BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3311938.2.2
(860 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ259963.1|BJ259963 BJ259963 Y. Ogihara unpublished cDNA... 60 3e-007
gb|BJ265678.1|BJ265678 BJ265678 Y. Ogihara unpublished cDNA... 60 3e-007
gb|AY533102.1| Triticum aestivum beta-expansin 2 (EXPB2) mR... 60 3e-007
gb|AY533104.1| Triticum aestivum beta-expansin 2 (EXPB2) ge... 60 3e-007
gb|CA596964.1|CA596964 wpa1c.pk013.p2 wpa1c Triticum aestiv... 56 4e-006
gb|CA741453.1|CA741453 wia1c.pk002.p10 wia1c Triticum aesti... 56 4e-006
gb|AY533101.1| Triticum aestivum beta-expansin 1 (EXPB1) mR... 56 4e-006
gb|AY533103.1| Triticum aestivum beta-expansin 1 (EXPB1) ge... 56 4e-006
gb|BQ902195.1|BQ902195 Ta02_05g04_R Ta02_AAFC_ECORC_Fusariu... 54 2e-005
gb|BJ263981.1|BJ263981 BJ263981 Y. Ogihara unpublished cDNA... 54 2e-005
gb|BJ265184.1|BJ265184 BJ265184 Y. Ogihara unpublished cDNA... 54 2e-005
gb|BJ254736.1|BJ254736 BJ254736 Y. Ogihara unpublished cDNA... 52 6e-005
gb|BJ255012.1|BJ255012 BJ255012 Y. Ogihara unpublished cDNA... 52 6e-005
gb|BJ263242.1|BJ263242 BJ263242 Y. Ogihara unpublished cDNA... 52 6e-005
gb|BJ266155.1|BJ266155 BJ266155 Y. Ogihara unpublished cDNA... 52 6e-005
gb|BJ266235.1|BJ266235 BJ266235 Y. Ogihara unpublished cDNA... 52 6e-005
gb|AY533100.1| Triticum aestivum beta-expansin 1 (EXPB1) mR... 52 6e-005
gb|AY543539.1| Triticum aestivum expansin EXPB4 mRNA, compl... 52 6e-005
gb|BQ901309.1|BQ901309 Ta02_20g06_R Ta02_AAFC_ECORC_Fusariu... 50 3e-004
gb|BE498763.1|BE498763 WHE0965_B09_D17ZS Wheat pre-anthesis... 48 0.001
gb|CA741473.1|CA741473 wia1c.pk002.l24 wia1c Triticum aesti... 48 0.001
gb|CA741930.1|CA741930 wia1c.pk002.e9 wia1c Triticum aestiv... 48 0.001
gb|CD877922.1|CD877922 AZO4.101H13F011002 AZO4 Triticum aes... 48 0.001
gb|CD933822.1|CD933822 GR45.122B21F010721 GR45 Triticum aes... 48 0.001
gb|AY543540.1| Triticum aestivum expansin EXPB5 mRNA, compl... 48 0.001
gb|BJ299385.1|BJ299385 BJ299385 Y. Ogihara unpublished cDNA... 46 0.004
gb|BJ299585.1|BJ299585 BJ299585 Y. Ogihara unpublished cDNA... 46 0.004
gb|BQ902446.1|BQ902446 Ta02_02d06_R Ta02_AAFC_ECORC_Fusariu... 46 0.004
gb|BJ246972.1|BJ246972 BJ246972 Y. Ogihara unpublished cDNA... 46 0.004
gb|BJ252196.1|BJ252196 BJ252196 Y. Ogihara unpublished cDNA... 46 0.004
gb|BJ252946.1|BJ252946 BJ252946 Y. Ogihara unpublished cDNA... 46 0.004
gb|BJ254831.1|BJ254831 BJ254831 Y. Ogihara unpublished cDNA... 46 0.004
gb|BJ255278.1|BJ255278 BJ255278 Y. Ogihara unpublished cDNA... 46 0.004
gb|BQ167140.1|BQ167140 WHE0058_A04_B08ZK Cheyenne wheat end... 46 0.004
gb|CD373981.1|CD373981 WHE2620_B04_D08ZT Sumai3 Wheat Fusar... 46 0.004
gb|CD871909.1|CD871909 AZO2.119F19R010403 AZO2 Triticum aes... 46 0.004
gb|CD903894.1|CD903894 G356.111M15R011024 G356 Triticum aes... 46 0.004
gb|BF482294.1|BF482294 WHE1797_A09_B17ZS Wheat pre-anthesis... 40 0.25
gb|BJ236789.1|BJ236789 BJ236789 Y. Ogihara unpublished cDNA... 40 0.25
gb|BJ237654.1|BJ237654 BJ237654 Y. Ogihara unpublished cDNA... 40 0.25
gb|BJ240324.1|BJ240324 BJ240324 Y. Ogihara unpublished cDNA... 40 0.25
gb|BJ240582.1|BJ240582 BJ240582 Y. Ogihara unpublished cDNA... 40 0.25
gb|BJ242327.1|BJ242327 BJ242327 Y. Ogihara unpublished cDNA... 40 0.25
gb|BQ243462.1|BQ243462 TaE15014F07F TaE15 Triticum aestivum... 40 0.25
gb|BQ806609.1|BQ806609 WHE3581_A09_B17ZS Wheat developing g... 40 0.25
gb|BJ249496.1|BJ249496 BJ249496 Y. Ogihara unpublished cDNA... 40 0.25
gb|CD871908.1|CD871908 AZO2.119F19F010207 AZO2 Triticum aes... 40 0.25
gb|CD885359.1|CD885359 G118.001D22R010921 G118 Triticum aes... 40 0.25
gb|CD893800.1|CD893800 G118.124J02R011116 G118 Triticum aes... 40 0.25
gb|CD897610.1|CD897610 G174.106I03R011120 G174 Triticum aes... 40 0.25
gb|CD900159.1|CD900159 G174.114K12R011120 G174 Triticum aes... 40 0.25
gb|CD914851.1|CD914851 G550.124E07F010712 G550 Triticum aes... 40 0.25
gb|CD930223.1|CD930223 GR45.110K17F010418 GR45 Triticum aes... 40 0.25
gb|CK207985.1|CK207985 FGAS019660 Triticum aestivum FGAS: L... 40 0.25
>gb|BJ259963.1|BJ259963 BJ259963 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh22p01 5', mRNA sequence
Length = 635
