BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3199064.2.1
(589 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD490841.1|CD490841 WHE3006_G01_M02ZT Wheat etiolated se... 220 8e-056
gb|BJ271866.1|BJ271866 BJ271866 Y. Ogihara unpublished cDNA... 202 2e-050
gb|CV781899.1|CV781899 FGAS076312 Triticum aestivum FGAS: L... 202 2e-050
gb|CA612691.1|CA612691 wr1.pk0138.g9 wr1 Triticum aestivum ... 103 1e-020
gb|CK216187.1|CK216187 FGAS028172 Triticum aestivum FGAS: L... 103 1e-020
gb|BJ253140.1|BJ253140 BJ253140 Y. Ogihara unpublished cDNA... 101 5e-020
gb|BE417373.1|BE417373 MUG020.C12R990620 ITEC MUG Wheat Spi... 100 2e-019
gb|BQ579415.1|BQ579415 WHE2970_B07_D14ZS Wheat dormant embr... 100 2e-019
gb|CV764575.1|CV764575 FGAS058960 Triticum aestivum FGAS: L... 96 3e-018
gb|CD918158.1|CD918158 G608.108E03F010906 G608 Triticum aes... 92 5e-017
gb|CA639107.1|CA639107 wre1n.pk0019.h8 wre1n Triticum aesti... 82 5e-014
gb|BE402185.1|BE402185 CSB005C11F990908 ITEC CSB Wheat Endo... 76 3e-012
gb|BE414223.1|BE414223 SCU007.E10.R990714 ITEC SCU Wheat En... 76 3e-012
gb|BE423166.1|BE423166 WHE0061_C08_F15ZS Wheat endosperm cD... 76 3e-012
gb|BE423512.1|BE423512 WHE0071_H07_O13ZS Wheat endosperm cD... 76 3e-012
gb|BE500482.1|BE500482 WHE0987-0990_E03_E03ZS Wheat pre-ant... 76 3e-012
gb|BE606430.1|BE606430 WHE0904_H05_P10ZS Wheat 5-15 DAP spi... 76 3e-012
gb|BF294056.1|BF294056 WHE2161_F12_L23ZS Triticum turgidum ... 76 3e-012
gb|AW448131.1|AW448131 BRY_1724 BRY Triticum aestivum cDNA ... 76 3e-012
gb|AW448145.1|AW448145 BRY_1772 BRY Triticum aestivum cDNA ... 76 3e-012
gb|BG604908.1|BG604908 WHE0944_G11_N22ZS Wheat 5-15 DAP spi... 76 3e-012
gb|BM134547.1|BM134547 WHE0467-0470_B22_B22ZS Wheat Fusariu... 76 3e-012
gb|BQ239211.1|BQ239211 TaE05035G08R TaE05 Triticum aestivum... 76 3e-012
gb|BQ240008.1|BQ240008 TaE05023F03R TaE05 Triticum aestivum... 76 3e-012
gb|BQ240638.1|BQ240638 TaE05014G12R TaE05 Triticum aestivum... 76 3e-012
gb|BQ241178.1|BQ241178 TaE05008C10R TaE05 Triticum aestivum... 76 3e-012
gb|BQ245491.1|BQ245491 TaE15023H11R TaE15 Triticum aestivum... 76 3e-012
gb|BQ606092.1|BQ606092 BRY_1724 wheat EST endosperm library... 76 3e-012
gb|BQ606111.1|BQ606111 BRY_1772 wheat EST endosperm library... 76 3e-012
gb|BQ606704.1|BQ606704 BRY_2572 wheat EST endosperm library... 76 3e-012
gb|BQ607834.1|BQ607834 BRY_3732 wheat EST endosperm library... 76 3e-012
gb|BQ609293.1|BQ609293 BRY_5218 wheat EST endosperm library... 76 3e-012
gb|BQ609680.1|BQ609680 BRY_5699 wheat EST endosperm library... 76 3e-012
gb|BQ806933.1|BQ806933 WHE3584_G09_M18ZS Wheat developing g... 76 3e-012
gb|BJ235695.1|BJ235695 BJ235695 Y. Ogihara unpublished cDNA... 76 3e-012
gb|BJ245352.1|BJ245352 BJ245352 Y. Ogihara unpublished cDNA... 76 3e-012
gb|CA704974.1|CA704974 wdk1c.pk014.f1 wdk1c Triticum aestiv... 76 3e-012
gb|CA708863.1|CA708863 wdk2c.pk010.f18 wdk2c Triticum aesti... 76 3e-012
gb|CA708921.1|CA708921 wdk2c.pk011.i6 wdk2c Triticum aestiv... 76 3e-012
gb|CA708923.1|CA708923 wdk2c.pk011.c6 wdk2c Triticum aestiv... 76 3e-012
gb|CA726738.1|CA726738 wde1f.pk001.f1 wde1f Triticum aestiv... 76 3e-012
gb|BQ167980.1|BQ167980 WHE0023.F01F990702ZK Cheyenne wheat ... 76 3e-012
gb|CD908949.1|CD908949 G468.111G10F010818 G468 Triticum aes... 76 3e-012
gb|AJ613231.1|AJ613231 AJ613231 Triticum turgidum subsp. du... 76 3e-012
gb|AL812514.1|AL812514 AL812514 e:310 Triticum aestivum cDN... 76 3e-012
gb|AL814895.1|AL814895 AL814895 h:116 Triticum aestivum cDN... 76 3e-012
emb|AJ000153.1|TAAJ153 Triticum aestivum mRNA for sucrose s... 76 3e-012
gb|CK196231.1|CK196231 FGAS004681 Triticum aestivum FGAS: L... 74 1e-011
gb|BE416473.1|BE416473 MUG011.B04R990301 ITEC MUG Wheat Spi... 72 5e-011
gb|BE416489.1|BE416489 MUG011.C08R990317 ITEC MUG Wheat Spi... 72 5e-011
gb|BE585488.1|BE585488 EST#6PT7_A10_a10_069 KSU wheat Fusar... 72 5e-011
gb|BM136101.1|BM136101 WHE2602_F11_K22ZS Wheat Fusarium gra... 72 5e-011
gb|AL821304.1|AL821304 AL821304 p:133 Triticum aestivum cDN... 72 5e-011
gb|BQ752875.1|BQ752875 WHE4120_B08_D16ZS Wheat salt-stresse... 72 5e-011
gb|BU099442.1|BU099442 WHE3307_D11_H21ZS Chinese Spring whe... 72 5e-011
gb|CA613233.1|CA613233 wr1.pk0155.d4 wr1 Triticum aestivum ... 72 5e-011
