BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2751069.2.1
(940 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV767131.1|CV767131 FGAS061518 Triticum aestivum FGAS: L... 509 e-142
gb|BQ578798.1|BQ578798 WHE0309_H06_O11ZS Wheat unstressed s... 305 3e-081
gb|CD905903.1|CD905903 G468.103E19F010808 G468 Triticum aes... 238 6e-061
gb|BJ210849.1|BJ210849 BJ210849 Y. Ogihara unpublished cDNA... 228 5e-058
gb|CV770609.1|CV770609 FGAS065002 Triticum aestivum FGAS: L... 214 8e-054
gb|AL820023.1|AL820023 AL820023 N:130 Triticum aestivum cDN... 212 3e-053
gb|CV772616.1|CV772616 FGAS067011 Triticum aestivum FGAS: L... 212 3e-053
gb|BQ620579.1|BQ620579 TaLr1141F09R TaLr1 Triticum aestivum... 165 7e-039
gb|CN008271.1|CN008271 WHE2639_C09_F17ZE Wheat Fusarium gra... 155 7e-036
gb|BM135681.1|BM135681 WHE2622_G07_M14ZS Wheat Fusarium gra... 86 5e-015
gb|BQ294764.1|BQ294764 WHE2854_B04_D08ZS Wheat unstressed r... 56 5e-006
gb|BQ804896.1|BQ804896 WHE3560_C04_E08ZS Wheat developing g... 56 5e-006
gb|BJ302888.1|BJ302888 BJ302888 Y. Ogihara unpublished cDNA... 52 7e-005
gb|BQ902033.1|BQ902033 Ta02_07d10_R Ta02_AAFC_ECORC_Fusariu... 50 3e-004
gb|BQ902086.1|BQ902086 Ta02_08b12_R Ta02_AAFC_ECORC_Fusariu... 48 0.001
gb|CA737137.1|CA737137 wpi1s.pk009.l12 wpi1s Triticum aesti... 48 0.001
gb|BJ240739.1|BJ240739 BJ240739 Y. Ogihara unpublished cDNA... 40 0.27
gb|CA500473.1|CA500473 WHE4020_B01_D02ZT Wheat meiotic anth... 40 0.27
gb|CA704768.1|CA704768 wdk1c.pk013.p6 wdk1c Triticum aestiv... 40 0.27
>gb|CV767131.1|CV767131 FGAS061518 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 829
Score = 509 bits (257), Expect = e-142
Identities = 506/587 (86%), Gaps = 4/587 (0%)
Strand = Plus / Minus
Query: 57 ctgttttcatatcaagtggtatgacacgaaagccagaggaaatcaatggagcatcatccg 116
|||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||| |
Sbjct: 691 ctgttttcatatcaagtggtataacacgaaagccggatgaaatcaagggagcatcatctg 632
Query: 117 gaaaatgctcatcaattggtgcaaacacaagctggaaggaggaacccacagatttctcat 176
|||||| |||||||||||||||| || |||||||||||||| ||||||||||||||||
Sbjct: 631 gaaaat---catcaattggtgcaaagaccagctggaaggaggatcccacagatttctcat 575
Query: 177 ctattccagtgcaaagctggagaaggtggatgtcccttgaaagaagggcttcatcatgag 236
||||||| ||||||||||| || | || ||| |||||||||||||| |||||||||||
Sbjct: 574 ctattcctgtgcaaagctgaagcatgtcgatatcccttgaaagaagaacttcatcatgac 515
Query: 237 taagaggttgtccttcaaggcggacaacttcaagaatctcctcgttctccactgtgtgag 296
||||||||||||| |||||||| |||||||||||||||||||| ||||| ||||||||||
Sbjct: 514 taagaggttgtccctcaaggcgaacaacttcaagaatctcctcattctctactgtgtgag 455
Query: 297 caagtggcatgatcatctgccccccagaaaatctcatgggtcgcaacccaggaagtgagc 356
||||||||||||| ||||| | ||||||||||||||| || |||| |||||| | ||| |
Sbjct: 454 caagtggcatgatgatctggctcccagaaaatctcattggacgcagcccagggaatgaac 395
Query: 357 acgcactggtcttcaatgatgaagccaaatacgcatcaatattgtaatcagcccattcag 416
| | || || |||| || |||||||||||| ||||| ||| ||||||||||||| || |
Sbjct: 394 atgtgcttgttttcagtgctgaagccaaatatgcatccatactgtaatcagcccactcgg 335
