BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3128444.2.1
(857 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA625704.1|CA625704 wl1n.pk0133.c11 wl1n Triticum aestiv... 454 e-126
gb|CD490941.1|CD490941 WHE3008_H06_P12ZT Wheat etiolated se... 357 8e-097
gb|BE404125.1|BE404125 WHE1201_E08_I15ZS Wheat etiolated se... 139 4e-031
gb|BQ806804.1|BQ806804 WHE3583_E09_I17ZS Wheat developing g... 139 4e-031
gb|AJ614597.1|AJ614597 AJ614597 Triticum turgidum subsp. du... 139 4e-031
gb|BE444241.1|BE444241 WHE1128_H03_P06ZS Wheat etiolated se... 105 5e-021
gb|BE444242.1|BE444242 WHE1128_H04_P08ZS Wheat etiolated se... 105 5e-021
gb|BE444737.1|BE444737 WHE1138_G04_M08ZS Wheat etiolated se... 105 5e-021
gb|CA644199.1|CA644199 wre1n.pk0078.d5 wre1n Triticum aesti... 105 5e-021
gb|CK195913.1|CK195913 FGAS004359 Triticum aestivum FGAS: L... 105 5e-021
gb|BJ243948.1|BJ243948 BJ243948 Y. Ogihara unpublished cDNA... 101 8e-020
gb|BJ285932.1|BJ285932 BJ285932 Y. Ogihara unpublished cDNA... 101 8e-020
gb|CD373656.1|CD373656 WHE1201_E08_I15ZT CS wheat etiolated... 101 8e-020
gb|CD933933.1|CD933933 GR45.122H21F010721 GR45 Triticum aes... 101 8e-020
gb|CK169970.1|CK169970 FGAS044670 Triticum aestivum FGAS: T... 101 8e-020
gb|CA625452.1|CA625452 wl1n.pk0139.g4 wl1n Triticum aestivu... 92 7e-017
gb|CA625465.1|CA625465 wl1n.pk0139.f3 wl1n Triticum aestivu... 92 7e-017
gb|CK152799.1|CK152799 FGAS035875 Triticum aestivum FGAS: T... 62 7e-008
gb|CK152815.1|CK152815 FGAS035891 Triticum aestivum FGAS: T... 54 2e-005
gb|CK152877.1|CK152877 FGAS035955 Triticum aestivum FGAS: T... 54 2e-005
gb|BE445079.1|BE445079 WHE1131_B08_D15ZS Wheat etiolated se... 48 0.001
gb|BF199673.1|BF199673 WHE0591-0594_I07_I07ZE Triticum mono... 48 0.001
gb|BF473283.1|BF473283 WHE0926_F12_K24ZS Wheat 5-15 DAP spi... 48 0.001
gb|BF483316.1|BF483316 WHE1791_D05_G09ZS Wheat pre-anthesis... 48 0.001
gb|BF484605.1|BF484605 WHE2317_E08_I15ZS Wheat pre-anthesis... 48 0.001
gb|BM138675.1|BM138675 WHE0496_E09_I18ZS Wheat Fusarium gra... 48 0.001
gb|BJ207110.1|BJ207110 BJ207110 Y. Ogihara unpublished cDNA... 48 0.001
gb|BJ208051.1|BJ208051 BJ208051 Y. Ogihara unpublished cDNA... 48 0.001
gb|BJ214392.1|BJ214392 BJ214392 Y. Ogihara unpublished cDNA... 48 0.001
gb|BJ216051.1|BJ216051 BJ216051 Y. Ogihara unpublished cDNA... 48 0.001
gb|BJ218685.1|BJ218685 BJ218685 Y. Ogihara unpublished cDNA... 48 0.001
gb|BJ275023.1|BJ275023 BJ275023 Y. Ogihara unpublished cDNA... 48 0.001
gb|BJ320914.1|BJ320914 BJ320914 Y. Ogihara unpublished cDNA... 48 0.001
gb|BQ483400.1|BQ483400 WHE3508_B06_D12ZS Wheat unstressed r... 48 0.001
gb|BQ803865.1|BQ803865 WHE2843_A03_B05ZS Triticum monococcu... 48 0.001
gb|BU100454.1|BU100454 WHE3353_E04_J07ZS Chinese Spring alu... 48 0.001
gb|BU101199.1|BU101199 WHE3366_A06_B12ZS Chinese Spring alu... 48 0.001
gb|BJ214871.1|BJ214871 BJ214871 Y. Ogihara unpublished cDNA... 48 0.001
gb|BJ252204.1|BJ252204 BJ252204 Y. Ogihara unpublished cDNA... 48 0.001
gb|BJ266826.1|BJ266826 BJ266826 Y. Ogihara unpublished cDNA... 48 0.001
gb|BJ267012.1|BJ267012 BJ267012 Y. Ogihara unpublished cDNA... 48 0.001
gb|BJ272127.1|BJ272127 BJ272127 Y. Ogihara unpublished cDNA... 48 0.001
gb|BJ279176.1|BJ279176 BJ279176 Y. Ogihara unpublished cDNA... 48 0.001
gb|BJ284237.1|BJ284237 BJ284237 Y. Ogihara unpublished cDNA... 48 0.001
gb|BJ286347.1|BJ286347 BJ286347 Y. Ogihara unpublished cDNA... 48 0.001
gb|BJ311537.1|BJ311537 BJ311537 Y. Ogihara unpublished cDNA... 48 0.001
gb|CA614945.1|CA614945 wr1.pk178.g9 wr1 Triticum aestivum c... 48 0.001
gb|CA628775.1|CA628775 wle1n.pk0009.c11 wle1n Triticum aest... 48 0.001
gb|CA632472.1|CA632472 wle1n.pk0059.e1 wle1n Triticum aesti... 48 0.001
gb|CA638913.1|CA638913 wre1n.pk0018.a10 wre1n Triticum aest... 48 0.001
gb|CA652032.1|CA652032 wre1n.pk178.c1 wre1n Triticum aestiv... 48 0.001
gb|CA722123.1|CA722123 wds1c.pk003.n13.f wds1c Triticum mon... 48 0.001
gb|CD373616.1|CD373616 WHE0435_H10_P19ZT CS wheat etiolated... 48 0.001
gb|CD894557.1|CD894557 G118.126I10F010823 G118 Triticum aes... 48 0.001
gb|CD894558.1|CD894558 G118.126I10R011119 G118 Triticum aes... 48 0.001
gb|CD895053.1|CD895053 G118.127N13R011119 G118 Triticum aes... 48 0.001
gb|CD897157.1|CD897157 G174.104P23F010823 G174 Triticum aes... 48 0.001
gb|CD928111.1|CD928111 GR45.104A14F010322 GR45 Triticum aes... 48 0.001
gb|CD929827.1|CD929827 GR45.109E09R010612 GR45 Triticum aes... 48 0.001