Score = 60.0 bits (30), Expect = 3e-007
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 232 tcaccttccacttggagaaggggtgcaaccccaactacctggccctgttggtcaagtacg 291
||||||||||| | |||||||| | ||||||||||||||||||| || | ||||||| ||
Sbjct: 531 tcaccttccacgtcgagaagggctccaaccccaactacctggccgtgctcgtcaagttcg 590
Query: 292 tc 293
||
Sbjct: 591 tc 592
Score = 48.1 bits (24), Expect = 0.001
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 78 gacatgaactacgagcccattgcggcataccacttcgacctagcgggcacggcgttcggt 137
|||| ||||||||||||||| ||| | |||||| ||||||| | |||| ||| |||||
Sbjct: 371 gacaagaactacgagcccatcgcgccgtaccacatcgacctctccggcaaggccttcggc 430
Query: 138 gccatggc 145
||||||||
Sbjct: 431 gccatggc 438
>gb|BJ265678.1|BJ265678 BJ265678 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh22p01 3', mRNA sequence
Length = 685
Score = 60.0 bits (30), Expect = 3e-007
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 232 tcaccttccacttggagaaggggtgcaaccccaactacctggccctgttggtcaagtacg 291
||||||||||| | |||||||| | ||||||||||||||||||| || | ||||||| ||
Sbjct: 494 tcaccttccacgtcgagaagggctccaaccccaactacctggccgtgctcgtcaagttcg 435
Query: 292 tc 293
||
Sbjct: 434 tc 433
Score = 48.1 bits (24), Expect = 0.001
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 78 gacatgaactacgagcccattgcggcataccacttcgacctagcgggcacggcgttcggt 137
|||| ||||||||||||||| ||| | |||||| ||||||| | |||| ||| |||||
Sbjct: 654 gacaagaactacgagcccatcgcgccgtaccacatcgacctctccggcaaggccttcggc 595
Query: 138 gccatggc 145
||||||||
Sbjct: 594 gccatggc 587
Score = 46.1 bits (23), Expect = 0.004
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 369 tggggcgccatctggaggaaggacagcgacaagccgatcaagg 411
|||||||||||||||||| |||| ||| ||||||| ||||||
Sbjct: 357 tggggcgccatctggaggtgggacggcgccaagccgctcaagg 315
>gb|AY533102.1| Triticum aestivum beta-expansin 2 (EXPB2) mRNA, complete cds
Length = 1068
Score = 60.0 bits (30), Expect = 3e-007
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 232 tcaccttccacttggagaaggggtgcaaccccaactacctggccctgttggtcaagtacg 291
||||||||||| | |||||||| | ||||||||||||||||||| || | ||||||| ||
Sbjct: 529 tcaccttccacgtcgagaagggctccaaccccaactacctggccgtgctcgtcaagttcg 588
Query: 292 tc 293
||
Sbjct: 589 tc 590
Score = 48.1 bits (24), Expect = 0.001
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 78 gacatgaactacgagcccattgcggcataccacttcgacctagcgggcacggcgttcggt 137
|||| ||||||||||||||| ||| | |||||| ||||||| | |||| ||| |||||
Sbjct: 369 gacaagaactacgagcccatcgcgccgtaccacatcgacctctccggcaaggccttcggc 428
Query: 138 gccatggc 145
||||||||
Sbjct: 429 gccatggc 436
Score = 46.1 bits (23), Expect = 0.004
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 369 tggggcgccatctggaggaaggacagcgacaagccgatcaagg 411
|||||||||||||||||| |||| ||| ||||||| ||||||
Sbjct: 666 tggggcgccatctggaggtgggacggcgccaagccgctcaagg 708
>gb|AY533104.1| Triticum aestivum beta-expansin 2 (EXPB2) gene, complete cds
Length = 1216
Score = 60.0 bits (30), Expect = 3e-007
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 232 tcaccttccacttggagaaggggtgcaaccccaactacctggccctgttggtcaagtacg 291
||||||||||| | |||||||| | ||||||||||||||||||| || | ||||||| ||
Sbjct: 764 tcaccttccacgtcgagaagggctccaaccccaactacctggccgtgctcgtcaagttcg 823
Query: 292 tc 293
||
Sbjct: 824 tc 825
Score = 46.1 bits (23), Expect = 0.004
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 369 tggggcgccatctggaggaaggacagcgacaagccgatcaagg 411
|||||||||||||||||| |||| ||| ||||||| ||||||
Sbjct: 901 tggggcgccatctggaggtgggacggcgccaagccgctcaagg 943
Score = 42.1 bits (21), Expect = 0.062
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 78 gacatgaactacgagcccattgcggcataccacttcgacct 118
|||| ||||||||||||||| ||| | |||||| |||||||
Sbjct: 543 gacaagaactacgagcccatcgcgccgtaccacatcgacct 583
>gb|CA596964.1|CA596964 wpa1c.pk013.p2 wpa1c Triticum aestivum cDNA clone wpa1c.pk013.p2 5'
end, mRNA sequence
Length = 609
Score = 56.0 bits (28), Expect = 4e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 78 gacatgaactacgagcccattgcggcataccacttcgacctagcgggcacggcgttcggt 137
|||| ||||||||||||||| ||| | |||||| ||||||| | |||||||| |||||
Sbjct: 387 gacaagaactacgagcccatcgcgccgtaccacatcgacctctccggcacggccttcggc 446
Query: 138 gccatggc 145
