BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3183567.2.1
(681 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF483644.1|BF483644 WHE2336_B12_D24ZS Wheat pre-anthesis... 281 3e-074
gb|BJ237797.1|BJ237797 BJ237797 Y. Ogihara unpublished cDNA... 281 3e-074
gb|BJ255805.1|BJ255805 BJ255805 Y. Ogihara unpublished cDNA... 281 3e-074
gb|BJ261335.1|BJ261335 BJ261335 Y. Ogihara unpublished cDNA... 281 3e-074
gb|BJ262029.1|BJ262029 BJ262029 Y. Ogihara unpublished cDNA... 281 3e-074
gb|BJ264839.1|BJ264839 BJ264839 Y. Ogihara unpublished cDNA... 281 3e-074
gb|BJ281166.1|BJ281166 BJ281166 Y. Ogihara unpublished cDNA... 281 3e-074
gb|BJ285498.1|BJ285498 BJ285498 Y. Ogihara unpublished cDNA... 281 3e-074
gb|BJ256519.1|BJ256519 BJ256519 Y. Ogihara unpublished cDNA... 268 5e-070
gb|BE430314.1|BE430314 SUN001.E06R991203 ITEC SUN Wheat cDN... 266 2e-069
gb|CD454822.1|CD454822 WHE3454_B03_D06ZT CS wheat pre-anthe... 258 4e-067
gb|BQ752922.1|BQ752922 WHE4120_G01_N02ZS Wheat salt-stresse... 250 1e-064
gb|CF132992.1|CF132992 WHE4352_G06_M12ZT Wheat meiotic flor... 248 4e-064
gb|BE403209.1|BE403209 WHE0426_F09_K18ZS Wheat etiolated se... 240 1e-061
gb|BQ238117.1|BQ238117 TaE05008D01F TaE05 Triticum aestivum... 190 9e-047
gb|BJ238871.1|BJ238871 BJ238871 Y. Ogihara unpublished cDNA... 186 1e-045
gb|BE405887.1|BE405887 WHE0401_d05_d05zB Wheat etiolated se... 182 2e-044
gb|CK196185.1|CK196185 FGAS004632 Triticum aestivum FGAS: L... 172 2e-041
gb|BJ240643.1|BJ240643 BJ240643 Y. Ogihara unpublished cDNA... 161 8e-038
gb|BE403220.1|BE403220 WHE0426_G09_M18ZS Wheat etiolated se... 151 7e-035
gb|BJ290615.1|BJ290615 BJ290615 Y. Ogihara unpublished cDNA... 133 2e-029
gb|BJ297203.1|BJ297203 BJ297203 Y. Ogihara unpublished cDNA... 133 2e-029
gb|BJ258721.1|BJ258721 BJ258721 Y. Ogihara unpublished cDNA... 115 4e-024
gb|BQ171144.1|BQ171144 WHE2336_B12_D24ZT Wheat pre-anthesis... 100 2e-019
gb|BQ237751.1|BQ237751 TaE05012F03F TaE05 Triticum aestivum... 88 9e-016
gb|BF201513.1|BF201513 WHE1771_E01_I01ZS Wheat pre-anthesis... 80 2e-013
gb|CD866041.1|CD866041 AZO2.102G17F001124 AZO2 Triticum aes... 80 2e-013
gb|CD935312.1|CD935312 OV.101E10F010201 OV Triticum aestivu... 78 9e-013
gb|BJ286226.1|BJ286226 BJ286226 Y. Ogihara unpublished cDNA... 74 1e-011
gb|CV522402.1|CV522402 RH-321 Triticum aestivum subtracted,... 52 5e-005
gb|CV522443.1|CV522443 RH-624 Triticum aestivum subtracted,... 44 0.012
gb|BJ235298.1|BJ235298 BJ235298 Y. Ogihara unpublished cDNA... 40 0.19
gb|BQ243264.1|BQ243264 TaE15017B03F TaE15 Triticum aestivum... 40 0.19
gb|CK207737.1|CK207737 FGAS019397 Triticum aestivum FGAS: L... 40 0.19
>gb|BF483644.1|BF483644 WHE2336_B12_D24ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2336_B12_D24, mRNA sequence
Length = 476
Score = 281 bits (142), Expect = 3e-074
Identities = 274/318 (86%)
Strand = Plus / Minus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| || |||| |||||||
Sbjct: 453 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggaccgctcccggccgaa 394
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgagattataacgttcatggcgtcgacgta 431
|||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||| | |
Sbjct: 393 gcccatgaggtcgaggtagtactggtagtgggagatgatgacgttcatctcgtcgatgaa 334
Query: 432 tcccttgccgcagatcgactcgccgtagagtatgttcatggtggcgccgaacccaggcag 491
||| |||||||||| |||||||||||||| | |||||||||||||||||| || || ||
Sbjct: 333 gcccctgccgcagatggactcgccgtagaggaggttcatggtggcgccgaagcccgggag 274
Query: 492 gcgtttgctgagcgtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgc 551
||| |||||||||||||||||||||||||||||||| ||| |||||| ||||||||
Sbjct: 273 gcgcttgctgagcgtgtcgttcttggtgggcttccacacccccgtgaaggcctcgtgcgc 214
Query: 552 cgacggctggctcttcttgatcggcgtcatccaccgccacatcgccgccatgaatgccag 611
||||||||| |||||||||| |||||||||||||||||||| |||||| ||| |||||
Sbjct: 213 cgacggctgcttcttcttgatgggcgtcatccaccgccacatggccgccgcgaacgccag 154
Query: 612 cgtcgcgttctgctccag 629
||||||||||||||||||
Sbjct: 153 cgtcgcgttctgctccag 136
>gb|BJ237797.1|BJ237797 BJ237797 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe11e16 3', mRNA sequence
Length = 782
Score = 281 bits (142), Expect = 3e-074
Identities = 274/318 (86%)
Strand = Plus / Plus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| || |||| |||||||
Sbjct: 330 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggaccgctcccggccgaa 389
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgagattataacgttcatggcgtcgacgta 431
|||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||| | |
Sbjct: 390 gcccatgaggtcgaggtagtactggtagtgggagatgatgacgttcatctcgtcgatgaa 449
Query: 432 tcccttgccgcagatcgactcgccgtagagtatgttcatggtggcgccgaacccaggcag 491
||| |||||||||| |||||||||||||| | |||||||||||||||||| || || ||
Sbjct: 450 gcccctgccgcagatggactcgccgtagaggaggttcatggtggcgccgaagcccgggag 509
Query: 492 gcgtttgctgagcgtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgc 551
||| |||||||||||||||||||||||||||||||| ||| |||||| ||||||||
Sbjct: 510 gcgcttgctgagcgtgtcgttcttggtgggcttccacacccccgtgaaggcctcgtgcgc 569
Query: 552 cgacggctggctcttcttgatcggcgtcatccaccgccacatcgccgccatgaatgccag 611
||||||||| |||||||||| |||||||||||||||||||| |||||| ||| |||||
Sbjct: 570 cgacggctgcttcttcttgatgggcgtcatccaccgccacatggccgccgcgaacgccag 629
Query: 612 cgtcgcgttctgctccag 629
||||||||||||||||||
Sbjct: 630 cgtcgcgttctgctccag 647
>gb|BJ255805.1|BJ255805 BJ255805 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh2h18 5', mRNA sequence
Length = 413
Score = 281 bits (142), Expect = 3e-074
Identities = 274/318 (86%)
Strand = Plus / Minus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| ||| |||| |||||||
Sbjct: 380 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggagcgctcccggccgaa 321
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgagattataacgttcatggcgtcgacgta 431
|||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||| | |
Sbjct: 320 gcccatgaggtcgaggtagtactggtagtgggagatgatgacgttcatctcgtcgatgaa 261
Query: 432 tcccttgccgcagatcgactcgccgtagagtatgttcatggtggcgccgaacccaggcag 491
||| ||||||||| |||||||||||||| | |||||||||||||||||| || || ||
Sbjct: 260 gccccggccgcagatggactcgccgtagaggaggttcatggtggcgccgaagcccgggag 201
Query: 492 gcgtttgctgagcgtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgc 551
||| |||||||||||||||||||||||||||||||| ||| |||||| ||||||||
Sbjct: 200 gcgcttgctgagcgtgtcgttcttggtgggcttccacacccccgtgaaggcctcgtgcgc 141
Query: 552 cgacggctggctcttcttgatcggcgtcatccaccgccacatcgccgccatgaatgccag 611
||||||||| |||||||||| |||||||||||||||||||| |||||| ||| |||||
Sbjct: 140 cgacggctgcttcttcttgatgggcgtcatccaccgccacatggccgccgcgaacgccag 81
Query: 612 cgtcgcgttctgctccag 629
||||||||||||||||||
Sbjct: 80 cgtcgcgttctgctccag 63
>gb|BJ261335.1|BJ261335 BJ261335 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh2h18 3', mRNA sequence
Length = 640
Score = 281 bits (142), Expect = 3e-074
Identities = 274/318 (86%)
Strand = Plus / Plus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| ||| |||| |||||||
Sbjct: 285 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggagcgctcccggccgaa 344
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgagattataacgttcatggcgtcgacgta 431
|||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||| | |
Sbjct: 345 gcccatgaggtcgaggtagtactggtagtgggagatgatgacgttcatctcgtcgatgaa 404
Query: 432 tcccttgccgcagatcgactcgccgtagagtatgttcatggtggcgccgaacccaggcag 491
||| ||||||||| |||||||||||||| | |||||||||||||||||| || || ||
Sbjct: 405 gccccggccgcagatggactcgccgtagaggaggttcatggtggcgccgaagcccgggag 464
Query: 492 gcgtttgctgagcgtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgc 551
||| |||||||||||||||||||||||||||||||| ||| |||||| ||||||||
Sbjct: 465 gcgcttgctgagcgtgtcgttcttggtgggcttccacacccccgtgaaggcctcgtgcgc 524
Query: 552 cgacggctggctcttcttgatcggcgtcatccaccgccacatcgccgccatgaatgccag 611
||||||||| |||||||||| |||||||||||||||||||| |||||| ||| |||||
Sbjct: 525 cgacggctgcttcttcttgatgggcgtcatccaccgccacatggccgccgcgaacgccag 584
Query: 612 cgtcgcgttctgctccag 629
||||||||||||||||||
Sbjct: 585 cgtcgcgttctgctccag 602
>gb|BJ262029.1|BJ262029 BJ262029 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh16n12 3', mRNA sequence
Length = 669
Score = 281 bits (142), Expect = 3e-074
Identities = 274/318 (86%)
Strand = Plus / Plus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| || |||| |||||||
Sbjct: 281 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggaccgctcccggccgaa 340
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgagattataacgttcatggcgtcgacgta 431
|||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||| | |
Sbjct: 341 gcccatgaggtcgaggtagtactggtagtgggagatgatgacgttcatctcgtcgatgaa 400
Query: 432 tcccttgccgcagatcgactcgccgtagagtatgttcatggtggcgccgaacccaggcag 491
||| |||||||||| |||||||||||||| | |||||||||||||||||| || || ||
Sbjct: 401 gcccctgccgcagatggactcgccgtagaggaggttcatggtggcgccgaagcccgggag 460
Query: 492 gcgtttgctgagcgtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgc 551
