BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115184.2.3
(1548 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ248931.1|BJ248931 BJ248931 Y. Ogihara unpublished cDNA... 375 e-102
gb|BJ253558.1|BJ253558 BJ253558 Y. Ogihara unpublished cDNA... 345 6e-093
gb|BJ246629.1|BJ246629 BJ246629 Y. Ogihara unpublished cDNA... 323 2e-086
gb|BJ252567.1|BJ252567 BJ252567 Y. Ogihara unpublished cDNA... 297 1e-078
gb|BJ251356.1|BJ251356 BJ251356 Y. Ogihara unpublished cDNA... 291 7e-077
gb|BJ245473.1|BJ245473 BJ245473 Y. Ogihara unpublished cDNA... 281 7e-074
gb|BJ249864.1|BJ249864 BJ249864 Y. Ogihara unpublished cDNA... 224 1e-056
gb|BF482230.1|BF482230 WHE1798_C12_F24ZS Wheat pre-anthesis... 192 5e-047
gb|BE498499.1|BE498499 WHE0967_B03_C05ZS Wheat pre-anthesis... 190 2e-046
gb|BF202533.1|BF202533 WHE1776_G11_M22ZS Wheat pre-anthesis... 190 2e-046
gb|BJ243445.1|BJ243445 BJ243445 Y. Ogihara unpublished cDNA... 190 2e-046
gb|CA596773.1|CA596773 wpa1c.pk014.e16 wpa1c Triticum aesti... 190 2e-046
gb|BF484749.1|BF484749 WHE2319_C03_F05ZS Wheat pre-anthesis... 174 1e-041
gb|BF484866.1|BF484866 WHE2320_E08_J16ZS Wheat pre-anthesis... 157 3e-036
gb|BE637995.1|BE637995 WHE0995-0998_O23_O23ZS Wheat pre-ant... 151 2e-034
gb|CA741798.1|CA741798 wia1c.pk003.h2 wia1c Triticum aestiv... 151 2e-034
gb|CD454470.1|CD454470 WHE2319_C03_F05ZT CS wheat pre-anthe... 151 2e-034
gb|BJ249502.1|BJ249502 BJ249502 Y. Ogihara unpublished cDNA... 149 7e-034
gb|BJ244077.1|BJ244077 BJ244077 Y. Ogihara unpublished cDNA... 147 3e-033
gb|BJ247485.1|BJ247485 BJ247485 Y. Ogihara unpublished cDNA... 131 2e-028
gb|CA594554.1|CA594554 wpa1c.pk008.m5 wpa1c Triticum aestiv... 121 2e-025
gb|BG263187.1|BG263187 WHE2339_A12_B23ZS Wheat pre-anthesis... 107 2e-021
gb|BJ253848.1|BJ253848 BJ253848 Y. Ogihara unpublished cDNA... 70 5e-010
gb|BQ902457.1|BQ902457 Ta02_02g09_R Ta02_AAFC_ECORC_Fusariu... 70 5e-010
gb|CD454818.1|CD454818 WHE3454_A04_B08ZT CS wheat pre-anthe... 70 5e-010
gb|CD454595.1|CD454595 WHE2329_A04_A07ZT CS wheat pre-anthe... 62 1e-007
gb|CZ889985.1|CZ889985 gy41b11.x1.b.screen Bread wheat meth... 60 5e-007
gb|BF483450.1|BF483450 WHE2334_A09_A18ZS Wheat pre-anthesis... 60 5e-007
gb|BJ264150.1|BJ264150 BJ264150 Y. Ogihara unpublished cDNA... 60 5e-007
gb|BJ266186.1|BJ266186 BJ266186 Y. Ogihara unpublished cDNA... 60 5e-007
gb|BJ266660.1|BJ266660 BJ266660 Y. Ogihara unpublished cDNA... 60 5e-007
gb|CD935721.1|CD935721 OV.102E15F010202 OV Triticum aestivu... 60 5e-007
gb|CD935856.1|CD935856 OV.102K13F010202 OV Triticum aestivu... 60 5e-007
gb|CD896286.1|CD896286 G174.102G03F010822 G174 Triticum aes... 54 3e-005
gb|BE404485.1|BE404485 WHE0442_H04_O08ZS Wheat etiolated se... 46 0.007
gb|BF202204.1|BF202204 WHE1778_H03_O05ZS Wheat pre-anthesis... 44 0.029
gb|BG605368.1|BG605368 WHE2329_A04_A07ZS Wheat pre-anthesis... 44 0.029
gb|BJ226169.1|BJ226169 BJ226169 Y. Ogihara unpublished cDNA... 44 0.029
gb|BJ231070.1|BJ231070 BJ231070 Y. Ogihara unpublished cDNA... 44 0.029
gb|BJ236635.1|BJ236635 BJ236635 Y. Ogihara unpublished cDNA... 44 0.029
gb|BQ240401.1|BQ240401 TaE05018A07R TaE05 Triticum aestivum... 44 0.029
gb|CK210095.1|CK210095 FGAS021886 Triticum aestivum FGAS: L... 44 0.029
gb|DR734786.1|DR734786 FGAS080540 Triticum aestivum FGAS: L... 44 0.029
gb|DR740261.1|DR740261 FGAS085189 Triticum aestivum FGAS: L... 44 0.029
gb|BF473363.1|BF473363 WHE0923_F04_L07ZS Wheat 5-15 DAP spi... 42 0.11
gb|BJ259267.1|BJ259267 BJ259267 Y. Ogihara unpublished cDNA... 42 0.11
gb|BJ260488.1|BJ260488 BJ260488 Y. Ogihara unpublished cDNA... 42 0.11
gb|CA622651.1|CA622651 wl1n.pk0098.d7 wl1n Triticum aestivu... 42 0.11
gb|CA622772.1|CA622772 wl1n.pk0099.d2 wl1n Triticum aestivu... 42 0.11
gb|CD868569.1|CD868569 AZO2.109E15F001114 AZO2 Triticum aes... 42 0.11
gb|CD868596.1|CD868596 AZO2.109F15R010517 AZO2 Triticum aes... 42 0.11
gb|CK206912.1|CK206912 FGAS018523 Triticum aestivum FGAS: L... 42 0.11
gb|AL810175.1|AL810175 AL810175 d:15 Triticum aestivum cDNA... 42 0.11
gb|AL811841.1|AL811841 AL811841 d:15 Triticum aestivum cDNA... 42 0.11
gb|CA698803.1|CA698803 wlk8.pk0007.c12 wlk8 Triticum aestiv... 40 0.45
gb|CA728173.1|CA728173 wdi1c.pk002.f1 wdi1c Triticum aestiv... 40 0.45
gb|CD935816.1|CD935816 OV.102I15R010426 OV Triticum aestivu... 40 0.45
gb|CD935820.1|CD935820 OV.102I21R010426 OV Triticum aestivu... 40 0.45
gb|CF134031.1|CF134031 WHE4366_G02_N04ZT Wheat meiotic flor... 40 0.45
gb|CK163230.1|CK163230 FGAS015851 Triticum aestivum FGAS: L... 40 0.45
gb|CV768675.1|CV768675 FGAS063066 Triticum aestivum FGAS: L... 40 0.45
>gb|BJ248931.1|BJ248931 BJ248931 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf8k17 5', mRNA sequence
Length = 556
Score = 375 bits (189), Expect = e-102
Identities = 386/451 (85%), Gaps = 3/451 (0%)
Strand = Plus / Minus
Query: 296 ggacttgccgatggcgttcttgcagacggccatggtcttgttgccggatccattgtactt 355
|||| |||||| ||||||||||||||||||||||||||||||| | || |||||||
Sbjct: 461 ggacgtgccgacggcgttcttgcagacggccatggtcttgttgttcgtgccggtgtactt 402
Query: 356 gatgtcgacgttgacgagctgcacgccctggcatggcaggttgttggcgcagttgagcgt 415
|| || ||||||||||||||||| ||||||||| |||| ||||||| |||||||||||||
Sbjct: 401 gaggttgacgttgacgagctgcaggccctggcagggcacgttgttgacgcagttgagcgt 342
Query: 416 gatggcctccggcgtgttggaggtgccgtggatgttcttgaagacgacgtcgttgacggc 475
|| |||||| |||||| |||||| ||| ||||||||||||||||| |||| |||| |
Sbjct: 341 gacggcctcgggcgtggcggaggtcccgacgatgttcttgaagacgatgtcggcgacgac 282
Query: 476 caccttggaggcgcc---ggacttgacgcagatgttgttggggcagtacttctggtcgat 532
||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||
Sbjct: 281 caccttggaggcgccgggggccttggcgcagatgttgttggggcagtacttctggtcgat 222
Query: 533 gatgatggggtaggagacattgtccatggtgatgccctcgtacaggaacttgctggcctt 592
|| ||||||||||||||| |||||||| | | | | ||||||| ||| | ||||| |
Sbjct: 221 gacgatggggtaggagacgttgtccattttcacgtcgtcgtacacgaagcgggtggccct 162
Query: 593 gagcgacgacttggagtcctcgtacgacttgatgcgcaggccgttcgtggtgccggcgat 652
