BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3067267.2.1
(893 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK206879.1|CK206879 FGAS018490 Triticum aestivum FGAS: L... 741 0.0
gb|CV774695.1|CV774695 FGAS069095 Triticum aestivum FGAS: L... 652 0.0
gb|CD886625.1|CD886625 G118.102M18F010601 G118 Triticum aes... 617 e-175
gb|CD933449.1|CD933449 GR45.121A08F010719 GR45 Triticum aes... 416 e-114
gb|CD886626.1|CD886626 G118.102M18R010921 G118 Triticum aes... 315 3e-084
gb|CF133674.1|CF133674 WHE4361_G12_N23ZT Wheat meiotic flor... 295 3e-078
gb|DR740567.1|DR740567 FGAS000512 Triticum aestivum FGAS: L... 274 1e-071
gb|CA615601.1|CA615601 wr1.pk172.a5 wr1 Triticum aestivum c... 246 2e-063
gb|CA705161.1|CA705161 wdk1c.pk020.b19 wdk1c Triticum aesti... 228 5e-058
gb|CF133742.1|CF133742 WHE4362_G11_N22ZT Wheat meiotic flor... 222 3e-056
gb|CA626462.1|CA626462 wl1n.pk0137.e8 wl1n Triticum aestivu... 188 4e-046
gb|BQ753005.1|BQ753005 WHE4121_G09_M17ZS Wheat salt-stresse... 161 1e-037
gb|BJ300727.1|BJ300727 BJ300727 Y. Ogihara unpublished cDNA... 155 6e-036
gb|BJ279471.1|BJ279471 BJ279471 Y. Ogihara unpublished cDNA... 135 6e-030
gb|CK207710.1|CK207710 FGAS019366 Triticum aestivum FGAS: L... 135 6e-030
gb|BJ213945.1|BJ213945 BJ213945 Y. Ogihara unpublished cDNA... 111 8e-023
gb|CD873780.1|CD873780 AZO3.100K12F010925 AZO3 Triticum aes... 105 5e-021
gb|CV781253.1|CV781253 FGAS075664 Triticum aestivum FGAS: L... 105 5e-021
gb|BQ241633.1|BQ241633 TaE05002G05R TaE05 Triticum aestivum... 103 2e-020
gb|CA734209.1|CA734209 wde2f.pk002.f16 wde2f Triticum aesti... 101 8e-020
gb|CA705418.1|CA705418 wdk1c.pk014.m15 wdk1c Triticum aesti... 88 1e-015
gb|CV766847.1|CV766847 FGAS061234 Triticum aestivum FGAS: L... 82 8e-014
gb|CD927540.1|CD927540 GR45.102H04F010316 GR45 Triticum aes... 74 2e-011
gb|CK153730.1|CK153730 FGAS032383 Triticum aestivum FGAS: T... 60 3e-007
gb|CA644070.1|CA644070 wre1n.pk0076.g8 wre1n Triticum aesti... 56 4e-006
gb|BE427329.1|BE427329 PSR6253 ITEC PSR Wheat Pericarp/Test... 54 2e-005
gb|BJ260717.1|BJ260717 BJ260717 Y. Ogihara unpublished cDNA... 54 2e-005
gb|BJ269215.1|BJ269215 BJ269215 Y. Ogihara unpublished cDNA... 54 2e-005
gb|CD865940.1|CD865940 AZO2.102C16F010112 AZO2 Triticum aes... 54 2e-005
gb|CK161359.1|CK161359 FGAS013927 Triticum aestivum FGAS: L... 54 2e-005
gb|BE405597.1|BE405597 WHE1209_B09_C17ZS Wheat etiolated se... 52 7e-005
gb|BE405611.1|BE405611 WHE1209_D03_G05ZS Wheat etiolated se... 52 7e-005
gb|BQ241727.1|BQ241727 TaE05001E12R TaE05 Triticum aestivum... 52 7e-005
gb|AJ614974.1|AJ614974 AJ614974 Triticum turgidum subsp. du... 52 7e-005
gb|CV768354.1|CV768354 FGAS062745 Triticum aestivum FGAS: L... 52 7e-005
gb|BJ221424.1|BJ221424 BJ221424 Y. Ogihara unpublished cDNA... 50 3e-004
gb|CA701380.1|CA701380 wkm2c.pk005.p12 wkm2c Triticum aesti... 50 3e-004
gb|BJ221538.1|BJ221538 BJ221538 Y. Ogihara unpublished cDNA... 46 0.004
gb|BJ284457.1|BJ284457 BJ284457 Y. Ogihara unpublished cDNA... 46 0.004
gb|BJ306530.1|BJ306530 BJ306530 Y. Ogihara unpublished cDNA... 46 0.004
gb|BQ578325.1|BQ578325 WHE0301_F05_K09ZS Wheat unstressed s... 46 0.004
gb|BJ269180.1|BJ269180 BJ269180 Y. Ogihara unpublished cDNA... 42 0.065
gb|BJ274128.1|BJ274128 BJ274128 Y. Ogihara unpublished cDNA... 42 0.065
gb|CA597297.1|CA597297 wpa1c.pk016.j20 wpa1c Triticum aesti... 42 0.065
gb|BF292906.1|BF292906 WHE2166_C05_F10ZS Triticum turgidum ... 40 0.26
gb|CK199160.1|CK199160 FGAS007654 Triticum aestivum FGAS: L... 40 0.26
>gb|CK206879.1|CK206879 FGAS018490 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1012
Score = 741 bits (374), Expect = 0.0
Identities = 668/767 (87%)
Strand = Plus / Plus
Query: 10 caggtctattatcaccttggaaaggcatattactgtttggtccacctggaacaggaaaga 69
||||||| |||||||| ||||| || ||||| || ||||||||||| |||||||||||||
Sbjct: 36 caggtctgttatcaccctggaacggtatattgctatttggtccaccaggaacaggaaaga 95
Query: 70 caatgctagctaaagctgtggctactgagtgcaaaacaacttttttcaatatttctgcct 129
||||||| || |||||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 96 caatgctggcaaaagctgtggctaccgagtgcaaaacaacttttttcaacatttcagcct 155
Query: 130 cgtcgattgtaagcaagtggcgcggtgactcggagaaactagtgaaagtgttattcgaac 189
| || ||||| ||||| ||||| |||||||||||||||||||| ||||| ||||| || |
Sbjct: 156 catcaattgtcagcaaatggcgtggtgactcggagaaactagtaaaagtcttatttgagc 215
Query: 190 ttgcaaggcatcatgcaccatctactattttccttgatgagattgatgctatcattagtc 249
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 216 ttgcaaggcatcatgcaccatctaccattttccttgatgagattgatgctatcattagcc 275
Query: 250 aacgtggtgaagctcgtagtgaacatgaagctagccggcgattgaaaactgagctattaa 309
||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||||
Sbjct: 276 aacgtggtgaagctcgtagtgaacatgaagccagtcggcgattgaagactgaactattaa 335
Query: 310 tacagatggatgggttgactaagacagatgagcttgtttttgttctagcagcaacaaatt 369
||||||||||||| |||||||||||||||||||||||||||||||| || || |||||||
Sbjct: 336 tacagatggatggattgactaagacagatgagcttgtttttgttctggcggccacaaatt 395
Query: 370 taccatgggagttggatgcagcaatgctgcgtcggctggagaagcgtattcttgttccat 429
|||| ||||| | || ||||||||| | || || |||| || ||||||||||| || |
Sbjct: 396 taccttgggaactagacgcagcaatgttacgccgattggaaaaacgtattcttgtgccct 455
Query: 430 tgccagagccggatgctagacatgctatgtttgaagagctcctgccatatacacctggca 489
| |||||| | || ||||| |||||||||||||||||| |||| |||| || || | |
Sbjct: 456 taccagaggcagaagctaggcatgctatgtttgaagagttccttccatcgactccagata 515
Query: 490 caatggagattccctatgatgttcttgtggagaaaactgaaggatattctggctctgata 549
||||||||||||| |||||||||||||||||||| || ||||||||||| ||||||||||
Sbjct: 516 caatggagattccatatgatgttcttgtggagaacaccgaaggatattccggctctgata 575
