BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2594211.2.1
(668 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ259680.1|BJ259680 BJ259680 Y. Ogihara unpublished cDNA... 172 2e-041
gb|BJ265396.1|BJ265396 BJ265396 Y. Ogihara unpublished cDNA... 172 2e-041
gb|BJ319686.1|BJ319686 BJ319686 Y. Ogihara unpublished cDNA... 172 2e-041
gb|DR736988.1|DR736988 FGAS082358 Triticum aestivum FGAS: L... 172 2e-041
gb|BE517610.1|BE517610 WHE0628_B01_D02ZA Wheat ABA-treated ... 151 7e-035
gb|CD892359.1|CD892359 G118.120L11F010725 G118 Triticum aes... 149 3e-034
gb|BE419472.1|BE419472 WWS012.E5R000101 ITEC WWS Wheat Scut... 143 2e-032
gb|BJ256682.1|BJ256682 BJ256682 Y. Ogihara unpublished cDNA... 143 2e-032
gb|BJ316647.1|BJ316647 BJ316647 Y. Ogihara unpublished cDNA... 143 2e-032
gb|AL819700.1|AL819700 AL819700 n:129 Triticum aestivum cDN... 143 2e-032
gb|CA728402.1|CA728402 wdi1c.pk002.j9 wdi1c Triticum aestiv... 143 2e-032
gb|CA599284.1|CA599284 wyr1c.pk004.g15 wyr1c Triticum aesti... 135 4e-030
gb|CD892360.1|CD892360 G118.120L11R010926 G118 Triticum aes... 133 2e-029
gb|AJ611080.1|AJ611080 AJ611080 Triticum turgidum subsp. du... 101 6e-020
gb|BE499740.1|BE499740 WHE0975_G03_M05ZS Wheat pre-anthesis... 96 4e-018
gb|BE515834.1|BE515834 WHE0606_C03_E06ZA Wheat ABA-treated ... 96 4e-018
gb|BQ169877.1|BQ169877 WHE0975_G03_M05ZT Wheat pre-anthesis... 96 4e-018
gb|CD863818.1|CD863818 AZO1.108C09F010131 AZO1 Triticum aes... 96 4e-018
gb|CK205372.1|CK205372 FGAS016850 Triticum aestivum FGAS: L... 96 4e-018
gb|CN011610.1|CN011610 WHE3886_C10_F20ZS Wheat Fusarium gra... 96 4e-018
gb|CV782040.1|CV782040 FGAS076453 Triticum aestivum FGAS: L... 96 4e-018
gb|DR739882.1|DR739882 FGAS000149 Triticum aestivum FGAS: L... 96 4e-018
gb|AY910581.1| Triticum aestivum expansin EXPA11 mRNA, comp... 96 4e-018
gb|AY910582.1| Triticum aestivum expansin EXPA12 mRNA, comp... 96 4e-018
gb|AY485121.3| Triticum aestivum expansin EXPA1 mRNA, compl... 96 4e-018
gb|DR737942.1|DR737942 FGAS083159 Triticum aestivum FGAS: L... 94 1e-017
gb|AY910580.1| Triticum aestivum expansin EXPA10 mRNA, comp... 90 2e-016
gb|BJ214280.1|BJ214280 BJ214280 Y. Ogihara unpublished cDNA... 88 9e-016
gb|BJ221768.1|BJ221768 BJ221768 Y. Ogihara unpublished cDNA... 88 9e-016
gb|BJ280310.1|BJ280310 BJ280310 Y. Ogihara unpublished cDNA... 88 9e-016
gb|BJ285296.1|BJ285296 BJ285296 Y. Ogihara unpublished cDNA... 88 9e-016
gb|BJ285550.1|BJ285550 BJ285550 Y. Ogihara unpublished cDNA... 88 9e-016
gb|CD454188.1|CD454188 WHE0990_H02_P04ZT CS wheat pre-anthe... 88 9e-016
gb|CD863819.1|CD863819 AZO1.108C09R010507 AZO1 Triticum aes... 88 9e-016
gb|CD934022.1|CD934022 GR45.122L24R010830 GR45 Triticum aes... 88 9e-016
gb|BF201369.1|BF201369 WHE0990_H02_P04ZS Wheat pre-anthesis... 86 4e-015
gb|BQ839374.1|BQ839374 WHE4165_D06_H11ZS Wheat CS whole pla... 86 4e-015
gb|CA714338.1|CA714338 wdk3c.pk018.l12 wdk3c Triticum aesti... 86 4e-015