||||| ||||||||||||||||||||||||||| || || ||||| |||| ||| |||
Sbjct: 161 gagcgccgacttggagtcctcgtacgacttgatccggagcccgttggtggcgcccttgat 102
Query: 653 cgtgcaccccgtcacctgcacgtcttccacgtccttctcgtccttgtagcgccccaggct 712
||||| |||||||| | ||| ||||||||||||||||||||||| |||||||||||
Sbjct: 101 ggtgcagttggtcacctggatgtcctccacgtccttctcgtccttgtaccgccccaggct 42
Query: 713 gccgacgctgatgccgtggcctgggccgcac 743
||| ||||||||||||||||| |||||||||
Sbjct: 41 gcccacgctgatgccgtggccggggccgcac 11
>gb|BJ253558.1|BJ253558 BJ253558 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf2g18 3', mRNA sequence
Length = 634
Score = 345 bits (174), Expect = 6e-093
Identities = 382/451 (84%), Gaps = 3/451 (0%)
Strand = Plus / Plus
Query: 296 ggacttgccgatggcgttcttgcagacggccatggtcttgttgccggatccattgtactt 355
||||||||||| ||||||||||||||||||||||||||||||| || || |||||||
Sbjct: 148 ggacttgccgacggcgttcttgcagacggccatggtcttgttgttggtgccggtgtactt 207
Query: 356 gatgtcgacgttgacgagctgcacgccctggcatggcaggttgttggcgcagttgagcgt 415
|| || ||||||||||||||| | ||||||||| |||| ||||||| |||||||||||||
Sbjct: 208 gaggttgacgttgacgagctggaggccctggcagggcacgttgttgacgcagttgagcgt 267
Query: 416 gatggcctccggcgtgttggaggtgccgtggatgttcttgaagacgacgtcgttgacggc 475
|| |||||||||||| || || ||| ||||||||||||||||| |||| |||| |
Sbjct: 268 gacggcctccggcgtcgccgacgtcccgacgatgttcttgaagacgatgtcggcgacgac 327
Query: 476 caccttggaggcgcc---ggacttgacgcagatgttgttggggcagtacttctggtcgat 532
||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||
Sbjct: 328 caccttggaggcgccgggggccttggcgcagatgttgttggggcagtacttctggtcgat 387
Query: 533 gatgatggggtaggagacattgtccatggtgatgccctcgtacaggaacttgctggcctt 592
|| ||||||||||||||| |||||||| | | | | ||||||| ||| | |||||
Sbjct: 388 gacgatggggtaggagacgttgtccatcctcacgtcgtcgtacacgaagcgggtggcccg 447
Query: 593 gagcgacgacttggagtcctcgtacgacttgatgcgcaggccgttcgtggtgccggcgat 652
||||| ||||||||||||||||||||||||||| || || ||||| |||| ||| |||
Sbjct: 448 gagcgccgacttggagtcctcgtacgacttgatccggagcccgttggtggcgcccttgat 507
Query: 653 cgtgcaccccgtcacctgcacgtcttccacgtccttctcgtccttgtagcgccccaggct 712
||||| |||||||| | ||| ||||||| ||||||||||||||| |||||||||||
Sbjct: 508 ggtgcagttggtcacctggatgtcctccacgtncttctcgtccttgtaccgccccaggct 567
Query: 713 gccgacgctgatgccgtggcctgggccgcac 743
||| |||||||| |||||||| |||||||||
Sbjct: 568 gcccacgctgatcccgtggccggggccgcac 598
>gb|BJ246629.1|BJ246629 BJ246629 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf24o17 5', mRNA sequence
Length = 656
Score = 323 bits (163), Expect = 2e-086
Identities = 363/429 (84%), Gaps = 3/429 (0%)
Strand = Plus / Minus
Query: 296 ggacttgccgatggcgttcttgcagacggccatggtcttgttgccggatccattgtactt 355
||||||||||| ||||||||||||||||||||||||||||||| || || |||||||
Sbjct: 429 ggacttgccgacggcgttcttgcagacggccatggtcttgttgttggtgccggtgtactt 370
Query: 356 gatgtcgacgttgacgagctgcacgccctggcatggcaggttgttggcgcagttgagcgt 415
|| || ||||||||||||||| | ||||||||| |||| ||||||| |||||||||||||
Sbjct: 369 gaggttgacgttgacgagctggaggccctggcagggcacgttgttgacgcagttgagcgt 310
Query: 416 gatggcctccggcgtgttggaggtgccgtggatgttcttgaagacgacgtcgttgacggc 475
|| |||||||||||| || || ||| ||||||||||||||||| |||| |||| |
Sbjct: 309 gacggcctccggcgtcgccgacgtcccgacgatgttcttgaagacgatgtcggcgacgac 250
Query: 476 caccttggaggcgcc---ggacttgacgcagatgttgttggggcagtacttctggtcgat 532
||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||
Sbjct: 249 caccttggaggcgccgggggccttggcgcagatgttgttggggcagtacttctggtcgat 190
Query: 533 gatgatggggtaggagacattgtccatggtgatgccctcgtacaggaacttgctggcctt 592
|| ||||||||||||||| |||||||| | | | | ||||||| ||| | |||||
Sbjct: 189 gacgatggggtaggagacgttgtccatcctcacgtcgtcgtacacgaagcgggtggcccg 130
Query: 593 gagcgacgacttggagtcctcgtacgacttgatgcgcaggccgttcgtggtgccggcgat 652
||||| ||||||||||||||||||||||||||| || || ||||| |||| ||| |||
Sbjct: 129 gagcgccgacttggagtcctcgtacgacttgatccggagcccgttggtggcgcccttgat 70
Query: 653 cgtgcaccccgtcacctgcacgtcttccacgtccttctcgtccttgtagcgccccaggct 712
||||| |||||||| | ||| ||||||||||||||||||||||| |||||||||||
Sbjct: 69 ggtgcagttggtcacctggatgtcctccacgtccttctcgtccttgtaccgccccaggct 10
Query: 713 gccgacgct 721
||| |||||
Sbjct: 9 gcccacgct 1
>gb|BJ252567.1|BJ252567 BJ252567 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf24o17 3', mRNA sequence
Length = 612
Score = 297 bits (150), Expect = 1e-078
Identities = 344/408 (84%), Gaps = 3/408 (0%)
Strand = Plus / Plus
Query: 296 ggacttgccgatggcgttcttgcagacggccatggtcttgttgccggatccattgtactt 355
||||||||||| ||||||||||||||||||||||||||||||| || || |||||||
Sbjct: 201 ggacttgccgacggcgttcttgcagacggccatggtcttgttgttggtgccggtgtactt 260
Query: 356 gatgtcgacgttgacgagctgcacgccctggcatggcaggttgttggcgcagttgagcgt 415
|| || ||||||||||||||| | ||||||||| |||| ||||||| |||||||||||||
Sbjct: 261 gaggttgacgttgacgagctggaggccctggcagggcacgttgttgacgcagttgagcgt 320
Query: 416 gatggcctccggcgtgttggaggtgccgtggatgttcttgaagacgacgtcgttgacggc 475
|| |||||||||||| || || ||| ||||||||||||||||| |||| |||| |
Sbjct: 321 gacggcctccggcgtcgccgacgtcccgacgatgttcttgaagacgatgtcggcgacgac 380
Query: 476 caccttggaggcgcc---ggacttgacgcagatgttgttggggcagtacttctggtcgat 532
||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 caccttggaggcgccgggggccttggcgcagatgttgttggggcagtacttctggtcgat 440
Query: 533 gatgatggggtaggagacattgtccatggtgatgccctcgtacaggaacttgctggcctt 592
|| ||||||||||||||| |||||||| | | | | ||||||| ||| | |||||
Sbjct: 441 gacgatggggtaggagacgttgtccatcctcacgtcgtcgtacacgaagcgggtggcccg 500
Query: 593 gagcgacgacttggagtcctcgtacgacttgatgcgcaggccgttcgtggtgccggcgat 652
||||| ||||||||||||||||||||||||||| || || ||||| |||| ||| |||
Sbjct: 501 gagcgccgacttggagtcctcgtacgacttgatccggagcccgttggtggcgcccttgat 560
Query: 653 cgtgcaccccgtcacctgcacgtcttccacgtccttctcgtccttgta 700
||||| |||||||| | ||| |||||||||||||||||||||||
Sbjct: 561 ggtgcagttggtcacctggatgtcctccacgtccttctcgtccttgta 608
>gb|BJ251356.1|BJ251356 BJ251356 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19m10 3', mRNA sequence
Length = 531
Score = 291 bits (147), Expect = 7e-077
Identities = 287/333 (86%), Gaps = 3/333 (0%)
