BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3185308.2.1
(1019 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ254143.1|BJ254143 BJ254143 Y. Ogihara unpublished cDNA... 145 7e-033
gb|BJ248015.1|BJ248015 BJ248015 Y. Ogihara unpublished cDNA... 101 9e-020
gb|BE427223.1|BE427223 PSR6135 ITEC PSR Wheat Pericarp/Test... 62 8e-008
gb|BE427226.1|BE427226 PSR6138 ITEC PSR Wheat Pericarp/Test... 62 8e-008
gb|BE515834.1|BE515834 WHE0606_C03_E06ZA Wheat ABA-treated ... 62 8e-008
gb|BJ314216.1|BJ314216 BJ314216 Y. Ogihara unpublished cDNA... 62 8e-008
gb|AL819700.1|AL819700 AL819700 n:129 Triticum aestivum cDN... 62 8e-008
gb|BQ839416.1|BQ839416 WHE4165_H03_P05ZS Wheat CS whole pla... 62 8e-008
gb|CA499840.1|CA499840 WHE4012_C08_F16ZT Wheat meiotic anth... 62 8e-008
gb|AJ611080.1|AJ611080 AJ611080 Triticum turgidum subsp. du... 62 8e-008
gb|DR736988.1|DR736988 FGAS082358 Triticum aestivum FGAS: L... 58 1e-006
gb|BE499243.1|BE499243 WHE0972_F06_K12ZS Wheat pre-anthesis... 56 5e-006
gb|BM136366.1|BM136366 WHE2609_A10_A19ZS Wheat Fusarium gra... 54 2e-005
gb|BE517456.1|BE517456 WHE0626_A11_A22ZA Wheat ABA-treated ... 50 3e-004
gb|CD894504.1|CD894504 G118.126G10F010823 G118 Triticum aes... 50 3e-004
gb|CD937691.1|CD937691 OV.107N15F010205 OV Triticum aestivu... 50 3e-004
gb|CN009796.1|CN009796 WHE3862_H04_P08ZS Wheat Fusarium gra... 50 3e-004
gb|CV764564.1|CV764564 FGAS058949 Triticum aestivum FGAS: L... 50 3e-004
gb|CV782040.1|CV782040 FGAS076453 Triticum aestivum FGAS: L... 50 3e-004
gb|CA698026.1|CA698026 wlk4.pk0023.g4 wlk4 Triticum aestivu... 48 0.001
gb|CA707014.1|CA707014 wdk2c.pk0003.b6 wdk2c Triticum aesti... 48 0.001
gb|CA730445.1|CA730445 wip1c.pk004.b18 wip1c Triticum aesti... 48 0.001
gb|CD873520.1|CD873520 AZO3.100B01F010925 AZO3 Triticum aes... 48 0.001
gb|CD873521.1|CD873521 AZO3.100B01F011011 AZO3 Triticum aes... 48 0.001
gb|CD899117.1|CD899117 G174.111C22F010827 G174 Triticum aes... 48 0.001
gb|CK162230.1|CK162230 FGAS014818 Triticum aestivum FGAS: L... 48 0.001
gb|CK193405.1|CK193405 FGAS001819 Triticum aestivum FGAS: L... 48 0.001
gb|CV765677.1|CV765677 FGAS060064 Triticum aestivum FGAS: L... 48 0.001
gb|CV773972.1|CV773972 FGAS068369 Triticum aestivum FGAS: L... 48 0.001
gb|CV778740.1|CV778740 FGAS073149 Triticum aestivum FGAS: L... 48 0.001
gb|CV778767.1|CV778767 FGAS073176 Triticum aestivum FGAS: L... 48 0.001
gb|DR735788.1|DR735788 FGAS081422 Triticum aestivum FGAS: L... 48 0.001
gb|BJ214280.1|BJ214280 BJ214280 Y. Ogihara unpublished cDNA... 46 0.005
gb|BJ221768.1|BJ221768 BJ221768 Y. Ogihara unpublished cDNA... 46 0.005
gb|BJ280310.1|BJ280310 BJ280310 Y. Ogihara unpublished cDNA... 46 0.005
gb|BJ285296.1|BJ285296 BJ285296 Y. Ogihara unpublished cDNA... 46 0.005
gb|BJ285550.1|BJ285550 BJ285550 Y. Ogihara unpublished cDNA... 46 0.005
gb|BJ302105.1|BJ302105 BJ302105 Y. Ogihara unpublished cDNA... 46 0.005
gb|BQ240271.1|BQ240271 TaE05019G08R TaE05 Triticum aestivum... 46 0.005
gb|BQ608900.1|BQ608900 BRY_4816 wheat EST endosperm library... 46 0.005
gb|BQ839374.1|BQ839374 WHE4165_D06_H11ZS Wheat CS whole pla... 46 0.005
gb|CA714338.1|CA714338 wdk3c.pk018.l12 wdk3c Triticum aesti... 46 0.005
gb|CD454188.1|CD454188 WHE0990_H02_P04ZT CS wheat pre-anthe... 46 0.005
gb|CD862203.1|CD862203 AZO1.102M08F010126 AZO1 Triticum aes... 46 0.005
gb|CK196683.1|CK196683 FGAS005143 Triticum aestivum FGAS: L... 46 0.005
gb|CK209163.1|CK209163 FGAS020911 Triticum aestivum FGAS: L... 46 0.005
gb|CK210097.1|CK210097 FGAS021888 Triticum aestivum FGAS: L... 46 0.005
gb|CV774820.1|CV774820 FGAS069220 Triticum aestivum FGAS: L... 46 0.005
gb|DR737942.1|DR737942 FGAS083159 Triticum aestivum FGAS: L... 46 0.005
gb|DR739882.1|DR739882 FGAS000149 Triticum aestivum FGAS: L... 46 0.005
gb|AY589584.1| Triticum aestivum alpha-expansin EXPA2 mRNA,... 46 0.005
gb|AY543529.1| Triticum aestivum expansin EXPA3 mRNA, compl... 46 0.005
gb|BE499740.1|BE499740 WHE0975_G03_M05ZS Wheat pre-anthesis... 44 0.019
