BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3184927.2.1
(1157 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA727482.1|CA727482 wdi1c.pk001.g10 wdi1c Triticum aesti... 161 1e-037
gb|BE499826.1|BE499826 WHE0979_G07_M13ZS Wheat pre-anthesis... 155 8e-036
gb|BJ211851.1|BJ211851 BJ211851 Y. Ogihara unpublished cDNA... 153 3e-035
gb|BJ207600.1|BJ207600 BJ207600 Y. Ogihara unpublished cDNA... 147 2e-033
gb|BJ213966.1|BJ213966 BJ213966 Y. Ogihara unpublished cDNA... 139 5e-031
gb|BJ211296.1|BJ211296 BJ211296 Y. Ogihara unpublished cDNA... 131 1e-028
emb|CS059620.1| Sequence 9 from Patent WO2005026368 131 1e-028
emb|CS059624.1| Sequence 13 from Patent WO2005026368 131 1e-028
gb|BF483517.1|BF483517 WHE2334_G10_M20ZS Wheat pre-anthesis... 129 5e-028
gb|BJ213500.1|BJ213500 BJ213500 Y. Ogihara unpublished cDNA... 127 2e-027
gb|BJ211483.1|BJ211483 BJ211483 Y. Ogihara unpublished cDNA... 125 7e-027
gb|BJ210747.1|BJ210747 BJ210747 Y. Ogihara unpublished cDNA... 125 7e-027
gb|BJ212019.1|BJ212019 BJ212019 Y. Ogihara unpublished cDNA... 123 3e-026
gb|BJ207654.1|BJ207654 BJ207654 Y. Ogihara unpublished cDNA... 121 1e-025
gb|BJ211640.1|BJ211640 BJ211640 Y. Ogihara unpublished cDNA... 119 4e-025
gb|BJ209016.1|BJ209016 BJ209016 Y. Ogihara unpublished cDNA... 103 3e-020
gb|BJ218476.1|BJ218476 BJ218476 Y. Ogihara unpublished cDNA... 101 1e-019
gb|BJ219300.1|BJ219300 BJ219300 Y. Ogihara unpublished cDNA... 101 1e-019
gb|CD454149.1|CD454149 WHE0979_G07_M13ZT CS wheat pre-anthe... 101 1e-019
gb|BJ207234.1|BJ207234 BJ207234 Y. Ogihara unpublished cDNA... 100 4e-019
gb|BJ214514.1|BJ214514 BJ214514 Y. Ogihara unpublished cDNA... 100 4e-019
gb|BJ216548.1|BJ216548 BJ216548 Y. Ogihara unpublished cDNA... 100 4e-019
gb|BJ219323.1|BJ219323 BJ219323 Y. Ogihara unpublished cDNA... 100 4e-019
gb|CK208266.1|CK208266 FGAS019965 Triticum aestivum FGAS: L... 100 4e-019
gb|BJ219109.1|BJ219109 BJ219109 Y. Ogihara unpublished cDNA... 98 2e-018
gb|BJ218921.1|BJ218921 BJ218921 Y. Ogihara unpublished cDNA... 96 7e-018
gb|BJ216410.1|BJ216410 BJ216410 Y. Ogihara unpublished cDNA... 92 1e-016
gb|BJ211871.1|BJ211871 BJ211871 Y. Ogihara unpublished cDNA... 92 1e-016
gb|BJ214395.1|BJ214395 BJ214395 Y. Ogihara unpublished cDNA... 92 1e-016
gb|BJ214937.1|BJ214937 BJ214937 Y. Ogihara unpublished cDNA... 92 1e-016
gb|BJ218000.1|BJ218000 BJ218000 Y. Ogihara unpublished cDNA... 92 1e-016
gb|BJ218731.1|BJ218731 BJ218731 Y. Ogihara unpublished cDNA... 92 1e-016
gb|BJ219467.1|BJ219467 BJ219467 Y. Ogihara unpublished cDNA... 92 1e-016
gb|BJ221002.1|BJ221002 BJ221002 Y. Ogihara unpublished cDNA... 92 1e-016
gb|BF483715.1|BF483715 WHE2336_H12_P24ZS Wheat pre-anthesis... 90 4e-016
gb|BJ207113.1|BJ207113 BJ207113 Y. Ogihara unpublished cDNA... 90 4e-016
gb|BJ221444.1|BJ221444 BJ221444 Y. Ogihara unpublished cDNA... 84 2e-014
gb|BJ220870.1|BJ220870 BJ220870 Y. Ogihara unpublished cDNA... 82 1e-013
gb|BJ209131.1|BJ209131 BJ209131 Y. Ogihara unpublished cDNA... 78 2e-012
gb|BJ214885.1|BJ214885 BJ214885 Y. Ogihara unpublished cDNA... 64 2e-008
gb|BJ213371.1|BJ213371 BJ213371 Y. Ogihara unpublished cDNA... 52 9e-005
gb|BJ262590.1|BJ262590 BJ262590 Y. Ogihara unpublished cDNA... 40 0.33
gb|AY772733.1| Triticum aestivum clone BAC TA1426L2, *** SE... 40 0.33
>gb|CA727482.1|CA727482 wdi1c.pk001.g10 wdi1c Triticum aestivum cDNA clone wdi1c.pk001.g10 5'
end, mRNA sequence
Length = 595
Score = 161 bits (81), Expect = 1e-037
Identities = 315/393 (80%)
Strand = Plus / Minus
Query: 748 atcctcaccgcagacgacgaagacgtaaggacgacccttttcaggaacgggttcttcttg 807
||||||||||| ||||| ||||| || || || |||||||| || ||||| ||||||||
Sbjct: 410 atcctcaccgcggacgatgaagatgtgagaacaacccttttgagaaacggactcttcttg 351
Query: 808 cacgatctcagcacgttcagagtaccgttcaccgcagggacgagcgtgtcctccttgcta 867
||||| || |||||||| || ||||| || | ||||| | || || | ||||||| |
Sbjct: 350 cacgaccttagcacgtttagggtaccattaattgcaggaccaagtgttgcttccttgcaa 291
Query: 868 gtagagtcgggtttagcgaggacgggggatgcagtgtggaatacaccctcacaggccatc 927
| ||||||| ||| ||||||| || ||||| ||||||| || |||||||| ||||||
Sbjct: 290 ttggagtcggatttcccgaggacaggcgatgcgatgtggaagacgccctcacaagccatc 231
Query: 928 acggcgctgtcgaagctcccttcttccaacagatcagctcgcacgatttgcagcctctct 987
|| || ||| ||||||||||| ||||| | |||||||| ||| | ||| ||||||||
Sbjct: 230 acagcatcgtcaaagctcccttcctccaataaatcagctctcacaagttggagcctctca 171
Query: 988 ttagcgccaggtaatttccaaaggtgggctgtcttttggtgatttcctgggtccctgaca 1047
|| || ||||| | |||||||||||| | |||| |||| |||||||| |||||
Sbjct: 170 tttgcaccaggcagtttccaaaggtgtcccactttttttcgattccctgggtctctgact 111
Query: 1048 gtccctaccacatgatatccagactcgaggagccgtttgataagccaagaggcaacaaag 1107
||||||| ||||||||||||| ||||||| |||| |||||| ||||||||||| | ||||
Sbjct: 110 gtccctatcacatgatatccacactcgagaagccttttgatgagccaagaggcgagaaag 51
Query: 1108 cctgaggccccggttacgcataccttgcccttg 1140
||||||||||| ||||| || || |||||||||
Sbjct: 50 cctgaggccccagttacacacactttgcccttg 18
>gb|BE499826.1|BE499826 WHE0979_G07_M13ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0979_G07_M13, mRNA sequence
Length = 564
Score = 155 bits (78), Expect = 8e-036
Identities = 309/386 (80%)
Strand = Plus / Minus
Query: 739 tcgtccctgatcctcaccgcagacgacgaagacgtaaggacgacccttttcaggaacggg 798
|||||||| |||||||| |||||||| ||||| || || || |||| ||| || |||||
Sbjct: 390 tcgtccctaatcctcactgcagacgatgaagatgtgagaacaacccgttttagaaacgga 331
Query: 799 ttcttcttgcacgatctcagcacgttcagagtaccgttcaccgcagggacgagcgtgtcc 858
||||||||||||| || |||||||| || || || || | ||||| | || || |
Sbjct: 330 ctcttcttgcacgaccttagcacgtttagggtgccattaattgcaggaccaagtgttgct 271
Query: 859 tccttgctagtagagtcgggtttagcgaggacgggggatgcagtgtggaatacaccctca 918
||||||| | | ||||| | ||| ||||||| || |||||| ||||||| |||||||||
Sbjct: 270 tccttgcaattggagtcagatttcccgaggacaggtgatgcaatgtggaagacaccctca 211
Query: 919 caggccatcacggcgctgtcgaagctcccttcttccaacagatcagctcgcacgatttgc 978
|| |||||||| || || ||||||||||| ||||| | |||||||| ||| | |||
Sbjct: 210 caagccatcacagcatcatcaaagctcccttcctccaataaatcagctctcacaagttgg 151
Query: 979 agcctctctttagcgccaggtaatttccaaaggtgggctgtcttttggtgatttcctggg 1038
|||||||| || || |||||||||||||||||||| | |||| |||| ||||||
Sbjct: 150 agcctctcatttgcaccaggtaatttccaaaggtgtccaacttttttccgattccctggg 91
Query: 1039 tccctgacagtccctaccacatgatatccagactcgaggagccgtttgataagccaagag 1098
|| ||||| ||||||| ||||||||||||| |||| || || | |||||| |||||||||
Sbjct: 90 tctctgactgtccctatcacatgatatccacactcaagaagtcttttgatgagccaagag 31
Query: 1099 gcaacaaagcctgaggccccggttac 1124
|| | |||||||||||||||||||||
Sbjct: 30 gcgagaaagcctgaggccccggttac 5
Score = 85.7 bits (43), Expect = 6e-015
Identities = 118/143 (82%)
Strand = Plus / Minus
Query: 565 atcacgaacgacgggaggacagtcacaaggtcgatgccgttctccttggcgaactcccac 624
|||||||| || || || ||||| |||||||| ||| || |||||||| || ||| |
Sbjct: 561 atcacgaatgaaggaagaacagtgacaaggtcaatgttattttccttggcaaagtccaat 502
Query: 625 gccgctttctctgcaaataccttggctagggcataccatagatgcatcttctcgcagagt 684
|| |||||||||||||||||||| || |||||||||||||| || | ||| |||||||||
Sbjct: 501 gctgctttctctgcaaatacctttgccagggcataccatagctgtagcttttcgcagagt 442
Query: 685 ggcacggagctccatgtcgtttc 707
||||| ||||||| || |||||
Sbjct: 441 ggcacacagctccacgttgtttc 419
>gb|BJ211851.1|BJ211851 BJ211851 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh33j11 5', mRNA sequence