gb|CA615343.1|CA615343 wr1.pk165.e2 wr1 Triticum aestivum c... 72 5e-011
gb|CK162177.1|CK162177 FGAS014763 Triticum aestivum FGAS: L... 72 5e-011
gb|CV522379.1|CV522379 RH-291 Triticum aestivum subtracted,... 72 5e-011
gb|CV764663.1|CV764663 FGAS059048 Triticum aestivum FGAS: L... 72 5e-011
gb|DN828809.1|DN828809 KUCD01_02_A03_T3 WSWR cDNA library T... 72 5e-011
gb|DR741025.1|DR741025 FGAS000957 Triticum aestivum FGAS: L... 72 5e-011
gb|BE414084.1|BE414084 SCU006.B03.R990714 ITEC SCU Wheat En... 70 2e-010
gb|BG314092.1|BG314092 WHE2459_A12_A23ZS Triticum monococcu... 70 2e-010
gb|CK210831.1|CK210831 FGAS022658 Triticum aestivum FGAS: L... 70 2e-010
gb|AJ611254.1|AJ611254 AJ611254 Triticum turgidum subsp. du... 70 2e-010
gb|BF473440.1|BF473440 WHE0924_D11_H22ZS Wheat 5-15 DAP spi... 68 7e-010
gb|BQ606770.1|BQ606770 BRY_2641 wheat EST endosperm library... 68 7e-010
emb|AJ001117.1|TASUCSYN1 Triticum aestivum mRNA for sucrose... 66 3e-009
gb|BG607281.1|BG607281 WHE2493_F03_L05ZS Triticum monococcu... 64 1e-008
gb|BQ802718.1|BQ802718 WHE2829_C02_E03ZS Triticum monococcu... 64 1e-008
gb|BJ280176.1|BJ280176 BJ280176 Y. Ogihara unpublished cDNA... 64 1e-008
gb|BJ280179.1|BJ280179 BJ280179 Y. Ogihara unpublished cDNA... 64 1e-008
gb|AJ610395.1|AJ610395 AJ610395 Triticum turgidum subsp. du... 64 1e-008
gb|AJ611924.1|AJ611924 AJ611924 Triticum turgidum subsp. du... 64 1e-008
gb|CV765782.1|CV765782 FGAS060169 Triticum aestivum FGAS: L... 64 1e-008
gb|BE401795.1|BE401795 CSB001C05F990908 ITEC CSB Wheat Endo... 62 5e-008
gb|BE497944.1|BE497944 WHE0958_E01_J02ZS Wheat pre-anthesis... 62 5e-008
gb|BF202844.1|BF202844 WHE1782_C01_E01ZS Wheat pre-anthesis... 62 5e-008
gb|BG262408.1|BG262408 WHE0872_F02_K04ZS Wheat 20-45 DAP sp... 62 5e-008
gb|BJ260454.1|BJ260454 BJ260454 Y. Ogihara unpublished cDNA... 62 5e-008
gb|BQ607358.1|BQ607358 BRY_3252 wheat EST endosperm library... 62 5e-008
gb|BQ743278.1|BQ743278 WHE4102_B08_C16ZS Wheat salt-stresse... 62 5e-008
gb|BJ247226.1|BJ247226 BJ247226 Y. Ogihara unpublished cDNA... 62 5e-008
gb|CD889849.1|CD889849 G118.113E11F010716 G118 Triticum aes... 62 5e-008
gb|CD891634.1|CD891634 G118.117P01F010724 G118 Triticum aes... 62 5e-008
gb|AL818369.1|AL818369 AL818369 j:223 Triticum aestivum cDN... 60 2e-007
gb|BQ744361.1|BQ744361 WHE4114_F11_K22ZS Wheat salt-stresse... 60 2e-007
gb|BF483284.1|BF483284 WHE1791_A08_A15ZS Wheat pre-anthesis... 56 3e-006
gb|AL825403.1|AL825403 AL825403 p:335 Triticum aestivum cDN... 56 3e-006
gb|AL826078.1|AL826078 AL826078 p:436 Triticum aestivum cDN... 56 3e-006
gb|BQ806313.1|BQ806313 WHE3577_C12_F23ZS Wheat developing g... 56 3e-006
gb|BJ280237.1|BJ280237 BJ280237 Y. Ogihara unpublished cDNA... 56 3e-006
gb|BJ282186.1|BJ282186 BJ282186 Y. Ogihara unpublished cDNA... 56 3e-006
gb|BJ303977.1|BJ303977 BJ303977 Y. Ogihara unpublished cDNA... 56 3e-006
gb|BJ304958.1|BJ304958 BJ304958 Y. Ogihara unpublished cDNA... 56 3e-006
gb|CA602906.1|CA602906 wr1.pk0007.d10 wr1 Triticum aestivum... 56 3e-006
gb|CF133766.1|CF133766 WHE4363_B10_C19ZT Wheat meiotic flor... 56 3e-006
gb|AL812909.1|AL812909 AL812909 e:411 Triticum aestivum cDN... 56 3e-006
gb|CV065573.1|CV065573 WNEL24a1 Wheat EST endosperm library... 56 3e-006
gb|CV775786.1|CV775786 FGAS070190 Triticum aestivum FGAS: L... 56 3e-006
gb|DN829338.1|DN829338 KUCD01_12_A04_T3 WSWR cDNA library T... 56 3e-006
gb|BQ838791.1|BQ838791 WHE3592_G05_M10ZS Wheat developing g... 54 1e-005
gb|CA741696.1|CA741696 wia1c.pk003.b7 wia1c Triticum aestiv... 54 1e-005
gb|AL811081.1|AL811081 AL811081 d:26 Triticum aestivum cDNA... 54 1e-005
gb|BE586050.1|BE586050 Est#8pT7_B03_b3_025 KSU wheat Fusari... 52 4e-005
gb|BJ268672.1|BJ268672 BJ268672 Y. Ogihara unpublished cDNA... 52 4e-005
gb|BJ281582.1|BJ281582 BJ281582 Y. Ogihara unpublished cDNA... 46 0.003
gb|BJ300673.1|BJ300673 BJ300673 Y. Ogihara unpublished cDNA... 46 0.003
gb|CA597354.1|CA597354 wpa1c.pk016.k3 wpa1c Triticum aestiv... 46 0.003
gb|CV770897.1|CV770897 FGAS065290 Triticum aestivum FGAS: L... 46 0.003
gb|DR736267.1|DR736267 FGAS081637 Triticum aestivum FGAS: L... 46 0.003
gb|BJ259779.1|BJ259779 BJ259779 Y. Ogihara unpublished cDNA... 44 0.011