gb|BF483380.1|BF483380 WHE1794_B07_D14ZS Wheat pre-anthesis... 44 0.019
gb|BG906964.1|BG906964 TaLr1156A11R TaLr1 Triticum aestivum... 44 0.019
gb|CD882646.1|CD882646 F1.110J14F010531 F1 Triticum aestivu... 44 0.019
gb|CD891977.1|CD891977 G118.119D17F010724 G118 Triticum aes... 44 0.019
gb|CD896698.1|CD896698 G174.103K21F010822 G174 Triticum aes... 44 0.019
gb|CD931182.1|CD931182 GR45.113L20F010511 GR45 Triticum aes... 44 0.019
gb|CD934160.1|CD934160 GR45.123D11F010723 GR45 Triticum aes... 44 0.019
gb|CN009913.1|CN009913 WHE3864_C04_E08ZS Wheat Fusarium gra... 44 0.019
gb|CN011610.1|CN011610 WHE3886_C10_F20ZS Wheat Fusarium gra... 44 0.019
gb|CV767775.1|CV767775 FGAS062166 Triticum aestivum FGAS: L... 44 0.019
gb|CV771159.1|CV771159 FGAS065552 Triticum aestivum FGAS: L... 44 0.019
gb|CV781876.1|CV781876 FGAS076289 Triticum aestivum FGAS: L... 44 0.019
gb|AY910580.1| Triticum aestivum expansin EXPA10 mRNA, comp... 44 0.019
gb|AY910581.1| Triticum aestivum expansin EXPA11 mRNA, comp... 44 0.019
gb|AY910582.1| Triticum aestivum expansin EXPA12 mRNA, comp... 44 0.019
gb|AY485121.3| Triticum aestivum expansin EXPA1 mRNA, compl... 44 0.019
gb|BE399087.1|BE399087 WHE0030.D10F990514 ITEC WHE Wheat En... 42 0.074
gb|CD863818.1|CD863818 AZO1.108C09F010131 AZO1 Triticum aes... 42 0.074
gb|CD891575.1|CD891575 G118.117M09F010723 G118 Triticum aes... 42 0.074
gb|CD892359.1|CD892359 G118.120L11F010725 G118 Triticum aes... 42 0.074
gb|CK205372.1|CK205372 FGAS016850 Triticum aestivum FGAS: L... 42 0.074
gb|BE423382.1|BE423382 WHE0065_E03_J05ZS Wheat endosperm cD... 40 0.29
gb|BE423973.1|BE423973 WHE0066_E03_J06ZS Wheat endosperm cD... 40 0.29
gb|BM135648.1|BM135648 WHE2622_D03_G06ZS Wheat Fusarium gra... 40 0.29
gb|BM135688.1|BM135688 WHE2622_H03_O06ZS Wheat Fusarium gra... 40 0.29
gb|BJ245680.1|BJ245680 BJ245680 Y. Ogihara unpublished cDNA... 40 0.29
gb|BJ289064.1|BJ289064 BJ289064 Y. Ogihara unpublished cDNA... 40 0.29
gb|BJ289392.1|BJ289392 BJ289392 Y. Ogihara unpublished cDNA... 40 0.29
gb|BJ293044.1|BJ293044 BJ293044 Y. Ogihara unpublished cDNA... 40 0.29
gb|BQ237273.1|BQ237273 TaE05019D09F TaE05 Triticum aestivum... 40 0.29
gb|BQ609347.1|BQ609347 BRY_5272 wheat EST endosperm library... 40 0.29
gb|BQ609396.1|BQ609396 BRY_5323 wheat EST endosperm library... 40 0.29
gb|AL823256.1|AL823256 AL823256 p:133 Triticum aestivum cDN... 40 0.29
gb|AL830760.1|AL830760 AL830760 q:242 Triticum aestivum cDN... 40 0.29
gb|BQ805594.1|BQ805594 WHE3568_G11_M22ZS Wheat developing g... 40 0.29
gb|BQ838243.1|BQ838243 WHE2908_B08_D16ZS Wheat aluminum-str... 40 0.29
gb|CA499752.1|CA499752 WHE4011_B06_D11ZT Wheat meiotic anth... 40 0.29
gb|CA595038.1|CA595038 wpa1c.pk008.l13 wpa1c Triticum aesti... 40 0.29
gb|CA620843.1|CA620843 wl1n.pk0069.f5 wl1n Triticum aestivu... 40 0.29
gb|CA635927.1|CA635927 wle1n.pk0096.f11 wle1n Triticum aest... 40 0.29
gb|CA708815.1|CA708815 wdk2c.pk010.h17 wdk2c Triticum aesti... 40 0.29
gb|CA709246.1|CA709246 wdk2c.pk012.k19 wdk2c Triticum aesti... 40 0.29
gb|CA710083.1|CA710083 wdk2c.pk017.p9 wdk2c Triticum aestiv... 40 0.29
gb|CA710890.1|CA710890 wdk2c.pk014.a12 wdk2c Triticum aesti... 40 0.29
gb|CA710973.1|CA710973 wdk2c.pk019.i5 wdk2c Triticum aestiv... 40 0.29
gb|CA730966.1|CA730966 wip1c.pk007.e15 wip1c Triticum aesti... 40 0.29
gb|CA741622.1|CA741622 wia1c.pk003.e8 wia1c Triticum aestiv... 40 0.29
gb|BQ167841.1|BQ167841 WHE0006.C08F000701ZK Cheyenne wheat ... 40 0.29
gb|CD491980.1|CD491980 WHE2451_G07_M13ZT Triticum monococcu... 40 0.29
gb|CD879441.1|CD879441 AZO4.105D19F011012 AZO4 Triticum aes... 40 0.29
gb|CD899934.1|CD899934 G174.114A17F010824 G174 Triticum aes... 40 0.29
gb|CD926884.1|CD926884 GR45.100F01F010302 GR45 Triticum aes... 40 0.29
gb|CD932765.1|CD932765 GR45.118P14F010718 GR45 Triticum aes... 40 0.29
gb|CK201108.1|CK201108 FGAS009627 Triticum aestivum FGAS: L... 40 0.29
gb|CK203787.1|CK203787 FGAS012320 Triticum aestivum FGAS: L... 40 0.29