Query: 550 ttcgcctggtatgcaaggaagcagcaatgcagcccctaagacgggtaatggcagttcttg 609
| ||||| || || ||||| ||||||||||| || || |||||| ||||||||||||| |
Sbjct: 576 tacgccttgtctgtaaggaggcagcaatgcaaccacttagacggttaatggcagttctag 635
Query: 610 aaggcaggaaagaagaggtccctgagggtgagttgcctgaagttggcccagtaactacag 669
||||||| ||||||| | || |||| |||||||||||||||||| ||| || | |||
Sbjct: 636 aaggcagacaagaagaaatgccagaggatgagttgcctgaagttggnccaatagcggcag 695
Query: 670 aagatattgaacttgctttgaggaatacaagaccgtctgctcatcttcatgcacatagat 729
||||||| |||||||| |||||||||||| | ||||||||||||| |||||||||||||
Sbjct: 696 aagatatcgaacttgccttgaggaatacacggncgtctgctcatctccatgcacatagat 755
Query: 730 acgaaaagttcaaccaagattatggcagtcatgtccatggctaaagg 776
| || || ||||| |||||||||||| |||||| ||||||||||
Sbjct: 756 atgagaaattcaantcagattatggcagccatgtcattggctaaagg 802
>gb|CV774695.1|CV774695 FGAS069095 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 836
Score = 652 bits (329), Expect = 0.0
Identities = 618/712 (86%), Gaps = 2/712 (0%)
Strand = Plus / Plus
Query: 10 caggtctattatcacc-ttggaaaggcatattactgtttggtccacctggaacaggaaag 68
||||||| |||||||| | ||||||| ||||| || ||||||||||| ||||||||||||
Sbjct: 125 caggtctgttatcaccctnggaaaggtatattgctatttggtccaccaggaacaggaaag 184
Query: 69 acaatgctagctaaagctgtggctactgagtgcaaaacaacttttttcaatatttctgcc 128
|||||||| || |||||||||||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 185 acaatgctggcaaaagctgtggctaccgagtgcaaaacaacttttttcaacatttcagcc 244
Query: 129 tcgtcgattgtaagcaagtggcgcggtgactcggagaaactagtgaaagtgttattcgaa 188
|| || ||||| ||||| ||||| |||||||||||||||||||| ||||| ||||| ||
Sbjct: 245 tcatcaattgtcagcaaatggcgtggtgactcggagaaactagtaaaagtcttatttgag 304
Query: 189 cttgcaaggcatcatgcaccatctactattttccttgatgagattgatgctatcattagt 248
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 305 cttgcaaggcatcatgcaccatctaccattttccttgatgagattgatgccatcattagc 364
Query: 249 caacgtggtgaagctcgtagtgaacatgaagctagccggcgattgaaaactgagctatta 308
|||||||||||||||||||||||||||||||| || ||||||||||| ||||| ||||||
Sbjct: 365 caacgtggtgaagctcgtagtgaacatgaagccagtcggcgattgaagactgaactatta 424
Query: 309 atacagatggatgggttgactaagacagatgagcttgtttttgttctagcagcaacaaat 368
||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||
Sbjct: 425 atacagatggatgggttgactaagacagatgagcttgtttttgttctggcggccacaaat 484
Query: 369 ttaccatgggagttggatgcagcaatgctgcgtcggctggagaagcgtattcttgttcca 428
||||| ||||| | |||||||||||| | || || |||| || ||||||||||| ||
Sbjct: 485 ttaccttgggaactagatgcagcaatgttacgccgattggaaaaacgtattcttgtgccc 544
Query: 429 ttgccagagccggatgctagacatgctatgtttgaagagctcctgccatatacacctggc 488
|| |||||| | || || || |||||||||||||||||| |||| |||| || || | |
Sbjct: 545 ttaccagaggcagaagccaggcatgctatgtttgaagagttccttccatcgactccagac 604
Query: 489 acaatggagattccctatgatgttcttgtggagaaaactgaaggatattctggctctgat 548
|||||||||||||| ||||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 605 acaatggagattccatatgatgttcttgtggagagcaccgaaggatattccggctctgat 664
Query: 549 attcgcctggtatgcaaggaagcagcaatgcagcccctaagacgggtaatggcagttctt 608
|| ||||| || || ||||| ||||||||||| || || |||||| |||||||||||||
Sbjct: 665 atacgccttgtttgtaaggaggcagcaatgcaaccacttagacggttaatggcagttcta 724
Query: 609 gaaggcaggaaagaagaggtccctgagggtgagttgcctgaagttggcccagtaactaca 668
|||||||| ||||||| | || || | ||||||| ||||| | ||||| || | ||
Sbjct: 725 gaaggcagacaagaagaaatgccagaagatgagttggctgaaagttgcccaatagcggca 784
Query: 669 gaagatattgaacttgctttgaggaatacaagaccgtctgctcatcttcatg 720
||||||||| |||||| |||||||||||| | |||||||||||||| ||||
Sbjct: 785 aaagatattg-acttgccttgaggaatacacggccgtctgctcatctccatg 835
>gb|CD886625.1|CD886625 G118.102M18F010601 G118 Triticum aestivum cDNA clone G118102M18,
mRNA sequence
Length = 624
Score = 617 bits (311), Expect = e-175
Identities = 536/611 (87%)
Strand = Plus / Plus
Query: 154 gtgactcggagaaactagtgaaagtgttattcgaacttgcaaggcatcatgcaccatcta 213
||||||||||||||||||| ||||| ||||| || |||||||||||||||||||||||||
Sbjct: 11 gtgactcggagaaactagtaaaagtcttatttgagcttgcaaggcatcatgcaccatcta 70
Query: 214 ctattttccttgatgagattgatgctatcattagtcaacgtggtgaagctcgtagtgaac 273
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 71 ccattttccttgatgagattgatgctatcattagccaacgtggtgaagctcgtagtgaac 130
Query: 274 atgaagctagccggcgattgaaaactgagctattaatacagatggatgggttgactaaga 333
||||||| || |||||| |||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 131 atgaagccagtcggcgactgaagactgaactattaatacagatggatgggttgactaaga 190
Query: 334 cagatgagcttgtttttgttctagcagcaacaaatttaccatgggagttggatgcagcaa 393
|||||||||||||||||||||| || || ||||||||||||||||| | ||||||||||
Sbjct: 191 cagatgagcttgtttttgttctggcggccacaaatttaccatgggaactagatgcagcaa 250
Query: 394 tgctgcgtcggctggagaagcgtattcttgttccattgccagagccggatgctagacatg 453
|| | || || |||| || ||||||||||| || || |||||| | || ||||| ||||
Sbjct: 251 tgttacgccgattggaaaaacgtattcttgtgcccttaccagaggcagaagctaggcatg 310
Query: 454 ctatgtttgaagagctcctgccatatacacctggcacaatggagattccctatgatgttc 513
|||||||||||||| |||| |||| || || | ||||||| ||||||| ||||||||||
Sbjct: 311 ctatgtttgaagagttccttccatcgactccagacacaatgaagattccatatgatgttc 370
Query: 514 ttgtggagaaaactgaaggatattctggctctgatattcgcctggtatgcaaggaagcag 573
|||||||||| |||||||||||||| ||||||||||| ||||| || || ||||| ||||
Sbjct: 371 ttgtggagaacactgaaggatattccggctctgatatacgccttgtttgtaaggaggcag 430
Query: 574 caatgcagcccctaagacgggtaatggcagttcttgaaggcaggaaagaagaggtccctg 633
||||||| || || |||||| ||||||||||||| |||||||| ||||||| | || |
Sbjct: 431 caatgcaaccacttagacggttaatggcagttctagaaggcagacaagaagaaatgccag 490
Query: 634 agggtgagttgcctgaagttggcccagtaactacagaagatattgaacttgctttgagga 693
||| |||||||||||||||||||||| || | |||||||||| |||||||| |||||||
Sbjct: 491 aggatgagttgcctgaagttggcccaatagcggcagaagatatcgaacttgccttgagga 550