gb|CV780854.1|CV780854 FGAS075265 Triticum aestivum FGAS: L... 44 0.011
gb|BQ170491.1|BQ170491 WHE1776_H07_O14ZT Wheat pre-anthesis... 42 0.042
gb|BJ278136.1|BJ278136 BJ278136 Y. Ogihara unpublished cDNA... 42 0.042
gb|CA621079.1|CA621079 wl1n.pk0072.e1 wl1n Triticum aestivu... 42 0.042
gb|CD880567.1|CD880567 F1.075C10F010126 F1 Triticum aestivu... 42 0.042
gb|CD897769.1|CD897769 G174.107A17F010822 G174 Triticum aes... 42 0.042
gb|CD931982.1|CD931982 GR45.116F02F010420 GR45 Triticum aes... 42 0.042
gb|CL900722.1|CL900722 CSHC0097 1639HC library Triticum aes... 40 0.17
gb|CA598197.1|CA598197 wyr1c.pk003.n17 wyr1c Triticum aesti... 40 0.17
gb|CK196536.1|CK196536 FGAS004995 Triticum aestivum FGAS: L... 40 0.17
>gb|CD490841.1|CD490841 WHE3006_G01_M02ZT Wheat etiolated seedling shoot normalized cDNA
library Triticum aestivum cDNA clone WHE3006_G01_M02,
mRNA sequence
Length = 740
Score = 220 bits (111), Expect = 8e-056
Identities = 165/185 (89%), Gaps = 1/185 (0%)
Strand = Plus / Plus
Query: 361 tcagccctggtcctgtacttcgtccacactcaactcccnnnnnnnnnngtctttgcatcg 420
||||||||||| |||||||||||||| ||||||||||| ||||||||||||
Sbjct: 447 tcagccctggttctgtacttcgtccatactcaactcccagtgcgacctgtctttgcatcg 506
Query: 421 tcgattggtttaggtatatctggccgcgcttctgtcggtgatggggtcgcgcttcaagaa 480
||||| |||||||||||| | ||| ||||||||||| |||||||||||||||||||||||
Sbjct: 507 tcgatcggtttaggtatagc-ggctgcgcttctgtcagtgatggggtcgcgcttcaagaa 565
Query: 481 gtccgggaagatgttcccagctggtgtcgtgtcccatgtatccctggtcatggtcggagg 540
|||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 566 gtccgggaagatattcccagctggtgtcgtgttccttgtatccctggtcatggtcggagg 625
Query: 541 ctact 545
|||||
Sbjct: 626 ctact 630
Score = 65.9 bits (33), Expect = 3e-009
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 329 tgggatatatgaagagtggaagccagaaatcct 361
|||||||||||||||||||||||||||||||||
Sbjct: 397 tgggatatatgaagagtggaagccagaaatcct 429
>gb|BJ271866.1|BJ271866 BJ271866 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh27o01 5', mRNA sequence
Length = 676
Score = 202 bits (102), Expect = 2e-050
Identities = 219/258 (84%)
Strand = Plus / Plus
Query: 1 accgagttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggag 60
|||| |||||||||||||| ||||| || |||||||||||||| ||||| ||||||||||
Sbjct: 143 accgcgttgtccatgggattgatgtttttgatccaaagttcaacatagtatctcctggag 202
Query: 61 ctgacatgtccatatactttccacataccgagaaggccaagcgactcacctctcttcatg 120
| |||||||| ||||| |||||| || || |||| |||||| ||||| | |||||||
Sbjct: 203 cagacatgtctatatattttccattcactgaaaaggacaagcggctcactgcccttcatg 262
Query: 121 gttcaatcgaaaatttgatttatgacccggagcaaaacgatgaacacattgggcatctgg 180
||||||| || | |||||||||||||| ||||||||||||| ||||||||| |||||||
Sbjct: 263 gttcaattgagagcttgatttatgacccagagcaaaacgatgtacacattggacatctgg 322
Query: 181 atgaccggtcaaagcccatcctcttctccatggcaagactcgacagggtgaagaacataa 240
||||||| ||||| || || |||||||||||||||||||| ||| | || || ||||| |
Sbjct: 323 atgaccgatcaaaaccaattctcttctccatggcaagacttgaccgtgttaaaaacatga 382
Query: 241 cagggctggtcgaagctt 258
|||| || || |||||||
Sbjct: 383 caggactagtggaagctt 400
>gb|CV781899.1|CV781899 FGAS076312 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 819
Score = 202 bits (102), Expect = 2e-050
Identities = 249/298 (83%)
Strand = Plus / Plus
Query: 1 accgagttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggag 60
|||| ||||| |||||||| ||||| || |||||||||||||| ||||| ||||||||||
Sbjct: 188 accgcgttgttcatgggattgatgtttttgatccaaagttcaacatagtatctcctggag 247
Query: 61 ctgacatgtccatatactttccacataccgagaaggccaagcgactcacctctcttcatg 120
| |||||||| ||||| |||||| || || |||| |||||| ||||| | |||||||
Sbjct: 248 cagacatgtctatatattttccattcactgaaaaggacaagcggctcactgcccttcatg 307
Query: 121 gttcaatcgaaaatttgatttatgacccggagcaaaacgatgaacacattgggcatctgg 180
||||||| || | |||||||||||||| ||||||||||||| ||||||||| |||||||
Sbjct: 308 gttcaattgagagcttgatttatgacccagagcaaaacgatgtacacattggacatctgg 367
Query: 181 atgaccggtcaaagcccatcctcttctccatggcaagactcgacagggtgaagaacataa 240
||||||| ||||| || || |||||||||||||||||||| ||| | || || ||||| |
Sbjct: 368 atgaccgatcaaaaccaattctcttctccatggcaagacttgaccgtgttaaaaacatga 427
Query: 241 cagggctggtcgaagcttttgctaagtgcgctaagctgagggagctggtaaaccttgt 298
|||| || || ||||||| | ||| ||||||||| ||| |||||||||||||||