gb|CK208654.1|CK208654 FGAS020368 Triticum aestivum FGAS: L... 40 0.29
gb|CK209484.1|CK209484 FGAS021251 Triticum aestivum FGAS: L... 40 0.29
gb|CK213984.1|CK213984 FGAS025899 Triticum aestivum FGAS: L... 40 0.29
gb|CN012811.1|CN012811 WHE3953_C05_F09ZS Wheat Fusarium gra... 40 0.29
gb|AL810395.1|AL810395 AL810395 e:29 Triticum aestivum cDNA... 40 0.29
gb|CV762163.1|CV762163 FGAS056552 Triticum aestivum FGAS: L... 40 0.29
gb|CV767863.1|CV767863 FGAS062254 Triticum aestivum FGAS: L... 40 0.29
gb|CV768023.1|CV768023 FGAS062414 Triticum aestivum FGAS: L... 40 0.29
gb|CV769605.1|CV769605 FGAS063996 Triticum aestivum FGAS: L... 40 0.29
gb|DR432290.1|DR432290 441E-498 Line 441 epidermal library ... 40 0.29
gb|DR734122.1|DR734122 FGAS079878 Triticum aestivum FGAS: L... 40 0.29
gb|DR738904.1|DR738904 FGAS084121 Triticum aestivum FGAS: L... 40 0.29
emb|AX720361.1| Sequence 20 from Patent WO03014365 40 0.29
emb|AX642424.1| Sequence 80 from Patent WO02083901 40 0.29
tpg|BK000132.1| TPA: Triticum aestivum putative phytosulfok... 40 0.29
gb|AY914081.1| Triticum monococcum strain DV92 chromosome 5... 40 0.29
gb|DQ022679.1| Triticum aestivum MADS box protein VRT-2 mRN... 40 0.29
>gb|BJ254143.1|BJ254143 BJ254143 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf4j04 3', mRNA sequence
Length = 679
Score = 145 bits (73), Expect = 7e-033
Identities = 239/293 (81%), Gaps = 6/293 (2%)
Strand = Plus / Minus
Query: 522 ggcggcatccggtacacgatcacagggaaccagcactacagcgaggtgaaggtgaccaac 581
||||| ||||||||||||||||| |||||| | ||| || | |||| |||||| |||
Sbjct: 437 ggcgggatccggtacacgatcacggggaacaaatacttcaacatggtggcggtgacgaac 378
Query: 582 gtgggcggcgccggggacgtggtggcgctgtgggtgaagggcaacaagcgcgtcaagtgg 641
|||||||| || |||||||||| |||||| ||||||||| ||||||||||||||||||
Sbjct: 377 gtgggcggagcgggggacgtggcggcgctcaaggtgaaggggaacaagcgcgtcaagtgg 318
Query: 642 acgccgatgaagcgcagctggggccagctctg---gaccacggaggtcgacctcaccggc 698
||| | || |||||| |||||||||| | || |||| | ||| ||||||||||||
Sbjct: 317 acgttgttgcagcgcaactggggccaggtgtggcagacctccgag---gacctcaccggc 261
Query: 699 gagtcgctgacgttccgcgtcatgaccgccgaccaccgcaaggctacctcctggcacgtc 758
|||||||| ||||||||||||||||||| |||||| |||||| || ||||||||||||
Sbjct: 260 gagtcgctcacgttccgcgtcatgaccggcgaccatcgcaagcacacgtcctggcacgtc 201
Query: 759 acgccccgcgactggcagttcggcaaaacgtaccaggccaccaagaacttcta 811
|| || ||||||||||| || || |||||||| |||||||||||||
Sbjct: 200 ctcccgcgggactggcagtttggtgtcacctaccaggcacccaagaacttcta 148
Score = 77.8 bits (39), Expect = 1e-012
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 421 gcgagcactttgacctcaccataccggcgttcctcaagatcgccgaggagaaggccggca 480
|||||||| | ||||||||||| ||||| ||||| ||||||| ||||||||||||||||
Sbjct: 556 gcgagcacctggacctcaccatgccggccttcctgcagatcgcggaggagaaggccggca 497
Query: 481 tcgtgcccatc 491
| |||||||||
Sbjct: 496 ttgtgcccatc 486
>gb|BJ248015.1|BJ248015 BJ248015 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf4j04 5', mRNA sequence
Length = 679
Score = 101 bits (51), Expect = 9e-020
Identities = 123/147 (83%)
Strand = Plus / Plus
Query: 522 ggcggcatccggtacacgatcacagggaaccagcactacagcgaggtgaaggtgaccaac 581
||||| ||||||||||||||||| |||||| | ||| || | |||| |||||| |||
Sbjct: 525 ggcgggatccggtacacgatcacggggaacaaatacttcaacatggtggcggtgacgaac 584
Query: 582 gtgggcggcgccggggacgtggtggcgctgtgggtgaagggcaacaagcgcgtcaagtgg 641
|||||||| || |||||||||| |||||| ||||||||| ||||||||||||||||||
Sbjct: 585 gtgggcggagcgggggacgtggcggcgctcaaggtgaaggggaacaagcgcgtcaagtgg 644
Query: 642 acgccgatgaagcgcagctggggccag 668
||| | || |||||| ||||||||||
Sbjct: 645 acgttgttgcagcgcaactggggccag 671
Score = 77.8 bits (39), Expect = 1e-012
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 421 gcgagcactttgacctcaccataccggcgttcctcaagatcgccgaggagaaggccggca 480
|||||||| | ||||||||||| ||||| ||||| ||||||| ||||||||||||||||
Sbjct: 406 gcgagcacctggacctcaccatgccggccttcctgcagatcgcggaggagaaggccggca 465
Query: 481 tcgtgcccatc 491
| |||||||||