Length = 685
Score = 153 bits (77), Expect = 3e-035
Identities = 212/257 (82%)
Strand = Plus / Minus
Query: 884 cgaggacgggggatgcagtgtggaatacaccctcacaggccatcacggcgctgtcgaagc 943
||||||| || |||||| ||||||| ||||||||||| |||||||| || || ||||
Sbjct: 660 cgaggacaggtgatgcaatgtggaagacaccctcacaagccatcacagcatcatcaaagc 601
Query: 944 tcccttcttccaacagatcagctcgcacgatttgcagcctctctttagcgccaggtaatt 1003
||||||| ||||| | |||||||| ||| | ||| |||||||| || || ||||||||||
Sbjct: 600 tcccttcctccaataaatcagctctcacaagttggagcctctcatttgcaccaggtaatt 541
Query: 1004 tccaaaggtgggctgtcttttggtgatttcctgggtccctgacagtccctaccacatgat 1063
|||||||||| | |||| |||| |||||||| ||||| ||||||| ||||||||
Sbjct: 540 tccaaaggtgtccaacttttttccgattccctgggtctctgactgtccctatcacatgat 481
Query: 1064 atccagactcgaggagccgtttgataagccaagaggcaacaaagcctgaggccccggtta 1123
||||| |||| || || | |||||| ||||||||||| | ||||||||||||||||||||
Sbjct: 480 atccacactcaagaagtcttttgatgagccaagaggcgagaaagcctgaggccccggtta 421
Query: 1124 cgcataccttgcccttg 1140
| || || |||||||||
Sbjct: 420 cacacactttgcccttg 404
>gb|BJ207600.1|BJ207600 BJ207600 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh4i14 5', mRNA sequence
Length = 557
Score = 147 bits (74), Expect = 2e-033
Identities = 203/246 (82%)
Strand = Plus / Minus
Query: 895 gatgcagtgtggaatacaccctcacaggccatcacggcgctgtcgaagctcccttcttcc 954
|||||||||||||| | ||||| |||||||||||||| |||||||||||||||||||
Sbjct: 258 gatgcagtgtggaagatgccctcgcaggccatcacggcatcgtcgaagctcccttcttcc 199
Query: 955 aacagatcagctcgcacgatttgcagcctctctttagcgccaggtaatttccaaaggtgg 1014
|| || ||||| | ||||| | ||||||||| ||||| || | ||| ||||| |||||
Sbjct: 198 aagaggtcagccctcacgagctccagcctctccttagcacctgctaagttccacaggtgt 139
Query: 1015 gctgtcttttggtgatttcctgggtccctgacagtccctaccacatgatatccagactcg 1074
||| ||| | ||||| |||||||| ||||| ||||||| |||||||| || ||||||
Sbjct: 138 gctaccttcttctgattgcctgggtctctgactgtccctagaacatgataccctgactcg 79
Query: 1075 aggagccgtttgataagccaagaggcaacaaagcctgaggccccggttacgcataccttg 1134
|| || || |||| ||||||||||||||||||||| ||||| || || || || ||||||
Sbjct: 78 agaagtcgcttgacaagccaagaggcaacaaagccagaggctccagtgacacacaccttg 19
Query: 1135 cccttg 1140
||||||
Sbjct: 18 cccttg 13
Score = 89.7 bits (45), Expect = 4e-016
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 760 gacgacgaagacgtaaggacgacccttttcaggaacgggttcttcttgcacgatctcagc 819
|||||||| ||||| ||||| |||||||| || || |||||||||||||| |||||||||
Sbjct: 387 gacgacgacgacgtgaggacaacccttttgagaaatgggttcttcttgcaggatctcagc 328
Query: 820 acgttcagagtaccgtt 836
||||||||||| |||||
Sbjct: 327 acgttcagagtgccgtt 311
>gb|BJ213966.1|BJ213966 BJ213966 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh25d08 5', mRNA sequence
Length = 546
Score = 139 bits (70), Expect = 5e-031
Identities = 199/242 (82%)
Strand = Plus / Minus
Query: 895 gatgcagtgtggaatacaccctcacaggccatcacggcgctgtcgaagctcccttcttcc 954
|||||||||||||| | ||||| |||||||||||||| |||||||||||||||||||
Sbjct: 242 gatgcagtgtggaagatgccctcgcaggccatcacggcatcgtcgaagctcccttcttcc 183
Query: 955 aacagatcagctcgcacgatttgcagcctctctttagcgccaggtaatttccaaaggtgg 1014
|| || ||||| | ||||| | ||||||||| ||||| || | ||| ||||| |||||
Sbjct: 182 aagaggtcagccctcacgagctccagcctctccttagcacctgctaagttccacaggtgt 123
Query: 1015 gctgtcttttggtgatttcctgggtccctgacagtccctaccacatgatatccagactcg 1074
||| ||| | ||||| |||||||| ||||| ||||||| |||||||| || ||||||
Sbjct: 122 gctaccttcttctgattgcctgggtctctgactgtccctagaacatgataccctgactcg 63
Query: 1075 aggagccgtttgataagccaagaggcaacaaagcctgaggccccggttacgcataccttg 1134
|| || || |||| ||||||||||||||||||||| ||||| || || || || ||||||
Sbjct: 62 agaagtcgcttgacaagccaagaggcaacaaagccagaggctccagtgacacacaccttg 3
Query: 1135 cc 1136
||
Sbjct: 2 cc 1
Score = 89.7 bits (45), Expect = 4e-016
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 760 gacgacgaagacgtaaggacgacccttttcaggaacgggttcttcttgcacgatctcagc 819
|||||||| ||||| ||||| |||||||| || || |||||||||||||| |||||||||
Sbjct: 371 gacgacgacgacgtgaggacaacccttttgagaaatgggttcttcttgcaggatctcagc 312
Query: 820 acgttcagagtaccgtt 836
||||||||||| |||||
Sbjct: 311 acgttcagagtgccgtt 295
>gb|BJ211296.1|BJ211296 BJ211296 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh30a10 5', mRNA sequence
Length = 487
Score = 131 bits (66), Expect = 1e-028
Identities = 201/246 (81%)
Strand = Plus / Minus
Query: 895 gatgcagtgtggaatacaccctcacaggccatcacggcgctgtcgaagctcccttcttcc 954
||||| |||||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 267 gatgcggtgtggaagacgccctcacaggccatcacggcatcgtcgaagctcccttcttcc 208
Query: 955 aacagatcagctcgcacgatttgcagcctctctttagcgccaggtaatttccaaaggtgg 1014
|| || ||||| | || | | ||||| ||| ||||| || | ||| ||||| |||||
Sbjct: 207 aagaggtcagccctgacaagctccagcccctccttagcacctgctaagttccagaggtgt 148
Query: 1015 gctgtcttttggtgatttcctgggtccctgacagtccctaccacatgatatccagactcg 1074
||| ||| | ||||| |||||||| ||||| ||||||| |||||||| || ||||||
Sbjct: 147 gctaccttcttctgattgcctgggtctctgactgtccctagaacatgataacctgactcg 88
Query: 1075 aggagccgtttgataagccaagaggcaacaaagcctgaggccccggttacgcataccttg 1134
|| || || |||| ||||||||||||||||||||| ||||| || || || || ||||||
Sbjct: 87 agaagtcgcttgacaagccaagaggcaacaaagccagaggctccagtgacacacaccttg 28
Query: 1135 cccttg 1140
||||||
Sbjct: 27 cccttg 22
Score = 89.7 bits (45), Expect = 4e-016
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 760 gacgacgaagacgtaaggacgacccttttcaggaacgggttcttcttgcacgatctcagc 819
|||||||||||||| ||||| |||||||| ||||| || ||||||||||| |||||||||
Sbjct: 396 gacgacgaagacgtgaggacaacccttttgaggaatggattcttcttgcaggatctcagc 337
Query: 820 acgttcagagtaccgtt 836
||||| ||||| |||||
Sbjct: 336 acgtttagagtgccgtt 320
>emb|CS059620.1| Sequence 9 from Patent WO2005026368
Length = 546
Score = 131 bits (66), Expect = 1e-028
Identities = 201/246 (81%)
Strand = Plus / Minus
Query: 895 gatgcagtgtggaatacaccctcacaggccatcacggcgctgtcgaagctcccttcttcc 954
||||| |||||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 274 gatgcggtgtggaagacgccctcacaggccatcacggcatcgtcgaagctcccttcttcc 215
Query: 955 aacagatcagctcgcacgatttgcagcctctctttagcgccaggtaatttccaaaggtgg 1014
|| || ||||| | || | | ||||| ||| ||||| || | ||| ||||| |||||
Sbjct: 214 aagaggtcagccctgacaagctccagcccctccttagcacctgctaagttccagaggtgt 155
Query: 1015 gctgtcttttggtgatttcctgggtccctgacagtccctaccacatgatatccagactcg 1074
||| ||| | ||||| |||||||| ||||| ||||||| |||||||| || ||||||
Sbjct: 154 gctaccttcttctgattgcctgggtctctgactgtccctagaacatgataacctgactcg 95
Query: 1075 aggagccgtttgataagccaagaggcaacaaagcctgaggccccggttacgcataccttg 1134
|| || || |||| ||||||||||||||||||||| ||||| || || || || ||||||
Sbjct: 94 agaagtcgcttgacaagccaagaggcaacaaagccagaggctccagtgacacacaccttg 35
Query: 1135 cccttg 1140
||||||
Sbjct: 34 cccttg 29
Score = 89.7 bits (45), Expect = 4e-016
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 760 gacgacgaagacgtaaggacgacccttttcaggaacgggttcttcttgcacgatctcagc 819
|||||||||||||| ||||| |||||||| ||||| || ||||||||||| |||||||||
Sbjct: 403 gacgacgaagacgtgaggacaacccttttgaggaatggattcttcttgcaggatctcagc 344
Query: 820 acgttcagagtaccgtt 836
||||| ||||| |||||
Sbjct: 343 acgtttagagtgccgtt 327
>emb|CS059624.1| Sequence 13 from Patent WO2005026368
Length = 1222
Score = 131 bits (66), Expect = 1e-028
Identities = 201/246 (81%)
Strand = Plus / Minus