Query: 417 atctatgctccctcagaaatcgtaccagtactgccggtgggacgctctgcagtaacatgg 476
||||||| |||||||||||||| || |||| || |||||||| |||||||||||||| |
Sbjct: 334 atctatgttccctcagaaatcgaactagtatcgcaggtgggacactctgcagtaacattg 275
Query: 477 atgccttcgcacaaataatgcctcctggggctccaaatgtaatcccagcattgctagtat 536
||||||| ||||| ||| | ||||| |||||| | || | | | || ||||||| |
Sbjct: 274 atgccttggcacatatagtacctccaggggcttcgaaagcattaacaccattgctgatgc 215
Query: 537 tcctaattttcttggttgagttgcaagcaacaacaacgtcttcaatgccatctcccccca 596
||||||||||||| ||||||||||||||||| || || ||||||||||||||||| |||
Sbjct: 214 tcctaattttcttagttgagttgcaagcaacgactacatcttcaatgccatctccagcca 155
Query: 597 ttacagaccaaccatcatcattgaaaccactaatggcatcattaaac 643
||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 154 ttatggaccaaccatcatcattgaaaccactgg-ggcatcattaaac 109
>gb|BQ578798.1|BQ578798 WHE0309_H06_O11ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0309_H06_O11, mRNA
sequence
Length = 748
Score = 305 bits (154), Expect = 3e-081
Identities = 311/364 (85%)
Strand = Plus / Minus
Query: 552 ttgagttgcaagcaacaacaacgtcttcaatgccatctccccccattacagaccaaccat 611
||||||||||||||| || || ||||||||||| ||||| ||||||||||||||||||
Sbjct: 438 ttgagttgcaagcaataatcacatcttcaatgccgtctccagccattacagaccaaccat 379
Query: 612 catcattgaaaccactaatggcatcattaaaccccctgcttagtctttgactaaaggtcc 671
|||||||||| ||||| || ||||||||||| || || || || || |||||||| ||||
Sbjct: 378 catcattgaagccacttatagcatcattaaatcctctactcagcctctgactaaatgtcc 319
Query: 672 gtagaactgcaggttgccttcccaaggcatacactacttctccacttgtttcttgagcaa 731
| ||||| ||||||||||| |||| ||||| || || || ||||| |||||||||||||
Sbjct: 318 gcagaacagcaggttgcctccccagagcatatacaacctccccactagtttcttgagcaa 259
Query: 732 tttgtctaaggtggcgcagtgccacagtagtcattttctgagcaactactctagaagact 791
| ||||| | ||| || | |||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 258 tctgtctgatgtgtcgtaatgccgcagtagtcattttctgagcaactaccctagaagact 199
Query: 792 catatagtggtcgaagcacttcaggaacactccatgcctcgagatctagatggtccacta 851
|||| || || ||||||||||| ||||||||||| ||||| || || ||||| |||||||
Sbjct: 198 catagagcgggcgaagcacttctggaacactccaagcctcaaggtccagatgatccacta 139
Query: 852 tatgcacaatcgaacctnnaccttcgcatgggcgcactaaatacccacttggaagcatct 911
|||||||||| ||||| ||| |||||||| || |||||||| ||||| ||||||||||
Sbjct: 138 tatgcacaattgaacccccaccgtcgcatggccgaactaaatagccactaggaagcatct 79
Query: 912 cagc 915
||||
Sbjct: 78 cagc 75
Score = 220 bits (111), Expect = 1e-055
Identities = 213/247 (86%)
Strand = Plus / Minus
Query: 248 ccttcaaggcggacaacttcaagaatctcctcgttctccactgtgtgagcaagtggcatg 307
|||||||| || |||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 739 ccttcaagacgaacaacttctagaatctcctcattctccactgtgtgagcaagtggcatg 680
Query: 308 atcatctgccccccagaaaatctcatgggtcgcaacccaggaagtgagcacgcactggtc 367
|| ||||| | |||||||||||||||||| |||||||||||||||||||| | || |
Sbjct: 679 atgatctggctcccagaaaatctcatgggacgcaacccaggaagtgagcatgagcttgat 620
Query: 368 ttcaatgatgaagccaaatacgcatcaatattgtaatcagcccattcagatctatgctcc 427
|||| | ||||||| |||| ||||||| || ||||||||||||||||| | ||| |||