Sbjct: 466 ttgtgcccatc 476
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 239 cggcgcgtgcggctacaagg 258
||||||||||||||||||||
Sbjct: 170 cggcgcgtgcggctacaagg 189
>gb|BE427223.1|BE427223 PSR6135 ITEC PSR Wheat Pericarp/Testa Library Triticum aestivum
cDNA clone PSR6135, mRNA sequence
Length = 1173
Score = 61.9 bits (31), Expect = 8e-008
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 473 ggccggcatcgtgcccatcacctaccgcaaggtggcgtgcgagaggaaaggcggcatccg 532
||||||||| || ||| || ||||||||| |||||||||| ||| ||| |||||||||||
Sbjct: 451 ggccggcattgtccccgtctcctaccgcagggtggcgtgccagaagaagggcggcatccg 510
Query: 533 gtacacgatca 543
|| ||| ||||
Sbjct: 511 gttcaccatca 521
>gb|BE427226.1|BE427226 PSR6138 ITEC PSR Wheat Pericarp/Testa Library Triticum aestivum
cDNA clone PSR6138, mRNA sequence
Length = 1193
Score = 61.9 bits (31), Expect = 8e-008
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 473 ggccggcatcgtgcccatcacctaccgcaaggtggcgtgcgagaggaaaggcggcatccg 532
||||||||| || ||| || ||||||||| |||||||||| ||| ||| |||||||||||
Sbjct: 460 ggccggcattgtccccgtctcctaccgcagggtggcgtgccagaagaagggcggcatccg 519
Query: 533 gtacacgatca 543
|| ||| ||||
Sbjct: 520 gttcaccatca 530
>gb|BE515834.1|BE515834 WHE0606_C03_E06ZA Wheat ABA-treated embryo cDNA library Triticum
aestivum cDNA clone WHE0606_C03_E06, mRNA sequence
Length = 292
Score = 61.9 bits (31), Expect = 8e-008
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 473 ggccggcatcgtgcccatcacctaccgcaaggtggcgtgcgagaggaaaggcggcatccg 532
||||||||| || ||| || ||||||||| |||||||||| ||| ||| |||||||||||
Sbjct: 43 ggccggcattgtccccgtctcctaccgcagggtggcgtgccagaagaagggcggcatccg 102
Query: 533 gtacacgatca 543
|| ||| ||||
Sbjct: 103 gttcaccatca 113
>gb|BJ314216.1|BJ314216 BJ314216 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf9l11 5', mRNA sequence
Length = 207
Score = 61.9 bits (31), Expect = 8e-008
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 473 ggccggcatcgtgcccatcacctaccgcaaggtggcgtgcgagaggaaaggcggcatccg 532
||||||||| || ||| || ||||||||| |||||||||| ||| ||| |||||||||||
Sbjct: 35 ggccggcattgtccccgtctcctaccgcagggtggcgtgccagaagaagggcggcatccg 94
Query: 533 gtacacgatca 543
|| ||| ||||
Sbjct: 95 gttcaccatca 105
>gb|AL819700.1|AL819700 AL819700 n:129 Triticum aestivum cDNA clone F07_n129_plate_3, mRNA
sequence
Length = 611
Score = 61.9 bits (31), Expect = 8e-008
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 473 ggccggcatcgtgcccatcacctaccgcaaggtggcgtgcgagaggaaaggcggcatccg 532
||||||||| || ||| || ||||||||| |||||||||| ||| ||| |||||||||||
Sbjct: 235 ggccggcattgtccccgtctcctaccgcagggtggcgtgccagaagaagggcggcatccg 294
Query: 533 gtacacgatca 543
|| ||| ||||
Sbjct: 295 gttcaccatca 305
>gb|BQ839416.1|BQ839416 WHE4165_H03_P05ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4165_H03_P05, mRNA sequence
Length = 639
Score = 61.9 bits (31), Expect = 8e-008
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 473 ggccggcatcgtgcccatcacctaccgcaaggtggcgtgcgagaggaaaggcggcatccg 532
||||||||| || ||| || ||||||||| |||||||||| ||| ||| |||||||||||
Sbjct: 440 ggccggcattgtccccgtctcctaccgcagggtggcgtgccagaagaagggcggcatccg 499
Query: 533 gtacacgatca 543
|| ||| ||||
Sbjct: 500 gttcaccatca 510
>gb|CA499840.1|CA499840 WHE4012_C08_F16ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4012_C08_F16, mRNA sequence
Length = 511
Score = 61.9 bits (31), Expect = 8e-008
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 473 ggccggcatcgtgcccatcacctaccgcaaggtggcgtgcgagaggaaaggcggcatccg 532
||||||||| || ||| || ||||||||| |||||||||| ||| ||| |||||||||||
Sbjct: 371 ggccggcattgtccccgtctcctaccgcagggtggcgtgccagaagaagggcggcatccg 430
Query: 533 gtacacgatca 543
|| ||| ||||
Sbjct: 431 gttcaccatca 441
>gb|AJ611080.1|AJ611080 AJ611080 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 04276R, mRNA
sequence
Length = 452
Score = 61.9 bits (31), Expect = 8e-008
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 473 ggccggcatcgtgcccatcacctaccgcaaggtggcgtgcgagaggaaaggcggcatccg 532