gb|CD930608.1|CD930608 GR45.111N11F010418 GR45 Triticum aes... 48 0.001
gb|CD938061.1|CD938061 OV.108P07F010206 OV Triticum aestivu... 48 0.001
gb|CD939143.1|CD939143 OV.112H11F010309 OV Triticum aestivu... 48 0.001
gb|CK153774.1|CK153774 FGAS032431 Triticum aestivum FGAS: T... 48 0.001
gb|CK200839.1|CK200839 FGAS009356 Triticum aestivum FGAS: L... 48 0.001
gb|CK208114.1|CK208114 FGAS019795 Triticum aestivum FGAS: L... 48 0.001
gb|AL810086.1|AL810086 AL810086 d:15 Triticum aestivum cDNA... 48 0.001
gb|AL811907.1|AL811907 AL811907 d:15 Triticum aestivum cDNA... 48 0.001
gb|CV064525.1|CV064525 WNEL12a12 Wheat EST endosperm librar... 48 0.001
gb|CV780327.1|CV780327 FGAS074736 Triticum aestivum FGAS: L... 48 0.001
gb|CV781981.1|CV781981 FGAS076394 Triticum aestivum FGAS: L... 48 0.001
gb|DN828918.1|DN828918 KUCD01_02_D11_T3 WSWR cDNA library T... 48 0.001
gb|BT009232.1| Triticum aestivum clone wle1n.pk0102.g9:fis,... 48 0.001
gb|BJ262884.1|BJ262884 BJ262884 Y. Ogihara unpublished cDNA... 44 0.016
gb|BJ265015.1|BJ265015 BJ265015 Y. Ogihara unpublished cDNA... 44 0.016
gb|BJ265356.1|BJ265356 BJ265356 Y. Ogihara unpublished cDNA... 44 0.016
gb|BJ315409.1|BJ315409 BJ315409 Y. Ogihara unpublished cDNA... 44 0.016
gb|BJ245712.1|BJ245712 BJ245712 Y. Ogihara unpublished cDNA... 44 0.016
gb|BJ251600.1|BJ251600 BJ251600 Y. Ogihara unpublished cDNA... 44 0.016
gb|BJ263736.1|BJ263736 BJ263736 Y. Ogihara unpublished cDNA... 44 0.016
gb|BJ265899.1|BJ265899 BJ265899 Y. Ogihara unpublished cDNA... 44 0.016
gb|BJ265907.1|BJ265907 BJ265907 Y. Ogihara unpublished cDNA... 44 0.016
gb|CA596301.1|CA596301 wpa1c.pk012.o23 wpa1c Triticum aesti... 44 0.016
gb|BJ254624.2|BJ254624 BJ254624 Y. Ogihara unpublished cDNA... 44 0.016
gb|CA594383.1|CA594383 wpa1c.pk006.h19 wpa1c Triticum aesti... 42 0.062
gb|CA722009.1|CA722009 wds1c.pk001.l4.f wds1c Triticum mono... 42 0.062
gb|CA722128.1|CA722128 wds1c.pk003.m6.f wds1c Triticum mono... 42 0.062
gb|CD454581.1|CD454581 WHE2328_C01_F02ZT CS wheat pre-anthe... 42 0.062
gb|BQ295018.1|BQ295018 WHE2857_D02_H03ZS Wheat unstressed r... 40 0.25
gb|BQ839069.1|BQ839069 WHE3589_A05_B09ZS Wheat developing g... 40 0.25
gb|CA651587.1|CA651587 wre1n.pk176.e5 wre1n Triticum aestiv... 40 0.25
gb|CA714922.1|CA714922 wdk3c.pk021.p8 wdk3c Triticum aestiv... 40 0.25
gb|CD904301.1|CD904301 G356.113B20F010920 G356 Triticum aes... 40 0.25
gb|CD911938.1|CD911938 G550.112L03R010831 G550 Triticum aes... 40 0.25
gb|CD913156.1|CD913156 G550.116P18F010525 G550 Triticum aes... 40 0.25
gb|CD913157.1|CD913157 G550.116P18R010920 G550 Triticum aes... 40 0.25
gb|CD916238.1|CD916238 G550.129N10R010921 G550 Triticum aes... 40 0.25
gb|CD920412.1|CD920412 G608.117A02R011030 G608 Triticum aes... 40 0.25
gb|CK208206.1|CK208206 FGAS019890 Triticum aestivum FGAS: L... 40 0.25
gb|AL810577.1|AL810577 AL810577 e:29 Triticum aestivum cDNA... 40 0.25
>gb|CA625704.1|CA625704 wl1n.pk0133.c11 wl1n Triticum aestivum cDNA clone wl1n.pk0133.c11
5' end, mRNA sequence
Length = 286
Score = 454 bits (229), Expect = e-126
Identities = 274/285 (96%), Gaps = 3/285 (1%)
Strand = Plus / Plus
Query: 315 gcttgtcatagttccttggggccttcataaattacttaactatatagtgaagaaatacaa 374
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 1 gcttgtcatagttccttggggccttcacaaattgcttaactatatagtgaagaaatacaa 60
Query: 375 cagtccagtaatttatgttactgagaatggcatggatgatgaagacgatcaatccgcaac 434
|| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 61 caacccagtaatttatgttactgagaatggcatggatgatgaagacgatcagtccgcgac 120
Query: 435 gattgaccaggtcctaaacgacacgaagagagtcggctacttcaacggatacctcaattc 494
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 121 gattgaccaggtcctaaacgacacgaagagagtcggctacttcaaaggatacctcaattc 180
Query: 495 ggttgcgcaggcgatcaaggacggggctgatgtccgtgggtacttcgcgtggtcattcct 554
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggttgcacaggcgatcaaggacggggctgatgtccgtgggtacttcgcgtggtcattcct 240
Query: 555 ggacaacttcgagt-gggctat-gggctacaccaa-gaggttcgg 596
|||||||||||||| ||||||| |||||||||||| |||||||||
Sbjct: 241 ggacaacttcgagtggggctatggggctacaccaaggaggttcgg 285
>gb|CD490941.1|CD490941 WHE3008_H06_P12ZT Wheat etiolated seedling shoot normalized cDNA
library Triticum aestivum cDNA clone WHE3008_H06_P12,
mRNA sequence
Length = 745
Score = 357 bits (180), Expect = 8e-097
Identities = 264/292 (90%)
Strand = Plus / Minus
Query: 403 ggcatggatgatgaagacgatcaatccgcaacgattgaccaggtcctaaacgacacgaag 462
||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||