Sbjct: 619 ttcagcgctgaagccgaatatgcatcaaagttataatcagcccattcagaccgatgttcc 560
Query: 428 ctcagaaatcgtaccagtactgccggtgggacgctctgcagtaacatggatgccttcgca 487
|||||||| || ||||||||||| ||||| || |||||||||||||| ||||| || |||
Sbjct: 559 ctcagaaaccgaaccagtactgctggtggaacactctgcagtaacattgatgctttagca 500
Query: 488 caaataa 494
|| ||||
Sbjct: 499 catataa 493
>gb|CD905903.1|CD905903 G468.103E19F010808 G468 Triticum aestivum cDNA clone G468103E19,
mRNA sequence
Length = 751
Score = 238 bits (120), Expect = 6e-061
Identities = 262/308 (85%), Gaps = 1/308 (0%)
Strand = Plus / Minus
Query: 552 ttgagttgcaagcaacaacaacgtcttcaatgccatctccccccattacagaccaaccat 611
||||||||||||||| || || ||||||||||| ||||| ||||||||||||||||||
Sbjct: 318 ttgagttgcaagcaataatcacatcttcaatgccgtctccagccattacagaccaaccat 259
Query: 612 catcattgaaaccactaatggcatcattaaaccccctgcttagtctttgactaaaggtcc 671
|||||||||| ||||| || ||||||||||| || || || || || |||||||| ||||
Sbjct: 258 catcattgaagccacttatagcatcattaaatcctctactcagcctctgactaaatgtcc 199
Query: 672 gtagaactgcaggttgccttcccaaggcatacactacttctccacttgtttcttgagcaa 731
| ||||| ||||||||||| || | ||||| || || || ||||| |||||||||||||
Sbjct: 198 gcagaacagcaggttgcctccctagagcatatacaacctccccactagtttcttgagcaa 139
Query: 732 tttgtctaaggtggcgcagtgccacagtagtcattttctgagcaactactctagaagact 791
| ||||| | ||| || | |||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 138 tctgtctgatgtgtcgtaatgccgcagtagtcattttctgagcaactaccctagaagact 79
Query: 792 catatagtggtcgaagcacttcaggaacactccatgcct-cgagatctagatggtccact 850
|||| || || ||||||||||| ||||||||||| |||| | || || ||||| ||||||
Sbjct: 78 catagagcgggcgaagcacttctggaacactccaagcctccaaggtccagatgatccact 19
Query: 851 atatgcac 858
||||||||
Sbjct: 18 atatgcac 11
Score = 220 bits (111), Expect = 1e-055
Identities = 213/247 (86%)
Strand = Plus / Minus
Query: 248 ccttcaaggcggacaacttcaagaatctcctcgttctccactgtgtgagcaagtggcatg 307
|||||||| || |||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 619 ccttcaagacgaacaacttctagaatctcctcattctccactgtgtgagcaagtggcatg 560
Query: 308 atcatctgccccccagaaaatctcatgggtcgcaacccaggaagtgagcacgcactggtc 367
|| ||||| | |||||||||||||||||| |||||||||||||||||||| | || |
Sbjct: 559 atgatctggctcccagaaaatctcatgggacgcaacccaggaagtgagcatgagcttgat 500
Query: 368 ttcaatgatgaagccaaatacgcatcaatattgtaatcagcccattcagatctatgctcc 427
|||| | ||||||| |||| ||||||| || ||||||||||||||||| | ||| |||
Sbjct: 499 ttcagcgctgaagccgaatatgcatcaaagttataatcagcccattcagaccgatgttcc 440
Query: 428 ctcagaaatcgtaccagtactgccggtgggacgctctgcagtaacatggatgccttcgca 487
|||||||| || ||||||||||| ||||| || |||||||||||||| ||||| || |||
Sbjct: 439 ctcagaaaccgaaccagtactgctggtggaacactctgcagtaacattgatgctttagca 380
Query: 488 caaataa 494
|| ||||
Sbjct: 379 catataa 373
Score = 69.9 bits (35), Expect = 3e-010
Identities = 81/95 (85%), Gaps = 1/95 (1%)
Strand = Plus / Minus
Query: 123 gctcatcaattggtgcaaacacaagctgg-aaggaggaacccacagatttctcatctatt 181
||||||||||||||||||| ||||| ||| ||| |||| |||| |||||||| |||| |
Sbjct: 739 gctcatcaattggtgcaaagacaagttgggaagcaggatcccattgatttctcgtctagt 680