||||||||| || ||| || ||||||||| |||||||||| ||| ||| |||||||||||
Sbjct: 155 ggccggcattgtccccgtctcctaccgcagggtggcgtgccagaagaagggcggcatccg 214
Query: 533 gtacacgatca 543
|| ||| ||||
Sbjct: 215 gttcaccatca 225
>gb|DR736988.1|DR736988 FGAS082358 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1135
Score = 58.0 bits (29), Expect = 1e-006
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 475 ccggcatcgtgcccatcacctaccgcaaggtggcgtgcgagaggaaaggcggcatccggt 534
||||||| || ||| || ||||||||| |||||||||| ||| ||| |||||||||||||
Sbjct: 861 ccggcatggtccccgtctcctaccgcagggtggcgtgccagaagaagggcggcatccggt 802
Query: 535 acacgatca 543
||| ||||
Sbjct: 801 tcaccatca 793
>gb|BE499243.1|BE499243 WHE0972_F06_K12ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0972_F06_K12, mRNA sequence
Length = 416
Score = 56.0 bits (28), Expect = 5e-006
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 473 ggccggcatcgtgcccatcacctaccgcaaggtggcgtgcgagaggaaaggcggcatccg 532
||||||||| || ||| || ||||||||| |||||||||| | | ||| |||||||||||
Sbjct: 276 ggccggcattgtccccgtctcctaccgcagggtggcgtgccanaagaagggcggcatccg 335
Query: 533 gtacacgatca 543
|| ||| ||||
Sbjct: 336 gttcaccatca 346
>gb|BM136366.1|BM136366 WHE2609_A10_A19ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2609_A10_A19,
mRNA sequence
Length = 373
Score = 54.0 bits (27), Expect = 2e-005
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 473 ggccggcatcgtgcccatcacctaccgcaaggtggcgtgcgagaggaaaggcggcatccg 532
||||||||| || ||| || ||||||||| |||||||||| | | ||| |||||||||||
Sbjct: 266 ggccggcattgtccccgtctcctaccgcagggtggcgtgccaaaagaagggcggcatccg 325
Query: 533 gtacacgatca 543
|| ||| ||||
Sbjct: 326 gttcaccatca 336
>gb|BE517456.1|BE517456 WHE0626_A11_A22ZA Wheat ABA-treated embryo cDNA library Triticum
aestivum cDNA clone WHE0626_A11_A22, mRNA sequence
Length = 505
Score = 50.1 bits (25), Expect = 3e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 572 ggtgaccaacgtgggcggcgccggggacg 600
|||||||||||||||||||||||| ||||
Sbjct: 460 ggtgaccaacgtgggcggcgccggcgacg 488
>gb|CD894504.1|CD894504 G118.126G10F010823 G118 Triticum aestivum cDNA clone G118126G10,
mRNA sequence
Length = 682
Score = 50.1 bits (25), Expect = 3e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 572 ggtgaccaacgtgggcggcgccggggacg 600
|||||||||||||||||||||||| ||||
Sbjct: 503 ggtgaccaacgtgggcggcgccggcgacg 531
Score = 44.1 bits (22), Expect = 0.019
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 474 gccggcatcgtgcccatcacctaccgcaaggtggcgtgcgagaggaaaggcggcatccgg 533
||||||||||||||| || ||||| | | |||| |||||| || ||| || |||||||||
Sbjct: 405 gccggcatcgtgcccgtctcctacagaagggtgccgtgcgtgaagaaggggggcatccgg 464
Query: 534 tacacgatca 543
| ||| ||||
Sbjct: 465 ttcaccatca 474
>gb|CD937691.1|CD937691 OV.107N15F010205 OV Triticum aestivum cDNA clone OV107N15, mRNA
sequence
Length = 716
Score = 50.1 bits (25), Expect = 3e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 572 ggtgaccaacgtgggcggcgccggggacg 600
|||||||||||||||||||||||| ||||
Sbjct: 618 ggtgaccaacgtgggcggcgccggcgacg 646
Score = 44.1 bits (22), Expect = 0.019
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 474 gccggcatcgtgcccatcacctaccgcaaggtggcgtgcgagaggaaaggcggcatccgg 533
||||||||||||||| || ||||| | | |||| |||||| || ||| || |||||||||
Sbjct: 520 gccggcatcgtgcccgtctcctacagaagggtgccgtgcgtgaagaaggggggcatccgg 579
Query: 534 tacacgatca 543
| ||| ||||
Sbjct: 580 ttcaccatca 589
>gb|CN009796.1|CN009796 WHE3862_H04_P08ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3862_H04_P08,
mRNA sequence
Length = 475
Score = 50.1 bits (25), Expect = 3e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 572 ggtgaccaacgtgggcggcgccggggacg 600
|||||||||||||||||||||||| ||||
Sbjct: 419 ggtgaccaacgtgggcggcgccggcgacg 447
Score = 44.1 bits (22), Expect = 0.019
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 474 gccggcatcgtgcccatcacctaccgcaaggtggcgtgcgagaggaaaggcggcatccgg 533
||||||||||||||| || ||||| | | |||| |||||| || ||| || |||||||||