Sbjct: 541 ggcatggatgatgaagatgatcaatccgcaacacttgaccaggtcctaaatgacacgaca 482
Query: 463 agagtcggctacttcaacggatacctcaattcggttgcgcaggcgatcaaggacggggct 522
|||||||| |||||||| |||||||||||||| ||||| || || ||||||||||| |||
Sbjct: 481 agagtcggttacttcaaaggatacctcaattcagttgcacaagccatcaaggacggagct 422
Query: 523 gatgtccgtgggtacttcgcgtggtcattcctggacaacttcgagtgggctatgggctac 582
||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 421 gatatccgtgggtactttgcgtggtcattcctggacaactttgagtgggctatgggctac 362
Query: 583 accaagaggttcggcatagtctacgtcgattacaaggacgggctctccaggcaccccaag 642
||||||||||| || ||||| ||||||||||||||| | ||||| |||||||| || ||
Sbjct: 361 accaagaggtttggtatagtttacgtcgattacaagaatgggctgtccaggcatcctaaa 302
Query: 643 gcatcggccctctggttctcgcgcctcctcaagggcgaggctgccgaaaaca 694
||||||||||| |||||||||||| |||| ||||||||||||||||||||||
Sbjct: 301 gcatcggccctgtggttctcgcgcttcctgaagggcgaggctgccgaaaaca 250
>gb|BE404125.1|BE404125 WHE1201_E08_I15ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1201_E08_I15, mRNA
sequence
Length = 595
Score = 139 bits (70), Expect = 4e-031
Identities = 136/158 (86%)
Strand = Plus / Plus
Query: 34 attgactttcaacttggatggtacctagatccaatatattttggtgattacccagaaagc 93
|||||||||||||||||||||| ||| || |||||||| |||||||||||||||||||||
Sbjct: 45 attgactttcaacttggatggttcctggacccaatatactttggtgattacccagaaagc 104
Query: 94 atgcgtcagcgactgggcagtgatcttccaaccttctcagagaaagataaagaattcatc 153
||||| ||| || ||||| ||||||||| ||||| |||||||| ||||| ||
Sbjct: 105 atgcgccagagagtgggcgaatatcttccaaaattctcggagaaagaccgtgaattgatg 164
Query: 154 aggaacaaaattgattttattggactaaatcattatac 191
|||||||||||||||||||||||| ||||||| |||||
Sbjct: 165 aggaacaaaattgattttattggattaaatcactatac 202
Score = 105 bits (53), Expect = 5e-021
Identities = 146/177 (82%)
Strand = Plus / Plus
Query: 248 aacaaatggagagagtagaaaaatggagtagtggtgaaagcatcggtgaaagggctgcat 307
||||||| |||||| ||||||||||||||| |||||| || |||||||| ||||| |
Sbjct: 265 aacaaatagagagatcagaaaaatggagtagcggtgaagcaattggtgaaagagctgcgt 324
Query: 308 ctgaatggcttgtcatagttccttggggccttcataaattacttaactatatagtgaaga 367
|||| |||||| | |||||||||||||| ||| ||| | | || |||||||| ||||
Sbjct: 325 ctgagtggcttttaatagttccttggggtattcggaaaacaatcaattatatagtaaaga 384
Query: 368 aatacaacagtccagtaatttatgttactgagaatggcatggatgatgaagacgatc 424
||||| | | |||| |||| ||||| || ||||||||||||||||| ||||||||||
Sbjct: 385 aatacgaaaatccaataatatatgtaacagagaatggcatggatgacgaagacgatc 441
>gb|BQ806804.1|BQ806804 WHE3583_E09_I17ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3583_E09_I17, mRNA sequence
Length = 742
Score = 139 bits (70), Expect = 4e-031
Identities = 136/158 (86%)
Strand = Plus / Plus
Query: 34 attgactttcaacttggatggtacctagatccaatatattttggtgattacccagaaagc 93
|||||||||||||||||||||| ||| || |||||||| |||||||||||||||||||||
Sbjct: 451 attgactttcaacttggatggttcctggacccaatatactttggtgattacccagaaagc 510
Query: 94 atgcgtcagcgactgggcagtgatcttccaaccttctcagagaaagataaagaattcatc 153
||||| ||| || ||||| ||||||||| ||||| |||||||| ||||| ||
Sbjct: 511 atgcgccagagagtgggcgaatatcttccaaaattctctgagaaagaccgtgaattgatg 570
Query: 154 aggaacaaaattgattttattggactaaatcattatac 191
|||||||||||||||||||||||| ||||||| |||||
Sbjct: 571 aggaacaaaattgattttattggattaaatcactatac 608
Score = 48.1 bits (24), Expect = 0.001
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 247 caacaaatggagagagtagaaaaatggagtagtggtgaaagcatcggtgaaagggctgca 306
|||||||| |||||| ||| ||||||||||| |||||| || |||||||| |||||
Sbjct: 670 caacaaatagagagaacagacaaatggagtagcggtgaagcaattggtgaaagagctgcg 729
Query: 307 tctgaatggctt 318
||||| ||||||
Sbjct: 730 tctgagtggctt 741
>gb|AJ614597.1|AJ614597 AJ614597 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 10482R, mRNA
sequence
Length = 727
Score = 139 bits (70), Expect = 4e-031
Identities = 136/158 (86%)
Strand = Plus / Plus
Query: 34 attgactttcaacttggatggtacctagatccaatatattttggtgattacccagaaagc 93
|||||||||||||||||||||| ||| || |||||||| |||||||||||||||||||||
Sbjct: 241 attgactttcaacttggatggttcctggacccaatatactttggtgattacccagaaagc 300
Query: 94 atgcgtcagcgactgggcagtgatcttccaaccttctcagagaaagataaagaattcatc 153
||||| ||| || ||||| ||||||||| ||||| |||||||| ||||| ||
Sbjct: 301 atgcgccagagagtgggcgaatatcttccaaaattctctgagaaagaccgtgaattgatg 360
Query: 154 aggaacaaaattgattttattggactaaatcattatac 191
|||||||||||||||||||||||| ||||||| |||||
Sbjct: 361 aggaacaaaattgattttattggattaaatcactatac 398
Score = 83.8 bits (42), Expect = 2e-014
Identities = 144/178 (80%)
Strand = Plus / Plus