Query: 182 ccagtgcaaagctggagaaggtggatgtcccttga 216
|||||||||| ||| || |||||||| || |||||
Sbjct: 679 ccagtgcaaaactgaagcaggtggatatctcttga 645
>gb|BJ210849.1|BJ210849 BJ210849 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh36f11 5', mRNA sequence
Length = 223
Score = 228 bits (115), Expect = 5e-058
Identities = 197/224 (87%), Gaps = 4/224 (1%)
Strand = Plus / Minus
Query: 57 ctgttttcatatcaagtggtatgacacgaaagccagaggaaatcaatggagcatcatccg 116
||||||| |||||||||||||| ||||||||||| || |||| | | | ||||||||| |
Sbjct: 223 ctgttttnatatcaagtggtataacacgaaagccggatgaaancnaggnagcatcatctg 164
Query: 117 gaaaatgctcatcaattggtgcaaacacaagctggaaggaggaacccacagatttctcat 176
|||||| |||||||||||||||| || |||||||||||||| ||||||||||| ||||
Sbjct: 163 gaaaat---catcaattggtgcaaagaccagctggaaggaggatcccacagatttntcat 107
Query: 177 ctattccagtgcaaagctggagaaggt-ggatgtcccttgaaagaagggcttcatcatga 235
||||||| ||||||||||| || | || |||| |||||||||||||| |||||||||||
Sbjct: 106 ctattcctgtgcaaagctgaagcatgtcggatatcccttgaaagaagaacttcatcatga 47
Query: 236 gtaagaggttgtccttcaaggcggacaacttcaagaatctcctc 279
||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 46 ctaagaggttgtccctcaaggcgaacaacttcaagaatctcctc 3
>gb|CV770609.1|CV770609 FGAS065002 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 863
Score = 214 bits (108), Expect = 8e-054
Identities = 214/248 (86%), Gaps = 1/248 (0%)
Strand = Plus / Minus
Query: 248 ccttcaagg-cggacaacttcaagaatctcctcgttctccactgtgtgagcaagtggcat 306
||||||||| || |||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 620 ccttcaaggacgaacaacttctagaatctcctcattctccactgtgtgagcaagtggcat 561
Query: 307 gatcatctgccccccagaaaatctcatgggtcgcaacccaggaagtgagcacgcactggt 366
||| ||||| | |||||||||||||||||| |||||||||||||||||||| | || |
Sbjct: 560 gatgatctggctcccagaaaatctcatgggacgcaacccaggaagtgagcatgagcttga 501
Query: 367 cttcaatgatgaagccaaatacgcatcaatattgtaatcagcccattcagatctatgctc 426
|||| | ||||||| |||| ||||||| || ||||||||||||||||| | ||| ||
Sbjct: 500 tttcagcgctgaagccgaatatgcatcaaagttataatcagcccattcagaccgatgttc 441
Query: 427 cctcagaaatcgtaccagtactgccggtgggacgctctgcagtaacatggatgccttcgc 486
||||||||| || ||||||||||| ||||| || |||||||||||||| ||||| || ||
Sbjct: 440 cctcagaaaccgaaccagtactgctggtggaacactctgcagtaacattgatgctttagc 381
Query: 487 acaaataa 494
||| ||||
Sbjct: 380 acatataa 373
Score = 151 bits (76), Expect = 1e-034
Identities = 178/212 (83%)
Strand = Plus / Minus
Query: 552 ttgagttgcaagcaacaacaacgtcttcaatgccatctccccccattacagaccaaccat 611
||||||||||||||| || || ||||||||||| ||||| ||||||||||||||||||
Sbjct: 318 ttgagttgcaagcaataatcacatcttcaatgccgtctccagccattacagaccaaccat 259
Query: 612 catcattgaaaccactaatggcatcattaaaccccctgcttagtctttgactaaaggtcc 671
|||||||||| ||||| || ||||||||||| || || || || || |||||||| ||||
Sbjct: 258 catcattgaagccacttatagcatcattaaatcctctactcagcctctgactaaatgtcc 199
Query: 672 gtagaactgcaggttgccttcccaaggcatacactacttctccacttgtttcttgagcaa 731
| ||||| ||||||||||| |||| ||||| || || || ||||| |||||||||||||
Sbjct: 198 gcagaacagcaggttgcctccccagagcatatacaacctccccactagtttcttgagcaa 139
