BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 33531.2.1
(724 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA639556.1|CA639556 wre1n.pk0024.g4 wre1n Triticum aesti... 107 1e-021
gb|BE418580.1|BE418580 SCL072.A05R990707 ITEC SCL Wheat Lea... 101 7e-020
gb|BM136641.1|BM136641 WHE2615_D11_H21ZS Wheat Fusarium gra... 72 6e-011
gb|CD373935.1|CD373935 WHE2615_D11_H21ZT Sumai3 Wheat Fusar... 72 6e-011
gb|CD930219.1|CD930219 GR45.110K14F010418 GR45 Triticum aes... 72 6e-011
gb|CD933682.1|CD933682 GR45.121K24F010719 GR45 Triticum aes... 72 6e-011
gb|CD933683.1|CD933683 GR45.121K24R010831 GR45 Triticum aes... 72 6e-011
gb|BJ293206.1|BJ293206 BJ293206 Y. Ogihara unpublished cDNA... 70 2e-010
gb|BJ299593.1|BJ299593 BJ299593 Y. Ogihara unpublished cDNA... 70 2e-010
gb|BQ609347.1|BQ609347 BRY_5272 wheat EST endosperm library... 70 2e-010
gb|BQ609396.1|BQ609396 BRY_5323 wheat EST endosperm library... 70 2e-010
gb|AL830760.1|AL830760 AL830760 q:242 Triticum aestivum cDN... 70 2e-010
gb|CA709246.1|CA709246 wdk2c.pk012.k19 wdk2c Triticum aesti... 70 2e-010
gb|CA709359.1|CA709359 wdk2c.pk012.d4 wdk2c Triticum aestiv... 70 2e-010
gb|CA710083.1|CA710083 wdk2c.pk017.p9 wdk2c Triticum aestiv... 70 2e-010
gb|CA710890.1|CA710890 wdk2c.pk014.a12 wdk2c Triticum aesti... 70 2e-010
gb|CA716656.1|CA716656 wdk3c.pk025.k19 wdk3c Triticum aesti... 70 2e-010
gb|CD887221.1|CD887221 G118.104I24F010605 G118 Triticum aes... 70 2e-010
gb|CD899934.1|CD899934 G174.114A17F010824 G174 Triticum aes... 70 2e-010
gb|CD932765.1|CD932765 GR45.118P14F010718 GR45 Triticum aes... 70 2e-010
gb|AL810395.1|AL810395 AL810395 e:29 Triticum aestivum cDNA... 70 2e-010
gb|CV065474.1|CV065474 WNEL22g3 Wheat EST endosperm library... 70 2e-010
gb|CV066840.1|CV066840 WNEL9H9 Wheat EST endosperm library ... 70 2e-010
emb|AX660812.1| Sequence 1169 from Patent WO03000906 70 2e-010
gb|BE399425.1|BE399425 WHE0036.B04F990516 ITEC WHE Wheat En... 62 6e-008
gb|BE423382.1|BE423382 WHE0065_E03_J05ZS Wheat endosperm cD... 62 6e-008
gb|BE423973.1|BE423973 WHE0066_E03_J06ZS Wheat endosperm cD... 62 6e-008
gb|CA704365.1|CA704365 wdk1c.pk012.c22 wdk1c Triticum aesti... 62 6e-008
gb|CA709840.1|CA709840 wdk2c.pk011.e5 wdk2c Triticum aestiv... 62 6e-008
gb|CA712957.1|CA712957 wdk3c.pk008.i7 wdk3c Triticum aestiv... 62 6e-008
gb|CD911453.1|CD911453 G550.111C16F010521 G550 Triticum aes... 62 6e-008
gb|CV065703.1|CV065703 WNEL25f4 Wheat EST endosperm library... 62 6e-008
gb|CV065976.1|CV065976 WNEL29a7 Wheat EST endosperm library... 62 6e-008
emb|AX642424.1| Sequence 80 from Patent WO02083901 62 6e-008
tpg|BK000132.1| TPA: Triticum aestivum putative phytosulfok... 62 6e-008
gb|AW448437.1|AW448437 BRY_750 BRY Triticum aestivum cDNA c... 56 3e-006
gb|BQ609821.1|BQ609821 BRY_750 wheat EST endosperm library ... 56 3e-006
gb|BE399087.1|BE399087 WHE0030.D10F990514 ITEC WHE Wheat En... 54 1e-005
gb|CA710973.1|CA710973 wdk2c.pk019.i5 wdk2c Triticum aestiv... 44 0.013
gb|CA595038.1|CA595038 wpa1c.pk008.l13 wpa1c Triticum aesti... 42 0.052
gb|CA710903.1|CA710903 wdk2c.pk018.b22 wdk2c Triticum aesti... 42 0.052
gb|CA633511.1|CA633511 wle1n.pk0072.h9 wle1n Triticum aesti... 40 0.21
>gb|CA639556.1|CA639556 wre1n.pk0024.g4 wre1n Triticum aestivum cDNA clone wre1n.pk0024.g4
5' end, mRNA sequence
Length = 557
Score = 107 bits (54), Expect = 1e-021
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 289 ggagtgcctgatgaggaggacgttgctcgctcacaccgactacatctacacccaggggaa 348
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 263 ggagtgcctgatgaggaggaccctcgtcgctcacaccgactacatctacacccaggggaa 322
Query: 349 gcacaactag 358
||||||||||