Query: 895 gatgcagtgtggaatacaccctcacaggccatcacggcgctgtcgaagctcccttcttcc 954
||||| |||||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 274 gatgcggtgtggaagacgccctcacaggccatcacggcatcgtcgaagctcccttcttcc 215
Query: 955 aacagatcagctcgcacgatttgcagcctctctttagcgccaggtaatttccaaaggtgg 1014
|| || ||||| | || | | ||||| ||| ||||| || | ||| ||||| |||||
Sbjct: 214 aagaggtcagccctgacaagctccagcccctccttagcacctgctaagttccagaggtgt 155
Query: 1015 gctgtcttttggtgatttcctgggtccctgacagtccctaccacatgatatccagactcg 1074
||| ||| | ||||| |||||||| ||||| ||||||| |||||||| || ||||||
Sbjct: 154 gctaccttcttctgattgcctgggtctctgactgtccctagaacatgataacctgactcg 95
Query: 1075 aggagccgtttgataagccaagaggcaacaaagcctgaggccccggttacgcataccttg 1134
|| || || |||| ||||||||||||||||||||| ||||| || || || || ||||||
Sbjct: 94 agaagtcgcttgacaagccaagaggcaacaaagccagaggctccagtgacacacaccttg 35
Query: 1135 cccttg 1140
||||||
Sbjct: 34 cccttg 29
Score = 91.7 bits (46), Expect = 1e-016
Identities = 112/134 (83%)
Strand = Plus / Minus
Query: 337 cgtttcgcgagcgaggagaccagctcgtcgttgtccagcaccactgagctgcacaggtac 396
|||||||||||| ||| ||||||||||| | | ||||| ||| | ||| |||| | ||||
Sbjct: 826 cgtttcgcgagcaaggcgaccagctcgttgctatccagaaccgccgagttgcagatgtac 767
Query: 397 ctcccggcggcctggggggcctcgtacaccaggatgtggctgctcgcaacgtcgtcgatg 456
||||| ||| | || || ||||| ||||||||||||| |||||| ||||||||||||
Sbjct: 766 ctccccttggcgtcggcggtttcgtagaccaggatgtggcagctcgcgacgtcgtcgatg 707
Query: 457 tggacgtaccccat 470
||||||||||||||
Sbjct: 706 tggacgtaccccat 693
Score = 89.7 bits (45), Expect = 4e-016
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 760 gacgacgaagacgtaaggacgacccttttcaggaacgggttcttcttgcacgatctcagc 819
|||||||||||||| ||||| |||||||| ||||| || ||||||||||| |||||||||
Sbjct: 403 gacgacgaagacgtgaggacaacccttttgaggaatggattcttcttgcaggatctcagc 344
Query: 820 acgttcagagtaccgtt 836
||||| ||||| |||||
Sbjct: 343 acgtttagagtgccgtt 327
Score = 50.1 bits (25), Expect = 3e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 209 agtcgtcgaacatctcctgcacccctctgaact 241
|||||||||||||||||| ||| ||||||||||
Sbjct: 954 agtcgtcgaacatctcctccacgcctctgaact 922
Score = 48.1 bits (24), Expect = 0.001
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 592 aggtcgatgccgttctccttggcgaactccca 623
||||||||| |||||||||||||||||||||
Sbjct: 571 aggtcgatgttgttctccttggcgaactccca 540
>gb|BF483517.1|BF483517 WHE2334_G10_M20ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2334_G10_M20, mRNA sequence
Length = 590
Score = 129 bits (65), Expect = 5e-028
Identities = 182/221 (82%)
Strand = Plus / Minus
Query: 895 gatgcagtgtggaatacaccctcacaggccatcacggcgctgtcgaagctcccttcttcc 954
|||||||||||||| || ||||| ||||||||||| || |||||||||||||||||||
Sbjct: 244 gatgcagtgtggaagacgccctcgcaggccatcacagcatcgtcgaagctcccttcttcc 185
Query: 955 aacagatcagctcgcacgatttgcagcctctctttagcgccaggtaatttccaaaggtgg 1014
|| || ||||| | ||||| | ||||||||| ||||| || | ||| ||||| |||||
Sbjct: 184 aagaggtcagccctcacgagctccagcctctccttagcacctgctaagttccagaggtgt 125
Query: 1015 gctgtcttttggtgatttcctgggtccctgacagtccctaccacatgatatccagactcg 1074
||| ||| | ||||| |||||||| ||||| ||||||| |||||||| || |||||
Sbjct: 124 gctaccttcttctgattgcctgggtctctgactgtccctagaacatgataccctgactca 65
Query: 1075 aggagccgtttgataagccaagaggcaacaaagcctgaggc 1115
|| || || |||| ||||||||||||||||||||| |||||
Sbjct: 64 agaagtcgcttgacaagccaagaggcaacaaagccagaggc 24
Score = 73.8 bits (37), Expect = 2e-011
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 760 gacgacgaagacgtaaggacgacccttttcaggaacgggttcttcttgcacgatctcagc 819
||||| || ||||| ||||| |||||||| || || |||||||||||||| |||||||||
Sbjct: 373 gacgatgacgacgtgaggacaacccttttgagaaatgggttcttcttgcaggatctcagc 314
Query: 820 acgttcagagtaccgtt 836
||||| ||||| |||||
Sbjct: 313 acgtttagagtgccgtt 297
Score = 52.0 bits (26), Expect = 9e-005
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 562 ccgatcacgaacgacgggaggacagtcacaaggtcgatgccgttctccttggcgaactcc 621
||||| ||||||| ||| || || | ||| ||||||||| |||||||||||||||||||
Sbjct: 571 ccgatgacgaacgtcggaagaacggccacgaggtcgatgttgttctccttggcgaactcc 512
Query: 622 ca 623
||
Sbjct: 511 ca 510
>gb|BJ213500.1|BJ213500 BJ213500 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh22l14 5', mRNA sequence
Length = 646
Score = 127 bits (64), Expect = 2e-027
Identities = 199/244 (81%)
Strand = Plus / Minus
Query: 895 gatgcagtgtggaatacaccctcacaggccatcacggcgctgtcgaagctcccttcttcc 954
||||| |||||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 252 gatgcggtgtggaagacgccctcacaggccatcacggcatcgtcgaagctcccttcttcc 193
Query: 955 aacagatcagctcgcacgatttgcagcctctctttagcgccaggtaatttccaaaggtgg 1014
|| || ||||| | || | | ||||| ||| ||||| || | ||| ||||| |||||
Sbjct: 192 aagaggtcagccctgacaagctccagcccctccttagcacctgctaagttccagaggtgt 133
Query: 1015 gctgtcttttggtgatttcctgggtccctgacagtccctaccacatgatatccagactcg 1074
||| ||| | ||||| |||||||| ||||| ||||||| |||||||| || ||||||
Sbjct: 132 gctaccttcttctgattgcctgggtctctgactgtccctagaacatgataacctgactcg 73
Query: 1075 aggagccgtttgataagccaagaggcaacaaagcctgaggccccggttacgcataccttg 1134
|| || || |||| ||||||||||||||||||||| ||||| || || || || ||||||
Sbjct: 72 agaagtcgcttgacaagccaagaggcaacaaagccagaggctccagtgacacacaccttg 13
Query: 1135 ccct 1138
||||
Sbjct: 12 ccct 9
Score = 89.7 bits (45), Expect = 4e-016
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 760 gacgacgaagacgtaaggacgacccttttcaggaacgggttcttcttgcacgatctcagc 819
|||||||||||||| ||||| |||||||| ||||| || ||||||||||| |||||||||
Sbjct: 381 gacgacgaagacgtgaggacaacccttttgaggaatggattcttcttgcaggatctcagc 322
Query: 820 acgttcagagtaccgtt 836
||||| ||||| |||||
Sbjct: 321 acgtttagagtgccgtt 305
Score = 52.0 bits (26), Expect = 9e-005
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 562 ccgatcacgaacgacgggaggacagtcacaaggtcgatgccgttctccttggcgaactcc 621
||||| ||||||| ||| || || | ||| ||||||||| |||||||||||||||||||
Sbjct: 579 ccgatgacgaacgtcggaagaacggccacgaggtcgatgttgttctccttggcgaactcc 520
Query: 622 ca 623
||
Sbjct: 519 ca 518
>gb|BJ211483.1|BJ211483 BJ211483 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh30o24 5', mRNA sequence
Length = 532
Score = 125 bits (63), Expect = 7e-027
Identities = 207/255 (81%)
Strand = Plus / Minus
Query: 886 aggacgggggatgcagtgtggaatacaccctcacaggccatcacggcgctgtcgaagctc 945
||||| || |||||| ||||||| ||||||||||| |||||||| || || ||||||
Sbjct: 267 aggacaggtgatgcaatgtggaagacaccctcacaagccatcacagcatcatcaaagctc 208
Query: 946 ccttcttccaacagatcagctcgcacgatttgcagcctctctttagcgccaggtaatttc 1005
||||| ||||| | |||||||| ||| | ||| |||||||| || || ||||||||||||
Sbjct: 207 ccttcctccaataaatcagctctcacaagttggagcctctcatttgcaccaggtaatttc 148
Query: 1006 caaaggtgggctgtcttttggtgatttcctgggtccctgacagtccctaccacatgatat 1065
|||||||| | |||| |||| ||||| || ||||| ||||||| ||||||||||
Sbjct: 147 caaaggtgtccaacttttttccgattccctggatctctgactgtccctatcacatgatat 88
Query: 1066 ccagactcgaggagccgtttgataagccaagaggcaacaaagcctgaggccccggttacg 1125
||| |||| || || | ||||| ||||||||||| | ||||||||||||||| |||||
Sbjct: 87 ccacactcaagaagtctcttgatgagccaagaggcgagaaagcctgaggccccagttaca 28
Query: 1126 cataccttgcccttg 1140
|| || |||||||||
Sbjct: 27 cacactttgcccttg 13
Score = 87.7 bits (44), Expect = 2e-015
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 628 gctttctctgcaaataccttggctagggcataccatagatgcatcttctcgcagagtggc 687