Query: 732 tttgtctaaggtggcgcagtgccacagtagtc 763
| ||||| | ||| || | |||| ||||||||
Sbjct: 138 tctgtctgatgtgtcgtaatgccgcagtagtc 107
Score = 83.8 bits (42), Expect = 2e-014
Identities = 98/114 (85%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 104 ggagcatcatccggaaaatgctc-atcaattggtgcaaacacaagctggaaggaggaacc 162
||||||||||| |||||| |||| ||||||||||||||| ||||| ||||| |||| ||
Sbjct: 758 ggagcatcatcaggaaaaagctccatcaattggtgcaaagacaagtgggaagcaggatcc 699
Query: 163 cacagatttctcatctattccagtgcaaagctggagaaggtggatgtcccttga 216
|| |||||||| |||||||||||||||| ||| || |||||||| || |||||
Sbjct: 698 cat-gatttctcgtctattccagtgcaaaactgaagcaggtggatatctcttga 646
>gb|AL820023.1|AL820023 AL820023 N:130 Triticum aestivum cDNA clone E11_N130_plate_42, mRNA
sequence
Length = 626
Score = 212 bits (107), Expect = 3e-053
Identities = 212/247 (85%)
Strand = Plus / Minus
Query: 248 ccttcaaggcggacaacttcaagaatctcctcgttctccactgtgtgagcaagtggcatg 307
|||||||| || |||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 466 ccttcaagacgaacaacttctagaatctcctcattctccactgtgtgagcaagtggcatg 407
Query: 308 atcatctgccccccagaaaatctcatgggtcgcaacccaggaagtgagcacgcactggtc 367
|| ||||| | |||||||||||||||||| |||||||||||||||||||| | || |
Sbjct: 406 atgatctggctcccagaaaatctcatgggacgcaacccaggaagtgagcatgagcttgat 347
Query: 368 ttcaatgatgaagccaaatacgcatcaatattgtaatcagcccattcagatctatgctcc 427
|||| | |||||| |||| ||||||| || ||||||||||||||||| | ||| |||
Sbjct: 346 ttcagcgccgaagccgaatatgcatcaaagttataatcagcccattcagaccgatgttcc 287
Query: 428 ctcagaaatcgtaccagtactgccggtgggacgctctgcagtaacatggatgccttcgca 487
|||||||| || ||||||||||| ||||| || |||||||||||||| ||||| || |||
Sbjct: 286 ctcagaaaccgaaccagtactgctggtggaacactctgcagtaacattgatgctttagca 227
Query: 488 caaataa 494
|| ||||
Sbjct: 226 catataa 220
Score = 117 bits (59), Expect = 1e-024
Identities = 119/139 (85%)
Strand = Plus / Minus
Query: 552 ttgagttgcaagcaacaacaacgtcttcaatgccatctccccccattacagaccaaccat 611
||||||||||||||| || || ||||||||||| ||||| ||||||||||||||||||
Sbjct: 165 ttgagttgcaagcaataatcacatcttcaatgccgtctccagccattacagaccaaccat 106
Query: 612 catcattgaaaccactaatggcatcattaaaccccctgcttagtctttgactaaaggtcc 671
|||||||||| ||||| | ||||||||||| || || || || || |||||||| ||||
Sbjct: 105 catcattgaagccacttacagcatcattaaatcctctactcagcctctgactaaatgtcc 46
Query: 672 gtagaactgcaggttgcct 690
| ||||| |||||||||||
Sbjct: 45 gcagaacagcaggttgcct 27
Score = 111 bits (56), Expect = 9e-023
Identities = 101/116 (87%)
Strand = Plus / Minus
Query: 101 aatggagcatcatccggaaaatgctcatcaattggtgcaaacacaagctggaaggaggaa 160
|||||||||||||| || ||| ||||||||||||||||||| ||||| |||||| ||||
Sbjct: 607 aatggagcatcatcagggaaaagctcatcaattggtgcaaagacaagttggaagcaggat 548
Query: 161 cccacagatttctcatctattccagtgcaaagctggagaaggtggatgtcccttga 216
|||| |||||||| |||||||||||||||| ||| || |||||||| || |||||
Sbjct: 547 cccattgatttctcgtctattccagtgcaaaactgaagcaggtggatatctcttga 492
>gb|CV772616.1|CV772616 FGAS067011 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 857
Score = 212 bits (107), Expect = 3e-053