Strand = Plus / Plus
Query: 296 ggacttgccgatggcgttcttgcagacggccatggtcttgttgccggatccattgtactt 355
|||| |||||| ||||||||||||||||||||||||||||||| | || |||||||
Sbjct: 198 ggacgtgccgacggcgttcttgcagacggccatggtcttgttgttcgtgccggtgtactt 257
Query: 356 gatgtcgacgttgacgagctgcacgccctggcatggcaggttgttggcgcagttgagcgt 415
|| || ||||||||||||||||| ||||||||| |||| ||||||| |||||||||||||
Sbjct: 258 gaggttgacgttgacgagctgcaggccctggcagggcacgttgttgacgcagttgagcgt 317
Query: 416 gatggcctccggcgtgttggaggtgccgtggatgttcttgaagacgacgtcgttgacggc 475
|| |||||| |||||| |||||| ||| ||||||||||||||||| |||| |||| |
Sbjct: 318 gacggcctcgggcgtggcggaggtcccgacgatgttcttgaagacgatgtcggcgacgac 377
Query: 476 caccttggaggcgcc---ggacttgacgcagatgttgttggggcagtacttctggtcgat 532
||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||
Sbjct: 378 caccttggaggcgccgggggccttggcgcagatgttgttggggcagtacttctggtcgat 437
Query: 533 gatgatggggtaggagacattgtccatggtgatgccctcgtacaggaacttgctggcctt 592
|| ||||||||||||||| |||||||| | | | | ||||||| ||| | ||||| |
Sbjct: 438 gacgatggggtaggagacgttgtccattttcacgtcgtcgtacacgaagcgggtggccct 497
Query: 593 gagcgacgacttggagtcctcgtacgacttgat 625
||||| |||||||||||||||||||||||||||
Sbjct: 498 gagcgccgacttggagtcctcgtacgacttgat 530
>gb|BJ245473.1|BJ245473 BJ245473 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19m10 5', mRNA sequence
Length = 553
Score = 281 bits (142), Expect = 7e-074
Identities = 282/328 (85%), Gaps = 3/328 (0%)
Strand = Plus / Minus
Query: 296 ggacttgccgatggcgttcttgcagacggccatggtcttgttgccggatccattgtactt 355
|||| |||||| ||||||||||||||||||||||||||||||| | || |||||||
Sbjct: 328 ggacgtgccgacggcgttcttgcagacggccatggtcttgttgttcgtgccggtgtactt 269
Query: 356 gatgtcgacgttgacgagctgcacgccctggcatggcaggttgttggcgcagttgagcgt 415
|| || ||||||||||||||||| ||||||||| |||| ||||||| |||||||||||||
Sbjct: 268 gaggttgacgttgacgagctgcaggccctggcagggcacgttgttgacgcagttgagcgt 209
Query: 416 gatggcctccggcgtgttggaggtgccgtggatgttcttgaagacgacgtcgttgacggc 475
|| |||||| |||||| |||||| ||| ||||||||||||||||| |||| |||| |
Sbjct: 208 gacggcctcgggcgtggcggaggtcccgacgatgttcttgaagacgatgtcggcgacgac 149
Query: 476 caccttggaggcgcc---ggacttgacgcagatgttgttggggcagtacttctggtcgat 532
||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||
Sbjct: 148 caccttggaggcgccgggggccttggcgcagatgttgttggggcagtacttctggtcgat 89
Query: 533 gatgatggggtaggagacattgtccatggtgatgccctcgtacaggaacttgctggcctt 592
|| ||||||||||||||| |||||||| | | | | ||||||| ||| | ||||| |
Sbjct: 88 gacgatggggtaggagacgttgtccattttcacgtcgtcgtacacgaagcgggtggccct 29
Query: 593 gagcgacgacttggagtcctcgtacgac 620
||||| ||||||||||||||||||||||
Sbjct: 28 gagcgccgacttggagtcctcgtacgac 1
>gb|BJ249864.1|BJ249864 BJ249864 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14b21 3', mRNA sequence
Length = 619
Score = 224 bits (113), Expect = 1e-056
Identities = 283/339 (83%), Gaps = 3/339 (0%)
Strand = Plus / Plus
Query: 365 gttgacgagctgcacgccctggcatggcaggttgttggcgcagttgagcgtgatggcctc 424
|||| ||||||| | ||||||||| |||| ||||||| ||||||||||||||| ||||||
Sbjct: 277 gttgccgagctggaggccctggcagggcacgttgttgacgcagttgagcgtgacggcctc 336
Query: 425 cggcgtgttggaggtgccgtggatgttcttgaagacgacgtcgttgacggccaccttgga 484
|||||| || || ||| ||||||||||||||||| |||| |||| ||||||||||
Sbjct: 337 cggcgtcgccgacgtcccgacgatgttcttgaagacgatgtcggcgacgaccaccttgga 396
Query: 485 ggcgccgga---cttgacgcagatgttgttggggcagtacttctggtcgatgatgatggg 541
|||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 397 ggcgccgggggccttggcgcagatgttgttggggcagtacttctggtcgatgacgatggg 456
Query: 542 gtaggagacattgtccatggtgatgccctcgtacaggaacttgctggccttgagcgacga 601
||||||||| |||||||| | | | | ||||||| ||| | ||||| ||||| |||
Sbjct: 457 gtaggagacgttgtccatcctcacgtcgtcgtacacgaagcgggtggcccggagcgccga 516
Query: 602 cttggagtcctcgtacgacttgatgcgcaggccgttcgtggtgccggcgatcgtgcaccc 661
|||||||||||||||||||||||| || || ||||| |||| ||| ||| |||||
Sbjct: 517 cttggagtcctcgtacgacttgatccggagcccgttggtggcgcccttgatggtgcagtt 576
Query: 662 cgtcacctgcacgtcttccacgtccttctcgtccttgta 700
|||||||| | ||| |||||||||||||||||||||||
Sbjct: 577 ggtcacctggatgtcctccacgtccttctcgtccttgta 615
>gb|BF482230.1|BF482230 WHE1798_C12_F24ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1798_C12_F24, mRNA sequence
Length = 590
Score = 192 bits (97), Expect = 5e-047
Identities = 211/249 (84%)
Strand = Plus / Minus
Query: 1058 ccacaccagggctccctgcccgtcgatggtgccgtggccgttgatggacaggttctcgac 1117
|||||| |||| ||||| ||||||||| ||||||||||||||||| | ||| || ||
Sbjct: 491 ccacacgagggggccctggccgtcgatgacgccgtggccgttgatggcgaagttgtccac 432
Query: 1118 gttctcgatctcgatccagttcctttggtacgcgctgaggtcgccggtgccgagcaggtt 1177
| | | ||||||||||||| | | ||| ||| ||||||||||||||||||| |||||
Sbjct: 431 gcgcatcacctcgatccagttcttcttgtaggcggtgaggtcgccggtgccgaggaggtt 372
Query: 1178 gccgtcgagacggatgatgatggaggacttgcaggggcccttcagctccagcccgcccgt 1237
|||||| || ||||||||||||||||| ||||||||||| |||||||||| |||||
Sbjct: 371 gccgtccagccggatgatgatggaggaggtgcaggggcccgacagctccagcgcgcccac 312
Query: 1238 caggtagttgcccggcgggatgacgatcttctgtacccccgtcgcctcgcacgcgttctt 1297
|||| |||||||||||||||| ||||||||||| |||||||||| |||||||||||||
Sbjct: 311 caggaagttgcccggcgggatcacgatcttctgcgtccccgtcgccccgcacgcgttctt 252
Query: 1298 ccacgcctt 1306
|||||||||
Sbjct: 251 ccacgcctt 243
Score = 40.1 bits (20), Expect = 0.45
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1325 gtccgacttgccgtcgcccttggc 1348
||||| ||||||||||||||||||
Sbjct: 224 gtccgtcttgccgtcgcccttggc 201
>gb|BE498499.1|BE498499 WHE0967_B03_C05ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0967_B03_C05, mRNA sequence
Length = 473
Score = 190 bits (96), Expect = 2e-046
Identities = 159/180 (88%)
Strand = Plus / Minus
Query: 1127 ctcgatccagttcctttggtacgcgctgaggtcgccggtgccgagcaggttgccgtcgag 1186
||||||||||||| | | ||| ||| ||||||||||||||||||| ||||||||||| ||
Sbjct: 426 ctcgatccagttcttcttgtaggcggtgaggtcgccggtgccgaggaggttgccgtccag 367
Query: 1187 acggatgatgatggaggacttgcaggggcccttcagctccagcccgcccgtcaggtagtt 1246
||||||||||||||||| ||||||||||| |||||||||| ||||| |||| ||||