||| |||||||||||||||||||||||||||||||| ||| |||||| ||||||||
Sbjct: 461 gcgcttgctgagcgtgtcgttcttggtgggcttccacacccccgtgaaggcctcgtgcgc 520
Query: 552 cgacggctggctcttcttgatcggcgtcatccaccgccacatcgccgccatgaatgccag 611
||||||||| |||||||||| |||||||||||||||||||| |||||| ||| |||||
Sbjct: 521 cgacggctgcttcttcttgatgggcgtcatccaccgccacatggccgccgcgaacgccag 580
Query: 612 cgtcgcgttctgctccag 629
||||||||||||||||||
Sbjct: 581 cgtcgcgttctgctccag 598
>gb|BJ264839.1|BJ264839 BJ264839 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh9e16 3', mRNA sequence
Length = 631
Score = 281 bits (142), Expect = 3e-074
Identities = 274/318 (86%)
Strand = Plus / Plus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| || |||| |||||||
Sbjct: 233 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggaccgctcccggccgaa 292
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgagattataacgttcatggcgtcgacgta 431
|||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||| | |
Sbjct: 293 gcccatgaggtcgaggtagtactggtagtgggagatgatgacgttcatctcgtcgatgaa 352
Query: 432 tcccttgccgcagatcgactcgccgtagagtatgttcatggtggcgccgaacccaggcag 491
||| |||||||||| |||||||||||||| | |||||||||||||||||| || || ||
Sbjct: 353 gcccctgccgcagatggactcgccgtagaggaggttcatggtggcgccgaagcccgggag 412
Query: 492 gcgtttgctgagcgtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgc 551
||| |||||||||||||||||||||||||||||||| ||| |||||| ||||||||
Sbjct: 413 gcgcttgctgagcgtgtcgttcttggtgggcttccacacccccgtgaaggcctcgtgcgc 472
Query: 552 cgacggctggctcttcttgatcggcgtcatccaccgccacatcgccgccatgaatgccag 611
||||||||| |||||||||| |||||||||||||||||||| |||||| ||| |||||
Sbjct: 473 cgacggctgcttcttcttgatgggcgtcatccaccgccacatggccgccgcgaacgccag 532
Query: 612 cgtcgcgttctgctccag 629
||||||||||||||||||
Sbjct: 533 cgtcgcgttctgctccag 550
>gb|BJ281166.1|BJ281166 BJ281166 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr20m20 5', mRNA sequence
Length = 611
Score = 281 bits (142), Expect = 3e-074
Identities = 274/318 (86%)
Strand = Plus / Minus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| || |||| |||||||
Sbjct: 459 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggaccgctcccggccgaa 400
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgagattataacgttcatggcgtcgacgta 431
|||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||| | |
Sbjct: 399 gcccatgaggtcgaggtagtactggtagtgggagatgatgacgttcatctcgtcgatgaa 340
Query: 432 tcccttgccgcagatcgactcgccgtagagtatgttcatggtggcgccgaacccaggcag 491
||| |||||||||| |||||||||||||| | |||||||||||||||||| || || ||
Sbjct: 339 gcccctgccgcagatggactcgccgtagaggaggttcatggtggcgccgaagcccgggag 280
Query: 492 gcgtttgctgagcgtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgc 551
||| |||||||||||||||||||||||||||||||| ||| |||||| ||||||||
Sbjct: 279 gcgcttgctgagcgtgtcgttcttggtgggcttccacacccccgtgaaggcctcgtgcgc 220
Query: 552 cgacggctggctcttcttgatcggcgtcatccaccgccacatcgccgccatgaatgccag 611
||||||||| |||||||||| |||||||||||||||||||| |||||| ||| |||||
Sbjct: 219 cgacggctgcttcttcttgatgggcgtcatccaccgccacatggccgccgcgaacgccag 160
Query: 612 cgtcgcgttctgctccag 629
||||||||||||||||||
Sbjct: 159 cgtcgcgttctgctccag 142
>gb|BJ285498.1|BJ285498 BJ285498 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr8i20 3', mRNA sequence
Length = 620
Score = 281 bits (142), Expect = 3e-074
Identities = 274/318 (86%)
Strand = Plus / Plus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| || |||| |||||||
Sbjct: 281 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggaccgctcccggccgaa 340
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgagattataacgttcatggcgtcgacgta 431
|||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||| | |
Sbjct: 341 gcccatgaggtcgaggtagtactggtagtgggagatgatgacgttcatctcgtcgatgaa 400
Query: 432 tcccttgccgcagatcgactcgccgtagagtatgttcatggtggcgccgaacccaggcag 491
||| |||||||||| |||||||||||||| | |||||||||||||||||| || || ||
Sbjct: 401 gcccctgccgcagatggactcgccgtagaggaggttcatggtggcgccgaagcccgggag 460
Query: 492 gcgtttgctgagcgtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgc 551
||| |||||||||||||||||||||||||||||||| ||| |||||| ||||||||
Sbjct: 461 gcgcttgctgagcgtgtcgttcttggtgggcttccacacccccgtgaaggcctcgtgcgc 520
Query: 552 cgacggctggctcttcttgatcggcgtcatccaccgccacatcgccgccatgaatgccag 611
||||||||| |||||||||| |||||||||||||||||||| |||||| ||| |||||
Sbjct: 521 cgacggctgcttcttcttgatgggcgtcatccaccgccacatggccgccgcgaacgccag 580
Query: 612 cgtcgcgttctgctccag 629
||||||||||||||||||
Sbjct: 581 cgtcgcgttctgctccag 598