Query: 694 atacaagaccgtctgctcatcttcatgcacatagatacgaaaagttcaaccaagattatg 753
||||| | |||||||||||||| ||||||||||||| || || ||||| ||||||||||
Sbjct: 551 atacacggccgtctgctcatctccatgcacatagatctgagaaattcaatcaagattatg 610
Query: 754 gcagtcatgtc 764
| || ||||||
Sbjct: 611 ggagccatgtc 621
>gb|CD933449.1|CD933449 GR45.121A08F010719 GR45 Triticum aestivum cDNA clone GR45121A08,
mRNA sequence
Length = 522
Score = 416 bits (210), Expect = e-114
Identities = 399/462 (86%)
Strand = Plus / Plus
Query: 303 ctattaatacagatggatgggttgactaagacagatgagcttgtttttgttctagcagca 362
||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 36 ctattaatacagatggatgggttgactaagacagatgagcttgtttttgttctggcggcc 95
Query: 363 acaaatttaccatgggagttggatgcagcaatgctgcgtcggctggagaagcgtattctt 422
||||||||||||||||| | |||||||||||| | || || |||| || |||||||||
Sbjct: 96 acaaatttaccatgggaactagatgcagcaatgttacgccgattggaaaaacgtattctt 155
Query: 423 gttccattgccagagccggatgctagacatgctatgtttgaagagctcctgccatataca 482
|| || || |||||| | || ||||| |||||||||||||||||| |||| |||| ||
Sbjct: 156 gtgcccttaccagaggcagaagctaggcatgctatgtttgaagagttccttccatcgact 215
Query: 483 cctggcacaatggagattccctatgatgttcttgtggagaaaactgaaggatattctggc 542
|| | ||||||| ||||||| |||||||||||||||||||| |||||||||||||| |||
Sbjct: 216 ccagacacaatgaagattccatatgatgttcttgtggagaacactgaaggatattccggc 275
Query: 543 tctgatattcgcctggtatgcaaggaagcagcaatgcagcccctaagacgggtaatggca 602
|||||||| ||||| || || ||||| ||||||||||| || || |||||| ||||||||
Sbjct: 276 tctgatatacgccttgtttgtaaggaggcagcaatgcaaccacttagacggttaatggca 335
Query: 603 gttcttgaaggcaggaaagaagaggtccctgagggtgagttgcctgaagttggcccagta 662
||||| |||||||| ||||||| | || |||| |||||||||||||||||||||| ||
Sbjct: 336 gttctagaaggcagacaagaagaaatgccagaggatgagttgcctgaagttggcccaata 395
Query: 663 actacagaagatattgaacttgctttgaggaatacaagaccgtctgctcatcttcatgca 722
| |||||||||| |||||||| |||||||||||| | ||||||||||||| ||||||
Sbjct: 396 gcggcagaagatatcgaacttgccttgaggaatacacgggcgtctgctcatctccatgca 455
Query: 723 catagatacgaaaagttcaaccaagattatggcagtcatgtc 764
|||||||| || || ||||| |||||||||||||| ||||||
Sbjct: 456 catagatatgagaaattcaatcaagattatggcagccatgtc 497
>gb|CD886626.1|CD886626 G118.102M18R010921 G118 Triticum aestivum cDNA clone G118102M18,
mRNA sequence
Length = 654
Score = 315 bits (159), Expect = 3e-084
Identities = 312/363 (85%)
Strand = Plus / Minus
Query: 414 cgtattcttgttccattgccagagccggatgctagacatgctatgtttgaagagctcctg 473
||||||||||| || || |||||| | || ||||| |||||||||||||||||| ||||
Sbjct: 642 cgtattcttgtgcccttaccagaggcagaagctaggcatgctatgtttgaagagttcctt 583
Query: 474 ccatatacacctggcacaatggagattccctatgatgttcttgtggagaaaactgaagga 533
|||| || || | ||||||| ||||||| |||||||||||||||||||| |||||||||
Sbjct: 582 ccatcgactccagacacaatgaagattccatatgatgttcttgtggagaacactgaagga 523
Query: 534 tattctggctctgatattcgcctggtatgcaaggaagcagcaatgcagcccctaagacgg 593
||||| ||||||||||| ||||| || || ||||| ||||||||||| || || ||||||
Sbjct: 522 tattccggctctgatatacgccttgtttgtaaggaggcagcaatgcaaccacttagacgg 463
Query: 594 gtaatggcagttcttgaaggcaggaaagaagaggtccctgagggtgagttgcctgaagtt 653
||||||||||||| |||||||| ||||||| | || |||| ||||||||||||||||
Sbjct: 462 ttaatggcagttctagaaggcagacaagaagaaatgccagaggatgagttgcctgaagtt 403
Query: 654 ggcccagtaactacagaagatattgaacttgctttgaggaatacaagaccgtctgctcat 713
|||||| || | |||||||||| |||||||| |||||||||||| | ||||||||||||
Sbjct: 402 ggcccaatagcggcagaagatatcgaacttgccttgaggaatacacggccgtctgctcat 343
Query: 714 cttcatgcacatagatacgaaaagttcaaccaagattatggcagtcatgtccatggctaa 773
|| |||||||||||||| || || ||||| |||||||||||||| |||||| |||||||
Sbjct: 342 ctccatgcacatagatatgagaaattcaatcaagattatggcagccatgtcattggctaa 283
Query: 774 agg 776
|||
Sbjct: 282 agg 280
>gb|CF133674.1|CF133674 WHE4361_G12_N23ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4361_G12_N23, mRNA sequence
Length = 765
Score = 295 bits (149), Expect = 3e-078
Identities = 347/413 (84%)
Strand = Plus / Plus
Query: 12 ggtctattatcaccttggaaaggcatattactgtttggtccacctggaacaggaaagaca 71
|||||| ||||||| ||||||||||| ||||| |||||||| ||||||||||| ||||||
Sbjct: 193 ggtctactatcaccgtggaaaggcatcttactttttggtcctcctggaacagggaagaca 252
Query: 72 atgctagctaaagctgtggctactgagtgcaaaacaacttttttcaatatttctgcctcg 131
||||| || ||||| || |||||||||||||| || || || ||||| ||||| || ||
Sbjct: 253 atgctggcaaaagcagttgctactgagtgcaatactacattcttcaacatttcagcttca 312
Query: 132 tcgattgtaagcaagtggcgcggtgactcggagaaactagtgaaagtgttattcgaactt 191
|| ||||| ||||| ||||| || || || ||||| ||||| ||||| | || || |||
Sbjct: 313 tcaattgtcagcaaatggcgtggagattctgagaagctagtcaaagttctttttgagctt 372
Query: 192 gcaaggcatcatgcaccatctactattttccttgatgagattgatgctatcattagtcaa 251
||||| |||||||||||||| || || || |||||||||||||||||||| ||||||||
Sbjct: 373 gcaagacatcatgcaccatcaacaatatttcttgatgagattgatgctattattagtcag 432
Query: 252 cgtggtgaagctcgtagtgaacatgaagctagccggcgattgaaaactgagctattaata 311
|||||||||||||||||||| ||||||||||| || || ||||| ||||||||| | ||
Sbjct: 433 cgtggtgaagctcgtagtgagcatgaagctagtcgacgcttgaagactgagctacttatt 492
Query: 312 cagatggatgggttgactaagacagatgagcttgtttttgttctagcagcaacaaattta 371
||||||||||| ||||| || || | || | || ||||| || |||||||||||| ||
Sbjct: 493 cagatggatggcttgacaaaaacgaacgacttagtatttgtgcttgcagcaacaaatcta 552
Query: 372 ccatgggagttggatgcagcaatgctgcgtcggctggagaagcgtattcttgt 424
|||||||| || |||||||| ||||| |||||||| |||||||| ||||||||
Sbjct: 553 ccatgggaattagatgcagctatgctccgtcggcttgagaagcggattcttgt 605
>gb|DR740567.1|DR740567 FGAS000512 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1094
Score = 274 bits (138), Expect = 1e-071
Identities = 345/413 (83%), Gaps = 1/413 (0%)
Strand = Plus / Plus