Sbjct: 321 gccggcatcgtgcccgtctcctacagaagggtgccgtgcgtgaagaaggggggcatccgg 380
Query: 534 tacacgatca 543
| ||| ||||
Sbjct: 381 ttcaccatca 390
>gb|CV764564.1|CV764564 FGAS058949 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 798
Score = 50.1 bits (25), Expect = 3e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 572 ggtgaccaacgtgggcggcgccggggacg 600
|||||||||||||||||||||||| ||||
Sbjct: 686 ggtgaccaacgtgggcggcgccggcgacg 714
Score = 44.1 bits (22), Expect = 0.019
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 474 gccggcatcgtgcccatcacctaccgcaaggtggcgtgcgagaggaaaggcggcatccgg 533
||||||||||||||| || ||||| | | |||| |||||| || ||| || |||||||||
Sbjct: 588 gccggcatcgtgcccgtctcctacagaagggtgccgtgcgtgaagaaggggggcatccgg 647
Query: 534 tacacgatca 543
| ||| ||||
Sbjct: 648 ttcaccatca 657
>gb|CV782040.1|CV782040 FGAS076453 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 833
Score = 50.1 bits (25), Expect = 3e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 572 ggtgaccaacgtgggcggcgccggggacg 600
|||||||||||||||||||||||| ||||
Sbjct: 149 ggtgaccaacgtgggcggcgccggcgacg 177
>gb|CA698026.1|CA698026 wlk4.pk0023.g4 wlk4 Triticum aestivum cDNA clone wlk4.pk0023.g4 5'
end, mRNA sequence
Length = 627
Score = 48.1 bits (24), Expect = 0.001
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 108 gaggaggaggaggacggcggcggc 131
||||||||||||||||||||||||
Sbjct: 81 gaggaggaggaggacggcggcggc 58
>gb|CA707014.1|CA707014 wdk2c.pk0003.b6 wdk2c Triticum aestivum cDNA clone wdk2c.pk0003.b6
5' end, mRNA sequence
Length = 448
Score = 48.1 bits (24), Expect = 0.001
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 108 gaggaggaggaggacggcggcggc 131
||||||||||||||||||||||||
Sbjct: 80 gaggaggaggaggacggcggcggc 57
>gb|CA730445.1|CA730445 wip1c.pk004.b18 wip1c Triticum aestivum cDNA clone wip1c.pk004.b18
5' end, mRNA sequence
Length = 604
Score = 48.1 bits (24), Expect = 0.001
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 474 gccggcatcgtgcccatcacctaccgcaaggtggcgtgcgagaggaaaggcggcatccgg 533
||||||||||||||| || ||||| | |||| |||||| || |||||| |||||||||
Sbjct: 521 gccggcatcgtgcccgtctcctacagannggtgccgtgcgtgaagaaagggggcatccgg 580
Query: 534 tacacgatca 543
| ||| ||||
Sbjct: 581 ttcaccatca 590
>gb|CD873520.1|CD873520 AZO3.100B01F010925 AZO3 Triticum aestivum cDNA clone AZO3100B01,
mRNA sequence
Length = 632
Score = 48.1 bits (24), Expect = 0.001
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 108 gaggaggaggaggacggcggcggc 131
||||||||||||||||||||||||
Sbjct: 104 gaggaggaggaggacggcggcggc 81
>gb|CD873521.1|CD873521 AZO3.100B01F011011 AZO3 Triticum aestivum cDNA clone AZO3100B01,
mRNA sequence
Length = 643
Score = 48.1 bits (24), Expect = 0.001
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 108 gaggaggaggaggacggcggcggc 131
||||||||||||||||||||||||
Sbjct: 105 gaggaggaggaggacggcggcggc 82
>gb|CD899117.1|CD899117 G174.111C22F010827 G174 Triticum aestivum cDNA clone G174111C22,
mRNA sequence
Length = 459
Score = 48.1 bits (24), Expect = 0.001
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 108 gaggaggaggaggacggcggcggc 131
||||||||||||||||||||||||
Sbjct: 107 gaggaggaggaggacggcggcggc 84
>gb|CK162230.1|CK162230 FGAS014818 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1126
Score = 48.1 bits (24), Expect = 0.001
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 108 gaggaggaggaggacggcggcggc 131
||||||||||||||||||||||||
Sbjct: 108 gaggaggaggaggacggcggcggc 85
>gb|CK193405.1|CK193405 FGAS001819 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 818
Score = 48.1 bits (24), Expect = 0.001
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 108 gaggaggaggaggacggcggcggc 131
||||||||||||||||||||||||
Sbjct: 206 gaggaggaggaggacggcggcggc 183
>gb|CV765677.1|CV765677 FGAS060064 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 826
Score = 48.1 bits (24), Expect = 0.001
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 473 ggccggcatcgtgcccatcacctaccg-caaggtggcgtgcgagaggaaaggcggcatcc 531