Sbjct: 428 caggactagtggaagcttatagtaaaaacgctaagctaaggtcgctggtaaaccttgt 485
>gb|CA612691.1|CA612691 wr1.pk0138.g9 wr1 Triticum aestivum cDNA clone wr1.pk0138.g9 5'
end, mRNA sequence
Length = 403
Score = 103 bits (52), Expect = 1e-020
Identities = 145/178 (81%), Gaps = 1/178 (0%)
Strand = Plus / Plus
Query: 367 ctggtcctgtacttcgtccacactcaactcccnnnnnnnnnngtctttgcatcgtcgatt 426
||||| |||| |||||| |||||||||||||| |||||||||||| ||||
Sbjct: 47 ctggtgctgttcttcgttcacactcaactcccagtgagaccagtctttgcatcggcgatc 106
Query: 427 ggtttaggtatatctggccgcgcttctgtcggtgatggggtcgcgcttcaagaagtccgg 486
|| ||||||||||| ||| ||||| ||||| || ||||| || |||||||||||||||||
Sbjct: 107 gggttaggtatatc-ggctgcgctgctgtcagtcatgggatctcgcttcaagaagtccgg 165
Query: 487 gaagatgttcccagctggtgtcgtgtcccatgtatccctggtcatggtcggaggctac 544
||||| ||||||||||| || ||||||| | | ||| |||||||||| || ||||||
Sbjct: 166 aaagatattcccagctggcgttgtgtcccttctttccttggtcatggttggcggctac 223
>gb|CK216187.1|CK216187 FGAS028172 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1086
Score = 103 bits (52), Expect = 1e-020
Identities = 145/178 (81%), Gaps = 1/178 (0%)
Strand = Plus / Minus
Query: 367 ctggtcctgtacttcgtccacactcaactcccnnnnnnnnnngtctttgcatcgtcgatt 426
||||| |||| |||||| |||||||||||||| |||||||||||| ||||
Sbjct: 482 ctggtgctgttcttcgttcacactcaactcccagtgagaccagtctttgcatcggcgatc 423
Query: 427 ggtttaggtatatctggccgcgcttctgtcggtgatggggtcgcgcttcaagaagtccgg 486
|| ||||||||||| ||| ||||| ||||| || ||||| || |||||||||||||||||
Sbjct: 422 gggttaggtatatc-ggctgcgctgctgtcagtcatgggatctcgcttcaagaagtccgg 364
Query: 487 gaagatgttcccagctggtgtcgtgtcccatgtatccctggtcatggtcggaggctac 544
||||| ||||||||||| || ||||||| | | ||| |||||||||| || ||||||
Sbjct: 363 aaagatattcccagctggcgttgtgtcccttctttccttggtcatggttggcggctac 306
>gb|BJ253140.1|BJ253140 BJ253140 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf27i13 3', mRNA sequence
Length = 639
Score = 101 bits (51), Expect = 5e-020
Identities = 144/177 (81%), Gaps = 1/177 (0%)
Strand = Plus / Minus
Query: 361 tcagccctggtcctgtacttcgtccacactcaactcccnnnnnnnnnngtctttgcatcg 420
||||||||||| |||| |||||| |||||||||||||| |||||||| |||
Sbjct: 447 tcagccctggtgctgttcttcgttcacactcaactcccagtgagaccagtctttgcgtcg 388
Query: 421 tcgattggtttaggtatatctggccgcgcttctgtcggtgatggggtcgcgcttcaagaa 480
|||| || ||||||||||| ||| || || ||||| || ||||| || |||||||||||
Sbjct: 387 gcgatcgggttaggtatatc-ggctgcactgctgtcagtcatgggatctcgcttcaagaa 329
Query: 481 gtccgggaagatgttcccagctggtgtcgtgtcccatgtatccctggtcatggtcgg 537
|||||| ||||| |||||||| || |||||||||| | | ||| |||||||||||||
Sbjct: 328 gtccggaaagatattcccagccggcgtcgtgtcccttctttccttggtcatggtcgg 272
>gb|BE417373.1|BE417373 MUG020.C12R990620 ITEC MUG Wheat Spikelet Library Triticum aestivum
cDNA clone MUG020.C12, mRNA sequence
Length = 570
Score = 99.6 bits (50), Expect = 2e-019
Identities = 149/184 (80%), Gaps = 1/184 (0%)
Strand = Plus / Plus
Query: 361 tcagccctggtcctgtacttcgtccacactcaactcccnnnnnnnnnngtctttgcatcg 420
||||||||||| |||| |||||| ||||||||||| || |||||||| ||
Sbjct: 104 tcagccctggtgctgttcttcgttcacactcaactaccagtgagacccgtctttgcgtca 163
Query: 421 tcgattggtttaggtatatctggccgcgcttctgtcggtgatggggtcgcgcttcaagaa 480
|||| || ||||||||||| ||| || || ||||| || |||||||| |||||||||||
Sbjct: 164 gcgatcgggttaggtatatc-ggctgcactgctgtcagtcatggggtctcgcttcaagaa 222
Query: 481 gtccgggaagatgttcccagctggtgtcgtgtcccatgtatccctggtcatggtcggagg 540
|||||| ||||| |||||||| || |||||||||| | ||| ||||||||||||||||
Sbjct: 223 gtccggaaagatattcccagccggcgtcgtgtccctcctttccttggtcatggtcggagg 282
Query: 541 ctac 544
||||
Sbjct: 283 ctac 286
>gb|BQ579415.1|BQ579415 WHE2970_B07_D14ZS Wheat dormant embryo cDNA library Triticum
aestivum cDNA clone WHE2970_B07_D14, mRNA sequence
Length = 581
Score = 99.6 bits (50), Expect = 2e-019
Identities = 149/184 (80%), Gaps = 1/184 (0%)
Strand = Plus / Plus
Query: 361 tcagccctggtcctgtacttcgtccacactcaactcccnnnnnnnnnngtctttgcatcg 420
||||||||||| |||| |||||| ||||||||||| || |||||||| ||
Sbjct: 123 tcagccctggtgctgttcttcgttcacactcaactaccagtgagacccgtctttgcgtca 182
Query: 421 tcgattggtttaggtatatctggccgcgcttctgtcggtgatggggtcgcgcttcaagaa 480
|||| || ||||||||||| ||| || || ||||| || |||||||| |||||||||||
Sbjct: 183 gcgatcgggttaggtatatc-ggctgcactgctgtcagtcatggggtctcgcttcaagaa 241