||||||||
Sbjct: 447 gccatggc 454
>gb|CA741453.1|CA741453 wia1c.pk002.p10 wia1c Triticum aestivum cDNA clone wia1c.pk002.p10
5' end, mRNA sequence
Length = 644
Score = 56.0 bits (28), Expect = 4e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 78 gacatgaactacgagcccattgcggcataccacttcgacctagcgggcacggcgttcggt 137
|||| ||||||||||||||| ||| | |||||| ||||||| | |||||||| |||||
Sbjct: 377 gacaagaactacgagcccatcgcgccgtaccacatcgacctctccggcacggccttcggc 436
Query: 138 gccatggc 145
||||||||
Sbjct: 437 gccatggc 444
>gb|AY533101.1| Triticum aestivum beta-expansin 1 (EXPB1) mRNA, complete cds
Length = 1111
Score = 56.0 bits (28), Expect = 4e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 78 gacatgaactacgagcccattgcggcataccacttcgacctagcgggcacggcgttcggt 137
|||| ||||||||||||||| ||| | |||||| ||||||| | |||||||| |||||
Sbjct: 399 gacaagaactacgagcccatcgcgccgtaccacatcgacctctccggcacggccttcggc 458
Query: 138 gccatggc 145
||||||||
Sbjct: 459 gccatggc 466
Score = 52.0 bits (26), Expect = 6e-005
Identities = 83/102 (81%)
Strand = Plus / Plus
Query: 232 tcaccttccacttggagaaggggtgcaaccccaactacctggccctgttggtcaagtacg 291
|||||||||| | |||||||| | ||||||||||||||||||| || | || |||| ||
Sbjct: 559 tcaccttccatgtcgagaagggctccaaccccaactacctggccgtgctcgttaagttcg 618
Query: 292 tcgacggcgatggcgacattgtggcggtggacatcaaggaga 333
|| || |||||||||| | ||| | |||||||| ||||||
Sbjct: 619 tctccgacgatggcgacgtcgtgcagatggacatccaggaga 660
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 369 tggggcgccatctggaggaaggacagcgacaagccgatcaaggg 412
|||||||||||||||||| |||| ||| ||||||| |||||||
Sbjct: 696 tggggcgccatctggaggtgggacggcgccaagccgctcaaggg 739
>gb|AY533103.1| Triticum aestivum beta-expansin 1 (EXPB1) gene, complete cds
Length = 1149
Score = 56.0 bits (28), Expect = 4e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 78 gacatgaactacgagcccattgcggcataccacttcgacctagcgggcacggcgttcggt 137
|||| ||||||||||||||| ||| | |||||| ||||||| | |||||||| |||||
Sbjct: 683 gacaagaactacgagcccatcgcgccgtaccacatcgacctctccggcacggccttcggc 742
Query: 138 gccatggc 145
||||||||
Sbjct: 743 gccatggc 750
Score = 52.0 bits (26), Expect = 6e-005
Identities = 83/102 (81%)
Strand = Plus / Plus
Query: 232 tcaccttccacttggagaaggggtgcaaccccaactacctggccctgttggtcaagtacg 291
|||||||||| | |||||||| | ||||||||||||||||||| || | || |||| ||
Sbjct: 843 tcaccttccatgtcgagaagggctccaaccccaactacctggccgtgctcgttaagttcg 902
Query: 292 tcgacggcgatggcgacattgtggcggtggacatcaaggaga 333
|| || |||||||||| | ||| | |||||||| ||||||
Sbjct: 903 tctccgacgatggcgacgtcgtgcagatggacatccaggaga 944
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 369 tggggcgccatctggaggaaggacagcgacaagccgatcaaggg 412
|||||||||||||||||| |||| ||| ||||||| |||||||
Sbjct: 980 tggggcgccatctggaggtgggacggcgccaagccgctcaaggg 1023
>gb|BQ902195.1|BQ902195 Ta02_05g04_R
Ta02_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta02_05g04, mRNA
sequence
Length = 306
Score = 54.0 bits (27), Expect = 2e-005
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 264 aactacctggccctgttggtcaagtacgtcgacggcgatggcgacattgtggcggtggac 323
||||||||||||||| || |||||| | || | ||||| |||||| | |||| ||||||
Sbjct: 256 aactacctggccctggtgatcaagttcctccaaggcgacggcgacgtggtgggcgtggac 197
Query: 324 atcaaggagaagggc 338
|||||| ||||||||
Sbjct: 196 atcaagcagaagggc 182
Score = 40.1 bits (20), Expect = 0.25
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 431 caccaccgagggaggcactaagaccgtc 458
|||||||||||| ||||| |||||||||
Sbjct: 89 caccaccgagggcggcaccaagaccgtc 62
>gb|BJ263981.1|BJ263981 BJ263981 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh7f09 3', mRNA sequence
Length = 588
Score = 54.0 bits (27), Expect = 2e-005
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 264 aactacctggccctgttggtcaagtacgtcgacggcgatggcgacattgtggcggtggac 323
||||||||||||||| || |||||| | || | ||||| |||||| | |||| ||||||
Sbjct: 372 aactacctggccctggtgatcaagttcctccaaggcgacggcgacgtggtgggcgtggac 313
Query: 324 atcaaggagaagggc 338
|||||| ||||||||
Sbjct: 312 atcaagcagaagggc 298
Score = 40.1 bits (20), Expect = 0.25
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 431 caccaccgagggaggcactaagaccgtc 458
|||||||||||| ||||| |||||||||
Sbjct: 205 caccaccgagggcggcaccaagaccgtc 178