||||||||| || ||| || ||||||| || |||||||||| ||| ||| ||||||||||
Sbjct: 642 ggccggcattgtccccgtctcctaccggcagggtggcgtgccagaagaagggcggcatcc 701
Query: 532 ggtacacgatca 543
||| ||| ||||
Sbjct: 702 ggttcaccatca 713
>gb|CV773972.1|CV773972 FGAS068369 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 822
Score = 48.1 bits (24), Expect = 0.001
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 108 gaggaggaggaggacggcggcggc 131
||||||||||||||||||||||||
Sbjct: 204 gaggaggaggaggacggcggcggc 181
>gb|CV778740.1|CV778740 FGAS073149 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 824
Score = 48.1 bits (24), Expect = 0.001
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 108 gaggaggaggaggacggcggcggc 131
||||||||||||||||||||||||
Sbjct: 203 gaggaggaggaggacggcggcggc 180
>gb|CV778767.1|CV778767 FGAS073176 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 898
Score = 48.1 bits (24), Expect = 0.001
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 108 gaggaggaggaggacggcggcggc 131
||||||||||||||||||||||||
Sbjct: 202 gaggaggaggaggacggcggcggc 179
>gb|DR735788.1|DR735788 FGAS081422 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1082
Score = 48.1 bits (24), Expect = 0.001
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 108 gaggaggaggaggacggcggcggc 131
||||||||||||||||||||||||
Sbjct: 116 gaggaggaggaggacggcggcggc 93
>gb|BJ214280.1|BJ214280 BJ214280 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh26k17 5', mRNA sequence
Length = 599
Score = 46.1 bits (23), Expect = 0.005
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 572 ggtgaccaacgtgggcggcgccggggacgtg 602
|||||||||||||| ||||||||| ||||||
Sbjct: 47 ggtgaccaacgtggccggcgccggcgacgtg 77
>gb|BJ221768.1|BJ221768 BJ221768 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh26k17 3', mRNA sequence
Length = 611
Score = 46.1 bits (23), Expect = 0.005
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 572 ggtgaccaacgtgggcggcgccggggacgtg 602
|||||||||||||| ||||||||| ||||||
Sbjct: 565 ggtgaccaacgtggccggcgccggcgacgtg 535
>gb|BJ280310.1|BJ280310 BJ280310 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr7i04 5', mRNA sequence
Length = 516
Score = 46.1 bits (23), Expect = 0.005
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 572 ggtgaccaacgtgggcggcgccggggacgtg 602
|||||||||||||| ||||||||| ||||||
Sbjct: 132 ggtgaccaacgtggccggcgccggcgacgtg 162
>gb|BJ285296.1|BJ285296 BJ285296 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr7i04 3', mRNA sequence
Length = 658
Score = 46.1 bits (23), Expect = 0.005
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 572 ggtgaccaacgtgggcggcgccggggacgtg 602
|||||||||||||| ||||||||| ||||||
Sbjct: 613 ggtgaccaacgtggccggcgccggcgacgtg 583
>gb|BJ285550.1|BJ285550 BJ285550 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr8m22 3', mRNA sequence
Length = 650
Score = 46.1 bits (23), Expect = 0.005
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 572 ggtgaccaacgtgggcggcgccggggacgtg 602
|||||||||||||| ||||||||| ||||||
Sbjct: 572 ggtgaccaacgtggccggcgccggcgacgtg 542
>gb|BJ302105.1|BJ302105 BJ302105 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd13k07 5', mRNA sequence
Length = 611
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 107 cgaggaggaggaggacggcggcg 129
|||||||||||||||||||||||
Sbjct: 57 cgaggaggaggaggacggcggcg 35
>gb|BQ240271.1|BQ240271 TaE05019G08R TaE05 Triticum aestivum cDNA clone TaE05019G08R, mRNA
sequence
Length = 645
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 107 cgaggaggaggaggacggcggcg 129
|||||||||||||||||||||||
Sbjct: 142 cgaggaggaggaggacggcggcg 120
>gb|BQ608900.1|BQ608900 BRY_4816 wheat EST endosperm library Triticum aestivum cDNA 5',
mRNA sequence
Length = 668
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 107 cgaggaggaggaggacggcggcg 129
|||||||||||||||||||||||
Sbjct: 55 cgaggaggaggaggacggcggcg 33
>gb|BQ839374.1|BQ839374 WHE4165_D06_H11ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4165_D06_H11, mRNA sequence