Sbjct: 323 gcacaactag 332
>gb|BE418580.1|BE418580 SCL072.A05R990707 ITEC SCL Wheat Leaf Library Triticum aestivum
cDNA clone SCL072.A05, mRNA sequence
Length = 467
Score = 101 bits (51), Expect = 7e-020
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 289 ggagtgcctgatgaggaggacgttgctcgctcacaccgactacatctacacccaggggaa 348
||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||
Sbjct: 270 ggagtgcctgatgaggaggaccctcgtcgctcacaccgactacatntacacccaggggaa 329
Query: 349 gcacaactag 358
||||||||||
Sbjct: 330 gcacaactag 339
>gb|BM136641.1|BM136641 WHE2615_D11_H21ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2615_D11_H21,
mRNA sequence
Length = 441
Score = 71.9 bits (36), Expect = 6e-011
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 290 gagtgcctgatgaggaggacgttgctcgctcacaccgactacatctacacccaggg 345
|||||| |||||||||||||| || | || ||||||||||||||||||||||||||
Sbjct: 94 gagtgcttgatgaggaggacgctggtggcgcacaccgactacatctacacccaggg 149
>gb|CD373935.1|CD373935 WHE2615_D11_H21ZT Sumai3 Wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
WHE2615_D11_H21, mRNA sequence
Length = 501
Score = 71.9 bits (36), Expect = 6e-011
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 290 gagtgcctgatgaggaggacgttgctcgctcacaccgactacatctacacccaggg 345
|||||| |||||||||||||| || | || ||||||||||||||||||||||||||
Sbjct: 379 gagtgcttgatgaggaggacgctggtggcgcacaccgactacatctacacccaggg 324
>gb|CD930219.1|CD930219 GR45.110K14F010418 GR45 Triticum aestivum cDNA clone GR45110K14,
mRNA sequence
Length = 628
Score = 71.9 bits (36), Expect = 6e-011
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 290 gagtgcctgatgaggaggacgttgctcgctcacaccgactacatctacacccaggg 345
|||||| |||||||||||||| || | || ||||||||||||||||||||||||||
Sbjct: 325 gagtgcttgatgaggaggacgctggtggcgcacaccgactacatctacacccaggg 380
>gb|CD933682.1|CD933682 GR45.121K24F010719 GR45 Triticum aestivum cDNA clone GR45121K24,
mRNA sequence
Length = 539
Score = 71.9 bits (36), Expect = 6e-011
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 290 gagtgcctgatgaggaggacgttgctcgctcacaccgactacatctacacccaggg 345
|||||| |||||||||||||| || | || ||||||||||||||||||||||||||
Sbjct: 336 gagtgcttgatgaggaggacgctggtggcgcacaccgactacatctacacccaggg 391
>gb|CD933683.1|CD933683 GR45.121K24R010831 GR45 Triticum aestivum cDNA clone GR45121K24,
mRNA sequence
Length = 630
Score = 71.9 bits (36), Expect = 6e-011
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 290 gagtgcctgatgaggaggacgttgctcgctcacaccgactacatctacacccaggg 345
|||||| |||||||||||||| || | || ||||||||||||||||||||||||||
Sbjct: 327 gagtgcttgatgaggaggacgctggtggcgcacaccgactacatctacacccaggg 272
>gb|BJ293206.1|BJ293206 BJ293206 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl31c05 5', mRNA sequence
Length = 316
Score = 69.9 bits (35), Expect = 2e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||||||||||||||||||||||| |||||||||||||
Sbjct: 83 cacaccgactacatctacacccaggagaagcacaactag 121
>gb|BJ299593.1|BJ299593 BJ299593 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl31c05 3', mRNA sequence
Length = 252
Score = 69.9 bits (35), Expect = 2e-010
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||||||||||||||||||||||| |||||||||||||
Sbjct: 192 cacaccgactacatctacacccaggagaagcacaactag 154
>gb|BQ609347.1|BQ609347 BRY_5272 wheat EST endosperm library Triticum aestivum cDNA 5',
mRNA sequence
Length = 536
Score = 69.9 bits (35), Expect = 2e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||||||||||||||||||||||| |||||||||||||
Sbjct: 296 cacaccgactacatctacacccaggagaagcacaactag 334
>gb|BQ609396.1|BQ609396 BRY_5323 wheat EST endosperm library Triticum aestivum cDNA 5',
mRNA sequence