Query: 247 caacaaatggagagagtagaaaaatggagtagtggtgaaagcatcggtgaaagggctgca 306
|||||||| |||||| ||| ||||||||||| |||||| || |||||||| |||||
Sbjct: 460 caacaaatagagagaacagacaaatggagtagcggtgaagcaattggtgaaagagctgcg 519
Query: 307 tctgaatggcttgtcatagttccttggggccttcataaattacttaactatatagtgaag 366
||||| |||||| | |||||||| ||||| ||| ||| | | || |||||||| |||
Sbjct: 520 tctgagtggcttttaatagttccctggggtattcggaaaacaatcaattatatagtaaag 579
Query: 367 aaatacaacagtccagtaatttatgttactgagaatggcatggatgatgaagacgatc 424
||||| | | |||| |||| ||||| || ||||||||||||||||| ||||||||||
Sbjct: 580 aaatatgaaaatccaataatatatgtaacagagaatggcatggatgacgaagacgatc 637
>gb|BE444241.1|BE444241 WHE1128_H03_P06ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1128_H03_P06,
mRNA sequence
Length = 645
Score = 105 bits (53), Expect = 5e-021
Identities = 134/161 (83%)
Strand = Plus / Plus
Query: 523 gatgtccgtgggtacttcgcgtggtcattcctggacaacttcgagtgggctatgggctac 582
||||| ||||| ||||| || ||||||||| |||| ||||| |||||||| ||||| | |
Sbjct: 153 gatgttcgtggatactttgcatggtcattcgtggataactttgagtgggcgatgggattc 212
Query: 583 accaagaggttcggcatagtctacgtcgattacaaggacgggctctccaggcaccccaag 642
||||||||||| || || ||||| || ||||||||| ||||||||||| ||| ||| ||
Sbjct: 213 accaagaggtttgggattgtctatgttgattacaagaacgggctctcccggcgccctaaa 272
Query: 643 gcatcggccctctggttctcgcgcctcctcaagggcgaggc 683
||||| ||| | |||||||||||| || | || ||||||||
Sbjct: 273 gcatcagccatgtggttctcgcgcttcttgaacggcgaggc 313
Score = 48.1 bits (24), Expect = 0.001
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 397 gagaatggcatggatgatgaagacgatc 424
||||||||||||||||| ||||||||||
Sbjct: 27 gagaatggcatggatgacgaagacgatc 54
>gb|BE444242.1|BE444242 WHE1128_H04_P08ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1128_H04_P08,
mRNA sequence
Length = 539
Score = 105 bits (53), Expect = 5e-021
Identities = 134/161 (83%)
Strand = Plus / Plus
Query: 523 gatgtccgtgggtacttcgcgtggtcattcctggacaacttcgagtgggctatgggctac 582
||||| ||||| ||||| || ||||||||| |||| ||||| |||||||| ||||| | |
Sbjct: 181 gatgttcgtggatactttgcatggtcattcgtggataactttgagtgggcgatgggattc 240
Query: 583 accaagaggttcggcatagtctacgtcgattacaaggacgggctctccaggcaccccaag 642
||||||||||| || || ||||| || ||||||||| ||||||||||| ||| ||| ||
Sbjct: 241 accaagaggtttgggattgtctatgttgattacaagaacgggctctcccggcgccctaaa 300
Query: 643 gcatcggccctctggttctcgcgcctcctcaagggcgaggc 683
||||| ||| | |||||||||||| || | || ||||||||
Sbjct: 301 gcatcagccatgtggttctcgcgcttcttgaacggcgaggc 341
Score = 48.1 bits (24), Expect = 0.001
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 397 gagaatggcatggatgatgaagacgatc 424
||||||||||||||||| ||||||||||
Sbjct: 55 gagaatggcatggatgacgaagacgatc 82
>gb|BE444737.1|BE444737 WHE1138_G04_M08ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1138_G04_M08,
mRNA sequence
Length = 555
Score = 105 bits (53), Expect = 5e-021
Identities = 134/161 (83%)
Strand = Plus / Plus
Query: 523 gatgtccgtgggtacttcgcgtggtcattcctggacaacttcgagtgggctatgggctac 582
||||| ||||| ||||| || ||||||||| |||| ||||| |||||||| ||||| | |
Sbjct: 197 gatgttcgtggatactttgcatggtcattcgtggataactttgagtgggcgatgggattc 256
Query: 583 accaagaggttcggcatagtctacgtcgattacaaggacgggctctccaggcaccccaag 642
||||||||||| || || ||||| || ||||||||| ||||||||||| ||| ||| ||
Sbjct: 257 accaagaggtttgggattgtctatgttgattacaagaacgggctctcccggcgccctaaa 316
Query: 643 gcatcggccctctggttctcgcgcctcctcaagggcgaggc 683
||||| ||| | |||||||||||| || | || ||||||||
Sbjct: 317 gcatcagccatgtggttctcgcgcttcttgaacggcgaggc 357
Score = 48.1 bits (24), Expect = 0.001
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 397 gagaatggcatggatgatgaagacgatc 424
||||||||||||||||| ||||||||||
Sbjct: 71 gagaatggcatggatgacgaagacgatc 98
>gb|CA644199.1|CA644199 wre1n.pk0078.d5 wre1n Triticum aestivum cDNA clone wre1n.pk0078.d5
5' end, mRNA sequence
Length = 583
Score = 105 bits (53), Expect = 5e-021
Identities = 134/161 (83%)
Strand = Plus / Plus
Query: 523 gatgtccgtgggtacttcgcgtggtcattcctggacaacttcgagtgggctatgggctac 582
||||| ||||| ||||| || ||||||||| |||| ||||| |||||||| ||||| | |
Sbjct: 119 gatgttcgtggatactttgcatggtcattcgtggataactttgagtgggcgatgggattc 178
Query: 583 accaagaggttcggcatagtctacgtcgattacaaggacgggctctccaggcaccccaag 642
||||||||||| || || ||||| || ||||||||| ||||||||||| ||| ||| ||
Sbjct: 179 accaagaggtttgggattgtctatgttgattacaagaacgggctctcccggcgccctaaa 238
Query: 643 gcatcggccctctggttctcgcgcctcctcaagggcgaggc 683
||||| ||| | |||||||||||| || | || ||||||||
Sbjct: 239 gcatcagccatgtggttctcgcgcttcttgaacggcgaggc 279