Query: 12 ggtctattatcaccttggaaaggcatattactgtttggtccacctggaacaggaaagaca 71
|||||| ||||||| ||||||||||| ||||| |||||||| ||||||||||| ||||||
Sbjct: 478 ggtctactatcaccgtggaaaggcatcttactttttggtcctcctggaacagggaagaca 537
Query: 72 atgctagctaaagctgtggctactgagtgcaaaacaacttttttcaatatttctgcctcg 131
||||| || ||||| || |||||||||||||| || || || ||||| ||||| || ||
Sbjct: 538 atgctggcaaaagcagttgctactgagtgcaatactacattcttcaacatttcagcttca 597
Query: 132 tcgattgtaagcaagtggcgcggtgactcggagaaactagtgaaagtgttattcgaactt 191
|| ||||| ||||| ||||| || || || ||||| ||||| ||||| | || || |||
Sbjct: 598 tcaattgtcagcaaatggcgtggagattctgagaagctagtcaaagttctttttgagctt 657
Query: 192 gcaaggcatcatgcaccatctactattttccttgatgagattgatgctatcattagtcaa 251
||||| |||||||||||||| || || || |||||||||||||||||||| ||||||||
Sbjct: 658 gcaagacatcatgcaccatcaacaatatttcttgatgagattgatgctattattagtcag 717
Query: 252 cgtggtgaagctcgtagtgaacatgaagctagccggcgattgaaaactgagctattaata 311
|||||||||||||||||||| ||||||||||| || || ||||| ||||||||| | ||
Sbjct: 718 cgtggtgaagctcgtagtgagcatgaagctagtcgacgcttgaagactgagctacttatn 777
Query: 312 cagatggatgggttgactaagacagatgagcttgtttttgttctagcagcaacaaattta 371
||||||||||| ||||| || || | || | || ||||| || |||||||| ||| ||
Sbjct: 778 cagatggatggcttgacaaaaacgaacgacttagtatttgtgcttgcagcaaccaatcta 837
Query: 372 ccatgggagttggatgcagcaatgctgcgtcggctggagaagcgtattcttgt 424
|||||||| || |||||||| ||||| |||||| | |||||||| ||||||||
Sbjct: 838 ccatgggaattagatgcagctatgctccgtcgg-ttgagaagcggattcttgt 889
>gb|CA615601.1|CA615601 wr1.pk172.a5 wr1 Triticum aestivum cDNA clone wr1.pk172.a5 5' end,
mRNA sequence
Length = 614
Score = 246 bits (124), Expect = 2e-063
Identities = 232/268 (86%)
Strand = Plus / Minus
Query: 497 gattccctatgatgttcttgtggagaaaactgaaggatattctggctctgatattcgcct 556
|||||| ||||||||||||||||||| || ||||||||||| ||||||||||| |||||
Sbjct: 502 gattccatatgatgttcttgtggagagcaccgaaggatattccggctctgatatacgcct 443
Query: 557 ggtatgcaaggaagcagcaatgcagcccctaagacgggtaatggcagttcttgaaggcag 616
|| || ||||| ||||||||||| || || |||||| ||||||||||||| ||||||||
Sbjct: 442 tgtttgtaaggaggcagcaatgcaaccacttagacggttaatggcagttctagaaggcag 383
Query: 617 gaaagaagaggtccctgagggtgagttgcctgaagttggcccagtaactacagaagatat 676
||||||| | || |||| |||||||||||||||||||||| || | ||||||||||
Sbjct: 382 acaagaagaaatgccagaggatgagttgcctgaagttggcccaatagcggcagaagatat 323
Query: 677 tgaacttgctttgaggaatacaagaccgtctgctcatcttcatgcacatagatacgaaaa 736
||||||||| |||||||||||| | |||||||||||||| |||||||||||||| || |
Sbjct: 322 tgaacttgccttgaggaatacacggccgtctgctcatctccatgcacatagatatgagca 263
Query: 737 gttcaaccaagattatggcagtcatgtc 764
||||| |||||||||||||| ||||||
Sbjct: 262 attcaatcaagattatggcagccatgtc 235
>gb|CA705161.1|CA705161 wdk1c.pk020.b19 wdk1c Triticum aestivum cDNA clone wdk1c.pk020.b19
5' end, mRNA sequence
Length = 510
Score = 228 bits (115), Expect = 5e-058
Identities = 321/386 (83%), Gaps = 4/386 (1%)
Strand = Plus / Plus
Query: 345 gtttttgttctagcagcaacaaatttaccatgggagttggatgcagcaatgctgcgtcgg 404
|||||| |||| || || ||||||||||||||||| | |||||||||||| | || ||
Sbjct: 6 gtttttnttctggcggccacaaatttaccatgggaactagatgcagcaatgttacgccga 65
Query: 405 ctggagaagcgtattcttgttccattgccagagccggatgctagacatgctatgtttgaa 464
|||| || ||||||||||| || || |||||| | || ||||| |||||||||||||||
Sbjct: 66 ttggaaaaacgtattcttgtgcccttaccagaggcagaagctaggcatgctatgtttgaa 125
Query: 465 gagctcctgccatatacacctggcacaatggagattccctatgatgttcttgtggagaaa 524
||| |||| |||| || || | ||||||| ||||||| ||||||||||||||||||||
Sbjct: 126 gagttccttccatcgactccagacacaatgaagattccatatgatgttcttgtggagaac 185
Query: 525 actgaaggatattctggctctgatattcgcctggtatgcaaggaagcagcaatgcagcc- 583
|||||||||||||| ||||||||||| ||||| || || ||||| ||||||||||| ||
Sbjct: 186 actgaaggatattccggctctgatatacgccttgtttgtaaggaggcagcaatgcaacca 245
Query: 584 cctaagacgggtaatggc-agttcttgaaggcaggaaagaagaggtccctgagggtg-ag 641
| |||||||| ||||||| |||||| |||||||| ||||||| | || ||| || ||
Sbjct: 246 cttaagacggttaatggcaagttctagaaggcagacaagaagaaatgccanaggatgaag 305
Query: 642 ttgcctgaagttggcccagtaactacagaagatattgaacttgctttgaggaataca-ag 700
|||||||||||||||||| || | |||||||||| ||||||| |||||||||| | |
Sbjct: 306 ttgcctgaagttggcccaatagcggcagaagatatcnaacttgccttgaggaatanacgg 365
Query: 701 accgtctgctcatcttcatgcacata 726
||||||||||||| ||||||||||
Sbjct: 366 gncgtctgctcatctccatgcacata 391
>gb|CF133742.1|CF133742 WHE4362_G11_N22ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4362_G11_N22, mRNA sequence
Length = 775
Score = 222 bits (112), Expect = 3e-056
Identities = 232/272 (85%)
Strand = Plus / Plus
Query: 12 ggtctattatcaccttggaaaggcatattactgtttggtccacctggaacaggaaagaca 71
|||||| ||||||| ||||||||||| ||||| |||||||| ||||||||||| ||||||
Sbjct: 493 ggtctactatcaccgtggaaaggcatcttactttttggtcctcctggaacagggaagaca 552
Query: 72 atgctagctaaagctgtggctactgagtgcaaaacaacttttttcaatatttctgcctcg 131
||||| || ||||| || |||||||||||||| || || || ||||| ||||| || ||
Sbjct: 553 atgctggcaaaagcagttgctactgagtgcaatactacattcttcaacatttcggcttca 612
Query: 132 tcgattgtaagcaagtggcgcggtgactcggagaaactagtgaaagtgttattcgaactt 191
|| ||||| ||||| ||||| || || || ||||| ||||| ||||| | || || |||
Sbjct: 613 tcaattgtcagcaaatggcgtggagattctgagaagctagtcaaagttctttttgagctt 672
Query: 192 gcaaggcatcatgcaccatctactattttccttgatgagattgatgctatcattagtcaa 251
||||| |||||||||||||| || || || |||||||||||||||||||| ||||||||
Sbjct: 673 gcaagacatcatgcaccatcaacaatatttcttgatgagattgatgctattattagtcag 732
Query: 252 cgtggtgaagctcgtagtgaacatgaagctag 283
|||||||||||||||||||| |||||||||||
Sbjct: 733 cgtggtgaagctcgtagtgagcatgaagctag 764
>gb|CA626462.1|CA626462 wl1n.pk0137.e8 wl1n Triticum aestivum cDNA clone wl1n.pk0137.e8 5'
end, mRNA sequence
Length = 509
Score = 188 bits (95), Expect = 4e-046