Identities = 212/247 (85%)
Strand = Plus / Minus
Query: 248 ccttcaaggcggacaacttcaagaatctcctcgttctccactgtgtgagcaagtggcatg 307
|||||||| || |||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 450 ccttcaagacgaacaacttctagaatctcctcattctccactgtgtgagcaagtggcatg 391
Query: 308 atcatctgccccccagaaaatctcatgggtcgcaacccaggaagtgagcacgcactggtc 367
|| ||||| | |||||||||||||||||| |||||||||||||||||||| | || |
Sbjct: 390 atgatctggctcccagaaaatctcatgggacgcaacccaggaagtgagcatgagcttgat 331
Query: 368 ttcaatgatgaagccaaatacgcatcaatattgtaatcagcccattcagatctatgctcc 427
|||| | |||||| |||| ||||||| || ||||||||||||||||| | ||| |||
Sbjct: 330 ttcagcgccgaagccgaatatgcatcaaagttataatcagcccattcagaccgatgttcc 271
Query: 428 ctcagaaatcgtaccagtactgccggtgggacgctctgcagtaacatggatgccttcgca 487
|||||||| || ||||||||||| ||||| || |||||||||||||| ||||| || |||
Sbjct: 270 ctcagaaaccgaaccagtactgctggtggaacactctgcagtaacattgatgctttagca 211
Query: 488 caaataa 494
|| ||||
Sbjct: 210 catataa 204
Score = 135 bits (68), Expect = 6e-030
Identities = 137/160 (85%)
Strand = Plus / Minus
Query: 57 ctgttttcatatcaagtggtatgacacgaaagccagaggaaatcaatggagcatcatccg 116
|||||||||| || |||||||| ||||| ||||| || || || |||||||||||||| |
Sbjct: 635 ctgttttcatgtccagtggtataacacggaagcctgaagatattaatggagcatcatcag 576
Query: 117 gaaaatgctcatcaattggtgcaaacacaagctggaaggaggaacccacagatttctcat 176
| ||| ||||||||||||||||||| ||||| |||||| |||| |||| |||||||| |
Sbjct: 575 ggaaaagctcatcaattggtgcaaagacaagttggaagcaggatcccattgatttctcgt 516
Query: 177 ctattccagtgcaaagctggagaaggtggatgtcccttga 216
||||||||||||||| ||| || |||||||| || |||||
Sbjct: 515 ctattccagtgcaaaactgaagcaggtggatatctcttga 476
Score = 50.1 bits (25), Expect = 3e-004
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 552 ttgagttgcaagcaacaacaacgtcttcaatgccatctccccccattacagac 604
||||||||||||||| || || ||||||||||| ||||| |||||||||||
Sbjct: 149 ttgagttgcaagcaataatcacatcttcaatgccgtctccagccattacagac 97
>gb|BQ620579.1|BQ620579 TaLr1141F09R TaLr1 Triticum aestivum cDNA clone TaLr1141F09R, mRNA
sequence
Length = 466
Score = 165 bits (83), Expect = 7e-039
Identities = 173/203 (85%)
Strand = Plus / Minus
Query: 292 gtgagcaagtggcatgatcatctgccccccagaaaatctcatgggtcgcaacccaggaag 351
|||||||||||||||||| ||||| | |||||||||||||||||| ||||||||||||||
Sbjct: 466 gtgagcaagtggcatgatgatctggctcccagaaaatctcatgggacgcaacccaggaag 407
Query: 352 tgagcacgcactggtcttcaatgatgaagccaaatacgcatcaatattgtaatcagccca 411
|||||| | || | |||| | ||||||| |||| ||||||| || |||||||||||
Sbjct: 406 tgagcatgagcttgatttcagcgctgaagccgaatatgcatcaaagttataatcagccca 347
Query: 412 ttcagatctatgctccctcagaaatcgtaccagtactgccggtgggacgctctgcagtaa 471
|||||| | ||| ||||||||||| || ||||||||||| ||||| || |||||||||||
Sbjct: 346 ttcagaccgatgttccctcagaaaccgaaccagtactgctggtggaacactctgcagtaa 287
Query: 472 catggatgccttcgcacaaataa 494
||| ||||| || ||||| ||||
Sbjct: 286 cattgatgctttagcacatataa 264
Score = 131 bits (66), Expect = 1e-028
Identities = 150/178 (84%)
Strand = Plus / Minus
Query: 552 ttgagttgcaagcaacaacaacgtcttcaatgccatctccccccattacagaccaaccat 611