Sbjct: 366 ccggatgatgatggaggaggtgcaggggcccgacagctccagcgcgcccaccaggaagtt 307
Query: 1247 gcccggcgggatgacgatcttctgtacccccgtcgcctcgcacgcgttcttccacgcctt 1306
|||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 306 gcccggcgggatcacgatcttctgcgtccccgtcgccccgcacgcgttcttccacgcctt 247
Score = 40.1 bits (20), Expect = 0.45
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1325 gtccgacttgccgtcgcccttggc 1348
||||| ||||||||||||||||||
Sbjct: 228 gtccgtcttgccgtcgcccttggc 205
>gb|BF202533.1|BF202533 WHE1776_G11_M22ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1776_G11_M22, mRNA sequence
Length = 387
Score = 190 bits (96), Expect = 2e-046
Identities = 260/312 (83%), Gaps = 2/312 (0%)
Strand = Plus / Minus
Query: 996 tccagcaccaagctattcgggaggatcttgcaattgta-agaatgctggcactggttctt 1054
|||||||||| ||| || |||||||||||||| | ||| | |||| ||||||||||||
Sbjct: 367 tccagcaccaggctgttggggaggatcttgcagtcgtagtgcttgct-gcactggttctt 309
Query: 1055 gctccacaccagggctccctgcccgtcgatggtgccgtggccgttgatggacaggttctc 1114
|||||| |||| ||||| |||||||||||||||||||||||||||| | ||| ||
Sbjct: 308 ctcccacacgagggggccctggccgtcgatggtgccgtggccgttgatggtgaagttgtc 249
Query: 1115 gacgttctcgatctcgatccagttcctttggtacgcgctgaggtcgccggtgccgagcag 1174
||| | | ||||||||||||| | | ||| ||| ||||||||||||||||||| ||
Sbjct: 248 cacgcgcatcacctcgatccagttcttcttgtaggcggtgaggtcgccggtgccgaggag 189
Query: 1175 gttgccgtcgagacggatgatgatggaggacttgcaggggcccttcagctccagcccgcc 1234
||||||||| || ||||||||||||||||| |||||||||| |||||||||| ||||
Sbjct: 188 gttgccgtccagccggatgatgatggaggaggtgcaggggcctgacagctccagcgcgcc 129
Query: 1235 cgtcaggtagttgcccggcgggatgacgatcttctgtacccccgtcgcctcgcacgcgtt 1294
| || | |||||||||||||||| |||||||| || |||||||||| ||||||||||
Sbjct: 128 caccaagaagttgcccggcgggatcacgatcttatgcgtccccgtcgccccgcacgcgtt 69
Query: 1295 cttccacgcctt 1306
||||||||||||
Sbjct: 68 cttccacgcctt 57
Score = 42.1 bits (21), Expect = 0.11
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1331 cttgccgtcgcccttggcgcccagc 1355
|||||||||||||||||| ||||||
Sbjct: 32 cttgccgtcgcccttggcccccagc 8
>gb|BJ243445.1|BJ243445 BJ243445 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf11d16 5', mRNA sequence
Length = 309
Score = 190 bits (96), Expect = 2e-046
Identities = 222/264 (84%)
Strand = Plus / Minus
Query: 1043 gcactggttcttgctccacaccagggctccctgcccgtcgatggtgccgtggccgttgat 1102
|||||||||||| |||||| |||| ||||| ||||||||| ||||||||||||||||
Sbjct: 289 gcactggttcttctcccacacgagggggccctggccgtcgatgatgccgtggccgttgat 230
Query: 1103 ggacaggttctcgacgttctcgatctcgatccagttcctttggtacgcgctgaggtcgcc 1162
|| | ||| || ||| | | ||||||||||||| | | ||| ||| ||||||||||
Sbjct: 229 ggcgaagttgtccacgcgcatcacctcgatccagttcttcttgtaggcggtgaggtcgcc 170
Query: 1163 ggtgccgagcaggttgccgtcgagacggatgatgatggaggacttgcaggggcccttcag 1222
|||||| || ||||||||||| || ||||||||||||||||| ||||||||||| |||
Sbjct: 169 ggtgcccaggaggttgccgtccagccggatgatgatggaggaggtgcaggggcccgacag 110
Query: 1223 ctccagcccgcccgtcaggtagttgcccggcgggatgacgatcttctgtacccccgtcgc 1282
|||||| ||||| |||| |||||||||||||||| ||||||||||| |||||||||
Sbjct: 109 ctccagtgcgcccaccaggaagttgcccggcgggatcacgatcttctgcgtccccgtcgc 50
Query: 1283 ctcgcacgcgttcttccacgcctt 1306
| ||||||||||||||||||||||
Sbjct: 49 cccgcacgcgttcttccacgcctt 26
>gb|CA596773.1|CA596773 wpa1c.pk014.e16 wpa1c Triticum aestivum cDNA clone wpa1c.pk014.e16 5'
end, mRNA sequence
Length = 614
Score = 190 bits (96), Expect = 2e-046
Identities = 260/312 (83%), Gaps = 2/312 (0%)
Strand = Plus / Minus
Query: 996 tccagcaccaagctattcgggaggatcttgcaattgta-agaatgctggcactggttctt 1054
|||||||||| ||| || |||||||||||||| | ||| | |||| ||||||||||||
Sbjct: 553 tccagcaccaggctgttggggaggatcttgcagtcgtagtgcttgct-gcactggttctt 495
Query: 1055 gctccacaccagggctccctgcccgtcgatggtgccgtggccgttgatggacaggttctc 1114
|||||| |||| ||||| ||||||||| |||||||||||||||||| | ||| ||
Sbjct: 494 ctcccacacgagggggccctggccgtcgatgatgccgtggccgttgatggcgaagttgtc 435
Query: 1115 gacgttctcgatctcgatccagttcctttggtacgcgctgaggtcgccggtgccgagcag 1174
||| | | ||||||||||||| | | ||| ||| |||||||||||||||| || ||
Sbjct: 434 cacgcgcatcacctcgatccagttcttcttgtaggcggtgaggtcgccggtgcccaggag 375
Query: 1175 gttgccgtcgagacggatgatgatggaggacttgcaggggcccttcagctccagcccgcc 1234
||||||||| || ||||||||||||||||| ||||||||||| ||||||||| ||||
Sbjct: 374 gttgccgtccagccggatgatgatggaggaggtgcaggggcccgacagctccagtgcgcc 315
Query: 1235 cgtcaggtagttgcccggcgggatgacgatcttctgtacccccgtcgcctcgcacgcgtt 1294
| |||| |||||||||||||||| ||||||||||| |||||||||| ||||||||||
Sbjct: 314 caccaggaagttgcccggcgggatcacgatcttctgcgtccccgtcgccccgcacgcgtt 255
Query: 1295 cttccacgcctt 1306
||||||||||||
Sbjct: 254 cttccacgcctt 243
>gb|BF484749.1|BF484749 WHE2319_C03_F05ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2319_C03_F05, mRNA sequence
Length = 401
Score = 174 bits (88), Expect = 1e-041
Identities = 157/180 (87%)
Strand = Plus / Minus
Query: 1127 ctcgatccagttcctttggtacgcgctgaggtcgccggtgccgagcaggttgccgtcgag 1186
||||||||||||| | | ||| ||| |||||||||||||||| || ||||||||||| ||
Sbjct: 381 ctcgatccagttcttcttgtaggcggtgaggtcgccggtgcccaggaggttgccgtccag 322
Query: 1187 acggatgatgatggaggacttgcaggggcccttcagctccagcccgcccgtcaggtagtt 1246
||||||||||||||||| ||||||||||| ||||||||| ||||| |||| ||||
Sbjct: 321 ccggatgatgatggaggaggtgcaggggcccgacagctccagtgcgcccaccaggaagtt 262
Query: 1247 gcccggcgggatgacgatcttctgtacccccgtcgcctcgcacgcgttcttccacgcctt 1306
|||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 261 gcccggcgggatcacgatcttctgcgtccccgtcgccccgcacgcgttcttccacgcctt 202
>gb|BF484866.1|BF484866 WHE2320_E08_J16ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2320_E08_J16, mRNA sequence
Length = 472
Score = 157 bits (79), Expect = 3e-036
Identities = 327/407 (80%), Gaps = 2/407 (0%)
Strand = Plus / Minus
Query: 774 ccggggccgatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatggtcacg 833
||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 406 ccgggcccgatggagatgcagtcgtcgccgacgccgatgttggtcgccttgatggtcacg 347