Identities = 255/309 (82%)
Strand = Plus / Plus
Query: 27 tggaaaggcatattactgtttggtccacctggaacaggaaagacaatgctagctaaagct 86
||||||||||| ||||| ||||| || || || ||||||||||||||||| || |||||
Sbjct: 150 tggaaaggcatcttactttttggccccccagggacaggaaagacaatgctggcaaaagcg 209
Query: 87 gtggctactgagtgcaaaacaacttttttcaatatttctgcctcgtcgattgtaagcaag 146
|| ||||||||||||||||| || || ||||| ||||| || || || ||||| |||||
Sbjct: 210 gtcgctactgagtgcaaaaccaccttcttcaacatttcagcatcatcaattgtcagcaaa 269
Query: 147 tggcgcggtgactcggagaaactagtgaaagtgttattcgaacttgcaaggcatcatgca 206
||||| || || || ||||| || || ||||| | || || ||||| ||||||||||||
Sbjct: 270 tggcgtggagattcagagaagcttgtcaaagttctgtttgagcttgctaggcatcatgca 329
Query: 207 ccatctactattttccttgatgagattgatgctatcattagtcaacgtggtgaagctcgt 266
||||| || || ||||||||||| || ||||||||||| || || ||||||||||||||
Sbjct: 330 ccatccacaatattccttgatgaaatagatgctatcatcagccagcgtggtgaagctcgc 389
Query: 267 agtgaacatgaagctagccggcgattgaaaactgagctattaatacagatggatgggttg 326
||||| |||||||||| || || ||||| ||||||||| | || || |||||||| |||
Sbjct: 390 agtgagcatgaagctaatcgtcgcttgaagactgagctacttattcanatggatggnttg 449
Query: 327 actaagaca 335
|| ||||||
Sbjct: 450 acaaagaca 458
>gb|BQ753005.1|BQ753005 WHE4121_G09_M17ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4121_G09_M17, mRNA sequence
Length = 693
Score = 161 bits (81), Expect = 1e-037
Identities = 192/229 (83%)
Strand = Plus / Plus
Query: 12 ggtctattatcaccttggaaaggcatattactgtttggtccacctggaacaggaaagaca 71
|||||| ||||||| ||||||||||| ||||| |||||||| ||||||||||| ||||||
Sbjct: 465 ggtctactatcaccgtggaaaggcatcttactttttggtcctcctggaacagggaagaca 524
Query: 72 atgctagctaaagctgtggctactgagtgcaaaacaacttttttcaatatttctgcctcg 131
||||| || ||||| || |||||||||||||| || || || ||||| ||||| || ||
Sbjct: 525 atgctggcaaaagcagttgctactgagtgcaatactacattcttcaacatttcagcttca 584
Query: 132 tcgattgtaagcaagtggcgcggtgactcggagaaactagtgaaagtgttattcgaactt 191
|| ||||| ||||| ||||| || || || ||||| ||||| ||||| | || || |||
Sbjct: 585 tcaattgtcagcaaatggcgtggagattctgagaagctagtcaaagttctttttgagctt 644
Query: 192 gcaaggcatcatgcaccatctactattttccttgatgagattgatgcta 240
||||| |||||||||||||| || || || |||||||||||||||||||
Sbjct: 645 gcaagacatcatgcaccatcaacaatatttcttgatgagattgatgcta 693
>gb|BJ300727.1|BJ300727 BJ300727 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd4a09 5', mRNA sequence
Length = 694
Score = 155 bits (78), Expect = 6e-036
Identities = 192/230 (83%)
Strand = Plus / Plus
Query: 12 ggtctattatcaccttggaaaggcatattactgtttggtccacctggaacaggaaagaca 71
|||||| ||||||| ||||||||||| ||||| |||||||| ||||||||||| ||||||
Sbjct: 465 ggtctactatcaccgtggaaaggcatcttactttttggtcctcctggaacagggaagaca 524
Query: 72 atgctagctaaagctgtggctactgagtgcaaaacaacttttttcaatatttctgcctcg 131
||||| || ||||| || |||||||||||||| || || || ||||| || || || ||
Sbjct: 525 atgctggcaaaagcagttgctactgagtgcaatactacattcttcaacatctcggcttca 584
Query: 132 tcgattgtaagcaagtggcgcggtgactcggagaaactagtgaaagtgttattcgaactt 191
|| ||||| ||||| ||||| || || || ||||| ||||| ||||| | || || |||
Sbjct: 585 tcaattgtcagcaaatggcgtggagattctgagaagctagtcaaagttctttttgagctt 644
Query: 192 gcaaggcatcatgcaccatctactattttccttgatgagattgatgctat 241
||||| |||||||||||||| || || || ||||||||||||||||||||
Sbjct: 645 gcaagacatcatgcaccatcaacaatatttcttgatgagattgatgctat 694
>gb|BJ279471.1|BJ279471 BJ279471 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr3b18 5', mRNA sequence
Length = 663
Score = 135 bits (68), Expect = 6e-030
Identities = 182/220 (82%)
Strand = Plus / Plus
Query: 12 ggtctattatcaccttggaaaggcatattactgtttggtccacctggaacaggaaagaca 71
|||||| ||||||| ||||||||||| ||||| |||||||| ||||||||||| ||||||
Sbjct: 444 ggtctactatcaccgtggaaaggcatcttactttttggtcctcctggaacagggaagaca 503
Query: 72 atgctagctaaagctgtggctactgagtgcaaaacaacttttttcaatatttctgcctcg 131
||||| || ||||| || |||||||||||||| || || || ||||| || || || ||
Sbjct: 504 atgctggcaaaagcagttgctactgagtgcaatactacattcttcaacatctcggcttca 563
Query: 132 tcgattgtaagcaagtggcgcggtgactcggagaaactagtgaaagtgttattcgaactt 191
|| ||||| ||||| ||||| || || || ||||| ||||| ||||| | || || |||
Sbjct: 564 tcaattgtcagcaaatggcgtggagattctgagaagctagtcaaagttctttttgagctt 623
Query: 192 gcaaggcatcatgcaccatctactattttccttgatgaga 231
||||| |||||||||||||| || || || ||||||||||
Sbjct: 624 gcaagacatcatgcaccatcaacaatatttcttgatgaga 663
>gb|CK207710.1|CK207710 FGAS019366 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1125
Score = 135 bits (68), Expect = 6e-030
Identities = 192/232 (82%), Gaps = 1/232 (0%)
Strand = Plus / Minus
Query: 193 caaggcatcatgcaccatctactattttccttgatgagattgatgctatcattagtcaac 252
|||| ||||||||||| || || || || || |||||||| |||||||| |||||||| |
Sbjct: 972 caagacatcatgcaccttcaacaatatttctggatgagatggatgctattattagtcagc 913
Query: 253 gtggtgaagctcgtagtgaacatgaagctagccggcgattgaaaactgagctattaatac 312
||||||| |||||||||| ||||||||||| || || || || ||||||||| | || |
Sbjct: 912 gtggtgacactcgtagtgagcatgaagctagtcgacgcttaaagactgagctacttattc 853
Query: 313 agatggatgggttgactaagacagatgagcttgtttttgttctagcagcaacaaatttac 372
|||||||||| || || || || | || || || ||||| || |||||||||||| |||
Sbjct: 852 agatggatggctt-acaaaaacgaacgacctagtatttgtgcttgcagcaacaaatctac 794
Query: 373 catgggagttggatgcagcaatgctgcgtcggctggagaagcgtattcttgt 424
||||||| || |||||||| ||||| |||||||| |||||||| ||||||||
Sbjct: 793 catgggaattagatgcagctatgctccgtcggcttgagaagcggattcttgt 742
Score = 46.1 bits (23), Expect = 0.004
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 676 ttgaacttgctttgaggaatacaagaccgtctgctcatcttcatgcacatagatacgaaa 735
|||||||||||||||| || ||||| ||||| || ||||| || |||||| | || ||||
Sbjct: 490 ttgaacttgctttgagcaacacaaggccgtcagcccatctccaagcacatcgttatgaaa 431
Query: 736 agttcaaccaagattatgg 754