>gb|BJ265184.1|BJ265184 BJ265184 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh21a10 3', mRNA sequence
Length = 620
Score = 54.0 bits (27), Expect = 2e-005
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 264 aactacctggccctgttggtcaagtacgtcgacggcgatggcgacattgtggcggtggac 323
||||||||||||||| || |||||| | || | ||||| |||||| | |||| ||||||
Sbjct: 469 aactacctggccctggtgatcaagttcctccaaggcgacggcgacgtggtgggcgtggac 410
Query: 324 atcaaggagaagggc 338
|||||| ||||||||
Sbjct: 409 atcaagcagaagggc 395
Score = 40.1 bits (20), Expect = 0.25
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 431 caccaccgagggaggcactaagaccgtc 458
|||||||||||| ||||| |||||||||
Sbjct: 302 caccaccgagggcggcaccaagaccgtc 275
>gb|BJ254736.1|BJ254736 BJ254736 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf6n16 3', mRNA sequence
Length = 715
Score = 52.0 bits (26), Expect = 6e-005
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 431 caccaccgagggaggcactaagaccgtctatgacgatgtcatccccgccggctggaagcc 490
|||||||||||| ||||| ||||||||| ||||| ||||||||| |||||||||||
Sbjct: 306 caccaccgagggcggcaccaagaccgtcgtcgacgacgtcatccccaagggctggaagcc 247
Query: 491 caacac 496
| ||||
Sbjct: 246 cgacac 241
Score = 46.1 bits (23), Expect = 0.004
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 264 aactacctggccctgttggtcaagtacgtcgacggcgatggcgacattgtggcggtggac 323
||||||||||| ||| || |||||| | || | ||||| |||||| | |||| ||||||
Sbjct: 473 aactacctggcactggtgatcaagttcctccaaggcgacggcgacgtggtgggcgtggac 414
Query: 324 atcaaggagaagggc 338
|||||| ||||||||
Sbjct: 413 atcaagcagaagggc 399
>gb|BJ255012.1|BJ255012 BJ255012 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf7n16 3', mRNA sequence
Length = 538
Score = 52.0 bits (26), Expect = 6e-005
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 431 caccaccgagggaggcactaagaccgtctatgacgatgtcatccccgccggctggaagcc 490
|||||||||||| ||||| ||||||||| ||||| ||||||||| |||||||||||
Sbjct: 224 caccaccgagggcggcaccaagaccgtcgtcgacgacgtcatccccaagggctggaagcc 165
Query: 491 caacac 496
| ||||
Sbjct: 164 cgacac 159
Score = 46.1 bits (23), Expect = 0.004
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 264 aactacctggccctgttggtcaagtacgtcgacggcgatggcgacattgtggcggtggac 323
||||||||||| ||| || |||||| | || | ||||| |||||| | |||| ||||||
Sbjct: 391 aactacctggcactggtgatcaagttcctccaaggcgacggcgacgtggtgggcgtggac 332
Query: 324 atcaaggagaagggc 338
|||||| ||||||||
Sbjct: 331 atcaagcagaagggc 317
>gb|BJ263242.1|BJ263242 BJ263242 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh13j20 3', mRNA sequence
Length = 709
Score = 52.0 bits (26), Expect = 6e-005
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 431 caccaccgagggaggcactaagaccgtctatgacgatgtcatccccgccggctggaagcc 490
|||||||||||| ||||| ||||||||| ||||| ||||||||| |||||||||||
Sbjct: 317 caccaccgagggcggcaccaagaccgtcgtcgacgacgtcatccccaagggctggaagcc 258
Query: 491 caacac 496
| ||||
Sbjct: 257 cgacac 252
Score = 46.1 bits (23), Expect = 0.004
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 264 aactacctggccctgttggtcaagtacgtcgacggcgatggcgacattgtggcggtggac 323
||||||||||| ||| || |||||| | || | ||||| |||||| | |||| ||||||
Sbjct: 484 aactacctggcactggtgatcaagttcctccaaggcgacggcgacgtggtgggcgtggac 425
Query: 324 atcaaggagaagggc 338
|||||| ||||||||
Sbjct: 424 atcaagcagaagggc 410
>gb|BJ266155.1|BJ266155 BJ266155 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh25b04 3', mRNA sequence
Length = 586
Score = 52.0 bits (26), Expect = 6e-005
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 431 caccaccgagggaggcactaagaccgtctatgacgatgtcatccccgccggctggaagcc 490
|||||||||||| ||||| ||||||||| ||||| ||||||||| |||||||||||
Sbjct: 216 caccaccgagggcggcaccaagaccgtcgtcgacgacgtcatccccaagggctggaagcc 157
Query: 491 caacac 496
| ||||
Sbjct: 156 cgacac 151
Score = 46.1 bits (23), Expect = 0.004
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 264 aactacctggccctgttggtcaagtacgtcgacggcgatggcgacattgtggcggtggac 323
||||||||||| ||| || |||||| | || | ||||| |||||| | |||| ||||||
Sbjct: 383 aactacctggcactggtgatcaagttcctccaaggcgacggcgacgtggtgggcgtggac 324
Query: 324 atcaaggagaagggc 338
|||||| ||||||||
Sbjct: 323 atcaagcagaagggc 309