>gb|BJ256519.1|BJ256519 BJ256519 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh16n12 5', mRNA sequence
Length = 637
Score = 268 bits (135), Expect = 5e-070
Identities = 237/271 (87%)
Strand = Plus / Minus
Query: 359 gctcacggccgacgcccatgaggtcaaggtaatactggtagtgcgagattataacgttca 418
|||| ||||||| |||||||||||| ||||| ||||||||||| ||||| || |||||||
Sbjct: 632 gctcccggccgaagcccatgaggtcgaggtagtactggtagtgggagatgatgacgttca 573
Query: 419 tggcgtcgacgtatcccttgccgcagatcgactcgccgtagagtatgttcatggtggcgc 478
| |||||| | | ||| |||||||||| |||||||||||||| | ||||||||||||||
Sbjct: 572 tctcgtcgatgaagcccctgccgcagatggactcgccgtagaggaggttcatggtggcgc 513
Query: 479 cgaacccaggcaggcgtttgctgagcgtgtcgttcttggtgggcttccagttgcccacga 538
|||| || || ||||| |||||||||||||||||||||||||||||||| ||| ||
Sbjct: 512 cgaagcccgggaggcgcttgctgagcgtgtcgttcttggtgggcttccacacccccgtga 453
Query: 539 aggcgtcgtgcgccgacggctggctcttcttgatcggcgtcatccaccgccacatcgccg 598
|||| ||||||||||||||||| |||||||||| |||||||||||||||||||| ||||
Sbjct: 452 aggcctcgtgcgccgacggctgcttcttcttgatgggcgtcatccaccgccacatggccg 393
Query: 599 ccatgaatgccagcgtcgcgttctgctccag 629
|| ||| |||||||||||||||||||||||
Sbjct: 392 ccgcgaacgccagcgtcgcgttctgctccag 362
>gb|BE430314.1|BE430314 SUN001.E06R991203 ITEC SUN Wheat cDNA Library Triticum aestivum
cDNA clone SUN001.E06, mRNA sequence
Length = 638
Score = 266 bits (134), Expect = 2e-069
Identities = 273/318 (85%), Gaps = 1/318 (0%)
Strand = Plus / Plus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| || |||| |||||||
Sbjct: 276 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggaccgctcccggccgaa 335
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgagattataacgttcatggcgtcgacgta 431
|||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||| | |
Sbjct: 336 gcccatgaggtcgaggtagtactggtagtgggagatgatgacgttcatctcgtcgatgaa 395
Query: 432 tcccttgccgcagatcgactcgccgtagagtatgttcatggtggcgccgaacccaggcag 491
||| |||||||||| |||||||||||||| | |||||||||||||||||| || || ||
Sbjct: 396 gcccctgccgcagatggactcgccgtagaggaggttcatggtggcgccgaagcccgggag 455
Query: 492 gcgtttgctgagcgtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgc 551
||| |||||||||||||||||||||||||||||||| ||| |||||| ||||||||
Sbjct: 456 gcgcttgctgagcgtgtcgttcttggtgggcttccacacccccgtgaaggcctcgtgcgc 515
Query: 552 cgacggctggctcttcttgatcggcgtcatccaccgccacatcgccgccatgaatgccag 611
||||||||| |||||||||| |||||||||||||||||||| |||||| ||| |||||
Sbjct: 516 cgacggctgcttcttcttgatgggcgtcatccaccgccacatggccgccgcgaacgccag 575
Query: 612 cgtcgcgttctgctccag 629
||||||| ||||||||||
Sbjct: 576 cgtcgcg-tctgctccag 592
>gb|CD454822.1|CD454822 WHE3454_B03_D06ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE3454_B03_D06, mRNA sequence
Length = 667
Score = 258 bits (130), Expect = 4e-067
Identities = 271/318 (85%)
Strand = Plus / Plus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| ||| |||| |||||||
Sbjct: 334 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggagcgctcccggccgaa 393
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgagattataacgttcatggcgtcgacgta 431
|||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||| | |
Sbjct: 394 gcccatgaggtcgaggtagtactggtagtgggagatgatgacgttcatctcgtcgatgaa 453
Query: 432 tcccttgccgcagatcgactcgccgtagagtatgttcatggtggcgccgaacccaggcag 491
||| ||||||||| |||||||||||||| | |||||||||||||||||| || || ||
Sbjct: 454 gccccggccgcagatggactcgccgtagaggaggttcatggtggcgccgaagcccgggag 513
Query: 492 gcgtttgctgagcgtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgc 551
||| ||||| ||||||||||||||| |||||||||| ||| ||| || ||||||||
Sbjct: 514 gcgcttgctcagcgtgtcgttcttgctgggcttccacacccccgtgaaagcctcgtgcgc 573
Query: 552 cgacggctggctcttcttgatcggcgtcatccaccgccacatcgccgccatgaatgccag 611
||||||||| |||||||||| |||||||||||||||||||| |||||| ||| |||||
Sbjct: 574 cgacggctgcttcttcttgatgggcgtcatccaccgccacatggccgccgcgaacgccag 633
Query: 612 cgtcgcgttctgctccag 629
||||||||||||||||||
Sbjct: 634 cgtcgcgttctgctccag 651
>gb|BQ752922.1|BQ752922 WHE4120_G01_N02ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4120_G01_N02, mRNA sequence
Length = 727
Score = 250 bits (126), Expect = 1e-064
Identities = 270/318 (84%)
Strand = Plus / Minus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| ||| |||| |||||||
Sbjct: 577 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggagcgctcccggccgaa 518
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgagattataacgttcatggcgtcgacgta 431
|||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||| | |
Sbjct: 517 gcccatgaggtcgaggtagtactggtagtgggagatgatgacgttcatctcgtcgatgaa 458