>gb|CK195913.1|CK195913 FGAS004359 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 814
Score = 105 bits (53), Expect = 5e-021
Identities = 146/177 (82%)
Strand = Plus / Plus
Query: 248 aacaaatggagagagtagaaaaatggagtagtggtgaaagcatcggtgaaagggctgcat 307
||||||| |||||| ||||||||||||||| |||||| || |||||||| ||||| |
Sbjct: 290 aacaaatagagagatcagaaaaatggagtagcggtgaagcaattggtgaaagagctgcgt 349
Query: 308 ctgaatggcttgtcatagttccttggggccttcataaattacttaactatatagtgaaga 367
|||| |||||| | |||||||||||||| ||| ||| | | || |||||||| ||||
Sbjct: 350 ctgagtggcttttaatagttccttggggtattcggaaaacaatcaattatatagtaaaga 409
Query: 368 aatacaacagtccagtaatttatgttactgagaatggcatggatgatgaagacgatc 424
||||| | | |||| |||| ||||| || ||||||||||||||||| ||||||||||
Sbjct: 410 aatacgaaaatccaataatatatgtaacagagaatggcatggatgacgaagacgatc 466
Score = 93.7 bits (47), Expect = 2e-017
Identities = 120/143 (83%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 523 gatgtccgtgggtacttcgcgtggtcattcctggacaacttcgagtgggctatgggctac 582
||||| ||||| ||||| || ||||||||| |||| ||||| |||||||| ||||| | |
Sbjct: 565 gatgttcgtggatactttgcatggtcattcgtggataactttgagtgggcgatgggat-c 623
Query: 583 accaagaggttcggcatagtctacgtcgattacaaggacgggctctccaggcaccccaag 642
||||||||||| || || ||||| || ||||||||| |||||||||| | ||||| ||
Sbjct: 624 accaagaggtttgggattgtctatgttgattacaagaacgggctctcacgacaccctaaa 683
Query: 643 gcatcggccctctggttctcgcg 665
||||||||| | |||||||||||
Sbjct: 684 gcatcggccatgtggttctcgcg 706
Score = 87.7 bits (44), Expect = 1e-015
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 76 ggtgattacccagaaagcatgcgtcagcgactgggcagtgatcttccaaccttctcagag 135
||||||||||||||||||||||| ||| || ||||| ||||||||| ||||| |||
Sbjct: 112 ggtgattacccagaaagcatgcgccagagagtgggcgaatatcttccaaaattctcggag 171
Query: 136 aaagataaagaattcatcaggaacaaaattgattttattggactaaatcattatac 191
||||| ||||| || |||||||||||||||||||||||| ||||||| |||||
Sbjct: 172 aaagaccgtgaattgatgaggaacaaaattgattttattggattaaatcactatac 227
>gb|BJ243948.1|BJ243948 BJ243948 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf13i05 5', mRNA sequence
Length = 665
Score = 101 bits (51), Expect = 8e-020
Identities = 93/107 (86%)
Strand = Plus / Plus
Query: 34 attgactttcaacttggatggtacctagatccaatatattttggtgattacccagaaagc 93
|||||||||||||||||||||| ||| || |||||||| |||||||||||||||||||||
Sbjct: 538 attgactttcaacttggatggttcctggacccaatatactttggtgattacccagaaagc 597
Query: 94 atgcgtcagcgactgggcagtgatcttccaaccttctcagagaaaga 140
||||| ||| || ||||| ||||||||| ||||| ||||||||
Sbjct: 598 atgcgccagagagtgggcgaatatcttccaaaattctcggagaaaga 644
>gb|BJ285932.1|BJ285932 BJ285932 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr13i05 3', mRNA sequence
Length = 733
Score = 101 bits (51), Expect = 8e-020
Identities = 120/143 (83%)
Strand = Plus / Minus
Query: 523 gatgtccgtgggtacttcgcgtggtcattcctggacaacttcgagtgggctatgggctac 582
||||| ||||| ||||| || ||||||||| |||| ||||| |||||||| ||||| | |
Sbjct: 563 gatgttcgtggatactttgcatggtcattcgtggataactttgagtgggcgatgggattc 504
Query: 583 accaagaggttcggcatagtctacgtcgattacaaggacgggctctccaggcaccccaag 642
||||||||||| || || ||||| || ||||||||| |||||||||| | ||||| ||
Sbjct: 503 accaagaggtttgggattgtctatgttgattacaagaacgggctctcacgacaccctaaa 444
Query: 643 gcatcggccctctggttctcgcg 665
||||||||| | |||||||||||
Sbjct: 443 gcatcggccatgtggttctcgcg 421
Score = 61.9 bits (31), Expect = 7e-008
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 355 tatatagtgaagaaatac-aacagtccagtaatttatgttactgagaatggcatggatga 413
|||||||| ||||||||| || | |||| |||| ||||| || |||||||||||||||||
Sbjct: 733 tatatagtaaagaaatacgaaaaatccaataatatatgtaacagagaatggcatggatga 674
Query: 414 tgaagacgatc 424
||||||||||
Sbjct: 673 cgaagacgatc 663
>gb|CD373656.1|CD373656 WHE1201_E08_I15ZT CS wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1201_E08_I15, mRNA
sequence
Length = 766
Score = 101 bits (51), Expect = 8e-020
Identities = 120/143 (83%)
Strand = Plus / Minus
Query: 523 gatgtccgtgggtacttcgcgtggtcattcctggacaacttcgagtgggctatgggctac 582
||||| ||||| ||||| || ||||||||| |||| ||||| |||||||| ||||| | |
Sbjct: 723 gatgttcgtggatactttgcatggtcattcgtggataactttgagtgggcgatgggattc 664
Query: 583 accaagaggttcggcatagtctacgtcgattacaaggacgggctctccaggcaccccaag 642
||||||||||| || || ||||| || ||||||||| |||||||||| | ||||| ||
Sbjct: 663 accaagaggtttgggattgtctatgttgattacaagaacgggctctcacgacaccctaaa 604
Query: 643 gcatcggccctctggttctcgcg 665
||||||||| | |||||||||||
Sbjct: 603 gcatcggccatgtggttctcgcg 581