|||||||||||||||||||| || |||||||||||||| || | ||| ||||||||||||
Sbjct: 522 gctttctctgcaaatacctttgccagggcataccatagctgtagcttttcgcagagtggc 463
Query: 688 acggagctccatgtcgtttc 707
|| |||||||| || |||||
Sbjct: 462 acagagctccacgttgtttc 443
Score = 54.0 bits (27), Expect = 2e-005
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 739 tcgtccctgatcctcaccgcagacgacgaagacgtaaggacgacccttttcaggaacggg 798
|||||||| ||||||||||| ||||| ||||| || || || |||| ||| || |||||
Sbjct: 414 tcgtccctaatcctcaccgcggacgatgaagatgtgagaacaacccgttttagaaacgga 355
Query: 799 ttcttcttgcacgatctcagcac 821
||||||||||||| || |||||
Sbjct: 354 ctcttcttgcacgaccttagcac 332
>gb|BJ210747.1|BJ210747 BJ210747 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh29i12 5', mRNA sequence
Length = 540
Score = 125 bits (63), Expect = 7e-027
Identities = 177/215 (82%)
Strand = Plus / Minus
Query: 895 gatgcagtgtggaatacaccctcacaggccatcacggcgctgtcgaagctcccttcttcc 954
|||||||||||||| || ||||| ||||||||||| || |||||||||||||||||||
Sbjct: 234 gatgcagtgtggaagacgccctcgcaggccatcacagcatcgtcgaagctcccttcttcc 175
Query: 955 aacagatcagctcgcacgatttgcagcctctctttagcgccaggtaatttccaaaggtgg 1014
|| || ||||| | ||||| | ||||||||| ||||| || | ||| ||||| |||||
Sbjct: 174 aagaggtcagccctcacgagctccagcctctccttagcacctgctaagttccagaggtgt 115
Query: 1015 gctgtcttttggtgatttcctgggtccctgacagtccctaccacatgatatccagactcg 1074
||| ||| | ||||| |||||||| ||||| ||||||| |||||||| || |||||
Sbjct: 114 gctaccttcttctgattgcctgggtctctgactgtccctagaacatgataccctgactca 55
Query: 1075 aggagccgtttgataagccaagaggcaacaaagcc 1109
|| || || |||| |||||||||||||||||||||
Sbjct: 54 agaagtcgcttgacaagccaagaggcaacaaagcc 20
Score = 73.8 bits (37), Expect = 2e-011
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 760 gacgacgaagacgtaaggacgacccttttcaggaacgggttcttcttgcacgatctcagc 819
||||| || ||||| ||||| |||||||| || || |||||||||||||| |||||||||
Sbjct: 363 gacgatgacgacgtgaggacaacccttttgagaaatgggttcttcttgcaggatctcagc 304
Query: 820 acgttcagagtaccgtt 836
||||| ||||| |||||
Sbjct: 303 acgtttagagtgccgtt 287
Score = 48.1 bits (24), Expect = 0.001
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 592 aggtcgatgccgttctccttggcgaactccca 623
||||||||| |||||||||||||||||||||
Sbjct: 531 aggtcgatgttgttctccttggcgaactccca 500
>gb|BJ212019.1|BJ212019 BJ212019 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh34h11 5', mRNA sequence
Length = 635
Score = 123 bits (62), Expect = 3e-026
Identities = 197/242 (81%)
Strand = Plus / Minus
Query: 895 gatgcagtgtggaatacaccctcacaggccatcacggcgctgtcgaagctcccttcttcc 954
||||| |||||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 242 gatgcggtgtggaagacgccctcacaggccatcacggcatcgtcgaagctcccttcttcc 183
Query: 955 aacagatcagctcgcacgatttgcagcctctctttagcgccaggtaatttccaaaggtgg 1014
|| || ||||| | || | | ||||| ||| ||||| || | ||| ||||| |||||
Sbjct: 182 aagaggtcagccctgacaagctccagcccctccttagcacctgctaagttccagaggtgt 123
Query: 1015 gctgtcttttggtgatttcctgggtccctgacagtccctaccacatgatatccagactcg 1074
||| ||| | ||||| |||||||| ||||| ||||||| |||||||| || ||||||
Sbjct: 122 gctaccttcttctgattgcctgggtctctgactgtccctagaacatgataacctgactcg 63
Query: 1075 aggagccgtttgataagccaagaggcaacaaagcctgaggccccggttacgcataccttg 1134
|| || || |||| ||||||||||||||||||||| ||||| || || || || ||||||
Sbjct: 62 agaagtcgcttgacaagccaagaggcaacaaagccagaggctccagtgacacacaccttg 3
Query: 1135 cc 1136
||
Sbjct: 2 cc 1
Score = 89.7 bits (45), Expect = 4e-016
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 760 gacgacgaagacgtaaggacgacccttttcaggaacgggttcttcttgcacgatctcagc 819
|||||||||||||| ||||| |||||||| ||||| || ||||||||||| |||||||||
Sbjct: 371 gacgacgaagacgtgaggacaacccttttgaggaatggattcttcttgcaggatctcagc 312
Query: 820 acgttcagagtaccgtt 836
||||| ||||| |||||
Sbjct: 311 acgtttagagtgccgtt 295
Score = 52.0 bits (26), Expect = 9e-005
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 562 ccgatcacgaacgacgggaggacagtcacaaggtcgatgccgttctccttggcgaactcc 621
||||| ||||||| ||| || || | ||| ||||||||| |||||||||||||||||||
Sbjct: 569 ccgatgacgaacgtcggaagaacggccacgaggtcgatgttgttctccttggcgaactcc 510
Query: 622 ca 623
||
Sbjct: 509 ca 508
>gb|BJ207654.1|BJ207654 BJ207654 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh4m06 5', mRNA sequence
Length = 529
Score = 121 bits (61), Expect = 1e-025
Identities = 181/221 (81%)
Strand = Plus / Minus
Query: 895 gatgcagtgtggaatacaccctcacaggccatcacggcgctgtcgaagctcccttcttcc 954
||||| |||||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 227 gatgcggtgtggaagacgccctcacaggccatcacggcatcgtcgaagctcccttcttcc 168
Query: 955 aacagatcagctcgcacgatttgcagcctctctttagcgccaggtaatttccaaaggtgg 1014
|| || ||||| | || | | ||||| ||| ||||| || | ||| ||||| |||||
Sbjct: 167 aagaggtcagccctgacaagctccagcccctccttagcacctgctaagttccagaggtgt 108
Query: 1015 gctgtcttttggtgatttcctgggtccctgacagtccctaccacatgatatccagactcg 1074
||| ||| | ||||| |||||||| ||||| ||||||| |||||||| || ||||||
Sbjct: 107 gctaccttcttctgattgcctgggtctctgactgtccctagaacatgataacctgactcg 48
Query: 1075 aggagccgtttgataagccaagaggcaacaaagcctgaggc 1115
|| || || |||| ||||||||||||||||||||| |||||
Sbjct: 47 agaagtcgcttgacaagccaagaggcaacaaagccagaggc 7
Score = 89.7 bits (45), Expect = 4e-016
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 760 gacgacgaagacgtaaggacgacccttttcaggaacgggttcttcttgcacgatctcagc 819
|||||||||||||| ||||| |||||||| ||||| || ||||||||||| |||||||||
Sbjct: 356 gacgacgaagacgtgaggacaacccttttgaggaatggattcttcttgcaggatctcagc 297
Query: 820 acgttcagagtaccgtt 836
||||| ||||| |||||
Sbjct: 296 acgtttagagtgccgtt 280
Score = 48.1 bits (24), Expect = 0.001
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 592 aggtcgatgccgttctccttggcgaactccca 623
||||||||| |||||||||||||||||||||
Sbjct: 524 aggtcgatgttgttctccttggcgaactccca 493
>gb|BJ211640.1|BJ211640 BJ211640 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh32e08 5', mRNA sequence
Length = 312
Score = 119 bits (60), Expect = 4e-025
Identities = 126/148 (85%)
Strand = Plus / Minus
Query: 166 gggcactccagcaggtgtccctggtctttgagcgactgtacgcagtcgtcgaacatctcc 225
||||||||||||| || ||||| |||| ||||||| |||||||||| |||||||||
Sbjct: 170 gggcactccagcaaatggccctgagctttcagcgactcgacgcagtcgttgaacatctct 111
Query: 226 tgcacccctctgaacttgaagcccagcccctgcagcttcgacgtgttcagctggtacgac 285
||||| ||| ||||||||| |||||||||||| ||||| || ||||| ||||| |||| |
Sbjct: 110 tgcactcctttgaacttgaggcccagcccctggagcttggatgtgtttagctgatacgcc 51
Query: 286 tgcttgccgtaggggctgttcagcctcc 313
||||| ||||||||| |||| |||||||
Sbjct: 50 tgctttccgtaggggttgttgagcctcc 23
>gb|BJ209016.1|BJ209016 BJ209016 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh12c06 5', mRNA sequence
Length = 510
Score = 103 bits (52), Expect = 3e-020
Identities = 194/240 (80%), Gaps = 1/240 (0%)
Strand = Plus / Minus
Query: 886 aggacgggggatgcagtgtggaatacaccctcacaggccatcacggcgctgtcgaagctc 945
||||| || |||||| ||||||| ||||||||||| |||||||| || || ||||||
Sbjct: 241 aggacaggtgatgcaatgtggaagacaccctcacaagccatcacagcatcatcaaagctc 182
Query: 946 ccttcttccaacagatcagctcgcacgatttgcagcctctctttagcgccaggtaatttc 1005
||||| ||||| | |||||||| ||| | ||| |||||||| || || ||||||||||||
Sbjct: 181 ccttcctccaataaatcagctctcacaagttggagcctctcatttgcaccaggtaatttc 122
Query: 1006 caaaggtgggctgtcttttggtgatttcctgggtccctgacagtccctaccacatgatat 1065
|||||||| | |||| |||| ||||| || ||||| ||||||| ||||||||||