Query: 432 tcccttgccgcagatcgactcgccgtagagtatgttcatggtggcgccgaacccaggcag 491
||| |||| |||| |||||||||||||| | |||||||||||||||||| || || ||
Sbjct: 457 gccccggccgaagatggactcgccgtagaggaggttcatggtggcgccgaagcccgggag 398
Query: 492 gcgtttgctgagcgtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgc 551
||| ||||| ||||||||||||||| |||||||||| ||| ||| || ||||||||
Sbjct: 397 gcgcttgctcagcgtgtcgttcttgctgggcttccacacccccgtgaaagcctcgtgcgc 338
Query: 552 cgacggctggctcttcttgatcggcgtcatccaccgccacatcgccgccatgaatgccag 611
||||||||| |||||||||| |||||||||||||||||||| |||||| ||| |||||
Sbjct: 337 cgacggctgcttcttcttgatgggcgtcatccaccgccacatggccgccgcgaacgccag 278
Query: 612 cgtcgcgttctgctccag 629
||||||||||||||||||
Sbjct: 277 cgtcgcgttctgctccag 260
>gb|CF132992.1|CF132992 WHE4352_G06_M12ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4352_G06_M12, mRNA sequence
Length = 754
Score = 248 bits (125), Expect = 4e-064
Identities = 260/305 (85%)
Strand = Plus / Minus
Query: 325 gcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgacgcccatgaggtca 384
|||||||||||||| || ||||| ||| ||| |||| ||||||| ||||||||||||
Sbjct: 748 gcctgctcggcgcagtcgaggttgaggccggagcgctcccggccgaagcccatgaggtcg 689
Query: 385 aggtaatactggtagtgcgagattataacgttcatggcgtcgacgtatcccttgccgcag 444
||||| ||||||||||| ||||| || |||||||| |||||| | | ||| |||||||
Sbjct: 688 aggtagtactggtagtgggagatgatgacgttcatctcgtcgatgaagccccggccgcag 629
Query: 445 atcgactcgccgtagagtatgttcatggtggcgccgaacccaggcaggcgtttgctgagc 504
|| |||||||||||||| | |||||||||||||||||| || || ||||| ||||| |||
Sbjct: 628 atggactcgccgtagaggaggttcatggtggcgccgaagcccgggaggcgcttgctcagc 569
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
|||||||||||| |||||||||| ||| ||| || ||||||||||||||||| ||
Sbjct: 568 gtgtcgttcttgctgggcttccacacccccgtgaaagcctcgtgcgccgacggctgcttc 509
Query: 565 ttcttgatcggcgtcatccaccgccacatcgccgccatgaatgccagcgtcgcgttctgc 624
|||||||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||
Sbjct: 508 ttcttgatgggcgtcatccaccgccacatggccgccgcgaacgccagcgtcgcgttctgc 449
Query: 625 tccag 629
|||||
Sbjct: 448 tccag 444
>gb|BE403209.1|BE403209 WHE0426_F09_K18ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0426_F09_K18, mRNA
sequence
Length = 533
Score = 240 bits (121), Expect = 1e-061
Identities = 274/321 (85%), Gaps = 3/321 (0%)
Strand = Plus / Minus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| ||| |||| |||||||
Sbjct: 497 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggagcgctcccggccgaa 438
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgagattataacgttcatggcgtcgacgta 431
|||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||| | |
Sbjct: 437 gcccatgaggtcgaggtagtactggtagtgggagatgatgacgttcatctcgtcgatgaa 378
Query: 432 tcccttgccgcagatcgactcgccgtagagtatgttcatggtggcgccgaacccaggcag 491
||| ||||||||| ||||||| |||||| | |||||||||||||||||| || || ||
Sbjct: 377 gccccggccgcagatggactcgctgtagaggaggttcatggtggcgccgaagcccgggag 318
Query: 492 gcgtttgctgagcgtgtcgttcttggtgggctt-ccagttgcccacg-aaggcgtcgtgc 549
||| ||||||||||||||||||||||||||||| ||| ||| || ||||| ||||||
Sbjct: 317 gcgcttgctgagcgtgtcgttcttggtgggcttcccaccaccccccgtaaggcctcgtgc 258
Query: 550 gccgacggctggctcttcttgatcggcgtcat-ccaccgccacatcgccgccatgaatgc 608
||||||||||| |||||||||| |||||||| |||||||||||| |||||| ||| ||
Sbjct: 257 gccgacggctgcttcttcttgatgggcgtcatcccaccgccacatggccgccgcgaacgc 198
Query: 609 cagcgtcgcgttctgctccag 629
|||||||||||||||||||||
Sbjct: 197 cagcgtcgcgttctgctccag 177
>gb|BQ238117.1|BQ238117 TaE05008D01F TaE05 Triticum aestivum cDNA clone TaE05008D01F, mRNA
sequence
Length = 601
Score = 190 bits (96), Expect = 9e-047
Identities = 186/216 (86%)
Strand = Plus / Plus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| ||| |||| |||||||
Sbjct: 383 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggagcgctcccggccgaa 442
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgagattataacgttcatggcgtcgacgta 431
|||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||| | |
Sbjct: 443 gcccatgaggtcgaggtagtactggtagtgggagatgatgacgttcatctcgtcgatgaa 502
Query: 432 tcccttgccgcagatcgactcgccgtagagtatgttcatggtggcgccgaacccaggcag 491
||| ||||||||| |||||||||||||| | |||||||||||||||||| || || ||
Sbjct: 503 gccccggccgcagatggactcgccgtagaggaggttcatggtggcgccgaagcccgggag 562
Query: 492 gcgtttgctgagcgtgtcgttcttggtgggcttcca 527
||| ||||||||||||||||||||||||||||||||
Sbjct: 563 gcgcttgctgagcgtgtcgttcttggtgggcttcca 598
>gb|BJ238871.1|BJ238871 BJ238871 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe3m12 3', mRNA sequence