>gb|CD933933.1|CD933933 GR45.122H21F010721 GR45 Triticum aestivum cDNA clone GR45122H21,
mRNA sequence
Length = 549
Score = 101 bits (51), Expect = 8e-020
Identities = 120/143 (83%)
Strand = Plus / Plus
Query: 523 gatgtccgtgggtacttcgcgtggtcattcctggacaacttcgagtgggctatgggctac 582
||||| ||||| ||||| || ||||||||| |||| ||||| |||||||| ||||| | |
Sbjct: 46 gatgttcgtggatactttgcatggtcattcgtggataactttgagtgggcgatgggattc 105
Query: 583 accaagaggttcggcatagtctacgtcgattacaaggacgggctctccaggcaccccaag 642
||||||||||| || || ||||| || ||||||||| |||||||||| | ||||| ||
Sbjct: 106 accaagaggtttgggattgtctatgttgattacaagaacgggctctcacgacaccctaaa 165
Query: 643 gcatcggccctctggttctcgcg 665
||||||||| | |||||||||||
Sbjct: 166 gcatcggccatgtggttctcgcg 188
>gb|CK169970.1|CK169970 FGAS044670 Triticum aestivum FGAS: TaLt6 Triticum aestivum cDNA,
mRNA sequence
Length = 1174
Score = 101 bits (51), Expect = 8e-020
Identities = 120/143 (83%)
Strand = Plus / Plus
Query: 523 gatgtccgtgggtacttcgcgtggtcattcctggacaacttcgagtgggctatgggctac 582
||||| ||||| ||||| || ||||||||| |||| ||||| |||||||| ||||| | |
Sbjct: 193 gatgttcgtggatactttgcatggtcattcgtggataactttgagtgggcgatgggattc 252
Query: 583 accaagaggttcggcatagtctacgtcgattacaaggacgggctctccaggcaccccaag 642
||||||||||| || || ||||| || ||||||||| |||||||||| | ||||| ||
Sbjct: 253 accaagaggtttgggattgtctatgttgattacaagaacgggctctcacgacaccctaaa 312
Query: 643 gcatcggccctctggttctcgcg 665
||||||||| | |||||||||||
Sbjct: 313 gcatcggccatgtggttctcgcg 335
>gb|CA625452.1|CA625452 wl1n.pk0139.g4 wl1n Triticum aestivum cDNA clone wl1n.pk0139.g4 5'
end, mRNA sequence
Length = 537
Score = 91.7 bits (46), Expect = 7e-017
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 529 cgtgggtacttcgcgtggtcattcctggacaacttcgagtgggctatgggctacaccaag 588
||||| ||||| || |||||||||||||| ||||| |||||||| ||||| | |||||||
Sbjct: 116 cgtggatactttgcatggtcattcctggataactttgagtgggcgatgggattcaccaag 175
Query: 589 aggttcggcatagtctacgtcgattacaaggacgggctctccaggcaccccaaggcatcg 648
||||| || || ||||| || ||||||||| |||||||| || | ||||| || |||||
Sbjct: 176 aggtttgggattgtctatgttgattacaagaacgggctcacccgacaccctaaagcatca 235
Query: 649 gccctctggttctc 662
||| | ||||||||
Sbjct: 236 gccatgtggttctc 249
>gb|CA625465.1|CA625465 wl1n.pk0139.f3 wl1n Triticum aestivum cDNA clone wl1n.pk0139.f3 5'
end, mRNA sequence
Length = 542
Score = 91.7 bits (46), Expect = 7e-017
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 529 cgtgggtacttcgcgtggtcattcctggacaacttcgagtgggctatgggctacaccaag 588
||||| ||||| || |||||||||||||| ||||| |||||||| ||||| | |||||||
Sbjct: 116 cgtggatactttgcatggtcattcctggataactttgagtgggcgatgggattcaccaag 175
Query: 589 aggttcggcatagtctacgtcgattacaaggacgggctctccaggcaccccaaggcatcg 648
||||| || || ||||| || ||||||||| |||||||| || | ||||| || |||||
Sbjct: 176 aggtttgggattgtctatgttgattacaagaacgggctcacccgacaccctaaagcatca 235
Query: 649 gccctctggttctc 662
||| | ||||||||
Sbjct: 236 gccatgtggttctc 249
>gb|CK152799.1|CK152799 FGAS035875 Triticum aestivum FGAS: TaLt3 Triticum aestivum cDNA,
mRNA sequence
Length = 867
Score = 61.9 bits (31), Expect = 7e-008
Identities = 84/102 (82%)
Strand = Plus / Minus
Query: 565 gagtgggctatgggctacaccaagaggttcggcatagtctacgtcgattacaaggacggg 624
|||||||| ||||| | |||||||||||| || || || || || |||||||| |||||
Sbjct: 794 gagtgggcgatgggattcaccaagaggtttgggatggtntatgtgaattacaagaacggg 735
Query: 625 ctctccaggcaccccaaggcatcggccctctggttctcgcgc 666
|||||| ||| ||| || ||||| ||| | ||||||||||||
Sbjct: 734 ctctcccggcgccctaaagcatcagccatgtggttctcgcgc 693
>gb|CK152815.1|CK152815 FGAS035891 Triticum aestivum FGAS: TaLt3 Triticum aestivum cDNA,
mRNA sequence
Length = 848
Score = 54.0 bits (27), Expect = 2e-005
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 611 attacaaggacgggctctccaggcaccccaaggcatcggccctctggttctcgcgcctcc 670
|||||||| ||||||||||| ||| ||| || ||||| ||| | |||||||||||| ||
Sbjct: 678 attacaagaacgggctctcccggcgccctaaagcatcagccatgtggttctcgcgcttct 619
Query: 671 tcaagggcgaggctgccga 689
| || |||||||| |||||
Sbjct: 618 tgaacggcgaggccgccga 600
>gb|CK152877.1|CK152877 FGAS035955 Triticum aestivum FGAS: TaLt3 Triticum aestivum cDNA,
mRNA sequence
Length = 907
Score = 54.0 bits (27), Expect = 2e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 523 gatgtccgtgggtacttcgcgtggtcattcctggacaacttcgagtgggctatgggctac 582
||||| ||||| ||||| || ||||||||| |||| ||||| |||||||| |||| | |
Sbjct: 765 gatgttcgtggatactttgcatggtcattcgtggataactttgagtgggcgatggaattc 706
Query: 583 accaagaggtt 593
|||||||||||
Sbjct: 705 accaagaggtt 695