||||||||||||||| || || ||||||||||| ||||| ||||||||||||||||||
Sbjct: 209 ttgagttgcaagcaataatcacatcttcaatgccgtctccagccattacagaccaaccat 150
Query: 612 catcattgaaaccactaatggcatcattaaaccccctgcttagtctttgactaaaggtcc 671
|||||||||| ||||| || ||||||||||| || || || || || |||||||| ||||
Sbjct: 149 catcattgaagccacttatagcatcattaaatcctctactcagcctctgactaaatgtcc 90
Query: 672 gtagaactgcaggttgccttcccaaggcatacactacttctccacttgtttcttgagc 729
| ||||| ||||||||||| || | ||||| || || || ||||| |||||||||||
Sbjct: 89 gcagaacagcaggttgcctccctagagcatatacaacctccccactagtttcttgagc 32
>gb|CN008271.1|CN008271 WHE2639_C09_F17ZE Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2639_C09_F17,
mRNA sequence
Length = 592
Score = 155 bits (78), Expect = 7e-036
Identities = 102/110 (92%)
Strand = Plus / Minus
Query: 248 ccttcaaggcggacaacttcaagaatctcctcgttctccactgtgtgagcaagtggcatg 307
|||||||| || |||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 157 ccttcaagacgaacaacttctagaatctcctcattctccactgtgtgagcaagtggcatg 98
Query: 308 atcatctgccccccagaaaatctcatgggtcgcaacccaggaagtgagca 357
|| ||||| | |||||||||||||||||| ||||||||||||||||||||
Sbjct: 97 atgatctggctcccagaaaatctcatgggacgcaacccaggaagtgagca 48
Score = 135 bits (68), Expect = 6e-030
Identities = 137/160 (85%)
Strand = Plus / Minus
Query: 57 ctgttttcatatcaagtggtatgacacgaaagccagaggaaatcaatggagcatcatccg 116
|||||||||| || |||||||| ||||||||||| || || || |||||||||||||| |
Sbjct: 342 ctgttttcatgtccagtggtataacacgaaagcctgaagatattaatggagcatcatcag 283
Query: 117 gaaaatgctcatcaattggtgcaaacacaagctggaaggaggaacccacagatttctcat 176
| ||| ||||||||||||||||||| ||||| |||||| |||| |||| |||||||| |
Sbjct: 282 ggaaaagctcatcaattggtgcaaagacaagttggaagcaggatcccattgatttctcgt 223
Query: 177 ctattccagtgcaaagctggagaaggtggatgtcccttga 216
||| ||||||||||| ||| || |||||||| || |||||
Sbjct: 222 ctagtccagtgcaaaactgaagcaggtggatatctcttga 183
>gb|BM135681.1|BM135681 WHE2622_G07_M14ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2622_G07_M14,
mRNA sequence
Length = 444
Score = 85.7 bits (43), Expect = 5e-015
Identities = 83/97 (85%)
Strand = Plus / Minus
Query: 819 cactccatgcctcgagatctagatggtccactatatgcacaatcgaacctnnaccttcgc 878
||||||| ||||| || || ||||| ||||||||||||||||| ||||| ||| ||||
Sbjct: 444 cactccaagcctcaaggtccagatgatccactatatgcacaattgaacccccaccgtcgc 385
Query: 879 atgggcgcactaaatacccacttggaagcatctcagc 915
|||| || |||||||| ||||| ||||||||||||||
Sbjct: 384 atggccgaactaaatagccactaggaagcatctcagc 348
>gb|BQ294764.1|BQ294764 WHE2854_B04_D08ZS Wheat unstressed root tip cDNA library Triticum
aestivum cDNA clone WHE2854_B04_D08, mRNA sequence
Length = 589
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 403 atcagcccattcagatctatgctccctcagaaatcgtaccagta 446
||||||||||||||| | |||||||||||||||||||| ||||
Sbjct: 282 atcagcccattcagagcggtgctccctcagaaatcgtactagta 239
>gb|BQ804896.1|BQ804896 WHE3560_C04_E08ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3560_C04_E08, mRNA sequence
Length = 639
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 403 atcagcccattcagatctatgctccctcagaaatcgtaccagta 446