>gb|BJ266235.1|BJ266235 BJ266235 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh25i24 3', mRNA sequence
Length = 613
Score = 52.0 bits (26), Expect = 6e-005
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 431 caccaccgagggaggcactaagaccgtctatgacgatgtcatccccgccggctggaagcc 490
|||||||||||| ||||| ||||||||| ||||| ||||||||| |||||||||||
Sbjct: 236 caccaccgagggcggcaccaagaccgtcgtcgacgacgtcatccccaagggctggaagcc 177
Query: 491 caacac 496
| ||||
Sbjct: 176 cgacac 171
Score = 46.1 bits (23), Expect = 0.004
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 264 aactacctggccctgttggtcaagtacgtcgacggcgatggcgacattgtggcggtggac 323
||||||||||| ||| || |||||| | || | ||||| |||||| | |||| ||||||
Sbjct: 403 aactacctggcactggtgatcaagttcctccaaggcgacggcgacgtggtgggcgtggac 344
Query: 324 atcaaggagaagggc 338
|||||| ||||||||
Sbjct: 343 atcaagcagaagggc 329
>gb|AY533100.1| Triticum aestivum beta-expansin 1 (EXPB1) mRNA, partial cds
Length = 496
Score = 52.0 bits (26), Expect = 6e-005
Identities = 83/102 (81%)
Strand = Plus / Plus
Query: 232 tcaccttccacttggagaaggggtgcaaccccaactacctggccctgttggtcaagtacg 291
|||||||||| | |||||||| | ||||||||||||||||||| || | || |||| ||
Sbjct: 19 tcaccttccatgtcgagaagggctccaaccccaactacctggccgtgctcgttaagttcg 78
Query: 292 tcgacggcgatggcgacattgtggcggtggacatcaaggaga 333
|| || |||||||||| | ||| | |||||||| ||||||
Sbjct: 79 tctccgacgatggcgacgtcgtgcagatggacatccaggaga 120
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 369 tggggcgccatctggaggaaggacagcgacaagccgatcaaggg 412
|||||||||||||||||| |||| ||| ||||||| |||||||
Sbjct: 156 tggggcgccatctggaggtgggacggcgccaagccgctcaaggg 199
>gb|AY543539.1| Triticum aestivum expansin EXPB4 mRNA, complete cds
Length = 825
Score = 52.0 bits (26), Expect = 6e-005
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 431 caccaccgagggaggcactaagaccgtctatgacgatgtcatccccgccggctggaagcc 490
|||||||||||| ||||| ||||||||| ||||| ||||||||| |||||||||||
Sbjct: 721 caccaccgagggcggcaccaagaccgtcgtcgacgacgtcatccccaagggctggaagcc 780
Query: 491 caacac 496
| ||||
Sbjct: 781 cgacac 786
Score = 46.1 bits (23), Expect = 0.004
Identities = 62/75 (82%)
Strand = Plus / Plus
Query: 264 aactacctggccctgttggtcaagtacgtcgacggcgatggcgacattgtggcggtggac 323
||||||||||| ||| || |||||| | || | ||||| |||||| | |||| ||||||
Sbjct: 554 aactacctggcactggtgatcaagttcctccaaggcgacggcgacgtggtgggcgtggac 613
Query: 324 atcaaggagaagggc 338
|||||| ||||||||
Sbjct: 614 atcaagcagaagggc 628
>gb|BQ901309.1|BQ901309 Ta02_20g06_R
Ta02_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta02_20g06, mRNA
sequence
Length = 313
Score = 50.1 bits (25), Expect = 3e-004
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 264 aactacctggccctgttggtcaagtacgtcgacggcgatggcgacattgtggcggtggac 323
|| |||||||||||| || |||||| | || | ||||| |||||| | |||| ||||||
Sbjct: 255 aaytacctggccctggtgatcaagttcctccaaggcgacggcgacgtggtgggcgtggac 196
Query: 324 atcaaggagaagggc 338
|||||| ||||||||
Sbjct: 195 atcaagcagaagggc 181
>gb|BE498763.1|BE498763 WHE0965_B09_D17ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0965_B09_D17, mRNA sequence
Length = 385
Score = 48.1 bits (24), Expect = 0.001
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 468 gtcatccccgccggctggaagccc 491
||||||||||||||||||||||||
Sbjct: 82 gtcatccccgccggctggaagccc 105
>gb|CA741473.1|CA741473 wia1c.pk002.l24 wia1c Triticum aestivum cDNA clone wia1c.pk002.l24
5' end, mRNA sequence
Length = 555
Score = 48.1 bits (24), Expect = 0.001
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 78 gacatgaactacgagcccattgcggcataccacttcgacctagcgggcacggcgttcggt 137
|||| ||||||||||||||| ||| | |||||| ||||||| | |||| ||| |||||
Sbjct: 395 gacaagaactacgagcccatcgcgccgtaccacatcgacctctccggcaaggccttcggc 454
Query: 138 gccatggc 145
||||||||
Sbjct: 455 gccatggc 462
>gb|CA741930.1|CA741930 wia1c.pk002.e9 wia1c Triticum aestivum cDNA clone wia1c.pk002.e9 5'
end, mRNA sequence
Length = 618
Score = 48.1 bits (24), Expect = 0.001
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 78 gacatgaactacgagcccattgcggcataccacttcgacctagcgggcacggcgttcggt 137
|||| ||||||||||||||| ||| | |||||| ||||||| | |||| ||| |||||
Sbjct: 454 gacaagaactacgagcccatcgcgccgtaccacatcgacctctccggcaaggccttcggc 513
Query: 138 gccatggc 145
||||||||
Sbjct: 514 gccatggc 521