>gb|BE445079.1|BE445079 WHE1131_B08_D15ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1131_B08_D15,
mRNA sequence
Length = 509
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
|||||||||||||| |||| |||||||||||||||
Sbjct: 415 tacttcgcgtggtctctcctcgacaacttcgagtgg 450
>gb|BF199673.1|BF199673 WHE0591-0594_I07_I07ZE Triticum monococcum vegetative apex cDNA
library Triticum monococcum cDNA clone
WHE0591-0594_I07_I07, mRNA sequence
Length = 452
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
|||||||||||||| |||| |||||||||||||||
Sbjct: 236 tacttcgcgtggtctctcctcgacaacttcgagtgg 271
>gb|BF473283.1|BF473283 WHE0926_F12_K24ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0926_F12_K24, mRNA sequence
Length = 592
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
||||| |||||||| ||||||||||||||||||||
Sbjct: 271 tactttgcgtggtccctcctggacaacttcgagtgg 306
>gb|BF483316.1|BF483316 WHE1791_D05_G09ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1791_D05_G09, mRNA sequence
Length = 553
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
||||| |||||||| ||||||||||||||||||||
Sbjct: 363 tactttgcgtggtccctcctggacaacttcgagtgg 398
>gb|BF484605.1|BF484605 WHE2317_E08_I15ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2317_E08_I15, mRNA sequence
Length = 532
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
|||||||||||||| |||| |||||||||||||||
Sbjct: 192 tacttcgcgtggtctctcctcgacaacttcgagtgg 227
>gb|BM138675.1|BM138675 WHE0496_E09_I18ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0496_E09_I18,
mRNA sequence
Length = 533
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
||||| |||||||| ||||||||||||||||||||
Sbjct: 249 tactttgcgtggtccctcctggacaacttcgagtgg 284
>gb|BJ207110.1|BJ207110 BJ207110 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh2c22 5', mRNA sequence
Length = 598
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
||||| |||||||| ||||||||||||||||||||
Sbjct: 208 tactttgcgtggtccctcctggacaacttcgagtgg 243
>gb|BJ208051.1|BJ208051 BJ208051 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh6j23 5', mRNA sequence
Length = 621
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
||||| |||||||| ||||||||||||||||||||
Sbjct: 83 tactttgcgtggtccctcctggacaacttcgagtgg 118
>gb|BJ214392.1|BJ214392 BJ214392 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh2c22 3', mRNA sequence
Length = 610
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
||||| |||||||| ||||||||||||||||||||
Sbjct: 521 tactttgcgtggtccctcctggacaacttcgagtgg 486
>gb|BJ216051.1|BJ216051 BJ216051 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh9l07 3', mRNA sequence
Length = 586
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
|||||||||||||| |||| |||||||||||||||
Sbjct: 190 tacttcgcgtggtctctcctcgacaacttcgagtgg 155
>gb|BJ218685.1|BJ218685 BJ218685 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh9e23 3', mRNA sequence
Length = 735
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
||||| |||||||| ||||||||||||||||||||
Sbjct: 449 tactttgcgtggtccctcctggacaacttcgagtgg 414
>gb|BJ275023.1|BJ275023 BJ275023 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh5m05 3', mRNA sequence
Length = 720
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
|||||||||||||| |||| |||||||||||||||
Sbjct: 247 tacttcgcgtggtctctcctcgacaacttcgagtgg 212
>gb|BJ320914.1|BJ320914 BJ320914 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf18e01 3', mRNA sequence
Length = 541
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
||||| |||||||| ||||||||||||||||||||
Sbjct: 391 tactttgcgtggtccctcctggacaacttcgagtgg 356
>gb|BQ483400.1|BQ483400 WHE3508_B06_D12ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3508_B06_D12, mRNA sequence
Length = 717
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
|||||||||||||| |||| |||||||||||||||
Sbjct: 504 tacttcgcgtggtctctcctcgacaacttcgagtgg 539
>gb|BQ803865.1|BQ803865 WHE2843_A03_B05ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2843_A03_B05, mRNA
sequence
Length = 510
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
|||||||||||||| |||| |||||||||||||||
Sbjct: 344 tacttcgcgtggtctctcctcgacaacttcgagtgg 379
>gb|BU100454.1|BU100454 WHE3353_E04_J07ZS Chinese Spring aluminum-stressed root tip cDNA
library Triticum aestivum cDNA clone WHE3353_E04_J07,
mRNA sequence
Length = 731
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
|||||||||||||| |||| |||||||||||||||
Sbjct: 608 tacttcgcgtggtctctcctcgacaacttcgagtgg 643