Query: 834 ttgctggagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttgacc 893
| |||||||| |||||||||||||||||||||||||||| ||||| ||| ||| |
Sbjct: 346 tcctccgagtcgcccatgtggatgccgtccgtgttggggctgttcccgggcgccgtgatc 287
Query: 894 gtcactttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgctg 953
||| || || | ||||||||||||||| | ||||| |||||||||||||||||| |
Sbjct: 286 tccacgttctccaccagcacgttcttgcagttgaagaggttgaggtggaagaactttgcg 227
Query: 954 ttgagcagcgtgatgccgcggatctggacgttcgtcacaaaatccagcaccaagctattc 1013
|| |||||||||||||||||| |||| |||| | |||||||||| ||| ||
Sbjct: 226 ttcttgagcgtgatgccgcggatcgtcgcgttgttcacgtagtccagcaccaggctgttg 167
Query: 1014 gggaggatcttgcaattgta-agaatgctggcactggttcttgctccacaccagggctcc 1072
|||||||||||||| | ||| | |||| |||| |||||| |||||| |||| ||
Sbjct: 166 gggaggatcttgcagtcgtagtgcttgct-gcacatgttcttctcccacacgagggggcc 108
Query: 1073 ctgcccgtcgatggtgccgtggccgttgatggacaggttctcgacgttctcgatctcgat 1132
||| ||||||||| ||||||||||||||||| | ||| || ||| | | ||||||
Sbjct: 107 ctggccgtcgatgacgccgtggccgttgatggcgaagttgtccacgcgcatcacctcgat 48
Query: 1133 ccagttcctttggtacgcgctgaggtcgccggtgccgagcaggttgc 1179
||||||| ||| ||| ||| ||||||||||||||||||| |||||||
Sbjct: 47 ccagttctttttgtaggcggtgaggtcgccggtgccgaggaggttgc 1
>gb|BE637995.1|BE637995 WHE0995-0998_O23_O23ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0995-0998_O23_O23, mRNA sequence
Length = 335
Score = 151 bits (76), Expect = 2e-034
Identities = 132/151 (87%)
Strand = Plus / Minus
Query: 1156 ggtcgccggtgccgagcaggttgccgtcgagacggatgatgatggaggacttgcaggggc 1215
||||||||||||| || ||||||||||| || ||||||||||||||||| |||||||||
Sbjct: 335 ggtcgccggtgcccaggaggttgccgtccagccggatgatgatggaggaggtgcaggggc 276
Query: 1216 ccttcagctccagcccgcccgtcaggtagttgcccggcgggatgacgatcttctgtaccc 1275
|| ||||||||| ||||| |||| |||||||||||||||| |||||||| || ||
Sbjct: 275 ccgacagctccagtgcgcccaccaggaagttgcccggcgggatcacgatcttntgcgtcc 216
Query: 1276 ccgtcgcctcgcacgcgttcttccacgcctt 1306
|||||||| ||||||||||||||||||||||
Sbjct: 215 ccgtcgccccgcacgcgttcttccacgcctt 185
>gb|CA741798.1|CA741798 wia1c.pk003.h2 wia1c Triticum aestivum cDNA clone wia1c.pk003.h2 5'
end, mRNA sequence
Length = 572
Score = 151 bits (76), Expect = 2e-034
Identities = 148/172 (86%)
Strand = Plus / Minus
Query: 296 ggacttgccgatggcgttcttgcagacggccatggtcttgttgccggatccattgtactt 355
||||||||||| ||||||||||||||||||||||||||||||| || || |||||||
Sbjct: 344 ggacttgccgacggcgttcttgcagacggccatggtcttgttgttggtgccggtgtactt 285
Query: 356 gatgtcgacgttgacgagctgcacgccctggcatggcaggttgttggcgcagttgagcgt 415
|| || ||||||||||||||| | ||||||||| |||| ||||||| |||||||||||||
Sbjct: 284 gaggttgacgttgacgagctggaggccctggcagggcacgttgttgacgcagttgagcgt 225
Query: 416 gatggcctccggcgtgttggaggtgccgtggatgttcttgaagacgacgtcg 467
|| |||||||||||| || || ||| ||||||||||||||||| ||||
Sbjct: 224 gacggcctccggcgtcgccgacgtcccgacgatgttcttgaagacgatgtcg 173
Score = 79.8 bits (40), Expect = 5e-013
Identities = 100/120 (83%)
Strand = Plus / Plus
Query: 523 tctggtcgatgatgatggggtaggagacattgtccatggtgatgccctcgtacaggaact 582
|||||||||||| ||||||||||||||| |||||||| | | | | ||||||| |||
Sbjct: 31 tctggtcgatgacgatggggtaggagacgttgtccatcctcacgtcgtcgtacacgaagc 90
Query: 583 tgctggccttgagcgacgacttggagtcctcgtacgacttgatgcgcaggccgttcgtgg 642
| ||||| ||||| ||||||||||||||||||||||||||| || || ||||| ||||
Sbjct: 91 gggtggcccggagcgccgacttggagtcctcgtacgacttgatccggagcccgttggtgg 150
Score = 52.0 bits (26), Expect = 1e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 501 cagatgttgttggggcagtacttctg 526
||||||||||||||||||||||||||
Sbjct: 34 cagatgttgttggggcagtacttctg 9
>gb|CD454470.1|CD454470 WHE2319_C03_F05ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2319_C03_F05, mRNA sequence
Length = 649
Score = 151 bits (76), Expect = 2e-034
Identities = 148/172 (86%)
Strand = Plus / Plus
Query: 296 ggacttgccgatggcgttcttgcagacggccatggtcttgttgccggatccattgtactt 355
||||||||||| ||||||||||||||||||||||||||||||| || || |||||||
Sbjct: 235 ggacttgccgacggcgttcttgcagacggccatggtcttgttgttggtgccggtgtactt 294
Query: 356 gatgtcgacgttgacgagctgcacgccctggcatggcaggttgttggcgcagttgagcgt 415
|| || ||||||||||||||| | ||||||||| |||| ||||||| |||||||||||||
Sbjct: 295 gaggttgacgttgacgagctggaggccctggcagggcacgttgttgacgcagttgagcgt 354
Query: 416 gatggcctccggcgtgttggaggtgccgtggatgttcttgaagacgacgtcg 467
|| |||||||||||| || || ||| ||||||||||||||||| ||||
Sbjct: 355 gacggcctccggcgtcgccgacgtcccgacgatgttcttgaagacgatgtcg 406
Score = 67.9 bits (34), Expect = 2e-009
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 840 gagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttgaccgtcact 899
|||||||| |||||||||||||||||||||||||||| || || ||| ||| | |||
Sbjct: 430 gagtcgcccatgtggatgccgtccgtgttggggctgttccccggcgccgtgatctccacg 489
Query: 900 ttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaactt 949
|| || | |||||| |||||| | ||||| ||||||||||||||||||
Sbjct: 490 ttctccaccagcaccgacttgcagttgaagaggttgaggtggaagaactt 539
>gb|BJ249502.1|BJ249502 BJ249502 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf11d16 3', mRNA sequence
Length = 337
Score = 149 bits (75), Expect = 7e-034
Identities = 120/135 (88%)
Strand = Plus / Plus
Query: 296 ggacttgccgatggcgttcttgcagacggccatggtcttgttgccggatccattgtactt 355
||||||||||| ||||||||||||||||||||||||||||||| || || |||||||
Sbjct: 202 ggacttgccgacggcgttcttgcagacggccatggtcttgttgttggtgccggtgtactt 261
Query: 356 gatgtcgacgttgacgagctgcacgccctggcatggcaggttgttggcgcagttgagcgt 415
|| || ||||||||||||||| | ||||||||| |||| ||||||| |||||||||||||
Sbjct: 262 gaggttgacgttgacgagctggaggccctggcagggcacgttgttgacgcagttgagcgt 321
Query: 416 gatggcctccggcgt 430
|| ||||||||||||
Sbjct: 322 gacggcctccggcgt 336
>gb|BJ244077.1|BJ244077 BJ244077 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf14b21 5', mRNA sequence
Length = 642
Score = 147 bits (74), Expect = 3e-033
Identities = 182/218 (83%)
Strand = Plus / Minus
Query: 526 ggtcgatgatgatggggtaggagacattgtccatggtgatgccctcgtacaggaacttgc 585
||||||||| ||||||||||||||| |||||||| | | | | ||||||| ||| |