>gb|CD877922.1|CD877922 AZO4.101H13F011002 AZO4 Triticum aestivum cDNA clone AZO4101H13,
mRNA sequence
Length = 700
Score = 48.1 bits (24), Expect = 0.001
Identities = 44/48 (91%), Gaps = 2/48 (4%)
Strand = Plus / Plus
Query: 105 taccacttcgacct-agcgggcacggcgttcggtgccatggctaagaa 151
|||||||||||||| ||||| |||||||||||| |||||||| |||||
Sbjct: 417 taccacttcgacctcagcgg-cacggcgttcggggccatggccaagaa 463
>gb|CD933822.1|CD933822 GR45.122B21F010721 GR45 Triticum aestivum cDNA clone GR45122B21,
mRNA sequence
Length = 445
Score = 48.1 bits (24), Expect = 0.001
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 468 gtcatccccgccggctggaagccc 491
||||||||||||||||||||||||
Sbjct: 95 gtcatccccgccggctggaagccc 118
>gb|AY543540.1| Triticum aestivum expansin EXPB5 mRNA, complete cds
Length = 960
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 369 tggggcgccatctggaggaaggacagcgacaagccgatcaaggg 412
|||||||||||||||||| |||| ||| ||||||| |||||||
Sbjct: 649 tggggcgccatctggaggtgggacggcgccaagccgctcaaggg 692
Score = 48.1 bits (24), Expect = 0.001
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 78 gacatgaactacgagcccattgcggcataccacttcgacctagcgggcacggcgttcggt 137
|||| ||||||||||||||| ||| | |||||| ||| ||| | |||||||| |||||
Sbjct: 352 gacaagaactacgagcccatcgcgccgtaccacatcggcctctccggcacggccttcggc 411
Query: 138 gccatggc 145
||||||||
Sbjct: 412 gccatggc 419
Score = 44.1 bits (22), Expect = 0.016
Identities = 82/102 (80%)
Strand = Plus / Plus
Query: 232 tcaccttccacttggagaaggggtgcaaccccaactacctggccctgttggtcaagtacg 291
|||||||||| | ||||| || | ||||||||||||||||||| || | || |||| ||
Sbjct: 512 tcaccttccatgtcgagaaaggctccaaccccaactacctggccgtgctcgttaagttcg 571
Query: 292 tcgacggcgatggcgacattgtggcggtggacatcaaggaga 333
|| || |||||||||| | ||| | |||||||| ||||||
Sbjct: 572 tctccgacgatggcgacgtcgtgcagatggacatccaggaga 613
>gb|BJ299385.1|BJ299385 BJ299385 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl30b20 3', mRNA sequence
Length = 643
Score = 46.1 bits (23), Expect = 0.004
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 468 gtcatccccgccggctggaagcc 490
|||||||||||||||||||||||
Sbjct: 226 gtcatccccgccggctggaagcc 204
>gb|BJ299585.1|BJ299585 BJ299585 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl31b20 3', mRNA sequence
Length = 480
Score = 46.1 bits (23), Expect = 0.004
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 468 gtcatccccgccggctggaagcc 490
|||||||||||||||||||||||
Sbjct: 224 gtcatccccgccggctggaagcc 202
>gb|BQ902446.1|BQ902446 Ta02_02d06_R
Ta02_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta02_02d06, mRNA
sequence
Length = 307
Score = 46.1 bits (23), Expect = 0.004
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 264 aactacctggccctgttggtcaagtacgtcgacggcgatggcgacattgtggcggtggac 323
||||||||||||||| || |||||| | || | ||||| |||||| | |||| || |||
Sbjct: 257 aactacctggccctggtgatcaagttcctccaaggcgacggcgacgtggtgggcgtagac 198
Query: 324 atcaaggagaagggc 338
|||||| ||||||||
Sbjct: 197 atcaagcagaagggc 183
Score = 40.1 bits (20), Expect = 0.25
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 431 caccaccgagggaggcactaagaccgtc 458
|||||||||||| ||||| |||||||||
Sbjct: 90 caccaccgagggcggcaccaagaccgtc 63
>gb|BJ246972.1|BJ246972 BJ246972 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf26k07 5', mRNA sequence
Length = 668
Score = 46.1 bits (23), Expect = 0.004
Identities = 62/75 (82%)
Strand = Plus / Plus
Query: 264 aactacctggccctgttggtcaagtacgtcgacggcgatggcgacattgtggcggtggac 323
||||||||||| ||| || |||||| | || | ||||| |||||| | |||| ||||||
Sbjct: 242 aactacctggcgctggtgatcaagttcctccaaggcgacggcgacgtggtgggcgtggac 301
Query: 324 atcaaggagaagggc 338
|||||| ||||||||
Sbjct: 302 atcaagcagaagggc 316
>gb|BJ252196.1|BJ252196 BJ252196 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf22c24 3', mRNA sequence
Length = 607
Score = 46.1 bits (23), Expect = 0.004
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 264 aactacctggccctgttggtcaagtacgtcgacggcgatggcgacattgtggcggtggac 323
||||||||||| ||| || |||||| | || | ||||| |||||| | |||| ||||||
Sbjct: 479 aactacctggcgctggtgatcaagttcctccaaggcgacggcgacgtggtgggcgtggac 420
Query: 324 atcaaggagaagggc 338
|||||| ||||||||
Sbjct: 419 atcaagcagaagggc 405