>gb|BU101199.1|BU101199 WHE3366_A06_B12ZS Chinese Spring aluminum-stressed root tip cDNA
library Triticum aestivum cDNA clone WHE3366_A06_B12,
mRNA sequence
Length = 416
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
|||||||||||||| |||| |||||||||||||||
Sbjct: 89 tacttcgcgtggtctctcctcgacaacttcgagtgg 124
>gb|BJ214871.1|BJ214871 BJ214871 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh4h17 3', mRNA sequence
Length = 694
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
|||||||||||||| |||| |||||||||||||||
Sbjct: 315 tacttcgcgtggtctctcctcgacaacttcgagtgg 280
>gb|BJ252204.1|BJ252204 BJ252204 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf22d13 3', mRNA sequence
Length = 605
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
|||||||||||||| |||| |||||||||||||||
Sbjct: 266 tacttcgcgtggtctctcctcgacaacttcgagtgg 231
>gb|BJ266826.1|BJ266826 BJ266826 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh2e01 5', mRNA sequence
Length = 450
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
|||||||||||||| |||| |||||||||||||||
Sbjct: 118 tacttcgcgtggtctctcctcgacaacttcgagtgg 153
>gb|BJ267012.1|BJ267012 BJ267012 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh3e01 5', mRNA sequence
Length = 401
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
|||||||||||||| |||| |||||||||||||||
Sbjct: 138 tacttcgcgtggtctctcctcgacaacttcgagtgg 173
>gb|BJ272127.1|BJ272127 BJ272127 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh3e01 3', mRNA sequence
Length = 438
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
|||||||||||||| |||| |||||||||||||||
Sbjct: 313 tacttcgcgtggtctctcctcgacaacttcgagtgg 278
>gb|BJ279176.1|BJ279176 BJ279176 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr1k03 5', mRNA sequence
Length = 533
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
|||||||||||||| |||| |||||||||||||||
Sbjct: 346 tacttcgcgtggtctctcctcgacaacttcgagtgg 381
>gb|BJ284237.1|BJ284237 BJ284237 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr1k03 3', mRNA sequence
Length = 592
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
|||||||||||||| |||| |||||||||||||||
Sbjct: 232 tacttcgcgtggtctctcctcgacaacttcgagtgg 197
>gb|BJ286347.1|BJ286347 BJ286347 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr21f09 3', mRNA sequence
Length = 747
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
|||||||||||||| |||| |||||||||||||||
Sbjct: 273 tacttcgcgtggtctctcctcgacaacttcgagtgg 238
>gb|BJ311537.1|BJ311537 BJ311537 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd28e11 3', mRNA sequence
Length = 610
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
|||||||||||||| |||| |||||||||||||||
Sbjct: 229 tacttcgcgtggtctctcctcgacaacttcgagtgg 194
>gb|CA614945.1|CA614945 wr1.pk178.g9 wr1 Triticum aestivum cDNA clone wr1.pk178.g9 5' end,
mRNA sequence
Length = 493
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
|||||||||||||| |||| |||||||||||||||
Sbjct: 343 tacttcgcgtggtctctcctcgacaacttcgagtgg 378
>gb|CA628775.1|CA628775 wle1n.pk0009.c11 wle1n Triticum aestivum cDNA clone
wle1n.pk0009.c11 5' end, mRNA sequence
Length = 238
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
||||| |||||||| ||||||||||||||||||||
Sbjct: 46 tactttgcgtggtccctcctggacaacttcgagtgg 81
>gb|CA632472.1|CA632472 wle1n.pk0059.e1 wle1n Triticum aestivum cDNA clone wle1n.pk0059.e1
5' end, mRNA sequence
Length = 363
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
|||||||||||||| |||| |||||||||||||||
Sbjct: 75 tacttcgcgtggtctctcctcgacaacttcgagtgg 110
>gb|CA638913.1|CA638913 wre1n.pk0018.a10 wre1n Triticum aestivum cDNA clone
wre1n.pk0018.a10 5' end, mRNA sequence
Length = 541
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 535 tacttcgcgtggtcattcctggacaacttcgagtgg 570
|||||||||||||| |||| |||||||||||||||
Sbjct: 263 tacttcgcgtggtctctcctcgacaacttcgagtgg 228
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 131,461
Number of Sequences: 636343
Number of extensions: 131461
Number of successful extensions: 36776
Number of sequences better than 0.5: 99
Number of HSP's better than 0.5 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36616
Number of HSP's gapped (non-prelim): 153
length of query: 857
length of database: 367,240,239
effective HSP length: 19
effective length of query: 838
effective length of database: 355,149,722
effective search space: 297615467036
effective search space used: 297615467036
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)