Sbjct: 642 ggtcgatgacgatggggtaggagacgttgtccatcctcacgtcgtcgtacacgaagcggg 583
Query: 586 tggccttgagcgacgacttggagtcctcgtacgacttgatgcgcaggccgttcgtggtgc 645
||||| ||||| ||||||||||||||||||||||||||| || || ||||| |||| ||
Sbjct: 582 tggcccggagcgccgacttggagtcctcgtacgacttgatccggagcccgttggtggcgc 523
Query: 646 cggcgatcgtgcaccccgtcacctgcacgtcttccacgtccttctcgtccttgtagcgcc 705
| ||| ||||| |||||||| | ||| ||||||||||||||||||||||| ||||
Sbjct: 522 ccttgatggtgcagttggtcacctggatgtcctccacgtccttctcgtccttgtaccgcc 463
Query: 706 ccaggctgccgacgctgatgccgtggcctgggccgcac 743
|||||||||| |||||||| |||||||| |||||||||
Sbjct: 462 ccaggctgcccacgctgatcccgtggccggggccgcac 425
Score = 119 bits (60), Expect = 6e-025
Identities = 266/332 (80%), Gaps = 2/332 (0%)
Strand = Plus / Minus
Query: 774 ccggggccgatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatggtcacg 833
||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 394 ccgggcccgatggagatgcagtcgtcgccgacgccgatgttggtcgccttgatggtcacg 335
Query: 834 ttgctggagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttgacc 893
| |||||||| |||||||||||||||||||||||||||| || || ||| ||| |
Sbjct: 334 tcctccgagtcgcccatgtggatgccgtccgtgttggggctgttccccggcgccgtgatc 275
Query: 894 gtcactttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgctg 953
||| || || | |||||| |||||| | ||||| |||||||||||||||||| |
Sbjct: 274 tccacgttctccaccagcaccgacttgcagttgaagaggttgaggtggaagaactttgcg 215
Query: 954 ttgagcagcgtgatgccgcggatctggacgttcgtcacaaaatccagcaccaagctattc 1013
|| ||||||||||| |||||| |||| |||| | |||||||||| ||| ||
Sbjct: 214 ttcttgagcgtgatgccacggatcgtcgcgttgttcacgtagtccagcaccaggctgttg 155
Query: 1014 gggaggatcttgcaattgta-agaatgctggcactggttcttgctccacaccagggctcc 1072
|||||||||||||| | ||| | |||| |||||||||||| |||||| |||| ||
Sbjct: 154 gggaggatcttgcagtcgtagtgcttgct-gcactggttcttctcccacacgagggggcc 96
Query: 1073 ctgcccgtcgatggtgccgtggccgttgatgg 1104
||| ||||||||| ||||||||||||||||||
Sbjct: 95 ctggccgtcgatgatgccgtggccgttgatgg 64
>gb|BJ247485.1|BJ247485 BJ247485 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf2g18 5', mRNA sequence
Length = 600
Score = 131 bits (66), Expect = 2e-028
Identities = 326/410 (79%), Gaps = 2/410 (0%)
Strand = Plus / Minus
Query: 774 ccggggccgatggagatgcagtcgtcgccgacgccgatggtggtgctgctgatggtcacg 833
||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 421 ccgggcccgatggagatgcagtcgtcgccgacgccgatgttggtcgccttgatggtcacg 362
Query: 834 ttgctggagtcgccgatgtggatgccgtccgtgttggggctgtcgccgggggccttgacc 893
| |||||||| |||||||||||||||||||||||||||| || || ||| ||| |
Sbjct: 361 tcctccgagtcgcccatgtggatgccgtccgtgttggggctgttccccggcgccgtgatc 302
Query: 894 gtcactttgtcgatcagcacgttcttgcactcgaagatgttgaggtggaagaacttgctg 953
||| || || | |||||| |||||| | ||||| |||||||||||||||||| |
Sbjct: 301 tccacgttctccaccagcaccgacttgcagttgaagaggttgaggtggaagaactttgcg 242
Query: 954 ttgagcagcgtgatgccgcggatctggacgttcgtcacaaaatccagcaccaagctattc 1013
|| ||||||||||| |||||| |||| |||| | |||||||||| ||| ||
Sbjct: 241 ttcttgagcgtgatgccacggatcgtcgcgttgttcacgtagtccagcaccaggctgttg 182
Query: 1014 gggaggatcttgcaattgta-agaatgctggcactggttcttgctccacaccagggctcc 1072
|||||||||||||| | ||| | |||| |||||||||||| |||||| |||| ||
Sbjct: 181 gggaggatcttgcagtcgtagtgcttgct-gcactggttcttctcccacacgagggggcc 123
Query: 1073 ctgcccgtcgatggtgccgtggccgttgatggacaggttctcgacgttctcgatctcgat 1132
||| ||||||||| |||||||||||||||||| | ||| || ||| | | ||||||
Sbjct: 122 ctggccgtcgatgatgccgtggccgttgatggcgaagttgtccacgcgcatcacctcgat 63
Query: 1133 ccagttcctttggtacgcgctgaggtcgccggtgccgagcaggttgccgt 1182
||||||| | | ||| ||| |||||||||||||||| || ||||||||||
Sbjct: 62 ccagttcttcttgtaggcggtgaggtcgccggtgcccaggaggttgccgt 13
Score = 129 bits (65), Expect = 6e-028
Identities = 125/145 (86%)
Strand = Plus / Minus
Query: 599 cgacttggagtcctcgtacgacttgatgcgcaggccgttcgtggtgccggcgatcgtgca 658
||||||||||||||||||||||||||| || || ||||| |||| ||| ||| |||||
Sbjct: 596 cgacttggagtcctcgtacgacttgatccggagcccgttggtggcgcccttgatggtgca 537
Query: 659 ccccgtcacctgcacgtcttccacgtccttctcgtccttgtagcgccccaggctgccgac 718
|||||||| | ||| ||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 536 gttggtcacctggatgtcctccacgtccttctcgtccttgtaccgccccaggctgcccac 477
Query: 719 gctgatgccgtggcctgggccgcac 743
|||||| |||||||| |||||||||
Sbjct: 476 gctgatcccgtggccggggccgcac 452
>gb|CA594554.1|CA594554 wpa1c.pk008.m5 wpa1c Triticum aestivum cDNA clone wpa1c.pk008.m5 5'
end, mRNA sequence
Length = 491
Score = 121 bits (61), Expect = 2e-025
Identities = 128/151 (84%)
Strand = Plus / Minus
Query: 1153 tgaggtcgccggtgccgagcaggttgccgtcgagacggatgatgatggaggacttgcagg 1212
||||||||||||| ||||| ||||||||||| | ||||||||||||||||| ||||||
Sbjct: 377 tgaggtcgccggtcccgaggaggttgccgtccacccggatgatgatggaggaggtgcagg 318
Query: 1213 ggcccttcagctccagcccgcccgtcaggtagttgcccggcgggatgacgatcttctgta 1272
||| |||||||||| ||||| || | |||||||||||||||| |||||||| |||
Sbjct: 317 ggcnngacagctccagcgcgcccaccaagaagttgcccggcgggatcacgatcttttgtg 258
Query: 1273 cccccgtcgcctcgcacgcgttcttccacgc 1303
||| |||||| |||||||||||| ||||||
Sbjct: 257 tcccagtcgccccgcacgcgttctgccacgc 227
>gb|BG263187.1|BG263187 WHE2339_A12_B23ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2339_A12_B23, mRNA sequence
Length = 167
Score = 107 bits (54), Expect = 2e-021
Identities = 129/154 (83%)
Strand = Plus / Minus
Query: 1082 gatggtgccgtggccgttgatggacaggttctcgacgttctcgatctcgatccagttcct 1141
||||||||||||||||||||||| | ||| || ||| | | ||||||||||||| |
Sbjct: 167 gatggtgccgtggccgttgatggtgaagttgtccacgcgcatcacctcgatccagttctt 108
Query: 1142 ttggtacgcgctgaggtcgccggtgccgagcaggttgccgtcgagacggatgatgatgga 1201
| ||| ||| ||||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct: 107 cttgtaggcggtgaggtcgccggtgccgaggaggttgccgtccagccggatgatgatgga 48
Query: 1202 ggacttgcaggggcccttcagctccagcccgccc 1235
||| |||||||||| |||||||||| |||||
Sbjct: 47 ggaggtgcaggggcctgacagctccagcgcgccc 14
>gb|BJ253848.1|BJ253848 BJ253848 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf3i08 3', mRNA sequence
Length = 583