Sbjct: 121 caaaggtgtccaacttttttccgattccctggatctctgactgtccctatcacatgatat 62
Query: 1066 ccagactcgaggag-ccgtttgataagccaagaggcaacaaagcctgaggccccggttac 1124
||| |||| || || | ||||| ||||||||||| | ||||||||||||||| |||||
Sbjct: 61 ccacactcaagaagtctccttgatgagccaagaggcgagaaagcctgaggccccagttac 2
Score = 87.7 bits (44), Expect = 2e-015
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 628 gctttctctgcaaataccttggctagggcataccatagatgcatcttctcgcagagtggc 687
|||||||||||||||||||| || |||||||||||||| || | ||| ||||||||||||
Sbjct: 496 gctttctctgcaaatacctttgccagggcataccatagctgtagcttttcgcagagtggc 437
Query: 688 acggagctccatgtcgtttc 707
|| |||||||| || |||||
Sbjct: 436 acagagctccacgttgtttc 417
Score = 54.0 bits (27), Expect = 2e-005
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 739 tcgtccctgatcctcaccgcagacgacgaagacgtaaggacgacccttttcaggaacggg 798
|||||||| ||||||||||| ||||| ||||| || || || |||| ||| || |||||
Sbjct: 388 tcgtccctaatcctcaccgcggacgatgaagatgtgagaacaacccgttttagaaacgga 329
Query: 799 ttcttcttgcacgatctcagcac 821
||||||||||||| || |||||
Sbjct: 328 ctcttcttgcacgaccttagcac 306
>gb|BJ218476.1|BJ218476 BJ218476 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh37o01 3', mRNA sequence
Length = 643
Score = 101 bits (51), Expect = 1e-019
Identities = 114/135 (84%)
Strand = Plus / Plus
Query: 166 gggcactccagcaggtgtccctggtctttgagcgactgtacgcagtcgtcgaacatctcc 225
||||||||||||| || |||||| |||| ||||||| |||||||||| |||||||||
Sbjct: 221 gggcactccagcaaatggccctgggctttcagcgactcgacgcagtcgttgaacatctct 280
Query: 226 tgcacccctctgaacttgaagcccagcccctgcagcttcgacgtgttcagctggtacgac 285
||||| ||| ||||||||| ||||||||||| ||||| || ||||| ||||| |||| |
Sbjct: 281 tgcactcctttgaacttgagacccagcccctggagcttggatgtgttgagctgatacgcc 340
Query: 286 tgcttgccgtagggg 300
||||| || ||||||
Sbjct: 341 tgctttccatagggg 355
Score = 58.0 bits (29), Expect = 1e-006
Identities = 128/161 (79%)
Strand = Plus / Plus
Query: 418 tcgtacaccaggatgtggctgctcgcaacgtcgtcgatgtggacgtaccccattcttccg 477
|||||||| || |||||||| | ||||||||||||||||| || || ||||| || ||
Sbjct: 473 tcgtacactagaatgtggctccgtgcaacgtcgtcgatgtgaacatatcccatcctccca 532
Query: 478 tacgagctgaaccttgccgtgtcgccttggaataggcctaggacgtctgaagcggtaacg 537
||||| ||||||| | ||||| ||||| | || ||| |||| || ||||| ||
Sbjct: 533 tacgaagtgaacctgtctgtgtcaccttgaagtaagccaaggatatcagaagcagttgta 592
Query: 538 catagttcgtgggacaaactgggcccgatcacgaacgacgg 578
|| ||||| ||||||||||||||||| |||||||| |||||
Sbjct: 593 cacagttcatgggacaaactgggcccaatcacgaatgacgg 633
>gb|BJ219300.1|BJ219300 BJ219300 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh33j11 3', mRNA sequence
Length = 695
Score = 101 bits (51), Expect = 1e-019
Identities = 114/135 (84%)
Strand = Plus / Plus
Query: 166 gggcactccagcaggtgtccctggtctttgagcgactgtacgcagtcgtcgaacatctcc 225
||||||||||||| || ||||| |||| ||||||| |||||||||| |||||||||
Sbjct: 178 gggcactccagcaaatggccctgagctttcagcgactcgacgcagtcgttgaacatctct 237
Query: 226 tgcacccctctgaacttgaagcccagcccctgcagcttcgacgtgttcagctggtacgac 285
||||| ||| ||||||||| ||||||||||| ||||| || ||||||||||| |||| |
Sbjct: 238 tgcactcctttgaacttgagacccagcccctggagcttggatgtgttcagctgatacgcc 297
Query: 286 tgcttgccgtagggg 300
||||| || ||||||
Sbjct: 298 tgctttccatagggg 312
Score = 97.6 bits (49), Expect = 2e-018
Identities = 198/248 (79%)
Strand = Plus / Plus
Query: 418 tcgtacaccaggatgtggctgctcgcaacgtcgtcgatgtggacgtaccccattcttccg 477
|||||||| || |||||||| | ||||| ||||| ||||| || || ||||| |||||
Sbjct: 430 tcgtacactagaatgtggctccgtgcaacatcgtcaatgtgaacatatcccatccttcca 489
Query: 478 tacgagctgaaccttgccgtgtcgccttggaataggcctaggacgtctgaagcggtaacg 537
||||| ||||||| ||||||| ||||| | || ||| |||| || ||||| ||
Sbjct: 490 tacgaagtgaacctgtccgtgtcaccttgaagtaagccaaggatatcagaagcagttgta 549
Query: 538 catagttcgtgggacaaactgggcccgatcacgaacgacgggaggacagtcacaaggtcg 597
|| ||||| ||||||||||||||||| |||||||| || || || ||||| ||||||||
Sbjct: 550 cacagttcatgggacaaactgggcccaatcacgaatgaaggaagaacagtgacaaggtca 609
Query: 598 atgccgttctccttggcgaactcccacgccgctttctctgcaaataccttggctagggca 657
||| || | |||||| || ||| | || |||||||||||||||||||| || ||||||
Sbjct: 610 atgttattttncttggcaaagtccaatgctgctttctctgcaaatacctttgccagggca 669
Query: 658 taccatag 665
||||||||
Sbjct: 670 taccatag 677
>gb|CD454149.1|CD454149 WHE0979_G07_M13ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0979_G07_M13, mRNA sequence
Length = 709
Score = 101 bits (51), Expect = 1e-019
Identities = 114/135 (84%)
Strand = Plus / Plus
Query: 166 gggcactccagcaggtgtccctggtctttgagcgactgtacgcagtcgtcgaacatctcc 225
||||||||||||| || ||||| |||| ||||||| |||||||||| |||||||||
Sbjct: 226 gggcactccagcaaatggccctgagctttcagcgactcgacgcagtcgttgaacatctct 285
Query: 226 tgcacccctctgaacttgaagcccagcccctgcagcttcgacgtgttcagctggtacgac 285
||||| ||| ||||||||| ||||||||||| ||||| || ||||||||||| |||| |
Sbjct: 286 tgcactcctttgaacttgagacccagcccctggagcttggatgtgttcagctgatacgcc 345
Query: 286 tgcttgccgtagggg 300
||||| || ||||||
Sbjct: 346 tgctttccatagggg 360
Score = 77.8 bits (39), Expect = 2e-012
Identities = 180/227 (79%)
Strand = Plus / Plus
Query: 418 tcgtacaccaggatgtggctgctcgcaacgtcgtcgatgtggacgtaccccattcttccg 477
|||||||| || |||||||| | ||||| ||||| ||||| || || ||||| |||||
Sbjct: 478 tcgtacactagaatgtggctccgtgcaacatcgtcaatgtgaacatatcccatccttcca 537
Query: 478 tacgagctgaaccttgccgtgtcgccttggaataggcctaggacgtctgaagcggtaacg 537
||||| ||||||| ||||||| ||||| | || ||| |||| || ||||| ||
Sbjct: 538 tacgaagtgaacctgtccgtgtcaccttgaagtaagccaaggatatcagaagcagttgta 597
Query: 538 catagttcgtgggacaaactgggcccgatcacgaacgacgggaggacagtcacaaggtcg 597
|| ||||| ||||||||||||||||| |||||||| || || || ||||| ||||||||
Sbjct: 598 cacagttcatgggacaaactgggcccaatcacgaatgaaggaagaacagtgacaaggtca 657
Query: 598 atgccgttctccttggcgaactcccacgccgctttctctgcaaatac 644
||| || |||||||| || ||| | || |||||||||||||||||
Sbjct: 658 atgttattttccttggcaaagtccaatgctgctttctctgcaaatac 704
>gb|BJ207234.1|BJ207234 BJ207234 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh2m23 5', mRNA sequence
Length = 582
Score = 99.6 bits (50), Expect = 4e-019
Identities = 113/134 (84%)
Strand = Plus / Minus
Query: 337 cgtttcgcgagcgaggagaccagctcgtcgttgtccagcaccactgagctgcacaggtac 396
|||||||||||| ||| ||||||||||||| || |||| ||| | ||| |||| | ||||
Sbjct: 355 cgtttcgcgagcaaggcgaccagctcgtcgctgcccagaaccgccgagttgcagatgtac 296
Query: 397 ctcccggcggcctggggggcctcgtacaccaggatgtggctgctcgcaacgtcgtcgatg 456
||||| ||| | || || ||||| ||||||||||||| |||||| ||||||||||||
Sbjct: 295 ctccccttggcgtcggcggtttcgtagaccaggatgtggcagctcgcgacgtcgtcgatg 236
Query: 457 tggacgtaccccat 470
||||||||||||||
Sbjct: 235 tggacgtaccccat 222
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 209 agtcgtcgaacatctcctgcacccctctgaacttgaagccc 249
|||| ||||||||||||| ||| |||||||||| |||||||
Sbjct: 484 agtcatcgaacatctcctccacgcctctgaactcgaagccc 444
>gb|BJ214514.1|BJ214514 BJ214514 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh2m23 3', mRNA sequence
Length = 720
Score = 99.6 bits (50), Expect = 4e-019
Identities = 113/134 (84%)
Strand = Plus / Plus
Query: 337 cgtttcgcgagcgaggagaccagctcgtcgttgtccagcaccactgagctgcacaggtac 396
|||||||||||| ||| ||||||||||||| || |||| ||| | ||| |||| | ||||
Sbjct: 381 cgtttcgcgagcaaggcgaccagctcgtcgctgcccagaaccgccgagttgcagatgtac 440
Query: 397 ctcccggcggcctggggggcctcgtacaccaggatgtggctgctcgcaacgtcgtcgatg 456