gb|CD894504.1|CD894504 G118.126G10F010823 G118 Triticum aes... 86 4e-015
gb|CK210097.1|CK210097 FGAS021888 Triticum aestivum FGAS: L... 86 4e-015
gb|AY589584.1| Triticum aestivum alpha-expansin EXPA2 mRNA,... 84 1e-014
gb|BE427226.1|BE427226 PSR6138 ITEC PSR Wheat Pericarp/Test... 82 6e-014
gb|BJ270401.1|BJ270401 BJ270401 Y. Ogihara unpublished cDNA... 80 2e-013
gb|BJ270964.1|BJ270964 BJ270964 Y. Ogihara unpublished cDNA... 80 2e-013
gb|CD938849.1|CD938849 OV.111D22F010309 OV Triticum aestivu... 80 2e-013
gb|AY692477.1| Triticum aestivum alpha-expansin EXPA3 mRNA,... 80 2e-013
gb|AY543535.1| Triticum aestivum expansin EXPA9 mRNA, compl... 80 2e-013
gb|BQ169431.1|BQ169431 WHE1771_F09_K17ZT Wheat pre-anthesis... 74 1e-011
gb|CD886737.1|CD886737 G118.103C04F010605 G118 Triticum aes... 72 5e-011
gb|AY543529.1| Triticum aestivum expansin EXPA3 mRNA, compl... 72 5e-011
gb|BE427223.1|BE427223 PSR6135 ITEC PSR Wheat Pericarp/Test... 66 3e-009
gb|CD913512.1|CD913512 G550.118B15R010921 G550 Triticum aes... 66 3e-009
gb|BM259064.1|BM259064 TaFg31_C2_SH Wheat Fusarium graminea... 64 1e-008
gb|BJ322194.1|BJ322194 BJ322194 Y. Ogihara unpublished cDNA... 64 1e-008
gb|CD913625.1|CD913625 G550.118I10R010921 G550 Triticum aes... 64 1e-008
gb|BJ275408.1|BJ275408 BJ275408 Y. Ogihara unpublished cDNA... 62 5e-008
gb|BJ262201.1|BJ262201 BJ262201 Y. Ogihara unpublished cDNA... 58 8e-007
gb|BQ744546.1|BQ744546 WHE4116_G12_N24ZS Wheat salt-stresse... 58 8e-007
gb|BQ744275.1|BQ744275 WHE4113_F12_K23ZS Wheat salt-stresse... 50 2e-004
gb|CA643077.1|CA643077 wre1n.pk0070.e4 wre1n Triticum aesti... 50 2e-004
gb|CA652252.1|CA652252 wre1n.pk0101.b1 wre1n Triticum aesti... 50 2e-004
gb|CA676317.1|CA676317 wrsu1.pk0002.f3 wrsu1 Triticum aesti... 50 2e-004
gb|AY589583.1| Triticum aestivum alpha-expansin EXPA1 mRNA,... 50 2e-004
gb|AY543534.1| Triticum aestivum expansin EXPA8 mRNA, compl... 50 2e-004
gb|AL811719.1|AL811719 AL811719 d:15 Triticum aestivum cDNA... 48 8e-004
>gb|BJ259680.1|BJ259680 BJ259680 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh21m18 5', mRNA sequence
Length = 641
Score = 172 bits (87), Expect = 2e-041
Identities = 138/155 (89%)
Strand = Plus / Minus
Query: 493 tcagttgaactgggccccgctgaaggtctggccgaagccccagccgcgcggggcagcgtt 552
||||| ||||||||| ||||||||||||||||||||| ||||||||||||| | |||||
Sbjct: 213 tcagtggaactgggcgccgctgaaggtctggccgaaggaccagccgcgcgggacggcgtt 154
Query: 553 gctggagaccacggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtc 612
| ||||||||||||| |||||| || || |||||||||||||||||| ||||||||||
Sbjct: 153 gttggagaccacggactggccgttgccggccgtgacgcggaaggagaggccctgcccgtc 94
Query: 613 caggagcgtgttgctctgccagttctggccccagt 647
||||||| |||||||||||||||||| |||||||
Sbjct: 93 gaggagcgcgttgctctgccagttctgcccccagt 59
>gb|BJ265396.1|BJ265396 BJ265396 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh21m18 3', mRNA sequence