>gb|BJ252946.1|BJ252946 BJ252946 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf26k07 3', mRNA sequence
Length = 577
Score = 46.1 bits (23), Expect = 0.004
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 264 aactacctggccctgttggtcaagtacgtcgacggcgatggcgacattgtggcggtggac 323
||||||||||| ||| || |||||| | || | ||||| |||||| | |||| ||||||
Sbjct: 497 aactacctggcgctggtgatcaagttcctccaaggcgacggcgacgtggtgggcgtggac 438
Query: 324 atcaaggagaagggc 338
|||||| ||||||||
Sbjct: 437 atcaagcagaagggc 423
>gb|BJ254831.1|BJ254831 BJ254831 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf7c24 3', mRNA sequence
Length = 658
Score = 46.1 bits (23), Expect = 0.004
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 264 aactacctggccctgttggtcaagtacgtcgacggcgatggcgacattgtggcggtggac 323
||||||||||||||| || |||||| | || | ||||| |||||| | |||| || |||
Sbjct: 576 aactacctggccctggtgatcaagttcctccaaggcgacggcgacgtggtgggcgtagac 517
Query: 324 atcaaggagaagggc 338
|||||| ||||||||
Sbjct: 516 atcaagcagaagggc 502
Score = 40.1 bits (20), Expect = 0.25
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 431 caccaccgagggaggcactaagaccgtc 458
|||||||||||| ||||| |||||||||
Sbjct: 409 caccaccgagggcggcaccaagaccgtc 382
>gb|BJ255278.1|BJ255278 BJ255278 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf23b02 3', mRNA sequence
Length = 522
Score = 46.1 bits (23), Expect = 0.004
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 264 aactacctggccctgttggtcaagtacgtcgacggcgatggcgacattgtggcggtggac 323
||||||||||| ||| || |||||| | || | ||||| |||||| | |||| ||||||
Sbjct: 491 aactacctggcgctggtgatcaagttcctccaaggcgacggcgacgtggtgggcgtggac 432
Query: 324 atcaaggagaagggc 338
|||||| ||||||||
Sbjct: 431 atcaagcagaagggc 417
>gb|BQ167140.1|BQ167140 WHE0058_A04_B08ZK Cheyenne wheat endosperm cDNA library Triticum
aestivum cDNA clone WHE0058_A04_B08, mRNA sequence
Length = 625
Score = 46.1 bits (23), Expect = 0.004
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 468 gtcatccccgccggctggaagcc 490
|||||||||||||||||||||||
Sbjct: 341 gtcatccccgccggctggaagcc 319
>gb|CD373981.1|CD373981 WHE2620_B04_D08ZT Sumai3 Wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
WHE2620_B04_D08, mRNA sequence
Length = 625
Score = 46.1 bits (23), Expect = 0.004
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 264 aactacctggccctgttggtcaagtacgtcgacggcgatggcgacattgtggcggtggac 323
||||||||||||||| || |||||| | || | ||||| |||||| | ||| ||||||
Sbjct: 503 aactacctggccctggtgatcaagttcctccaaggcgacggcgacgtgttgggcgtggac 444
Query: 324 atcaaggagaagggc 338
|||||| ||||||||
Sbjct: 443 atcaagcagaagggc 429
Score = 40.1 bits (20), Expect = 0.25
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 431 caccaccgagggaggcactaagaccgtc 458
|||||||||||| ||||| |||||||||
Sbjct: 336 caccaccgagggcggcaccaagaccgtc 309
>gb|CD871909.1|CD871909 AZO2.119F19R010403 AZO2 Triticum aestivum cDNA clone AZO2119F19,
mRNA sequence
Length = 555
Score = 46.1 bits (23), Expect = 0.004
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 236 cttccacttggagaaggggtgcaaccccaactacctggccctgttggtcaagtacgtcg 294
||||||| |||||||||| | | || ||||||||||||| || ||||||||| |||||
Sbjct: 465 cttccacgtggagaagggctcccacgccaactacctggcggtgctggtcaagttcgtcg 407
>gb|CD903894.1|CD903894 G356.111M15R011024 G356 Triticum aestivum cDNA clone G356111M15,
mRNA sequence
Length = 694
Score = 46.1 bits (23), Expect = 0.004
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 468 gtcatccccgccggctggaagcc 490
|||||||||||||||||||||||
Sbjct: 341 gtcatccccgccggctggaagcc 319
>gb|BF482294.1|BF482294 WHE1797_A09_B17ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1797_A09_B17, mRNA sequence
Length = 492
Score = 40.1 bits (20), Expect = 0.25
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 75 acggacatgaactacgagcccattgcggcataccacttcgacct 118
||||||||||||||| | ||| | ||| | ||||||||||||||
Sbjct: 380 acggacatgaactactaccccgtggcgccctaccacttcgacct 423
>gb|BJ236789.1|BJ236789 BJ236789 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe23c04 5', mRNA sequence
Length = 659
Score = 40.1 bits (20), Expect = 0.25
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 468 gtcatccccgccggctggaagccc 491
||||||||| ||||||||||||||