| || ||||| || |||||
Sbjct: 430 aatttaaccaggactatgg 412
>gb|BJ213945.1|BJ213945 BJ213945 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh25b03 5', mRNA sequence
Length = 633
Score = 111 bits (56), Expect = 8e-023
Identities = 119/140 (85%)
Strand = Plus / Plus
Query: 12 ggtctattatcaccttggaaaggcatattactgtttggtccacctggaacaggaaagaca 71
|||||| ||||||| ||||||||||| ||||| |||||||| ||||||||||| ||||||
Sbjct: 479 ggtctactatcaccgtggaaaggcatcttactttttggtcctcctggaacagggaagaca 538
Query: 72 atgctagctaaagctgtggctactgagtgcaaaacaacttttttcaatatttctgcctcg 131
||||| || ||||| || |||||||||||||| || || || ||||| ||||| || ||
Sbjct: 539 atgctggcaaaagcagttgctactgagtgcaatactacattcttcaacatttcagcttca 598
Query: 132 tcgattgtaagcaagtggcg 151
|| ||||| ||||| |||||
Sbjct: 599 tcaattgtcagcaaatggcg 618
>gb|CD873780.1|CD873780 AZO3.100K12F010925 AZO3 Triticum aestivum cDNA clone AZO3100K12,
mRNA sequence
Length = 648
Score = 105 bits (53), Expect = 5e-021
Identities = 98/113 (86%)
Strand = Plus / Plus
Query: 12 ggtctattatcaccttggaaaggcatattactgtttggtccacctggaacaggaaagaca 71
|||||| ||||||| ||||||||||| ||||| |||||||| ||||||||||| ||||||
Sbjct: 470 ggtctactatcaccgtggaaaggcatcttactttttggtcctcctggaacagggaagaca 529
Query: 72 atgctagctaaagctgtggctactgagtgcaaaacaacttttttcaatatttc 124
||||| || ||||| || |||||||||||||| || || || ||||| |||||
Sbjct: 530 atgctggcaaaagcagttgctactgagtgcaatactacattcttcaacatttc 582
>gb|CV781253.1|CV781253 FGAS075664 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 832
Score = 105 bits (53), Expect = 5e-021
Identities = 197/241 (81%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 12 ggtctattatcaccttggaaaggcatattactgtttggtccacctggaacaggaaagaca 71
|||||| ||||||| ||||||||||| ||||| |||||||| ||||||||||| ||||||
Sbjct: 566 ggtctactatcaccgtggaaaggcatcttactttttggtcctcctggaacagggaagaca 625
Query: 72 atgctagctaaagctgtggctactgagtgcaaaacaacttttttcaatatttc-tgcctc 130
||||| || ||||| || |||||||||||||| || || || ||| | ||||| || ||
Sbjct: 626 atgctggcaaaagcagttgctactgagtgcaatactacattcttccacatttcgggcttc 685
Query: 131 gtcgattgtaagcaagtggc-gcggtgactcggagaaactagtgaaagtgttattcgaac 189
|| |||| ||||| |||| | || || || ||||||||||| ||||| | || || |
Sbjct: 686 atcaattggcagcaaatggcggtggagattctgagaaactagtcaaagtcctttttgagc 745
Query: 190 ttgcaaggcatcatgcaccatctactattttccttgatgagattgatgctatcattagtc 249
|||| | |||||||||||||| || ||||| |||||||||| || |||||| |||||||
Sbjct: 746 ttgccaaacatcatgcaccatcaacaatttttcttgatgaga-tggtgctattattagtc 804
Query: 250 a 250
|
Sbjct: 805 a 805
>gb|BQ241633.1|BQ241633 TaE05002G05R TaE05 Triticum aestivum cDNA clone TaE05002G05R, mRNA
sequence
Length = 624
Score = 103 bits (52), Expect = 2e-020
Identities = 82/92 (89%)
Strand = Plus / Plus
Query: 12 ggtctattatcaccttggaaaggcatattactgtttggtccacctggaacaggaaagaca 71
|||||| ||||||| ||||||||||| ||||| |||||||| ||||||||||| ||||||
Sbjct: 476 ggtctactatcaccgtggaaaggcatcttactttttggtcctcctggaacagggaagaca 535
Query: 72 atgctagctaaagctgtggctactgagtgcaa 103
||||| || ||||| || ||||||||||||||
Sbjct: 536 atgctggcaaaagcagttgctactgagtgcaa 567
>gb|CA734209.1|CA734209 wde2f.pk002.f16 wde2f Triticum aestivum cDNA clone wde2f.pk002.f16
5' end, mRNA sequence
Length = 650
Score = 101 bits (51), Expect = 8e-020
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 46 ttggtccacctggaacaggaaagacaatgctagctaaagctgtggctactgagtgcaaaa 105
|||||||||| |||||||||||||||||||| || |||||||||||||| ||||||||||
Sbjct: 565 ttggtccaccaggaacaggaaagacaatgctggcaaaagctgtggctaccgagtgcaaaa 624
Query: 106 caacttt 112
|||||||
Sbjct: 625 caacttt 631
>gb|CA705418.1|CA705418 wdk1c.pk014.m15 wdk1c Triticum aestivum cDNA clone wdk1c.pk014.m15
5' end, mRNA sequence
Length = 203
Score = 87.7 bits (44), Expect = 1e-015
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 681 cttgctttgaggaatacaagaccgtctgctcatcttcatgcacatagatacgaaaagttc 740
||||| |||||||||||| | |||||||||||||| |||||||||||||| || | |||
Sbjct: 1 cttgccttgaggaatacacggccgtctgctcatctccatgcacatagatatgagcaattc 60
Query: 741 aaccaagattatggcagtcatgtc 764
|| |||||||||||||| ||||||
Sbjct: 61 aatcaagattatggcagccatgtc 84
>gb|CV766847.1|CV766847 FGAS061234 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 825
Score = 81.8 bits (41), Expect = 8e-014
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 348 tttgttctagcagcaacaaatttaccatgggagttggatgcagcaatgctgcgtcggctg 407
||||| || |||||||||||| |||||||||| || |||||||| ||||| ||||||||
Sbjct: 151 tttgtgcttgcagcaacaaatctaccatgggaattagatgcagctatgctccgtcggctt 210
Query: 408 gagaagcgtattcttgt 424
|||||||| ||||||||
Sbjct: 211 gagaagcggattcttgt 227
Score = 50.1 bits (25), Expect = 3e-004
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 678 gaacttgctttgaggaatacaagaccgtctgctcatcttcatgcacatagatacgaaaag 737
|||||||||||||| || ||||| ||||| || ||||| || |||||| | || ||||||
Sbjct: 481 gaacttgctttgagcaacacaaggccgtcagcccatctccaagcacatcgttatgaaaag 540
Query: 738 ttcaaccaagattatgg 754
|| ||||| || |||||
Sbjct: 541 tttaaccaggactatgg 557
>gb|CD927540.1|CD927540 GR45.102H04F010316 GR45 Triticum aestivum cDNA clone GR45102H04,
mRNA sequence
Length = 704
Score = 73.8 bits (37), Expect = 2e-011
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 348 tttgttctagcagcaacaaatttaccatgggagttggatgcagcaatgctgcgtcggctg 407
||||| || |||||||||||| |||| ||||| || |||||||| ||||| ||||||||
Sbjct: 44 tttgtgcttgcagcaacaaatctaccctgggaattagatgcagctatgctccgtcggctt 103
Query: 408 gagaagcgtattcttgt 424
|||||||| ||||||||
Sbjct: 104 gagaagcggattcttgt 120
Score = 42.1 bits (21), Expect = 0.065
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 678 gaacttgctttgaggaatacaagaccgtctgctcatcttcatgcacatagatacgaaaag 737