Length = 608
Score = 172 bits (87), Expect = 2e-041
Identities = 138/155 (89%)
Strand = Plus / Plus
Query: 493 tcagttgaactgggccccgctgaaggtctggccgaagccccagccgcgcggggcagcgtt 552
||||| ||||||||| ||||||||||||||||||||| ||||||||||||| | |||||
Sbjct: 442 tcagtggaactgggcgccgctgaaggtctggccgaaggaccagccgcgcgggacggcgtt 501
Query: 553 gctggagaccacggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtc 612
| ||||||||||||| |||||| || || |||||||||||||||||| ||||||||||
Sbjct: 502 gttggagaccacggactggccgttgccggccgtgacgcggaaggagaggccctgcccgtc 561
Query: 613 caggagcgtgttgctctgccagttctggccccagt 647
||||||| |||||||||||||||||| |||||||
Sbjct: 562 gaggagcgcgttgctctgccagttctgcccccagt 596
>gb|BJ319686.1|BJ319686 BJ319686 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf9l11 3', mRNA sequence
Length = 729
Score = 172 bits (87), Expect = 2e-041
Identities = 138/155 (89%)
Strand = Plus / Plus
Query: 493 tcagttgaactgggccccgctgaaggtctggccgaagccccagccgcgcggggcagcgtt 552
||||| ||||||||| ||||||||||||||||||||| ||||||||||||| | |||||
Sbjct: 450 tcagtggaactgggcgccgctgaaggtctggccgaaggaccagccgcgcgggacggcgtt 509
Query: 553 gctggagaccacggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtc 612
| ||||||||||||| |||||| || || |||||||||||||||||| ||||||||||
Sbjct: 510 gttggagaccacggactggccgttgccggccgtgacgcggaaggagaggccctgcccgtc 569
Query: 613 caggagcgtgttgctctgccagttctggccccagt 647
||||||| |||||||||||||||||| |||||||
Sbjct: 570 gaggagcgcgttgctctgccagttctgcccccagt 604
>gb|DR736988.1|DR736988 FGAS082358 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1135
Score = 172 bits (87), Expect = 2e-041
Identities = 138/155 (89%)
Strand = Plus / Plus
Query: 493 tcagttgaactgggccccgctgaaggtctggccgaagccccagccgcgcggggcagcgtt 552
||||| ||||||||| ||||||||||||||||||||| ||||||||||||| | |||||
Sbjct: 524 tcagtggaactgggcgccgctgaaggtctggccgaaggaccagccgcgcgggacggcgtt 583
Query: 553 gctggagaccacggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtc 612
| ||||||||||||| |||||| || || |||||||||||||||||| ||||||||||
Sbjct: 584 gttggagaccacggactggccgttgccggccgtgacgcggaaggagaggccctgcccgtc 643
Query: 613 caggagcgtgttgctctgccagttctggccccagt 647
||||||| |||||||||||||||||| |||||||
Sbjct: 644 gaggagcgcgttgctctgccagttctgcccccagt 678
>gb|BE517610.1|BE517610 WHE0628_B01_D02ZA Wheat ABA-treated embryo cDNA library Triticum
aestivum cDNA clone WHE0628_B01_D02, mRNA sequence
Length = 638
Score = 151 bits (76), Expect = 7e-035
Identities = 139/160 (86%)
Strand = Plus / Plus
Query: 488 ggtgttcagttgaactgggccccgctgaaggtctggccgaagccccagccgcgcggggca 547
|||| ||||| ||||||||| ||||||||||||||||||||| ||||||||||||| |
Sbjct: 462 ggtgctcagtggaactgggcgccgctgaaggtctggccgaaggaccagccgcgcgggacg 521
Query: 548 gcgttgctggagaccacggagcggccgtcgctggtggtgacgcggaaggagagggcctgc 607
|||||| |||||| |||||| |||||| || || || ||||||||||||||| |||||
Sbjct: 522 gcgttgttggagatcacggactggccgttgccggccgtcacgcggaaggagaggccctgc 581