||||| ||| | || || ||||| ||||||||||||| |||||| ||||||||||||
Sbjct: 441 ctccccttggcgtcggcggtttcgtagaccaggatgtggcagctcgcgacgtcgtcgatg 500
Query: 457 tggacgtaccccat 470
||||||||||||||
Sbjct: 501 tggacgtaccccat 514
Score = 42.1 bits (21), Expect = 0.084
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 209 agtcgtcgaacatctcctgcacccctctgaact 241
|||| ||||||||||||| ||| ||||||||||
Sbjct: 253 agtcatcgaacatctcctccacgcctctgaact 285
>gb|BJ216548.1|BJ216548 BJ216548 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh12m14 3', mRNA sequence
Length = 597
Score = 99.6 bits (50), Expect = 4e-019
Identities = 113/134 (84%)
Strand = Plus / Plus
Query: 337 cgtttcgcgagcgaggagaccagctcgtcgttgtccagcaccactgagctgcacaggtac 396
|||||||||||| ||| ||||||||||||| || |||| ||| | ||| |||| | ||||
Sbjct: 364 cgtttcgcgagcaaggcgaccagctcgtcgctgcccagaaccgccgagttgcagatgtac 423
Query: 397 ctcccggcggcctggggggcctcgtacaccaggatgtggctgctcgcaacgtcgtcgatg 456
||||| ||| | || || ||||| ||||||||||||| |||||| ||||||||||||
Sbjct: 424 ctccccttggcgtcggcggtttcgtagaccaggatgtggcagctcgcgacgtcgtcgatg 483
Query: 457 tggacgtaccccat 470
||||||||||||||
Sbjct: 484 tggacgtaccccat 497
Score = 42.1 bits (21), Expect = 0.084
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 209 agtcgtcgaacatctcctgcacccctctgaact 241
|||| ||||||||||||| ||| ||||||||||
Sbjct: 236 agtcatcgaacatctcctccacgcctctgaact 268
>gb|BJ219323.1|BJ219323 BJ219323 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh33l03 3', mRNA sequence
Length = 611
Score = 99.6 bits (50), Expect = 4e-019
Identities = 113/134 (84%)
Strand = Plus / Plus
Query: 337 cgtttcgcgagcgaggagaccagctcgtcgttgtccagcaccactgagctgcacaggtac 396
|||||||||||| ||| ||||||||||||| || |||| ||| | ||| |||| | ||||
Sbjct: 365 cgtttcgcgagcaaggcgaccagctcgtcgctgcccagaaccgccgagttgcagatgtac 424
Query: 397 ctcccggcggcctggggggcctcgtacaccaggatgtggctgctcgcaacgtcgtcgatg 456
||||| ||| | || || ||||| ||||||||||||| |||||| ||||||||||||
Sbjct: 425 ctccccttggcgtcggcggtttcgtagaccaggatgtggcagctcgcgacgtcgtcgatg 484
Query: 457 tggacgtaccccat 470
||||||||||||||
Sbjct: 485 tggacgtaccccat 498
Score = 42.1 bits (21), Expect = 0.084
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 209 agtcgtcgaacatctcctgcacccctctgaact 241
|||| ||||||||||||| ||| ||||||||||
Sbjct: 237 agtcatcgaacatctcctccacgcctctgaact 269
>gb|CK208266.1|CK208266 FGAS019965 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1138
Score = 99.6 bits (50), Expect = 4e-019
Identities = 113/134 (84%)
Strand = Plus / Plus
Query: 337 cgtttcgcgagcgaggagaccagctcgtcgttgtccagcaccactgagctgcacaggtac 396
|||||||||||| ||| ||||||||||||| || |||| ||| | ||| |||| | ||||
Sbjct: 430 cgtttcgcgagcaaggcgaccagctcgtcgctgcccagaaccgccgagttgcagatgtac 489
Query: 397 ctcccggcggcctggggggcctcgtacaccaggatgtggctgctcgcaacgtcgtcgatg 456
||||| ||| | || || ||||| ||||||||||||| |||||| ||||||||||||
Sbjct: 490 ctccccttggcgtcggcggtttcgtagaccaggatgtggcagctcgcgacgtcgtcgatg 549
Query: 457 tggacgtaccccat 470
||||||||||||||
Sbjct: 550 tggacgtaccccat 563
Score = 42.1 bits (21), Expect = 0.084
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 209 agtcgtcgaacatctcctgcacccctctgaact 241
|||| ||||||||||||| ||| ||||||||||
Sbjct: 302 agtcatcgaacatctcctccacgcctctgaact 334
>gb|BJ219109.1|BJ219109 BJ219109 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh32e08 3', mRNA sequence
Length = 232
Score = 97.6 bits (49), Expect = 2e-018
Identities = 110/131 (83%)
Strand = Plus / Plus
Query: 166 gggcactccagcaggtgtccctggtctttgagcgactgtacgcagtcgtcgaacatctcc 225
||||||||||||| || ||||| |||| ||||||| |||||| ||| |||||||||
Sbjct: 102 gggcactccagcaaatggccctgagctttcagcgactcgacgcagncgttgaacatctct 161
Query: 226 tgcacccctctgaacttgaagcccagcccctgcagcttcgacgtgttcagctggtacgac 285
||||| ||| ||||||||| |||||||||||| ||||| || ||||| ||||| |||| |
Sbjct: 162 tgcactcctttgaacttgaggcccagcccctggagcttggatgtgttnagctgatacgcc 221
Query: 286 tgcttgccgta 296
||||| |||||
Sbjct: 222 tgctttccgta 232
>gb|BJ218921.1|BJ218921 BJ218921 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh30o24 3', mRNA sequence
Length = 558
Score = 95.6 bits (48), Expect = 7e-018
Identities = 113/135 (83%)
Strand = Plus / Plus
Query: 166 gggcactccagcaggtgtccctggtctttgagcgactgtacgcagtcgtcgaacatctcc 225
||||||||||||| || |||||| |||| ||||||| |||||||||| ||||||||
Sbjct: 214 gggcactccagcaaatggccctgggctttcagcgactcgacgcagtcgttgaacatctnt 273
Query: 226 tgcacccctctgaacttgaagcccagcccctgcagcttcgacgtgttcagctggtacgac 285
||||| ||| ||||||||| ||||||||||| ||||| || ||||| ||||| |||| |
Sbjct: 274 tgcactcctttgaacttgagacccagcccctggagcttggatgtgttgagctgatacgcc 333
Query: 286 tgcttgccgtagggg 300
||||| || ||||||
Sbjct: 334 tgctttccatagggg 348
Score = 44.1 bits (22), Expect = 0.021
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 418 tcgtacaccaggatgtggctgctcgcaacgtcgtcgatgtggacgtaccccattcttccg 477
|||||||| || |||||||| | ||||||||||||||||| || || ||||| || ||
Sbjct: 466 tcgtacactagaatgtggctccgtgcaacgtcgtcgatgtgaacatatcccatcctccca 525
Query: 478 tacgagctgaacct 491
||||| |||||||
Sbjct: 526 tacgaagtgaacct 539
>gb|BJ216410.1|BJ216410 BJ216410 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh12c06 3', mRNA sequence
Length = 462
Score = 91.7 bits (46), Expect = 1e-016
Identities = 112/135 (82%)
Strand = Plus / Plus
Query: 166 gggcactccagcaggtgtccctggtctttgagcgactgtacgcagtcgtcgaacatctcc 225
||||||||||||| || |||||| |||| ||||||| |||||||||| |||||| |
Sbjct: 237 gggcactccagcaaatggccctgggctttcagcgactcgacgcagtcgttgaacatntnt 296
Query: 226 tgcacccctctgaacttgaagcccagcccctgcagcttcgacgtgttcagctggtacgac 285
||||| ||| ||||||||| ||||||||||| ||||| || ||||| ||||| |||| |
Sbjct: 297 tgcactcctttgaacttganacccagcccctggagcttggatgtgttgagctgatacgcc 356
Query: 286 tgcttgccgtagggg 300
||||| || ||||||
Sbjct: 357 tgctttccatagggg 371
>gb|BJ211871.1|BJ211871 BJ211871 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh33l03 5', mRNA sequence
Length = 662
Score = 91.7 bits (46), Expect = 1e-016
Identities = 139/170 (81%)
Strand = Plus / Minus
Query: 895 gatgcagtgtggaatacaccctcacaggccatcacggcgctgtcgaagctcccttcttcc 954
|||||||||||||| || ||||| ||||||||||| || |||||||||||||||||||
Sbjct: 212 gatgcagtgtggaagacgccctcgcaggccatcacagcatcgtcgaagctcccttcttcc 153
Query: 955 aacagatcagctcgcacgatttgcagcctctctttagcgccaggtaatttccaaaggtgg 1014
|| || ||||| | ||||| | ||||||||| ||||| || | ||| ||||| |||||
Sbjct: 152 aagaggtcagccctcacgagctccagcctctccttagcacctgctaagttccagaggtgt 93
Query: 1015 gctgtcttttggtgatttcctgggtccctgacagtccctaccacatgata 1064
||| ||| | ||||| |||||||| ||||| ||||||| ||||||||
Sbjct: 92 gctaccttcttctgattgcctgggtctctgactgtccctagaacatgata 43
Score = 73.8 bits (37), Expect = 2e-011
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 760 gacgacgaagacgtaaggacgacccttttcaggaacgggttcttcttgcacgatctcagc 819
||||| || ||||| ||||| |||||||| || || |||||||||||||| |||||||||
Sbjct: 341 gacgatgacgacgtgaggacaacccttttgagaaatgggttcttcttgcaggatctcagc 282
Query: 820 acgttcagagtaccgtt 836
||||| ||||| |||||
Sbjct: 281 acgtttagagtgccgtt 265
Score = 56.0 bits (28), Expect = 6e-006
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 439 ctcgcaacgtcgtcgatgtggacgtaccccat 470
||||| ||||||||||||||||||||||||||
Sbjct: 662 ctcgcgacgtcgtcgatgtggacgtaccccat 631
Score = 52.0 bits (26), Expect = 9e-005