Query: 481 gtccgggaagatgttcccagctggtgtcgtgtcccatgtatccctggtcatggtcggagg 540
|||||| ||||| |||||||| || |||||||||| | ||| ||||||||||||||||
Sbjct: 242 gtccggaaagatattcccagccggcgtcgtgtccctcctttccttggtcatggtcggagg 301
Query: 541 ctac 544
||||
Sbjct: 302 ctac 305
>gb|CV764575.1|CV764575 FGAS058960 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 843
Score = 95.6 bits (48), Expect = 3e-018
Identities = 144/178 (80%), Gaps = 1/178 (0%)
Strand = Plus / Plus
Query: 367 ctggtcctgtacttcgtccacactcaactcccnnnnnnnnnngtctttgcatcgtcgatt 426
||||| |||| |||||| |||||||||||||| |||||||||||| ||||
Sbjct: 553 ctggtgctgttcttcgttcacactcaactcccagtgagaccagtctttgcatcggcgatc 612
Query: 427 ggtttaggtatatctggccgcgcttctgtcggtgatggggtcgcgcttcaagaagtccgg 486
|| ||||||||||| ||| ||||| ||||| || ||||| || |||||||||||||||||
Sbjct: 613 gggttaggtatatc-ggctgcgctgctgtcagtcatgggatctcgcttcaagaagtccgg 671
Query: 487 gaagatgttcccagctggtgtcgtgtcccatgtatccctggtcatggtcggaggctac 544
||||| ||||||||||| || ||||||| | | ||| ||| |||||| || ||||||
Sbjct: 672 aaagatattcccagctggcgttgtgtcccttctttccttggacatggttggcggctac 729
>gb|CD918158.1|CD918158 G608.108E03F010906 G608 Triticum aestivum cDNA clone G608108E03,
mRNA sequence
Length = 585
Score = 91.7 bits (46), Expect = 5e-017
Identities = 148/184 (80%), Gaps = 1/184 (0%)
Strand = Plus / Plus
Query: 361 tcagccctggtcctgtacttcgtccacactcaactcccnnnnnnnnnngtctttgcatcg 420
||||||||||| |||| |||||| |||||||||||||| |||||||| |||
Sbjct: 287 tcagccctggtgctgttcttcgttcacactcaactcccagtgagaccagtctttgcgtcg 346
Query: 421 tcgattggtttaggtatatctggccgcgcttctgtcggtgatggggtcgcgcttcaagaa 480
|||| || ||||||||||| | | || || ||||| || ||||| || |||||||||||
Sbjct: 347 gcgatcgggttaggtatatcag-ctgcactgctgtcagtcatgggatctcgcttcaagaa 405
Query: 481 gtccgggaagatgttcccagctggtgtcgtgtcccatgtatccctggtcatggtcggagg 540
|||||| ||||| ||||||||||| || ||||||| | | ||| |||||||||| || ||
Sbjct: 406 gtccggaaagatattcccagctggcgtggtgtcccttctttccttggtcatggttggcgg 465
Query: 541 ctac 544
||||
Sbjct: 466 ctac 469
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 337 atgaagagtggaagccagaa 356
||||||||||||||||||||
Sbjct: 245 atgaagagtggaagccagaa 264
>gb|CA639107.1|CA639107 wre1n.pk0019.h8 wre1n Triticum aestivum cDNA clone wre1n.pk0019.h8
5' end, mRNA sequence
Length = 286
Score = 81.8 bits (41), Expect = 5e-014
Identities = 140/177 (79%), Gaps = 1/177 (0%)
Strand = Plus / Plus
Query: 361 tcagccctggtcctgtacttcgtccacactcaactcccnnnnnnnnnngtctttgcatcg 420
||||||||||| |||| |||||| |||||||||||||| ||||||| |||
Sbjct: 102 tcagccctggtgctgttcttcgttcacactcaactcccagtgagaccantctttgcgtcg 161
Query: 421 tcgattggtttaggtatatctggccgcgcttctgtcggtgatggggtcgcgcttcaagaa 480
|||| || ||||||||||| ||| || || ||||| || ||||| || |||||||||||
Sbjct: 162 gcgatcgggttaggtatatc-ggctgcactgctgtcagtcatgggatctcgcttcaagaa 220
Query: 481 gtccgggaagatgttcccagctggtgtcgtgtcccatgtatccctggtcatggtcgg 537
|||||| ||||| |||||||| || ||| |||||| | | || ||| |||||||||
Sbjct: 221 gtccggaaagatnttcccagcnggcgtcttgtcccttctttcnntggncatggtcgg 277
>gb|BE402185.1|BE402185 CSB005C11F990908 ITEC CSB Wheat Endosperm Library Triticum aestivum
cDNA clone CSB005C11, mRNA sequence
Length = 495
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 319 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 378
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 379 atgtccatctactt 392
>gb|BE414223.1|BE414223 SCU007.E10.R990714 ITEC SCU Wheat Endosperm Library Triticum
aestivum cDNA clone SCU007.E10, mRNA sequence
Length = 676
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 378 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 437
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 438 atgtccatctactt 451
>gb|BE423166.1|BE423166 WHE0061_C08_F15ZS Wheat endosperm cDNA library Triticum aestivum
cDNA clone WHE0061_C08_F15, mRNA sequence
Length = 378
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 113 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 172
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 173 atgtccatctactt 186
>gb|BE423512.1|BE423512 WHE0071_H07_O13ZS Wheat endosperm cDNA library Triticum aestivum
cDNA clone WHE0071_H07_O13, mRNA sequence
Length = 583