Length = 616
Score = 186 bits (94), Expect = 1e-045
Identities = 212/250 (84%), Gaps = 1/250 (0%)
Strand = Plus / Plus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| || |||| |||||||
Sbjct: 362 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggaccgctcccggccgaa 421
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgagattataacgttcatggcgtcgacgta 431
|||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||| | |
Sbjct: 422 gcccatgaggtcgaggtagtactggtagtgggagatgatgacgttcatctcgtcgatgaa 481
Query: 432 tcccttgccgcagatcgactcgccgtagagtatgttcatggtggcgccgaacccaggcag 491
||| |||||||||| |||||||||||||| | |||||||||||||||||| || || ||
Sbjct: 482 gcccctgccgcagatggactcgccgtagaggaggttcatggtggcgccgaagcccgggag 541
Query: 492 gcgtttgc-tgagcgtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcg 550
||| |||| |||||||||||||||||||||||||||| ||| |||||| |||||||
Sbjct: 542 gcgcttgcttgagcgtgtcgttcttggtgggcttccacacccccgtgaaggcctcgtgcg 601
Query: 551 ccgacggctg 560
||||||||||
Sbjct: 602 ccgacggctg 611
>gb|BE405887.1|BE405887 WHE0401_d05_d05zB Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0401_d05_d05, mRNA
sequence
Length = 383
Score = 182 bits (92), Expect = 2e-044
Identities = 167/192 (86%)
Strand = Plus / Minus
Query: 438 gccgcagatcgactcgccgtagagtatgttcatggtggcgccgaacccaggcaggcgttt 497
||||||||| |||||||||||||| | |||||||||||||||||| || || ||||| ||
Sbjct: 362 gccgcagatggactcgccgtagaggaggttcatggtggcgccgaagcccgggaggcgctt 303
Query: 498 gctgagcgtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacgg 557
||| ||||||||||||||| |||||||||| ||| ||| || ||||||||||||||
Sbjct: 302 gctcagcgtgtcgttcttgctgggcttccacacccccgtgaaagcctcgtgcgccgacgg 243
Query: 558 ctggctcttcttgatcggcgtcatccaccgccacatcgccgccatgaatgccagcgtcgc 617
||| |||||||||| || ||||||||||||||||| |||||| ||| |||||||||||
Sbjct: 242 ctgcttcttcttgatgggagtcatccaccgccacatggccgccgcgaacgccagcgtcgc 183
Query: 618 gttctgctccag 629
||||||||||||
Sbjct: 182 gttctgctccag 171
>gb|CK196185.1|CK196185 FGAS004632 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 823
Score = 172 bits (87), Expect = 2e-041
Identities = 261/314 (83%), Gaps = 4/314 (1%)
Strand = Plus / Plus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| | | ||| |||| |||||||
Sbjct: 512 ggggttgaagggggcctgctcggcgcagtcgaggttgagggcggagcgctcccggccgaa 571
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgagattataacgttcatgg-cgtcgacgt 430
|||||||||||| ||||| ||||||||||| ||||| || |||||||| ||| || |
Sbjct: 572 gcccatgaggtcgaggtagtactggtagtgggagatgatgacgttcatcttcgttgatga 631
Query: 431 atcccttgccgcagatcgactcgccgtagagtatgttcatggtggcgccgaacccaggca 490
| ||| ||||||||| |||||||||||||| | |||||||||||||||||| || || |
Sbjct: 632 agccccggccgcagatggactcgccgtagaggaggttcatggtggcgccgaagcccggga 691
Query: 491 ggcgtttgctgagcgtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcg 550
|||| ||||||||||||||||||||||||||||| || ||| ||||| |||||||
Sbjct: 692 ggcgcttgctgagcgtgtcgttcttggtgggctt-cacacccccgtgaagggctcgtgcg 750
Query: 551 ccgacggctggctcttcttgatcggcgtcatccaccgccacatcgccgccatgaatgcca 610
|||||||||| |||||||||| |||||||| ||||| ||||| |||| | ||| ||||
Sbjct: 751 ccgacggctgcttcttcttgatgggcgtcat-caccgncacatggccg-cgcgaacgcca 808
Query: 611 gcgtcgcgttctgc 624
| ||||||||||||
Sbjct: 809 gtgtcgcgttctgc 822
>gb|BJ240643.1|BJ240643 BJ240643 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe16j04 3', mRNA sequence
Length = 591
Score = 161 bits (81), Expect = 8e-038
Identities = 174/205 (84%)
Strand = Plus / Plus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| ||| |||| |||||||
Sbjct: 384 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggagcgctcccggccgaa 443
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgagattataacgttcatggcgtcgacgta 431
|||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||| | |
Sbjct: 444 gcccatgaggtcgaggtagtactggtagtgggagatgatgacgttcatctcgtcgatgaa 503
Query: 432 tcccttgccgcagatcgactcgccgtagagtatgttcatggtggcgccgaacccaggcag 491
||| ||||||||| |||||||||||||| | |||||||||||||||||| || || ||
Sbjct: 504 gccccggccgcagatggactcgccgtagaggaggttcatggtggcgccgaagcccgggag 563
Query: 492 gcgtttgctgagcgtgtcgttcttg 516
||| ||||| |||||||||||||||
Sbjct: 564 gcgcttgctcagcgtgtcgttcttg 588
>gb|BE403220.1|BE403220 WHE0426_G09_M18ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0426_G09_M18, mRNA
sequence
Length = 290
Score = 151 bits (76), Expect = 7e-035
Identities = 124/140 (88%)
Strand = Plus / Minus
Query: 490 aggcgtttgctgagcgtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgc 549
||||| |||||||||||||||||||||||||||||||| ||| |||||| ||||||
Sbjct: 280 aggcgcttgctgagcgtgtcgttcttggtgggcttccacacccccgtgaaggcatcgtgc 221
Query: 550 gccgacggctggctcttcttgatcggcgtcatccaccgccacatcgccgccatgaatgcc 609
||||||||||| ||||| |||| |||||||||||||||||||| |||||| ||| |||
Sbjct: 220 gccgacggctgcttcttcgtgatgggcgtcatccaccgccacatggccgccgcgaacgcc 161
Query: 610 agcgtcgcgttctgctccag 629
||||||||||||||||||||
Sbjct: 160 agcgtcgcgttctgctccag 141
>gb|BJ290615.1|BJ290615 BJ290615 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl19i11 5', mRNA sequence
Length = 515
Score = 133 bits (67), Expect = 2e-029
Identities = 145/171 (84%)
Strand = Plus / Minus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| ||| |||| |||||||
Sbjct: 177 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggagcgctcccggccgaa 118
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgagattataacgttcatggcgtcgacgta 431
|||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||| | |
Sbjct: 117 gcccatgaggtcgaggtagtactggtagtgggagatgatgacgttcatctcgtcgatgaa 58
Query: 432 tcccttgccgcagatcgactcgccgtagagtatgttcatggtggcgccgaa 482
||| ||||||||| |||||||||||||| | ||||||||||||||||||
Sbjct: 57 gccccggccgcagatggactcgccgtagaggaggttcatggtggcgccgaa 7
>gb|BJ297203.1|BJ297203 BJ297203 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl19i11 3', mRNA sequence
Length = 494
Score = 133 bits (67), Expect = 2e-029
Identities = 145/171 (84%)
Strand = Plus / Plus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| ||| |||| |||||||
Sbjct: 318 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggagcgctcccggccgaa 377
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgagattataacgttcatggcgtcgacgta 431
|||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||| | |
Sbjct: 378 gcccatgaggtcgaggtagtactggtagtgggagatgatgacgttcatctcgtcgatgaa 437
Query: 432 tcccttgccgcagatcgactcgccgtagagtatgttcatggtggcgccgaa 482
||| ||||||||| |||||||||||||| | ||||||||||||||||||
Sbjct: 438 gccccggccgcagatggactcgccgtagaggaggttcatggtggcgccgaa 488
>gb|BJ258721.1|BJ258721 BJ258721 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh9e16 5', mRNA sequence
Length = 595
Score = 115 bits (58), Expect = 4e-024
Identities = 79/86 (91%)
Strand = Plus / Minus
Query: 544 tcgtgcgccgacggctggctcttcttgatcggcgtcatccaccgccacatcgccgccatg 603
||||||||||||||||| |||||||||| |||||||||||||||||||| |||||| |
Sbjct: 594 tcgtgcgccgacggctgcttcttcttgatgggcgtcatccaccgccacatggccgccgcg 535
Query: 604 aatgccagcgtcgcgttctgctccag 629
|| |||||||||||||||||||||||
Sbjct: 534 aacgccagcgtcgcgttctgctccag 509
>gb|BQ171144.1|BQ171144 WHE2336_B12_D24ZT Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2336_B12_D24, mRNA sequence
Length = 424
Score = 99.6 bits (50), Expect = 2e-019
Identities = 122/146 (83%)
Strand = Plus / Plus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| || |||| |||||||
Sbjct: 279 ggggttgaagggggcctgctcggcgcattcgaggttgaggccggaccgctcccggccgaa 338
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgagattataacgttcatggcgtcgacgta 431
|||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||| | |
Sbjct: 339 gcccatgaggtcgaggtagtactggtagtgggagatgatgacgttcatctcgtcgatgaa 398
Query: 432 tcccttgccgcagatcgactcgccgt 457
||| |||||||||| ||||||||||
Sbjct: 399 gcccctgccgcagatggactcgccgt 424
>gb|BQ237751.1|BQ237751 TaE05012F03F TaE05 Triticum aestivum cDNA clone TaE05012F03F, mRNA
sequence
Length = 621
Score = 87.7 bits (44), Expect = 9e-016
Identities = 92/108 (85%)
Strand = Plus / Plus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| ||| |||| |||||||
Sbjct: 504 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggagcgctcccggccgaa 563
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgagattataacgttcat 419
|||||||||||| ||||| ||||||||||| ||||| || ||||||||
Sbjct: 564 gcccatgaggtcgaggtagtactggtagtgggagatgatgacgttcat 611
>gb|BF201513.1|BF201513 WHE1771_E01_I01ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1771_E01_I01, mRNA sequence
Length = 284
Score = 79.8 bits (40), Expect = 2e-013
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 574 ggcgtcatccaccgccacatcgccgccatgaatgccagcgtcgcgttctgctccag 629
|||||||||||||||||||| |||||| ||| |||||||||||||||||||||||
Sbjct: 281 ggcgtcatccaccgccacatggccgccgcgaacgccagcgtcgcgttctgctccag 226
>gb|CD866041.1|CD866041 AZO2.102G17F001124 AZO2 Triticum aestivum cDNA clone AZO2102G17,
mRNA sequence
Length = 417
Score = 79.8 bits (40), Expect = 2e-013
Identities = 82/96 (85%)