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 562 ccgatcacgaacgacgggaggacagtcacaaggtcgatgccgttctccttggcgaactcc 621
||||| ||||||| ||| || || | ||| ||||||||| |||||||||||||||||||
Sbjct: 539 ccgatgacgaacgtcggaagaacggccacgaggtcgatgttgttctccttggcgaactcc 480
Query: 622 ca 623
||
Sbjct: 479 ca 478
>gb|BJ214395.1|BJ214395 BJ214395 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh2d05 3', mRNA sequence
Length = 678
Score = 91.7 bits (46), Expect = 1e-016
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 337 cgtttcgcgagcgaggagaccagctcgtcgttgtccagcaccactgagctgcacaggtac 396
|||||||||||| ||| ||||||||||| | | ||||| ||| | ||| |||| | ||||
Sbjct: 371 cgtttcgcgagcaaggcgaccagctcgttgctatccagaaccgccgagttgcagatgtac 430
Query: 397 ctcccggcggcctggggggcctcgtacaccaggatgtggctgctcgcaacgtcgtcgatg 456
||||| ||| | || || ||||| ||||||||||||| |||||| ||||||||||||
Sbjct: 431 ctccccttggcgtcggcggtttcgtagaccaggatgtggcagctcgcgacgtcgtcgatg 490
Query: 457 tggacgtaccccat 470
||||||||||||||
Sbjct: 491 tggacgtaccccat 504
Score = 50.1 bits (25), Expect = 3e-004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 209 agtcgtcgaacatctcctgcacccctctgaact 241
|||||||||||||||||| ||| ||||||||||
Sbjct: 243 agtcgtcgaacatctcctccacgcctctgaact 275
Score = 48.1 bits (24), Expect = 0.001
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 562 ccgatcacgaacgacgggaggacagtcacaaggtcgatgccgttctccttggcgaactcc 621
||||| ||||||| ||| || || | ||| ||||||||| ||||| |||||||||||||
Sbjct: 596 ccgatgacgaacgtcggaagaacggccacgaggtcgatgttgttctncttggcgaactcc 655
Query: 622 cacgccgctttctc 635
|| || | ||||||
Sbjct: 656 cangctgatttctc 669
>gb|BJ214937.1|BJ214937 BJ214937 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh4m06 3', mRNA sequence
Length = 667
Score = 91.7 bits (46), Expect = 1e-016
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 337 cgtttcgcgagcgaggagaccagctcgtcgttgtccagcaccactgagctgcacaggtac 396
|||||||||||| ||| ||||||||||| | | ||||| ||| | ||| |||| | ||||
Sbjct: 356 cgtttcgcgagcaaggcgaccagctcgttgctatccagaaccgccgagttgcagatgtac 415
Query: 397 ctcccggcggcctggggggcctcgtacaccaggatgtggctgctcgcaacgtcgtcgatg 456
||||| ||| | || || ||||| ||||||||||||| |||||| ||||||||||||
Sbjct: 416 ctccccttggcgtcggcggtttcgtagaccaggatgtggcagctcgcgacgtcgtcgatg 475
Query: 457 tggacgtaccccat 470
||||||||||||||
Sbjct: 476 tggacgtaccccat 489
Score = 52.0 bits (26), Expect = 9e-005
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 562 ccgatcacgaacgacgggaggacagtcacaaggtcgatgccgttctccttggcgaactcc 621
||||| ||||||| ||| || || | ||| ||||||||| |||||||||||||||||||
Sbjct: 581 ccgatgacgaacgtcggaagaacggccacgaggtcgatgttgttctccttggcgaactcc 640
Query: 622 ca 623
||
Sbjct: 641 ca 642
Score = 50.1 bits (25), Expect = 3e-004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 209 agtcgtcgaacatctcctgcacccctctgaact 241
|||||||||||||||||| ||| ||||||||||
Sbjct: 228 agtcgtcgaacatctcctccacgcctctgaact 260
>gb|BJ218000.1|BJ218000 BJ218000 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh29i12 3', mRNA sequence
Length = 610
Score = 91.7 bits (46), Expect = 1e-016
Identities = 127/153 (83%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 319 atggggaatatcgggtagcgtttcgcgagcgaggagaccagctcgtcgttgtccagcacc 378
|||||||| || ||| | |||||||||||| ||| ||||||||||||| || |||| |||
Sbjct: 347 atggggaacatagggaaccgtttcgcgagcaaggcgaccagctcgtcgctgcccagaacc 406
Query: 379 actgagctgcacaggtacctcccggcggcctggggggcct-cgtacaccaggatgtggct 437
| ||| |||| | ||||||||| ||| | || || | |||| |||||||||||||
Sbjct: 407 gccgagttgcagatgtacctccccttggcgtcggcggntttcgtagaccaggatgtggca 466
Query: 438 gctcgcaacgtcgtcgatgtggacgtaccccat 470
|||||| ||||||||||||||||||||||||||
Sbjct: 467 gctcgcgacgtcgtcgatgtggacgtaccccat 499
Score = 42.1 bits (21), Expect = 0.084
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 209 agtcgtcgaacatctcctgcacccctctgaact 241
|||| ||||||||||||| ||| ||||||||||
Sbjct: 237 agtcatcgaacatctcctccacgcctctgaact 269
>gb|BJ218731.1|BJ218731 BJ218731 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh30a10 3', mRNA sequence
Length = 466
Score = 91.7 bits (46), Expect = 1e-016
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 337 cgtttcgcgagcgaggagaccagctcgtcgttgtccagcaccactgagctgcacaggtac 396
|||||||||||| ||| ||||||||||| | | ||||| ||| | ||| |||| | ||||
Sbjct: 287 cgtttcgcgagcaaggcgaccagctcgttgctatccagaaccgccgagttgcagatgtac 346
Query: 397 ctcccggcggcctggggggcctcgtacaccaggatgtggctgctcgcaacgtcgtcgatg 456
||||| ||| | || || ||||| ||||||||||||| |||||| ||||||||||||
Sbjct: 347 ctccccttggcgtcggcggtttcgtagaccaggatgtggcagctcgcgacgtcgtcgatg 406
Query: 457 tggacgtaccccat 470
||||||||||||||
Sbjct: 407 tggacgtaccccat 420
Score = 50.1 bits (25), Expect = 3e-004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 209 agtcgtcgaacatctcctgcacccctctgaact 241
|||||||||||||||||| ||| ||||||||||
Sbjct: 159 agtcgtcgaacatctcctccacgcctctgaact 191
>gb|BJ219467.1|BJ219467 BJ219467 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh34h11 3', mRNA sequence
Length = 641
Score = 91.7 bits (46), Expect = 1e-016
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 337 cgtttcgcgagcgaggagaccagctcgtcgttgtccagcaccactgagctgcacaggtac 396
|||||||||||| ||| ||||||||||| | | ||||| ||| | ||| |||| | ||||
Sbjct: 372 cgtttcgcgagcaaggcgaccagctcgttgctatccagaaccgccgagttgcagatgtac 431
Query: 397 ctcccggcggcctggggggcctcgtacaccaggatgtggctgctcgcaacgtcgtcgatg 456
||||| ||| | || || ||||| ||||||||||||| |||||| ||||||||||||
Sbjct: 432 ctccccttggcgtcggcggtttcgtagaccaggatgtggcagctcgcgacgtcgtcgatg 491
Query: 457 tggacgtaccccat 470
||||||||||||||
Sbjct: 492 tggacgtaccccat 505
Score = 50.1 bits (25), Expect = 3e-004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 209 agtcgtcgaacatctcctgcacccctctgaact 241
|||||||||||||||||| ||| ||||||||||
Sbjct: 244 agtcgtcgaacatctcctccacgcctctgaact 276
>gb|BJ221002.1|BJ221002 BJ221002 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh22l14 3', mRNA sequence
Length = 603
Score = 91.7 bits (46), Expect = 1e-016
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 337 cgtttcgcgagcgaggagaccagctcgtcgttgtccagcaccactgagctgcacaggtac 396
|||||||||||| ||| ||||||||||| | | ||||| ||| | ||| |||| | ||||
Sbjct: 356 cgtttcgcgagcaaggcgaccagctcgttgctatccagaaccgccgagttgcagatgtac 415
Query: 397 ctcccggcggcctggggggcctcgtacaccaggatgtggctgctcgcaacgtcgtcgatg 456
||||| ||| | || || ||||| ||||||||||||| |||||| ||||||||||||
Sbjct: 416 ctccccttggcgtcggcggtttcgtagaccaggatgtggcagctcgcgacgtcgtcgatg 475
Query: 457 tggacgtaccccat 470
||||||||||||||
Sbjct: 476 tggacgtaccccat 489
Score = 50.1 bits (25), Expect = 3e-004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 209 agtcgtcgaacatctcctgcacccctctgaact 241
|||||||||||||||||| ||| ||||||||||
Sbjct: 228 agtcgtcgaacatctcctccacgcctctgaact 260
>gb|BF483715.1|BF483715 WHE2336_H12_P24ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2336_H12_P24, mRNA sequence
Length = 579
Score = 89.7 bits (45), Expect = 4e-016
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 760 gacgacgaagacgtaaggacgacccttttcaggaacgggttcttcttgcacgatctcagc 819
|||||||||||||| ||||| |||||||| ||||| || ||||||||||| |||||||||
Sbjct: 207 gacgacgaagacgtgaggacaacccttttgaggaatggattcttcttgcaggatctcagc 148
Query: 820 acgttcagagtaccgtt 836