Sbjct: 542 gtcatccccaccggctggaagccc 565
>gb|BJ237654.1|BJ237654 BJ237654 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe10k17 3', mRNA sequence
Length = 714
Score = 40.1 bits (20), Expect = 0.25
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 468 gtcatccccgccggctggaagccc 491
||||||||| ||||||||||||||
Sbjct: 279 gtcatccccaccggctggaagccc 256
>gb|BJ240324.1|BJ240324 BJ240324 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe15e02 3', mRNA sequence
Length = 631
Score = 40.1 bits (20), Expect = 0.25
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 468 gtcatccccgccggctggaagccc 491
||||||||| ||||||||||||||
Sbjct: 262 gtcatccccaccggctggaagccc 239
>gb|BJ240582.1|BJ240582 BJ240582 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe16e02 3', mRNA sequence
Length = 556
Score = 40.1 bits (20), Expect = 0.25
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 468 gtcatccccgccggctggaagccc 491
||||||||| ||||||||||||||
Sbjct: 261 gtcatccccaccggctggaagccc 238
>gb|BJ242327.1|BJ242327 BJ242327 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe23c04 3', mRNA sequence
Length = 669
Score = 40.1 bits (20), Expect = 0.25
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 468 gtcatccccgccggctggaagccc 491
||||||||| ||||||||||||||
Sbjct: 376 gtcatccccaccggctggaagccc 353
>gb|BQ243462.1|BQ243462 TaE15014F07F TaE15 Triticum aestivum cDNA clone TaE15014F07F, mRNA
sequence
Length = 524
Score = 40.1 bits (20), Expect = 0.25
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 287 gtacgtcgacggcgatggcgacat 310
||||| ||||||||||||||||||
Sbjct: 351 gtacggcgacggcgatggcgacat 328
>gb|BQ806609.1|BQ806609 WHE3581_A09_B17ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3581_A09_B17, mRNA sequence
Length = 733
Score = 40.1 bits (20), Expect = 0.25
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 468 gtcatccccgccggctggaagccc 491
||||||||| ||||||||||||||
Sbjct: 447 gtcatccccaccggctggaagccc 470
>gb|BJ249496.1|BJ249496 BJ249496 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf11d01 3', mRNA sequence
Length = 458
Score = 40.1 bits (20), Expect = 0.25
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 431 caccaccgagggaggcactaagaccgtc 458
|||||||||||| ||||| |||||||||
Sbjct: 302 caccaccgagggcggcaccaagaccgtc 275
>gb|CD871908.1|CD871908 AZO2.119F19F010207 AZO2 Triticum aestivum cDNA clone AZO2119F19,
mRNA sequence
Length = 696
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 54 aagcccgtggtggtgtacattacggacatgaactacgagc 93
||||| |||| |||| ||| |||||||||||||||||||
Sbjct: 500 aagccggtgggggtggtcatcacggacatgaactacgagc 539
>gb|CD885359.1|CD885359 G118.001D22R010921 G118 Triticum aestivum cDNA clone G118001D22,
mRNA sequence
Length = 591
Score = 40.1 bits (20), Expect = 0.25
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 468 gtcatccccgccggctggaagcccaaca 495
||||||||||||| |||||||||||||
Sbjct: 258 gtcatccccgccgattggaagcccaaca 231
>gb|CD893800.1|CD893800 G118.124J02R011116 G118 Triticum aestivum cDNA clone G118124J02,
mRNA sequence
Length = 651
Score = 40.1 bits (20), Expect = 0.25
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 468 gtcatccccgccggctggaagccc 491
||||||||| ||||||||||||||
Sbjct: 349 gtcatccccaccggctggaagccc 326
>gb|CD897610.1|CD897610 G174.106I03R011120 G174 Triticum aestivum cDNA clone G174106I03,
mRNA sequence
Length = 757
Score = 40.1 bits (20), Expect = 0.25
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 468 gtcatccccgccggctggaagccc 491
||||||||| ||||||||||||||
Sbjct: 400 gtcatccccaccggctggaagccc 377
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 171,513
Number of Sequences: 636343
Number of extensions: 171513
Number of successful extensions: 48785
Number of sequences better than 0.5: 55
Number of HSP's better than 0.5 without gapping: 54
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 48629
Number of HSP's gapped (non-prelim): 152
length of query: 860
length of database: 367,240,239
effective HSP length: 19
effective length of query: 841
effective length of database: 355,149,722
effective search space: 298680916202
effective search space used: 298680916202
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)