Score = 69.9 bits (35), Expect = 5e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 507 ttgttggggcagtacttctggtcgatgatgatggggtag 545
||||||||||||||||||||||||||||| |||||||||
Sbjct: 497 ttgttggggcagtacttctggtcgatgataatggggtag 535
>gb|BQ902457.1|BQ902457 Ta02_02g09_R
Ta02_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta02_02g09, mRNA
sequence
Length = 276
Score = 69.9 bits (35), Expect = 5e-010
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 296 ggacttgccgatggcgttcttgcagacggccatggtcttgttg 338
|||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 221 ggacgtgccgacggcgttcttgcagacggccatggtcttgttg 263
>gb|CD454818.1|CD454818 WHE3454_A04_B08ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE3454_A04_B08, mRNA sequence
Length = 710
Score = 69.9 bits (35), Expect = 5e-010
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 507 ttgttggggcagtacttctggtcgatgatgatggggtag 545
|||||||||||||||||||||||||||||||| ||||||
Sbjct: 617 ttgttggggcagtacttctggtcgatgatgatcgggtag 655
>gb|CD454595.1|CD454595 WHE2329_A04_A07ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2329_A04_A07, mRNA sequence
Length = 619
Score = 61.9 bits (31), Expect = 1e-007
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 513 gggcagtacttctggtcgatgatgatggggt 543
|||||||||||||||||||||||||||||||
Sbjct: 466 gggcagtacttctggtcgatgatgatggggt 496
>gb|CZ889985.1|CZ889985 gy41b11.x1.b.screen Bread wheat methylation unfiltered library
(Bread_Wheat_U) Triticum aestivum genomic, DNA sequence
Length = 225
Score = 60.0 bits (30), Expect = 5e-007
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 513 gggcagtacttctggtcgatgatgatgggg 542
||||||||||||||||||||||||||||||
Sbjct: 143 gggcagtacttctggtcgatgatgatgggg 114
>gb|BF483450.1|BF483450 WHE2334_A09_A18ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2334_A09_A18, mRNA sequence
Length = 488
Score = 60.0 bits (30), Expect = 5e-007
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 702 cgccccaggctgccgacgctgatgccgtggcctgggccgcac 743
|||||||||||||||| ||||||||||||||| ||| |||||
Sbjct: 304 cgccccaggctgccgatgctgatgccgtggcccgggtcgcac 263
Score = 46.1 bits (23), Expect = 0.007
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 851 gtggatgccgtccgtgttggggctgtc 877
|||||||||||| ||||||||||||||
Sbjct: 155 gtggatgccgtcggtgttggggctgtc 129
>gb|BJ264150.1|BJ264150 BJ264150 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh12d18 3', mRNA sequence
Length = 686
Score = 60.0 bits (30), Expect = 5e-007
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 513 gggcagtacttctggtcgatgatgatgggg 542
||||||||||||||||||||||||||||||
Sbjct: 383 gggcagtacttctggtcgatgatgatgggg 412
>gb|BJ266186.1|BJ266186 BJ266186 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh25d18 3', mRNA sequence
Length = 557
Score = 60.0 bits (30), Expect = 5e-007
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 513 gggcagtacttctggtcgatgatgatgggg 542
||||||||||||||||||||||||||||||
Sbjct: 256 gggcagtacttctggtcgatgatgatgggg 285
>gb|BJ266660.1|BJ266660 BJ266660 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh27l09 3', mRNA sequence
Length = 677
Score = 60.0 bits (30), Expect = 5e-007
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 513 gggcagtacttctggtcgatgatgatgggg 542
||||||||||||||||||||||||||||||
Sbjct: 381 gggcagtacttctggtcgatgatgatgggg 410
Score = 52.0 bits (26), Expect = 1e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 778 ggccgatggagatgcagtcgtcgccg 803
||||||||||||||||||||||||||
Sbjct: 646 ggccgatggagatgcagtcgtcgccg 671
Score = 42.1 bits (21), Expect = 0.11
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 698 gtagcgccccaggctgccgacgctgatgccgtggcctgggccgca 742
|||||| || ||||| || ||||| ||||||||||| ||||||||
Sbjct: 566 gtagcggccgaggctaccaacgctcatgccgtggcccgggccgca 610
>gb|CD935721.1|CD935721 OV.102E15F010202 OV Triticum aestivum cDNA clone OV102E15, mRNA
sequence
Length = 693
Score = 60.0 bits (30), Expect = 5e-007
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 702 cgccccaggctgccgacgctgatgccgtggcctgggccgcac 743
|||||||||||||||| ||||||||||||||| ||| |||||
Sbjct: 172 cgccccaggctgccgatgctgatgccgtggcccgggtcgcac 131
Score = 40.1 bits (20), Expect = 0.45
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 524 ctggtcgatgatgatggggt 543
||||||||||||||||||||
Sbjct: 344 ctggtcgatgatgatggggt 325
>gb|CD935856.1|CD935856 OV.102K13F010202 OV Triticum aestivum cDNA clone OV102K13, mRNA
sequence
Length = 695
Score = 60.0 bits (30), Expect = 5e-007
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 702 cgccccaggctgccgacgctgatgccgtggcctgggccgcac 743
|||||||||||||||| ||||||||||||||| ||| |||||
Sbjct: 172 cgccccaggctgccgatgctgatgccgtggcccgggtcgcac 131
Score = 40.1 bits (20), Expect = 0.45
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 524 ctggtcgatgatgatggggt 543
||||||||||||||||||||
Sbjct: 344 ctggtcgatgatgatggggt 325
>gb|CD896286.1|CD896286 G174.102G03F010822 G174 Triticum aestivum cDNA clone G174102G03,
mRNA sequence
Length = 690
Score = 54.0 bits (27), Expect = 3e-005
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 851 gtggatgccgtccgtgttggggctgtc 877
|||||||||||||||||||||||||||
Sbjct: 232 gtggatgccgtccgtgttggggctgtc 206
Score = 44.1 bits (22), Expect = 0.029
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 783 atggagatgcagtcgtcgccgacgccgatg 812
||||||||||||||||||||| |||||||
Sbjct: 300 atggagatgcagtcgtcgccggtgccgatg 271
Score = 40.1 bits (20), Expect = 0.45
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 720 ctgatgccgtggcctgggccgcacttgacgcc 751
||||||||||| || ||||||||| |||||||
Sbjct: 363 ctgatgccgtgccccgggccgcacgtgacgcc 332
>gb|BE404485.1|BE404485 WHE0442_H04_O08ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0442_H04_O08, mRNA
sequence
Length = 632
Score = 46.1 bits (23), Expect = 0.007
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 851 gtggatgccgtccgtgttggggctgtc 877
|||||||||||| ||||||||||||||
Sbjct: 140 gtggatgccgtcggtgttggggctgtc 114
Score = 42.1 bits (21), Expect = 0.11