|||||||||||||| || ||||| ||||| || ||||| || |||||| | || |||||
Sbjct: 374 gaacttgctttgagcaacacaaggccgtcagcccatctccaagcacatcgttatgaaaaa 433
Query: 738 ttcaaccaagattatgg 754
|| ||||| || |||||
Sbjct: 434 tttaaccaggactatgg 450
>gb|CK153730.1|CK153730 FGAS032383 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 905
Score = 60.0 bits (30), Expect = 3e-007
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 12 ggtctattatcaccttggaaaggcatattactgtttggtccacctggaacaggaaagaca 71
|||||| ||||||| ||||||||||| ||||| |||| | ||||||||||| ||||||
Sbjct: 543 ggtctactatcaccgtggaaaggcatcttacttcttgggtctcctggaacagggaagaca 602
Query: 72 atgctagctaaagctgtggctactg 96
||||| | ||||| || |||||||
Sbjct: 603 atgctggncaaagcagttgctactg 627
>gb|CA644070.1|CA644070 wre1n.pk0076.g8 wre1n Triticum aestivum cDNA clone wre1n.pk0076.g8
5' end, mRNA sequence
Length = 514
Score = 56.0 bits (28), Expect = 4e-006
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 27 tggaaaggcatattactgtttgg-tccacctggaacaggaaagacaatgctagctaaagc 85
||||||||||| ||||| ||||| ||| ||||||||||| ||||||||||| || |||||
Sbjct: 348 tggaaaggcatcttactttttgggtcctcctggaacagggaagacaatgctggcaaaagc 407
>gb|BE427329.1|BE427329 PSR6253 ITEC PSR Wheat Pericarp/Testa Library Triticum aestivum
cDNA clone PSR6253, mRNA sequence
Length = 640
Score = 54.0 bits (27), Expect = 2e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 30 aaaggcatattactgtttggtccacctggaacaggaaagacaatgctagctaaagctgt 88
||||| ||||| || |||||||||||||| || || ||||| ||||| |||||||||||
Sbjct: 460 aaaggaatattgctttttggtccacctggtacggggaagaccatgcttgctaaagctgt 518
>gb|BJ260717.1|BJ260717 BJ260717 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh26i12 5', mRNA sequence
Length = 636
Score = 54.0 bits (27), Expect = 2e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 30 aaaggcatattactgtttggtccacctggaacaggaaagacaatgctagctaaagctgt 88
||||| ||||| || |||||||||||||| || || ||||| ||||| |||||||||||
Sbjct: 80 aaaggaatattgctttttggtccacctggtacggggaagaccatgcttgctaaagctgt 138
>gb|BJ269215.1|BJ269215 BJ269215 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh20p04 5', mRNA sequence
Length = 696
Score = 54.0 bits (27), Expect = 2e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 30 aaaggcatattactgtttggtccacctggaacaggaaagacaatgctagctaaagctgt 88
||||| ||||| || |||||||||||||| || || ||||| ||||| |||||||||||
Sbjct: 398 aaaggaatattgctttttggtccacctggtacggggaagaccatgcttgctaaagctgt 456
>gb|CD865940.1|CD865940 AZO2.102C16F010112 AZO2 Triticum aestivum cDNA clone AZO2102C16,
mRNA sequence
Length = 692
Score = 54.0 bits (27), Expect = 2e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 30 aaaggcatattactgtttggtccacctggaacaggaaagacaatgctagctaaagctgt 88
||||| ||||| || |||||||||||||| || || ||||| ||||| |||||||||||
Sbjct: 463 aaaggaatattgctttttggtccacctggtacggggaagaccatgcttgctaaagctgt 521
>gb|CK161359.1|CK161359 FGAS013927 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1128
Score = 54.0 bits (27), Expect = 2e-005
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 30 aaaggcatattactgtttggtccacctggaacaggaaagacaatgctagctaaagctgt 88
||||| ||||| || |||||||||||||| || || ||||| ||||| |||||||||||
Sbjct: 216 aaaggaatattgctttttggtccacctggtacggggaagaccatgcttgctaaagctgt 274
>gb|BE405597.1|BE405597 WHE1209_B09_C17ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1209_B09_C17, mRNA
sequence
Length = 466
Score = 52.0 bits (26), Expect = 7e-005
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 30 aaaggcatattactgtttggtccacctggaacaggaaagacaatgctagctaaagctgtg 89
||||| |||||||| |||||||| ||||| || || ||||| ||||| || |||||||||
Sbjct: 90 aaaggaatattactttttggtccgcctggtacggggaagacgatgcttgcgaaagctgtg 149
Query: 90 gc 91
||
Sbjct: 150 gc 151
>gb|BE405611.1|BE405611 WHE1209_D03_G05ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1209_D03_G05, mRNA
sequence
Length = 638
Score = 52.0 bits (26), Expect = 7e-005
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 30 aaaggcatattactgtttggtccacctggaacaggaaagacaatgctagctaaagctgtg 89
||||| |||||||| |||||||| ||||| || || ||||| ||||| || |||||||||
Sbjct: 65 aaaggaatattactttttggtccgcctggtacggggaagacgatgcttgcaaaagctgtg 124
Query: 90 gc 91
||
Sbjct: 125 gc 126
>gb|BQ241727.1|BQ241727 TaE05001E12R TaE05 Triticum aestivum cDNA clone TaE05001E12R, mRNA
sequence
Length = 703
Score = 52.0 bits (26), Expect = 7e-005
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 30 aaaggcatattactgtttggtccacctggaacaggaaagacaatgctagctaaagctgtg 89
||||| |||||||| |||||||| ||||| || || ||||| ||||| || |||||||||
Sbjct: 552 aaaggaatattactttttggtccgcctggtacggggaagacgatgcttgcgaaagctgtg 611
Query: 90 gc 91
||
Sbjct: 612 gc 613
>gb|AJ614974.1|AJ614974 AJ614974 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 10998R, mRNA
sequence
Length = 732
Score = 52.0 bits (26), Expect = 7e-005
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 30 aaaggcatattactgtttggtccacctggaacaggaaagacaatgctagctaaagctgtg 89
||||| |||||||| |||||||| ||||| || || ||||| ||||| || |||||||||
Sbjct: 341 aaaggaatattactttttggtccgcctggtacggggaagacgatgcttgcaaaagctgtg 400
Query: 90 gc 91
||
Sbjct: 401 gc 402
>gb|CV768354.1|CV768354 FGAS062745 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 820
Score = 52.0 bits (26), Expect = 7e-005
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 31 aaggcatattactgtttggtccacctggaacaggaaagacaatgctagctaaagctgt 88
|||| ||||| || |||||||||||||| || || ||||| ||||| |||||||||||
Sbjct: 108 aaggaatattgctttttggtccacctggtacggggaagaccatgcttgctaaagctgt 165
>gb|BJ221424.1|BJ221424 BJ221424 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh25b03 3', mRNA sequence
Length = 577
Score = 50.1 bits (25), Expect = 3e-004
Identities = 64/77 (83%)