Length = 536
Score = 69.9 bits (35), Expect = 2e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||||||||||||||||||||||| |||||||||||||
Sbjct: 296 cacaccgactacatctacacccaggagaagcacaactag 334
>gb|AL830760.1|AL830760 AL830760 q:242 Triticum aestivum cDNA clone F04_q242_plate_11, mRNA
sequence
Length = 393
Score = 69.9 bits (35), Expect = 2e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||||||||||||||||||||||| |||||||||||||
Sbjct: 228 cacaccgactacatctacacccaggagaagcacaactag 266
>gb|CA709246.1|CA709246 wdk2c.pk012.k19 wdk2c Triticum aestivum cDNA clone wdk2c.pk012.k19
5' end, mRNA sequence
Length = 485
Score = 69.9 bits (35), Expect = 2e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 cacaccgactacatctacacccaggagaagcacaactag 299
>gb|CA709359.1|CA709359 wdk2c.pk012.d4 wdk2c Triticum aestivum cDNA clone wdk2c.pk012.d4 5'
end, mRNA sequence
Length = 403
Score = 69.9 bits (35), Expect = 2e-010
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||||||||||||||||||||||| |||||||||||||
Sbjct: 224 cacaccgactacatctacacccaggagaagcacaactag 186
>gb|CA710083.1|CA710083 wdk2c.pk017.p9 wdk2c Triticum aestivum cDNA clone wdk2c.pk017.p9 5'
end, mRNA sequence
Length = 440
Score = 69.9 bits (35), Expect = 2e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||||||||||||||||||||||| |||||||||||||
Sbjct: 267 cacaccgactacatctacacccaggagaagcacaactag 305
>gb|CA710890.1|CA710890 wdk2c.pk014.a12 wdk2c Triticum aestivum cDNA clone wdk2c.pk014.a12
5' end, mRNA sequence
Length = 434
Score = 69.9 bits (35), Expect = 2e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||||||||||||||||||||||| |||||||||||||
Sbjct: 327 cacaccgactacatctacacccaggagaagcacaactag 365
>gb|CA716656.1|CA716656 wdk3c.pk025.k19 wdk3c Triticum aestivum cDNA clone wdk3c.pk025.k19
5' end, mRNA sequence
Length = 414
Score = 69.9 bits (35), Expect = 2e-010
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||||||||||||||||||||||| |||||||||||||
Sbjct: 234 cacaccgactacatctacacccaggagaagcacaactag 196
>gb|CD887221.1|CD887221 G118.104I24F010605 G118 Triticum aestivum cDNA clone G118104I24,
mRNA sequence
Length = 317
Score = 69.9 bits (35), Expect = 2e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||||||||||||||||||||||| |||||||||||||
Sbjct: 64 cacaccgactacatctacacccaggagaagcacaactag 102
>gb|CD899934.1|CD899934 G174.114A17F010824 G174 Triticum aestivum cDNA clone G174114A17,
mRNA sequence
Length = 534
Score = 69.9 bits (35), Expect = 2e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||||||||||||||||||||||| |||||||||||||
Sbjct: 289 cacaccgactacatctacacccaggagaagcacaactag 327
>gb|CD932765.1|CD932765 GR45.118P14F010718 GR45 Triticum aestivum cDNA clone GR45118P14,
mRNA sequence
Length = 508
Score = 69.9 bits (35), Expect = 2e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||||||||||||||||||||||| |||||||||||||
Sbjct: 285 cacaccgactacatctacacccaggagaagcacaactag 323
>gb|AL810395.1|AL810395 AL810395 e:29 Triticum aestivum cDNA clone A07_e29_plate_2, mRNA
sequence
Length = 363
Score = 69.9 bits (35), Expect = 2e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||||||||||||||||||||||| |||||||||||||
Sbjct: 307 cacaccgactacatctacacccaggagaagcacaactag 345
>gb|CV065474.1|CV065474 WNEL22g3 Wheat EST endosperm library Triticum aestivum cDNA clone
WNEL22g3 5' similar to TPA: Triticum aestivum putative
phytosulfokine peptide precursor, mRNA sequence
Length = 433
Score = 69.9 bits (35), Expect = 2e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||||||||||||||||||||||| |||||||||||||
Sbjct: 156 cacaccgactacatctacacccaggagaagcacaactag 194
>gb|CV066840.1|CV066840 WNEL9H9 Wheat EST endosperm library Triticum aestivum cDNA clone
