaactccggcatccggtcctgcatcccgccggagatcgg 449
Query: 61 caagctggccaagctcnccgtgctggacctcagcttca 98
|||| | ||||| ||||||||||| | |||||||
Sbjct: 450 gtggctgcgcgagctcaccgtgctggacgtgagcttca 487
>gb|CN012120.1|CN012120 WHE3892_G05_M10ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3892_G05_M10,
mRNA sequence
Length = 653
Score = 60.0 bits (30), Expect = 2e-007
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 218 ctcaagaacttcacctactcgtacaacttcttctgcggcgagccgc 263
|||||||||||||||| ||| |||||||||||| |||||||||||
Sbjct: 450 ctcaagaacttcaccttctcctacaacttcttcaccggcgagccgc 495
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 147 tggagcagctcgacgtcgcgcacaacc 173
|||||||||||||| ||||||||||||
Sbjct: 379 tggagcagctcgacatcgcgcacaacc 405
>gb|DR736794.1|DR736794 FGAS082164 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1120
Score = 60.0 bits (30), Expect = 2e-007
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 143 gcgctggagcagctcgacgtcgcgcacaac 172
||||||||||||||||||||||||||||||
Sbjct: 872 gcgctggagcagctcgacgtcgcgcacaac 901
Score = 42.1 bits (21), Expect = 0.047
Identities = 71/88 (80%)
Strand = Plus / Plus
Query: 1 gctcaacgatctgatcctgctcaacagcggcatctcctcctgcatcccgcccgagatcgg 60
||||||||| || || |||||||| ||||||| |||||||||||||| ||||||||
Sbjct: 730 gctcaacgagctcgtcatgctcaactccggcatccggtcctgcatcccgccggagatcgg 789
Query: 61 caagctggccaagctcnccgtgctggac 88
|||| | ||||| |||||||||||
Sbjct: 790 gtggctgcgcgagctcaccgtgctggac 817
>gb|BJ277982.1|BJ277982 BJ277982 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr14a05 5', mRNA sequence
Length = 286
Score = 56.0 bits (28), Expect = 3e-006
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 14 atcctgctcaacagcggcatctcctcctgcatcccgcccgagatcggc 61
||||||||||||| | ||||| ||||||||||||||| |||||||||
Sbjct: 119 atcctgctcaacaccagcatcagctcctgcatcccgccggagatcggc 166
>gb|BM068644.1|BM068644 WHE3461_A09_B17ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE3461_A09_B17, mRNA sequence
Length = 517
Score = 46.1 bits (23), Expect = 0.003
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 225 acttcacctactcgtacaacttcttctgcggcgagccgc 263
||||||||| ||| |||||||||||| |||||||||||
Sbjct: 1 acttcaccttctcctacaacttcttcaccggcgagccgc 39
>gb|AL814447.1|AL814447 AL814447 h:116 Triticum aestivum cDNA clone B04_h116_plate_11, mRNA
sequence
Length = 581
Score = 46.1 bits (23), Expect = 0.003
Identities = 95/119 (79%)
Strand = Plus / Plus
Query: 145 gctggagcagctcgacgtcgcgcacaaccgcctcgccggcgagataccggagagcgtctg 204
||||||||| ||| ||||||||||||||| ||| |||| |||||| || ||| ||
Sbjct: 338 gctggagcaactcaacgtcgcgcacaacctgctctccgggccgataccccaggccgtgtg 397
Query: 205 cggcctgccgcacctcaagaacttcacctactcgtacaacttcttctgcggcgagccgc 263
| ||||||| |||||||||||||||| ||| ||||| |||||| ||| |||||||
Sbjct: 398 tgctctgccgcggctcaagaacttcaccttctcatacaatttcttcaccggggagccgc 456
>gb|DR739330.1|DR739330 FGAS084547 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1116
Score = 46.1 bits (23), Expect = 0.003
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 1 gctcaacgatctgatcctgctcaacagcggcatctcctcctgcatcccgcccgagatcgg 60
||||||||| || || |||||||| ||||||| |||||||||||||| ||||||||
Sbjct: 782 gctcaacgagctcgtcatgctcaactccggcatccggtcctgcatcccgccggagatcgg 841
Query: 61 caagctggccaagctcnccgtgctggacctcagcttca 98
|||| | ||||| ||||||||||| | |||||||
Sbjct: 842 gtggctgcgcgagctcaccgtgctggacgtgagcttca 879
>gb|BU672400.1|BU672400 WHE3304_E01_J02ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3304_E01_J02,
mRNA sequence
Length = 421
Score = 44.1 bits (22), Expect = 0.012
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 191 ccggagagcgtctgcggcctgccgcacctcaagaacttcacctactcgtacaacttcttc 250
|||| |||||||||||| |||||| || | ||||||||||||| | |||||||||||
Sbjct: 196 ccggcgagcgtctgcgggctgccgagtctgaggaacttcacctacgaggacaacttcttc 255
Query: 251 tgcggc 256
| ||||
Sbjct: 256 tccggc 261
>gb|CK215270.1|CK215270 FGAS027225 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 728
Score = 42.1 bits (21), Expect = 0.047
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 176 ctcgccggcgagataccggag 196
|||||||||||||||||||||
Sbjct: 215 ctcgccggcgagataccggag 195
>gb|BJ281411.1|BJ281411 BJ281411 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr21o17 5', mRNA sequence
Length = 681
Score = 40.1 bits (20), Expect = 0.18
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 411 cgccacctccacctccacct 430
||||||||||||||||||||
Sbjct: 251 cgccacctccacctccacct 232
>gb|BJ286479.1|BJ286479 BJ286479 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr21o17 3', mRNA sequence
Length = 748
Score = 40.1 bits (20), Expect = 0.18
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 411 cgccacctccacctccacct 430
||||||||||||||||||||
Sbjct: 490 cgccacctccacctccacct 509
>gb|CD868336.1|CD868336 AZO2.108J07F001113 AZO2 Triticum aestivum cDNA clone AZO2108J07,
mRNA sequence
Length = 647
Score = 40.1 bits (20), Expect = 0.18
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 411 cgccacctccacctccacct 430
||||||||||||||||||||
Sbjct: 70 cgccacctccacctccacct 51
>gb|CK204808.1|CK204808 FGAS013344 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 849
Score = 40.1 bits (20), Expect = 0.18
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 411 cgccacctccacctccacct 430
||||||||||||||||||||
Sbjct: 433 cgccacctccacctccacct 452
>gb|CK205166.1|CK205166 FGAS013703 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 862
Score = 40.1 bits (20), Expect = 0.18
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 411 cgccacctccacctccacct 430
||||||||||||||||||||
Sbjct: 434 cgccacctccacctccacct 453
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 187,579
Number of Sequences: 636343
Number of extensions: 187579
Number of successful extensions: 57929
Number of sequences better than 0.5: 37
Number of HSP's better than 0.5 without gapping: 36
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 57813
Number of HSP's gapped (non-prelim): 87
length of query: 649
length of database: 367,240,239
effective HSP length: 19
effective length of query: 630
effective length of database: 355,149,722
effective search space: 223744324860
effective search space used: 223744324860
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)