Length = 631
Score = 46.1 bits (23), Expect = 0.005
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 572 ggtgaccaacgtgggcggcgccggggacgtg 602
|||||||||||||| ||||||||| ||||||
Sbjct: 416 ggtgaccaacgtggccggcgccggcgacgtg 446
>gb|CA714338.1|CA714338 wdk3c.pk018.l12 wdk3c Triticum aestivum cDNA clone wdk3c.pk018.l12
5' end, mRNA sequence
Length = 439
Score = 46.1 bits (23), Expect = 0.005
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 572 ggtgaccaacgtgggcggcgccggggacgtg 602
|||||||||||||| ||||||||| ||||||
Sbjct: 28 ggtgaccaacgtggccggcgccggcgacgtg 58
>gb|CD454188.1|CD454188 WHE0990_H02_P04ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0990_H02_P04, mRNA sequence
Length = 738
Score = 46.1 bits (23), Expect = 0.005
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 572 ggtgaccaacgtgggcggcgccggggacgtg 602
|||||||||||||| ||||||||| ||||||
Sbjct: 664 ggtgaccaacgtggccggcgccggcgacgtg 634
>gb|CD862203.1|CD862203 AZO1.102M08F010126 AZO1 Triticum aestivum cDNA clone AZO1102M08,
mRNA sequence
Length = 696
Score = 46.1 bits (23), Expect = 0.005
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 572 ggtgaccaacgtgggcggcgccggggacgtg 602
|||||||||||||| ||||||||| ||||||
Sbjct: 604 ggtgaccaacgtggccggcgccggcgacgtg 634
>gb|CK196683.1|CK196683 FGAS005143 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 815
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 107 cgaggaggaggaggacggcggcg 129
|||||||||||||||||||||||
Sbjct: 205 cgaggaggaggaggacggcggcg 183
>gb|CK209163.1|CK209163 FGAS020911 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1156
Score = 46.1 bits (23), Expect = 0.005
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 473 ggccggcatcgtgcccatcacctaccgcaaggtggcgtgcgagaggaaaggcggcatccg 532
||||||||| || ||| || ||||||||| |||||||||| | | || |||||||||||
Sbjct: 712 ggccggcattgtccccgtctcctaccgcagggtggcgtgccaaaaaaagggcggcatccg 771
Query: 533 gtacacgatca 543
|| ||| ||||
Sbjct: 772 gttcaccatca 782
>gb|CK210097.1|CK210097 FGAS021888 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1051
Score = 46.1 bits (23), Expect = 0.005
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 572 ggtgaccaacgtgggcggcgccggggacgtg 602
|||||||||||||| ||||||||| ||||||
Sbjct: 613 ggtgaccaacgtggccggcgccggcgacgtg 643
>gb|CV774820.1|CV774820 FGAS069220 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 816
Score = 46.1 bits (23), Expect = 0.005
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 473 ggccggcatcgtgcccatcacctaccgcaaggtggcgtgcgagaggaaaggcggcatccg 532
||||||||| || ||| || ||||||||| | |||||||| | | ||| |||||||||||
Sbjct: 642 ggccggcattgtccccgtctcctaccgcaggntggcgtgccaaaagaagggcggcatccg 701
Query: 533 gt 534
||
Sbjct: 702 gt 703
>gb|DR737942.1|DR737942 FGAS083159 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1109
Score = 46.1 bits (23), Expect = 0.005
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 572 ggtgaccaacgtgggcggcgccggggacgtg 602
|||||||||||||| ||||||||| ||||||
Sbjct: 629 ggtgaccaacgtggccggcgccggcgacgtg 659
>gb|DR739882.1|DR739882 FGAS000149 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1124
Score = 46.1 bits (23), Expect = 0.005
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 572 ggtgaccaacgtgggcggcgccggggacgtg 602
|||||||||||||| ||||||||| ||||||
Sbjct: 623 ggtgaccaacgtggccggcgccggcgacgtg 653
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 373,815
Number of Sequences: 636343
Number of extensions: 373815
Number of successful extensions: 127453
Number of sequences better than 0.5: 125
Number of HSP's better than 0.5 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 127126
Number of HSP's gapped (non-prelim): 326
length of query: 1019
length of database: 367,240,239
effective HSP length: 20
effective length of query: 999
effective length of database: 354,513,379
effective search space: 354158865621
effective search space used: 354158865621
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)