Strand = Plus / Minus
Query: 678 gaacttgctttgaggaatacaagaccgtctgctcatcttcatgcacatagatacgaaaag 737
|||||||||||||| || ||||| ||||| || ||||| || |||||| | || ||||||
Sbjct: 394 gaacttgctttgagcaacacaaggccgtcagcccatctccaagcacatcgttatgaaaag 335
Query: 738 ttcaaccaagattatgg 754
|| ||||| || |||||
Sbjct: 334 tttaaccaggactatgg 318
>gb|CA701380.1|CA701380 wkm2c.pk005.p12 wkm2c Triticum aestivum cDNA clone wkm2c.pk005.p12
5' end, mRNA sequence
Length = 554
Score = 50.1 bits (25), Expect = 3e-004
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 678 gaacttgctttgaggaatacaagaccgtctgctcatcttcatgcacatagatacgaaaag 737
|||||||||||||| || ||||| ||||| || ||||| || |||||| | || ||||||
Sbjct: 169 gaacttgctttgagcaacacaaggccgtcagcccatctccaagcacatcgttatgaaaag 228
Query: 738 ttcaaccaagattatgg 754
|| ||||| || |||||
Sbjct: 229 tttaaccaggactatgg 245
>gb|BJ221538.1|BJ221538 BJ221538 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh25k03 3', mRNA sequence
Length = 597
Score = 46.1 bits (23), Expect = 0.004
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 676 ttgaacttgctttgaggaatacaagaccgtctgctcatcttcatgcacatagatacgaaa 735
|||||||||||||||| || ||||| ||||| || ||||| || |||||| | || ||||
Sbjct: 421 ttgaacttgctttgagcaacacaaggccgtcagcccatctccaagcacatcgttatgaaa 362
Query: 736 agttcaaccaagattatgg 754
| || ||||| || |||||
Sbjct: 361 aatttaaccaggactatgg 343
>gb|BJ284457.1|BJ284457 BJ284457 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr3b18 3', mRNA sequence
Length = 508
Score = 46.1 bits (23), Expect = 0.004
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 676 ttgaacttgctttgaggaatacaagaccgtctgctcatcttcatgcacatagatacgaaa 735
|||||||||||||||| || ||||| ||||| || ||||| || |||||| | || ||||
Sbjct: 395 ttgaacttgctttgagcaacacaaggccgtcagcccatctccaagcacatcgttatgaaa 336
Query: 736 agttcaaccaagattatgg 754
| || ||||| || |||||
Sbjct: 335 aatttaaccaggactatgg 317
>gb|BJ306530.1|BJ306530 BJ306530 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd4a09 3', mRNA sequence
Length = 664
Score = 46.1 bits (23), Expect = 0.004
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 676 ttgaacttgctttgaggaatacaagaccgtctgctcatcttcatgcacatagatacgaaa 735
|||||||||||||||| || ||||| ||||| || ||||| || |||||| | || ||||
Sbjct: 398 ttgaacttgctttgagcaacacaaggccgtcagcccatctccaagcacatcgttatgaaa 339
Query: 736 agttcaaccaagattatgg 754
| || ||||| || |||||
Sbjct: 338 aatttaaccaggactatgg 320
>gb|BQ578325.1|BQ578325 WHE0301_F05_K09ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0301_F05_K09, mRNA
sequence
Length = 423
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 36 atattactgtttggtccacctggaacaggaaagacaatgctagctaa 82
||||| ||||| || ||||||||||| || ||||||||||| |||||
Sbjct: 185 atattgctgttcgggccacctggaactggcaagacaatgctcgctaa 231
>gb|BJ269180.1|BJ269180 BJ269180 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh20m05 5', mRNA sequence
Length = 637
Score = 42.1 bits (21), Expect = 0.065
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 678 gaacttgctttgaggaatacaagaccgtctgctcatcttcatgcacatagatacgaaaag 737
|||||||||||||| || ||||| ||||| || ||||| || |||||| | || |||||
Sbjct: 148 gaacttgctttgagcaacacaaggccgtcagcccatctccaagcacatcgttatgaaaaa 207
Query: 738 ttcaaccaagattatgg 754
|| ||||| || |||||
Sbjct: 208 tttaaccaggactatgg 224
>gb|BJ274128.1|BJ274128 BJ274128 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh20m05 3', mRNA sequence
Length = 618
Score = 42.1 bits (21), Expect = 0.065
Identities = 63/77 (81%)
Strand = Plus / Minus
Query: 678 gaacttgctttgaggaatacaagaccgtctgctcatcttcatgcacatagatacgaaaag 737
|||||||||||||| || ||||| ||||| || ||||| || |||||| | || |||||
Sbjct: 464 gaacttgctttgagcaacacaaggccgtcagcccatctccaagcacatcgttatgaaaaa 405
Query: 738 ttcaaccaagattatgg 754
|| ||||| || |||||
Sbjct: 404 tttaaccaggactatgg 388
>gb|CA597297.1|CA597297 wpa1c.pk016.j20 wpa1c Triticum aestivum cDNA clone wpa1c.pk016.j20
5' end, mRNA sequence
Length = 591
Score = 42.1 bits (21), Expect = 0.065
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 678 gaacttgctttgaggaatacaagaccgtctgctcatcttcatgcacatagatacgaaaag 737
|||||||||||||| || ||||| ||||| || ||||| || |||||| | || |||||
Sbjct: 156 gaacttgctttgagcaacacaaggccgtcagcccatctccaagcacatcgttatgaaaaa 215
Query: 738 ttcaaccaagattatgg 754
|| ||||| || |||||
Sbjct: 216 tttaaccaggactatgg 232
>gb|BF292906.1|BF292906 WHE2166_C05_F10ZS Triticum turgidum L. var. durum (durum wheat)
whole plant cDNA library Triticum turgidum cDNA clone
WHE2166_C05_F10, mRNA sequence
Length = 598
Score = 40.1 bits (20), Expect = 0.26
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 46 ttggtccacctggaacaggaaagacaatgctagcta 81
|||| ||||||||||| ||||||||| |||| ||||
Sbjct: 24 ttggcccacctggaacgggaaagacattgcttgcta 59
>gb|CK199160.1|CK199160 FGAS007654 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 832
Score = 40.1 bits (20), Expect = 0.26
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 51 ccacctggaacaggaaagacaatgctagctaa 82
||||||||||| ||||||||| |||| |||||
Sbjct: 704 ccacctggaacgggaaagacattgcttgctaa 735
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 163,873
Number of Sequences: 636343
Number of extensions: 163873
Number of successful extensions: 40302
Number of sequences better than 0.5: 46
Number of HSP's better than 0.5 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40236
Number of HSP's gapped (non-prelim): 63
length of query: 893
length of database: 367,240,239
effective HSP length: 19
effective length of query: 874
effective length of database: 355,149,722
effective search space: 310400857028
effective search space used: 310400857028
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)