||||||||||||||| | |||||||||||||||||||| ||||
Sbjct: 299 atcagcccattcagagcggtgctccctcagaaatcgtactagta 256
>gb|BJ302888.1|BJ302888 BJ302888 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd17d11 5', mRNA sequence
Length = 560
Score = 52.0 bits (26), Expect = 7e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 57 ctgttttcatatcaagtggtatgacacgaaagcc 90
|||||||||| ||||||||||| |||||||||||
Sbjct: 47 ctgttttcatgtcaagtggtataacacgaaagcc 14
>gb|BQ902033.1|BQ902033 Ta02_07d10_R
Ta02_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta02_07d10, mRNA
sequence
Length = 403
Score = 50.1 bits (25), Expect = 3e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 403 atcagcccattcagatctatgctccctcagaaatcgt 439
||||||||||||||| | ||||||||||||||||||
Sbjct: 367 atcagcccattcagagcggtgctccctcagaaatcgt 403
>gb|BQ902086.1|BQ902086 Ta02_08b12_R
Ta02_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta02_08b12, mRNA
sequence
Length = 403
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 404 tcagcccattcagatctatgctccctcagaaatcgt 439
|||||||||||||| | ||||||||||||||||||
Sbjct: 368 tcagcccattcagagcggtgctccctcagaaatcgt 403
>gb|CA737137.1|CA737137 wpi1s.pk009.l12 wpi1s Triticum aestivum cDNA clone wpi1s.pk009.l12
5' end, mRNA sequence
Length = 622
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 403 atcagcccattcagatctatgctccctcagaaatcg 438
|||||||||||| || | ||||||||||||||||||
Sbjct: 218 atcagcccattccgagcgatgctccctcagaaatcg 253
>gb|BJ240739.1|BJ240739 BJ240739 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe17a02 3', mRNA sequence
Length = 611
Score = 40.1 bits (20), Expect = 0.27
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 22 gaaaaagaaaaggtaatgtt 41
||||||||||||||||||||
Sbjct: 60 gaaaaagaaaaggtaatgtt 41
>gb|CA500473.1|CA500473 WHE4020_B01_D02ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4020_B01_D02, mRNA sequence
Length = 470
Score = 40.1 bits (20), Expect = 0.27
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 gaaaaagaaaaggtaatgtt 41
||||||||||||||||||||
Sbjct: 361 gaaaaagaaaaggtaatgtt 380
>gb|CA704768.1|CA704768 wdk1c.pk013.p6 wdk1c Triticum aestivum cDNA clone wdk1c.pk013.p6 5'
end, mRNA sequence
Length = 491
Score = 40.1 bits (20), Expect = 0.27
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 22 gaaaaagaaaaggtaatgtt 41
||||||||||||||||||||
Sbjct: 129 gaaaaagaaaaggtaatgtt 110
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 198,586
Number of Sequences: 636343
Number of extensions: 198586
Number of successful extensions: 74660
Number of sequences better than 0.5: 19
Number of HSP's better than 0.5 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74601
Number of HSP's gapped (non-prelim): 51
length of query: 940
length of database: 367,240,239
effective HSP length: 20
effective length of query: 920
effective length of database: 354,513,379
effective search space: 326152308680
effective search space used: 326152308680
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)