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 119 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 178
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 179 atgtccatctactt 192
>gb|BE500482.1|BE500482 WHE0987-0990_E03_E03ZS Wheat pre-anthesis spike cDNA library
Triticum aestivum cDNA clone WHE0987-0990_E03_E03, mRNA
sequence
Length = 309
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 136 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 195
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 196 atgtccatctactt 209
>gb|BE606430.1|BE606430 WHE0904_H05_P10ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0904_H05_P10, mRNA sequence
Length = 437
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 290 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 349
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 350 atgtccatctactt 363
>gb|BF294056.1|BF294056 WHE2161_F12_L23ZS Triticum turgidum L. var. durum (durum wheat)
whole plant cDNA library Triticum turgidum cDNA clone
WHE2161_F12_L23, mRNA sequence
Length = 556
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 400 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 459
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 460 atgtccatctactt 473
>gb|AW448131.1|AW448131 BRY_1724 BRY Triticum aestivum cDNA clone P46-11F, mRNA sequence
Length = 832
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 444 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 503
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 504 atgtccatctactt 517
>gb|AW448145.1|AW448145 BRY_1772 BRY Triticum aestivum cDNA clone P61-1A, mRNA sequence
Length = 816
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 470 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 529
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 530 atgtccatctactt 543
>gb|BG604908.1|BG604908 WHE0944_G11_N22ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0944_G11_N22, mRNA sequence
Length = 394
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 290 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 349
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 350 atgtccatctactt 363
>gb|BM134547.1|BM134547 WHE0467-0470_B22_B22ZS Wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
WHE0467-0470_B22_B22, mRNA sequence
Length = 525
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 28 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 87
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 88 atgtccatctactt 101
>gb|BQ239211.1|BQ239211 TaE05035G08R TaE05 Triticum aestivum cDNA clone TaE05035G08R, mRNA
sequence
Length = 586
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 121 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 180
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 181 atgtccatctactt 194
>gb|BQ240008.1|BQ240008 TaE05023F03R TaE05 Triticum aestivum cDNA clone TaE05023F03R, mRNA
sequence
Length = 660
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 568 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 627
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 628 atgtccatctactt 641
>gb|BQ240638.1|BQ240638 TaE05014G12R TaE05 Triticum aestivum cDNA clone TaE05014G12R, mRNA
sequence
Length = 583
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 124 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 183
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 184 atgtccatctactt 197
>gb|BQ241178.1|BQ241178 TaE05008C10R TaE05 Triticum aestivum cDNA clone TaE05008C10R, mRNA
sequence
Length = 635
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 544 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 603
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 604 atgtccatctactt 617
>gb|BQ245491.1|BQ245491 TaE15023H11R TaE15 Triticum aestivum cDNA clone TaE15023H11R, mRNA
sequence
Length = 631
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 292 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 351
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 352 atgtccatctactt 365
>gb|BQ606092.1|BQ606092 BRY_1724 wheat EST endosperm library Triticum aestivum cDNA 5',
mRNA sequence
Length = 832
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 444 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 503