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 515 gcagtacttctggtcgatgatgatggggt 543
|||||| | ||||||||||||||||||||
Sbjct: 471 gcagtagtactggtcgatgatgatggggt 443
>gb|BF202204.1|BF202204 WHE1778_H03_O05ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1778_H03_O05, mRNA sequence
Length = 351
Score = 44.1 bits (22), Expect = 0.029
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 851 gtggatgccgtccgtgttggggctgt 876
|||||||||||| |||||||||||||
Sbjct: 318 gtggatgccgtcggtgttggggctgt 293
>gb|BG605368.1|BG605368 WHE2329_A04_A07ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2329_A04_A07, mRNA sequence
Length = 564
Score = 44.1 bits (22), Expect = 0.029
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 778 ggccgatggagatgcagtcgtc 799
||||||||||||||||||||||
Sbjct: 517 ggccgatggagatgcagtcgtc 496
>gb|BJ226169.1|BJ226169 BJ226169 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl25f11 5', mRNA sequence
Length = 579
Score = 44.1 bits (22), Expect = 0.029
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 514 ggcagtacttctggtcgatgatgatggggt 543
||||||| | ||||||||||||||||||||
Sbjct: 95 ggcagtagtactggtcgatgatgatggggt 66
>gb|BJ231070.1|BJ231070 BJ231070 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl25f11 3', mRNA sequence
Length = 551
Score = 44.1 bits (22), Expect = 0.029
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 514 ggcagtacttctggtcgatgatgatggggt 543
||||||| | ||||||||||||||||||||
Sbjct: 457 ggcagtagtactggtcgatgatgatggggt 486
>gb|BJ236635.1|BJ236635 BJ236635 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe22h09 5', mRNA sequence
Length = 637
Score = 44.1 bits (22), Expect = 0.029
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 770 gctcccggggccgatggagatgcagtcgtcgccg 803
|||||||||||||||||||| ||| ||| |||||
Sbjct: 386 gctcccggggccgatggagacgcattcgccgccg 353
>gb|BQ240401.1|BQ240401 TaE05018A07R TaE05 Triticum aestivum cDNA clone TaE05018A07R, mRNA
sequence
Length = 576
Score = 44.1 bits (22), Expect = 0.029
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1071 ccctgcccgtcgatggtgccgt 1092
||||||||||||||||||||||
Sbjct: 184 ccctgcccgtcgatggtgccgt 163
>gb|CK210095.1|CK210095 FGAS021886 Triticum aestivum FGAS: Library 5 GATE 7 Triticum aestivum
cDNA, mRNA sequence
Length = 1043
Score = 44.1 bits (22), Expect = 0.029
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1071 ccctgcccgtcgatggtgccgt 1092
||||||||||||||||||||||
Sbjct: 637 ccctgcccgtcgatggtgccgt 616
>gb|DR734786.1|DR734786 FGAS080540 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 837
Score = 44.1 bits (22), Expect = 0.029
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 831 acgttgctggagtcgccgatgtggatgccgtccgtgtt 868
|||| ||||||| ||||| ||||||||||||||||||
Sbjct: 645 acgtggctggagcagccgacgtggatgccgtccgtgtt 608
>gb|DR740261.1|DR740261 FGAS085189 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 1051
Score = 44.1 bits (22), Expect = 0.029
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1071 ccctgcccgtcgatggtgccgt 1092
||||||||||||||||||||||
Sbjct: 623 ccctgcccgtcgatggtgccgt 602
>gb|BF473363.1|BF473363 WHE0923_F04_L07ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0923_F04_L07, mRNA sequence
Length = 545
Score = 42.1 bits (21), Expect = 0.11
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 782 gatggagatgcagtcgtcgccgacgccgatggt 814
|||||||| ||||||||||||| |||||||||
Sbjct: 365 gatggagacgcagtcgtcgccggtgccgatggt 333
Score = 42.1 bits (21), Expect = 0.11
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 847 cgatgtggatgccgtccgtgttggggctgtcgccggg 883
||||||| | |||||| |||||||||||||| |||||
Sbjct: 300 cgatgtgcacgccgtcggtgttggggctgtccccggg 264
>gb|BJ259267.1|BJ259267 BJ259267 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh12d18 5', mRNA sequence
Length = 626
Score = 42.1 bits (21), Expect = 0.11
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 698 gtagcgccccaggctgccgacgctgatgccgtggcctgggccgca 742
|||||| || ||||| || ||||| ||||||||||| ||||||||
Sbjct: 488 gtagcggccgaggctaccaacgctcatgccgtggcccgggccgca 444
>gb|BJ260488.1|BJ260488 BJ260488 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh25d18 5', mRNA sequence
Length = 594
Score = 42.1 bits (21), Expect = 0.11
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 698 gtagcgccccaggctgccgacgctgatgccgtggcctgggccgca 742
|||||| || ||||| || ||||| ||||||||||| ||||||||
Sbjct: 529 gtagcggccgaggctaccaacgctcatgccgtggcccgggccgca 485
>gb|CA622651.1|CA622651 wl1n.pk0098.d7 wl1n Triticum aestivum cDNA clone wl1n.pk0098.d7 5'
end, mRNA sequence
Length = 437
Score = 42.1 bits (21), Expect = 0.11
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 515 gcagtacttctggtcgatgatgatggggt 543
|||||| | ||||||||||||||||||||
Sbjct: 30 gcagtagtactggtcgatgatgatggggt 2
>gb|CA622772.1|CA622772 wl1n.pk0099.d2 wl1n Triticum aestivum cDNA clone wl1n.pk0099.d2 5'
end, mRNA sequence
Length = 436
Score = 42.1 bits (21), Expect = 0.11
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 515 gcagtacttctggtcgatgatgatggggt 543
|||||| | ||||||||||||||||||||
Sbjct: 30 gcagtagtactggtcgatgatgatggggt 2
>gb|CD868569.1|CD868569 AZO2.109E15F001114 AZO2 Triticum aestivum cDNA clone AZO2109E15,
mRNA sequence
Length = 541
Score = 42.1 bits (21), Expect = 0.11
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 515 gcagtacttctggtcgatgatgatggggt 543
|||||| | ||||||||||||||||||||
Sbjct: 299 gcagtagtactggtcgatgatgatggggt 271
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 426,113
Number of Sequences: 636343
Number of extensions: 426113
Number of successful extensions: 122771
Number of sequences better than 0.5: 61
Number of HSP's better than 0.5 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122511
Number of HSP's gapped (non-prelim): 246
length of query: 1548
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1528
effective length of database: 354,513,379
effective search space: 541696443112
effective search space used: 541696443112
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)