Query: 608 ccgtccaggagcgtgttgctctgccagttctggccccagt 647
||||| || |||| |||||||||||||||||| |||||||
Sbjct: 582 ccgtcgagcagcgcgttgctctgccagttctgcccccagt 621
>gb|CD892359.1|CD892359 G118.120L11F010725 G118 Triticum aestivum cDNA clone G118120L11,
mRNA sequence
Length = 501
Score = 149 bits (75), Expect = 3e-034
Identities = 135/155 (87%)
Strand = Plus / Minus
Query: 493 tcagttgaactgggccccgctgaaggtctggccgaagccccagccgcgcggggcagcgtt 552
||||| ||||||||| ||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 328 tcagtggaactgggcgccgctgaaggtctggccgaaggaccagccgcgcggcacggcgtt 269
Query: 553 gctggagaccacggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtc 612
| ||||||| ||||| |||||| || || |||||||||||||||||| ||||||||||
Sbjct: 268 gttggagacgacggactggccgttgccggccgtgacgcggaaggagaggccctgcccgtc 209
Query: 613 caggagcgtgttgctctgccagttctggccccagt 647
|| |||| |||||||||||||||||| |||||||
Sbjct: 208 gagcagcgcgttgctctgccagttctgcccccagt 174
>gb|BE419472.1|BE419472 WWS012.E5R000101 ITEC WWS Wheat Scutellum Library Triticum aestivum
cDNA clone WWS012.E5, mRNA sequence
Length = 479
Score = 143 bits (72), Expect = 2e-032
Identities = 129/148 (87%)
Strand = Plus / Minus
Query: 500 aactgggccccgctgaaggtctggccgaagccccagccgcgcggggcagcgttgctggag 559
|||||||| ||||||||||||||||||||| |||||||||||| | |||||| |||||
Sbjct: 236 aactgggcgccgctgaaggtctggccgaaggaccagccgcgcggcacggcgttgttggag 177
Query: 560 accacggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagc 619
|| ||||| |||||| || || |||||||||||||||||| |||||||||| || |||
Sbjct: 176 acgacggactggccgttgccggccgtgacgcggaaggagaggccctgcccgtcgagcagc 117
Query: 620 gtgttgctctgccagttctggccccagt 647
| |||||||||||||||||| |||||||
Sbjct: 116 gcgttgctctgccagttctgcccccagt 89
>gb|BJ256682.1|BJ256682 BJ256682 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh17k05 5', mRNA sequence
Length = 590
Score = 143 bits (72), Expect = 2e-032
Identities = 129/148 (87%)
Strand = Plus / Minus
Query: 500 aactgggccccgctgaaggtctggccgaagccccagccgcgcggggcagcgttgctggag 559
|||||||| ||||||||||||||||||||| |||||||||||| | |||||| |||||
Sbjct: 241 aactgggcgccgctgaaggtctggccgaaggaccagccgcgcggcacggcgttgttggag 182
Query: 560 accacggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagc 619
|| ||||| |||||| || || |||||||||||||||||| |||||||||| || |||
Sbjct: 181 acgacggactggccgttgccggccgtgacgcggaaggagaggccctgcccgtcgagcagc 122
Query: 620 gtgttgctctgccagttctggccccagt 647
| |||||||||||||||||| |||||||
Sbjct: 121 gcgttgctctgccagttctgcccccagt 94
>gb|BJ316647.1|BJ316647 BJ316647 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf24b19 5', mRNA sequence
Length = 400
Score = 143 bits (72), Expect = 2e-032
Identities = 129/148 (87%)
Strand = Plus / Minus
Query: 500 aactgggccccgctgaaggtctggccgaagccccagccgcgcggggcagcgttgctggag 559
|||||||| ||||||||||||||||||||| |||||||||||| | |||||| |||||
Sbjct: 243 aactgggcgccgctgaaggtctggccgaaggaccagccgcgcggcacggcgttgttggag 184