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 504 atgtccatctactt 517
>gb|BQ606111.1|BQ606111 BRY_1772 wheat EST endosperm library Triticum aestivum cDNA 5',
mRNA sequence
Length = 816
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 470 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 529
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 530 atgtccatctactt 543
>gb|BQ606704.1|BQ606704 BRY_2572 wheat EST endosperm library Triticum aestivum cDNA 5',
mRNA sequence
Length = 559
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 261 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 320
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 321 atgtccatctactt 334
>gb|BQ607834.1|BQ607834 BRY_3732 wheat EST endosperm library Triticum aestivum cDNA 5',
mRNA sequence
Length = 495
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 319 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 378
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 379 atgtccatctactt 392
>gb|BQ609293.1|BQ609293 BRY_5218 wheat EST endosperm library Triticum aestivum cDNA 5',
mRNA sequence
Length = 595
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 105 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 164
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 165 atgtccatctactt 178
>gb|BQ609680.1|BQ609680 BRY_5699 wheat EST endosperm library Triticum aestivum cDNA 5',
mRNA sequence
Length = 874
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 72 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 131
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 132 atgtccatctactt 145
>gb|BQ806933.1|BQ806933 WHE3584_G09_M18ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3584_G09_M18, mRNA sequence
Length = 743
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 454 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 513
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 514 atgtccatctactt 527
>gb|BJ235695.1|BJ235695 BJ235695 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe17n12 5', mRNA sequence
Length = 627
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 342 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 401
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 402 atgtccatctactt 415
>gb|BJ245352.1|BJ245352 BJ245352 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19c14 5', mRNA sequence
Length = 555
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 245 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 304
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 305 atgtccatctactt 318
>gb|CA704974.1|CA704974 wdk1c.pk014.f1 wdk1c Triticum aestivum cDNA clone wdk1c.pk014.f1 5'
end, mRNA sequence
Length = 466
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 87 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 146
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 147 atgtccatctactt 160
>gb|CA708863.1|CA708863 wdk2c.pk010.f18 wdk2c Triticum aestivum cDNA clone wdk2c.pk010.f18
5' end, mRNA sequence
Length = 489
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 113 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 172
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 173 atgtccatctactt 186
>gb|CA708921.1|CA708921 wdk2c.pk011.i6 wdk2c Triticum aestivum cDNA clone wdk2c.pk011.i6 5'
end, mRNA sequence
Length = 505
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 127 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 68
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 67 atgtccatctactt 54
>gb|CA708923.1|CA708923 wdk2c.pk011.c6 wdk2c Triticum aestivum cDNA clone wdk2c.pk011.c6 5'
end, mRNA sequence
Length = 525
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 124 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 183
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 184 atgtccatctactt 197
>gb|CA726738.1|CA726738 wde1f.pk001.f1 wde1f Triticum aestivum cDNA clone wde1f.pk001.f1 5'
end, mRNA sequence
Length = 359
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 69 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 128
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 129 atgtccatctactt 142