WNEL9H9 5' similar to TPA: Triticum aestivum putative
phytosulfokine peptide precursor, mRNA sequence
Length = 372
Score = 69.9 bits (35), Expect = 2e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||||||||||||||||||||||| |||||||||||||
Sbjct: 128 cacaccgactacatctacacccaggagaagcacaactag 166
>emb|AX660812.1| Sequence 1169 from Patent WO03000906
Length = 237
Score = 69.9 bits (35), Expect = 2e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||||||||||||||||||||||| |||||||||||||
Sbjct: 79 cacaccgactacatctacacccaggagaagcacaactag 117
>gb|BE399425.1|BE399425 WHE0036.B04F990516 ITEC WHE Wheat Endosperm Library Triticum
aestivum cDNA clone WHE0036.B04, mRNA sequence
Length = 224
Score = 61.9 bits (31), Expect = 6e-008
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
|||||||||||||| |||||||||| |||||||||||||
Sbjct: 221 cacaccgactacatttacacccaggagaagcacaactag 183
>gb|BE423382.1|BE423382 WHE0065_E03_J05ZS Wheat endosperm cDNA library Triticum aestivum
cDNA clone WHE0065_E03_J05, mRNA sequence
Length = 466
Score = 61.9 bits (31), Expect = 6e-008
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||| ||||||||||||||||||| |||||||||||||
Sbjct: 201 cacacggactacatctacacccaggagaagcacaactag 163
>gb|BE423973.1|BE423973 WHE0066_E03_J06ZS Wheat endosperm cDNA library Triticum aestivum
cDNA clone WHE0066_E03_J06, mRNA sequence
Length = 467
Score = 61.9 bits (31), Expect = 6e-008
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||| ||||||||||||||||||| |||||||||||||
Sbjct: 202 cacacggactacatctacacccaggagaagcacaactag 164
>gb|CA704365.1|CA704365 wdk1c.pk012.c22 wdk1c Triticum aestivum cDNA clone wdk1c.pk012.c22
5' end, mRNA sequence
Length = 459
Score = 61.9 bits (31), Expect = 6e-008
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||| ||||||||||||||||||| |||||||||||||
Sbjct: 227 cacacggactacatctacacccaggagaagcacaactag 189
>gb|CA709840.1|CA709840 wdk2c.pk011.e5 wdk2c Triticum aestivum cDNA clone wdk2c.pk011.e5 5'
end, mRNA sequence
Length = 553
Score = 61.9 bits (31), Expect = 6e-008
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||| ||||||||||||||||||| |||||||||||||
Sbjct: 262 cacacggactacatctacacccaggagaagcacaactag 300
>gb|CA712957.1|CA712957 wdk3c.pk008.i7 wdk3c Triticum aestivum cDNA clone wdk3c.pk008.i7 5'
end, mRNA sequence
Length = 435
Score = 61.9 bits (31), Expect = 6e-008
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||| ||||||||||||||||||| |||||||||||||
Sbjct: 259 cacacggactacatctacacccaggagaagcacaactag 297
>gb|CD911453.1|CD911453 G550.111C16F010521 G550 Triticum aestivum cDNA clone G550111C16,
mRNA sequence
Length = 346
Score = 61.9 bits (31), Expect = 6e-008
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||| ||||||||||||||||||| |||||||||||||
Sbjct: 115 cacacggactacatctacacccaggagaagcacaactag 153
>gb|CV065703.1|CV065703 WNEL25f4 Wheat EST endosperm library Triticum aestivum cDNA clone
WNEL25f4 5' similar to TPA: Triticum aestivum putative
phytosulfokine peptide precursor, mRNA sequence
Length = 491
Score = 61.9 bits (31), Expect = 6e-008
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||| ||||||||||||||||||| |||||||||||||
Sbjct: 168 cacacggactacatctacacccaggagaagcacaactag 206
>gb|CV065976.1|CV065976 WNEL29a7 Wheat EST endosperm library Triticum aestivum cDNA clone
WNEL29a7 5' similar to TPA: Triticum aestivum putative
phytosulfokine peptide precursor, mRNA sequence
Length = 427
Score = 61.9 bits (31), Expect = 6e-008
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||| ||||||||||||||||||| |||||||||||||
Sbjct: 166 cacacggactacatctacacccaggagaagcacaactag 204