Strand = Plus / Minus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| ||| |||| |||||||
Sbjct: 101 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggagcgctcccggccgaa 42
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgagat 407
|||||||||||| ||||| ||||||||||| |||||
Sbjct: 41 gcccatgaggtcgaggtagtactggtagtgggagat 6
>gb|CD935312.1|CD935312 OV.101E10F010201 OV Triticum aestivum cDNA clone OV101E10, mRNA
sequence
Length = 479
Score = 77.8 bits (39), Expect = 9e-013
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| ||| |||| |||||||
Sbjct: 107 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggagcgctcccggccgaa 48
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgaga 406
|||||||||||| ||||| ||||||||||| ||||
Sbjct: 47 gcccatgaggtcgaggtagtactggtagtgggaga 13
>gb|BJ286226.1|BJ286226 BJ286226 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr19m20 3', mRNA sequence
Length = 432
Score = 73.8 bits (37), Expect = 1e-011
Identities = 88/105 (83%)
Strand = Plus / Plus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| || |||| |||||||
Sbjct: 328 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggaccgctcccggccgaa 387
Query: 372 gcccatgaggtcaaggtaatactggtagtgcgagattataacgtt 416
|||||||||||| ||||| ||||||||||| ||||| || |||||
Sbjct: 388 gcccatgaggtcgaggtagtactggtagtgggagatgatgacgtt 432
>gb|CV522402.1|CV522402 RH-321 Triticum aestivum subtracted, clontech Triticum aestivum
cDNA, mRNA sequence
Length = 324
Score = 52.0 bits (26), Expect = 5e-005
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| || |||| |||||||
Sbjct: 79 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggaccgctcccggccgaa 20
Query: 372 gcccatgaggtcaaggta 389
|||||||||||| |||||
Sbjct: 19 gcccatgaggtcgaggta 2
>gb|CV522443.1|CV522443 RH-624 Triticum aestivum subtracted, clontech Triticum aestivum
cDNA, mRNA sequence
Length = 322
Score = 44.1 bits (22), Expect = 0.012
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 312 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 371
||||||||| || |||||||||||||| || ||||| ||| || |||| ||||||
Sbjct: 78 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggaccgctcccggccgta 19
Query: 372 gcccatgaggtcaaggta 389
|||||||||||| |||||
Sbjct: 18 gcccatgaggtcgaggta 1
>gb|BJ235298.1|BJ235298 BJ235298 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe15p01 5', mRNA sequence
Length = 586
Score = 40.1 bits (20), Expect = 0.19
Identities = 74/92 (80%)
Strand = Plus / Minus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
||||| |||||||| || ||||||||||| || ||||| || || || || ||||| ||
Sbjct: 371 gtgtctttcttggttggtttccagttgccaacaaaggcatcatgggctgatggctgcttc 312
Query: 565 ttcttgatcggcgtcatccaccgccacatcgc 596
|||| || || |||||||||| ||| |||||
Sbjct: 311 ctcttcattggagtcatccacctccagatcgc 280
>gb|BQ243264.1|BQ243264 TaE15017B03F TaE15 Triticum aestivum cDNA clone TaE15017B03F, mRNA
sequence
Length = 553
Score = 40.1 bits (20), Expect = 0.19
Identities = 74/92 (80%)
Strand = Plus / Plus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
||||| |||||||| || ||||||||||| || ||||| || || || || ||||| ||
Sbjct: 449 gtgtctttcttggttggtttccagttgccaacaaaggcatcatgggctgatggctgcttc 508
Query: 565 ttcttgatcggcgtcatccaccgccacatcgc 596
|||| || || |||||||||| ||| |||||
Sbjct: 509 ctcttcattggagtcatccacctccaaatcgc 540
>gb|CK207737.1|CK207737 FGAS019397 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1067
Score = 40.1 bits (20), Expect = 0.19
Identities = 74/92 (80%)
Strand = Plus / Plus
Query: 505 gtgtcgttcttggtgggcttccagttgcccacgaaggcgtcgtgcgccgacggctggctc 564
||||| |||||||| || ||||||||||| || ||||| || || || || ||||| ||
Sbjct: 281 gtgtctttcttggttggtttccagttgccaacaaaggcatcatgggctgatggctgcttc 340
Query: 565 ttcttgatcggcgtcatccaccgccacatcgc 596
|||| || || |||||||||| ||| |||||
Sbjct: 341 ctcttcattggagtcatccacctccagatcgc 372
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 161,584
Number of Sequences: 636343
Number of extensions: 161584
Number of successful extensions: 39914
Number of sequences better than 0.5: 35
Number of HSP's better than 0.5 without gapping: 33
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 39829
Number of HSP's gapped (non-prelim): 59
length of query: 681
length of database: 367,240,239
effective HSP length: 19
effective length of query: 662
effective length of database: 355,149,722
effective search space: 235109115964
effective search space used: 235109115964
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)