||||| ||||| |||||
Sbjct: 147 acgtttagagtgccgtt 131
Score = 75.8 bits (38), Expect = 6e-012
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 418 tcgtacaccaggatgtggctgctcgcaacgtcgtcgatgtggacgtaccccat 470
||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||
Sbjct: 549 tcgtagaccaggatgtggcagctcgcgacgtcgtcgatgtggacgtacnccat 497
Score = 61.9 bits (31), Expect = 9e-008
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 895 gatgcagtgtggaatacaccctcacaggccatcacggcgctgtcgaagctcccttcttcc 954
||||| |||||||| || |||||||||||||||||||| ||||||||| |||||||||
Sbjct: 78 gatgcggtgtggaagacgccctcacaggccatcacggcatcgtcgaagct-ccttcttcc 20
Query: 955 aacagatcagc 965
|| || |||||
Sbjct: 19 aagaggtcagc 9
Score = 52.0 bits (26), Expect = 9e-005
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 562 ccgatcacgaacgacgggaggacagtcacaaggtcgatgccgttctccttggcgaactcc 621
||||| ||||||| ||| || || | ||| ||||||||| |||||||||||||||||||
Sbjct: 405 ccgatgacgaacgtcggaagaacggccacgaggtcgatgttgttctccttggcgaactcc 346
Query: 622 ca 623
||
Sbjct: 345 ca 344
>gb|BJ207113.1|BJ207113 BJ207113 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh2d05 5', mRNA sequence
Length = 556
Score = 89.7 bits (45), Expect = 4e-016
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 760 gacgacgaagacgtaaggacgacccttttcaggaacgggttcttcttgcacgatctcagc 819
|||||||||||||| ||||| |||||||| ||||| || ||||||||||| |||||||||
Sbjct: 207 gacgacgaagacgtgaggacaacccttttgaggaatggattcttcttgcaggatctcagc 148
Query: 820 acgttcagagtaccgtt 836
||||| ||||| |||||
Sbjct: 147 acgtttagagtgccgtt 131
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 418 tcgtacaccaggatgtggctgctcgcaacgtcgtcgatgtggacgtaccccat 470
||||| ||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 549 tcgtagaccaggatgtggcagctcgcgacgtcgtcgatgtggacgtaccccat 497
Score = 77.8 bits (39), Expect = 2e-012
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 895 gatgcagtgtggaatacaccctcacaggccatcacggcgctgtcgaagctcccttcttcc 954
||||| |||||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 78 gatgcggtgtggaagacgccctcacaggccatcacggcatcgtcgaagctcccttcttcc 19
Query: 955 aacagatcagc 965
|| || |||||
Sbjct: 18 aagaggtcagc 8
Score = 52.0 bits (26), Expect = 9e-005
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 562 ccgatcacgaacgacgggaggacagtcacaaggtcgatgccgttctccttggcgaactcc 621
||||| ||||||| ||| || || | ||| ||||||||| |||||||||||||||||||
Sbjct: 405 ccgatgacgaacgtcggaagaacggccacgaggtcgatgttgttctccttggcgaactcc 346
Query: 622 ca 623
||
Sbjct: 345 ca 344
>gb|BJ221444.1|BJ221444 BJ221444 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh25d08 3', mRNA sequence
Length = 600
Score = 83.8 bits (42), Expect = 2e-014
Identities = 111/134 (82%)
Strand = Plus / Plus
Query: 337 cgtttcgcgagcgaggagaccagctcgtcgttgtccagcaccactgagctgcacaggtac 396
|||||||||||| | | ||||||||||||| || |||| ||| | ||| |||| | ||||
Sbjct: 398 cgtttcgcgagcaacgcgaccagctcgtcgctgcccagaaccgccgagttgcagatgtac 457
Query: 397 ctcccggcggcctggggggcctcgtacaccaggatgtggctgctcgcaacgtcgtcgatg 456
||||| ||| || || ||||| ||||||||||||| |||||| ||||||||||||
Sbjct: 458 ctccccttggcaccggcggtttcgtagaccaggatgtggcagctcgcgacgtcgtcgatg 517
Query: 457 tggacgtaccccat 470
||||||||||||||
Sbjct: 518 tggacgtaccccat 531
>gb|BJ220870.1|BJ220870 BJ220870 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh22b10 3', mRNA sequence
Length = 170
Score = 81.8 bits (41), Expect = 1e-013
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 418 tcgtacaccaggatgtggctgctcgcaacgtcgtcgatgtggacgtaccccat 470
||||| ||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 19 tcgtagaccaggatgtggcagctcgcgacgtcgtcgatgtggacgtaccccat 71
>gb|BJ209131.1|BJ209131 BJ209131 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh12m14 5', mRNA sequence
Length = 256
Score = 77.8 bits (39), Expect = 2e-012
Identities = 99/119 (83%)
Strand = Plus / Minus
Query: 895 gatgcagtgtggaatacaccctcacaggccatcacggcgctgtcgaagctcccttcttcc 954
|||||||||||||| || ||||| ||||||||||| || |||||||||||||||||||
Sbjct: 138 gatgcagtgtggaagacgccctcgcaggccatcacagcatcgtcgaagctcccttcttcc 79
Query: 955 aacagatcagctcgcacgatttgcagcctctctttagcgccaggtaatttccaaaggtg 1013
|| || ||||| | ||||| | ||||||||| ||||| || | ||| ||||| |||||
Sbjct: 78 aagaggtcagccctcacgagctccagcctctccttagcacctgctaagttccagaggtg 20
Score = 48.1 bits (24), Expect = 0.001
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 782 cccttttcaggaacgggttctt-cttgcacgatctcagcacgttcagagtaccgtt 836
||||||| || || |||||||| |||||| |||||||||||||| ||||| |||||
Sbjct: 246 cccttttgagaaatgggttcttgcttgcaggatctcagcacgtttagagtgccgtt 191
>gb|BJ214885.1|BJ214885 BJ214885 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh4i14 3', mRNA sequence
Length = 557
Score = 63.9 bits (32), Expect = 2e-008
Identities = 110/135 (81%), Gaps = 1/135 (0%)
Strand = Plus / Plus
Query: 337 cgtttcgcgagcgaggagaccagctcgtcgttgtccagcaccactgagctgcacaggtac 396
|||||||||||| | | ||||||||||||| || |||| ||| | ||| |||| | ||||
Sbjct: 420 cgtttcgcgagcaacgcgaccagctcgtcgctgcccagaaccgccgagttgcagatgtac 479
Query: 397 ctcccggcggcctggggggcctcgtacaccaggatgtggctgctcgcaacgtcgtcgatg 456
||||| ||| || || ||||| |||| |||||||| |||||| ||||||||||||
Sbjct: 480 ctccccttggcaccggcggtttcgtagaccangatgtggcagctcgcgacgtcgtcgatg 539
Query: 457 t-ggacgtaccccat 470
| |||||||||||||
Sbjct: 540 tgggacgtaccccat 554
Score = 54.0 bits (27), Expect = 2e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 191 ctttgagcgactgtacgcagtcgtcgaacatctcctgcacccctctgaact 241
|||||||||||| || |||||||||||||||||| ||| ||||||||||
Sbjct: 274 ctttgagcgactccaccgagtcgtcgaacatctcctccacgcctctgaact 324
>gb|BJ213371.1|BJ213371 BJ213371 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh22b10 5', mRNA sequence
Length = 207
Score = 52.0 bits (26), Expect = 9e-005
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 562 ccgatcacgaacgacgggaggacagtcacaaggtcgatgccgttctccttggcgaactcc 621
||||| ||||||| ||| || || | ||| ||||||||| |||||||||||||||||||
Sbjct: 193 ccgatgacgaacgtcggaagaacggccacgaggtcgatgttgttctccttggcgaactcc 134
Query: 622 ca 623
||
Sbjct: 133 ca 132
>gb|BJ262590.1|BJ262590 BJ262590 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh19h07 3', mRNA sequence
Length = 564
Score = 40.1 bits (20), Expect = 0.33
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 210 gtcgtcgaacatctcctgca 229
||||||||||||||||||||
Sbjct: 108 gtcgtcgaacatctcctgca 127
>gb|AY772733.1| Triticum aestivum clone BAC TA1426L2, *** SEQUENCING IN PROGRESS ***,
21 unordered pieces
Length = 125527
Score = 40.1 bits (20), Expect = 0.33
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 934 ctgtcgaagctcccttcttc 953
||||||||||||||||||||
Sbjct: 96319 ctgtcgaagctcccttcttc 96300
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 194,006
Number of Sequences: 636343
Number of extensions: 194006
Number of successful extensions: 51974
Number of sequences better than 0.5: 43
Number of HSP's better than 0.5 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51816
Number of HSP's gapped (non-prelim): 152
length of query: 1157
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1137
effective length of database: 354,513,379
effective search space: 403081711923
effective search space used: 403081711923
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)