>emb|AX642424.1| Sequence 80 from Patent WO02083901
Length = 467
Score = 61.9 bits (31), Expect = 6e-008
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||| ||||||||||||||||||| |||||||||||||
Sbjct: 266 cacacggactacatctacacccaggagaagcacaactag 304
>tpg|BK000132.1| TPA: Triticum aestivum putative phytosulfokine peptide precursor
(PSK2) mRNA, complete cds
Length = 467
Score = 61.9 bits (31), Expect = 6e-008
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||| ||||||||||||||||||| |||||||||||||
Sbjct: 266 cacacggactacatctacacccaggagaagcacaactag 304
>gb|AW448437.1|AW448437 BRY_750 BRY Triticum aestivum cDNA clone P5-1C, mRNA sequence
Length = 848
Score = 56.0 bits (28), Expect = 3e-006
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 323 accgactacatctacacccaggggaagcacaactag 358
|||||||||||||| ||||||| |||||||||||||
Sbjct: 288 accgactacatctatacccaggagaagcacaactag 323
>gb|BQ609821.1|BQ609821 BRY_750 wheat EST endosperm library Triticum aestivum cDNA 5', mRNA
sequence
Length = 848
Score = 56.0 bits (28), Expect = 3e-006
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 323 accgactacatctacacccaggggaagcacaactag 358
|||||||||||||| ||||||| |||||||||||||
Sbjct: 288 accgactacatctatacccaggagaagcacaactag 323
>gb|BE399087.1|BE399087 WHE0030.D10F990514 ITEC WHE Wheat Endosperm Library Triticum
aestivum cDNA clone WHE0030.D10, mRNA sequence
Length = 414
Score = 54.0 bits (27), Expect = 1e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccaggggaagcacaactag 358
||||| ||||||||||||||||||| ||| |||||||||
Sbjct: 242 cacacggactacatctacacccaggagaatcacaactag 280
>gb|CA710973.1|CA710973 wdk2c.pk019.i5 wdk2c Triticum aestivum cDNA clone wdk2c.pk019.i5 5'
end, mRNA sequence
Length = 340
Score = 44.1 bits (22), Expect = 0.013
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacccagg 344
|||||||||||| ||||||||||||
Sbjct: 265 cacaccgactacntctacacccagg 289
>gb|CA595038.1|CA595038 wpa1c.pk008.l13 wpa1c Triticum aestivum cDNA clone wpa1c.pk008.l13
5' end, mRNA sequence
Length = 522
Score = 42.1 bits (21), Expect = 0.052
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 320 cacaccgactacatctacacc 340
|||||||||||||||||||||
Sbjct: 280 cacaccgactacatctacacc 300
>gb|CA710903.1|CA710903 wdk2c.pk018.b22 wdk2c Triticum aestivum cDNA clone wdk2c.pk018.b22
5' end, mRNA sequence
Length = 480
Score = 42.1 bits (21), Expect = 0.052
Identities = 50/57 (87%), Gaps = 2/57 (3%)
Strand = Plus / Plus
Query: 291 agtgcctgatgaggaggacgttgc-tcgctcacaccg-actacatctacacccaggg 345
||||| |||||||||||||| || | || ||||||| |||||||||||||||||||
Sbjct: 330 agtgcttgatgaggaggacgctgggtggcgcacaccggactacatctacacccaggg 386
>gb|CA633511.1|CA633511 wle1n.pk0072.h9 wle1n Triticum aestivum cDNA clone wle1n.pk0072.h9
5' end, mRNA sequence
Length = 480
Score = 40.1 bits (20), Expect = 0.21
Identities = 35/39 (89%), Gaps = 2/39 (5%)
Strand = Plus / Plus
Query: 326 gactacatctacacccagg--ggaagcacaactagctag 362
||||||||||||||| ||| |||| |||||||||||||
Sbjct: 361 gactacatctacaccaagggaggaaacacaactagctag 399
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 169,580
Number of Sequences: 636343
Number of extensions: 169580
Number of successful extensions: 50003
Number of sequences better than 0.5: 42
Number of HSP's better than 0.5 without gapping: 41
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 49949
Number of HSP's gapped (non-prelim): 53
length of query: 724
length of database: 367,240,239
effective HSP length: 19
effective length of query: 705
effective length of database: 355,149,722
effective search space: 250380554010
effective search space used: 250380554010
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)