>gb|BQ167980.1|BQ167980 WHE0023.F01F990702ZK Cheyenne wheat endosperm cDNA library Triticum
aestivum cDNA clone WHE0023.F01F990702, mRNA sequence
Length = 477
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 210 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 269
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 270 atgtccatctactt 283
>gb|CD908949.1|CD908949 G468.111G10F010818 G468 Triticum aestivum cDNA clone G468111G10,
mRNA sequence
Length = 724
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 557 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 616
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 617 atgtccatctactt 630
>gb|AJ613231.1|AJ613231 AJ613231 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 08465R, mRNA
sequence
Length = 567
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 458 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 517
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 518 atgtccatctactt 531
>gb|AL812514.1|AL812514 AL812514 e:310 Triticum aestivum cDNA clone A02_e310_plate_5, mRNA
sequence
Length = 573
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 76 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 135
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 136 atgtccatctactt 149
>gb|AL814895.1|AL814895 AL814895 h:116 Triticum aestivum cDNA clone G11_h116_plate_4, mRNA
sequence
Length = 518
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 242 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 301
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 302 atgtccatctactt 315
>emb|AJ000153.1|TAAJ153 Triticum aestivum mRNA for sucrose synthase type 2
Length = 2721
Score = 75.8 bits (38), Expect = 3e-012
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggagctgac 65
||||||||||| || ||||||||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 1547 gttgtccatggtattgatgtcttcgaccccaagttcaacatcgtctcccctggtgctgac 1606
Query: 66 atgtccatatactt 79
|||||||| |||||
Sbjct: 1607 atgtccatctactt 1620
>gb|CK196231.1|CK196231 FGAS004681 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 861
Score = 73.8 bits (37), Expect = 1e-011
Identities = 79/93 (84%)
Strand = Plus / Minus
Query: 452 ctgtcggtgatggggtcgcgcttcaagaagtccgggaagatgttcccagctggtgtcgtg 511
||||| || ||||| || ||||||||||||||||| ||||| ||||||||||| || |||
Sbjct: 468 ctgtcagtcatgggatctcgcttcaagaagtccggaaagatattcccagctggcgttgtg 409
Query: 512 tcccatgtatccctggtcatggtcggaggctac 544
|||| | | ||| |||||||||| || ||||||
Sbjct: 408 tcccttctttccttggtcatggttggcggctac 376
>gb|BE416473.1|BE416473 MUG011.B04R990301 ITEC MUG Wheat Spikelet Library Triticum aestivum
cDNA clone MUG011.B04, mRNA sequence
Length = 536
Score = 71.9 bits (36), Expect = 5e-011
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 1 accgagttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggag 60
|||| |||||||||||||| ||||| || ||||| |||||||| || |||||||||||||
Sbjct: 407 accgggttgtccatgggattgatgtgtttgatcctaagttcaacatcgtctctcctggag 466
Query: 61 ctgacatg 68
| ||||||
Sbjct: 467 cagacatg 474
>gb|BE416489.1|BE416489 MUG011.C08R990317 ITEC MUG Wheat Spikelet Library Triticum aestivum
cDNA clone MUG011.C08, mRNA sequence
Length = 999
Score = 71.9 bits (36), Expect = 5e-011
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 1 accgagttgtccatgggatcgatgtcttcgatccaaagttcaatatagtctctcctggag 60
|||| |||||||||||||| ||||| || ||||| |||||||| || |||||||||||||
Sbjct: 408 accgggttgtccatgggattgatgtgtttgatcctaagttcaacatcgtctctcctggag 467
Query: 61 ctgacatg 68
| ||||||
Sbjct: 468 cagacatg 475
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 101,174
Number of Sequences: 636343
Number of extensions: 101174
Number of successful extensions: 27448
Number of sequences better than 0.5: 123
Number of HSP's better than 0.5 without gapping: 122
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 27240
Number of HSP's gapped (non-prelim): 197
length of query: 589
length of database: 367,240,239
effective HSP length: 19
effective length of query: 570
effective length of database: 355,149,722
effective search space: 202435341540
effective search space used: 202435341540
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)