Query: 560 accacggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagc 619
|| ||||| |||||| || || |||||||||||||||||| |||||||||| || |||
Sbjct: 183 acgacggactggccgttgccggccgtgacgcggaaggagaggccctgcccgtcgagcagc 124
Query: 620 gtgttgctctgccagttctggccccagt 647
| |||||||||||||||||| |||||||
Sbjct: 123 gcgttgctctgccagttctgcccccagt 96
>gb|AL819700.1|AL819700 AL819700 n:129 Triticum aestivum cDNA clone F07_n129_plate_3, mRNA
sequence
Length = 611
Score = 143 bits (72), Expect = 2e-032
Identities = 138/160 (86%)
Strand = Plus / Minus
Query: 488 ggtgttcagttgaactgggccccgctgaaggtctggccgaagccccagccgcgcggggca 547
|||| ||||| ||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 576 ggtgctcagtggaactgggcgccgctgaaggtctggccgaaggaccagccgcgcgggaag 517
Query: 548 gcgttgctggagaccacggagcggccgtcgctggtggtgacgcggaaggagagggcctgc 607
|||||| |||||| |||||| |||||| || || || ||||||||||||||| |||||
Sbjct: 516 gcgttgttggagatcacggactggccgtagccggccgtcacgcggaaggagaggccctgc 457
Query: 608 ccgtccaggagcgtgttgctctgccagttctggccccagt 647
||||| || |||| |||||||||||||||||| |||||||
Sbjct: 456 ccgtcgagcagcgcgttgctctgccagttctgcccccagt 417
>gb|CA728402.1|CA728402 wdi1c.pk002.j9 wdi1c Triticum aestivum cDNA clone wdi1c.pk002.j9 5'
end, mRNA sequence
Length = 549
Score = 143 bits (72), Expect = 2e-032
Identities = 129/148 (87%)
Strand = Plus / Minus
Query: 500 aactgggccccgctgaaggtctggccgaagccccagccgcgcggggcagcgttgctggag 559
|||||||| ||||||||||||||||||||| |||||||||||| | |||||| |||||
Sbjct: 293 aactgggcgccgctgaaggtctggccgaaggaccagccgcgcggcacggcgttgttggag 234
Query: 560 accacggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagc 619
|| ||||| |||||| || || |||||||||||||||||| |||||||||| || |||
Sbjct: 233 acgacggactggccgttgccggccgtgacgcggaaggagaggccctgcccgtcgagcagc 174
Query: 620 gtgttgctctgccagttctggccccagt 647
| |||||||||||||||||| |||||||
Sbjct: 173 gcgttgctctgccagttctgcccccagt 146
>gb|CA599284.1|CA599284 wyr1c.pk004.g15 wyr1c Triticum aestivum cDNA clone wyr1c.pk004.g15
5' end, mRNA sequence
Length = 524
Score = 135 bits (68), Expect = 4e-030
Identities = 113/128 (88%)
Strand = Plus / Minus
Query: 493 tcagttgaactgggccccgctgaaggtctggccgaagccccagccgcgcggggcagcgtt 552
||||| ||||||||| ||||||||||||||||||||| ||||||||||||| | |||||
Sbjct: 129 tcagtggaactgggcgccgctgaaggtctggccgaaggaccagccgcgcgggacggcgtt 70
Query: 553 gctggagaccacggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtc 612
| ||||||||||||| |||||| || || |||||||||||||||||| ||||||||||
Sbjct: 69 gttggagaccacggactggccgttgccggccgtgacgcggaaggagaggccctgcccgtc 10
Query: 613 caggagcg 620
|||||||
Sbjct: 9 gaggagcg 2
>gb|CD892360.1|CD892360 G118.120L11R010926 G118 Triticum aestivum cDNA clone G118120L11,
mRNA sequence
Length = 697
Score = 133 bits (67), Expect = 2e-029
Identities = 133/155 (85%)
Strand = Plus / Plus
Query: 493 tcagttgaactgggccccgctgaaggtctggccgaagccccagccgcgcggggcagcgtt 552
||||| ||||||||| ||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 460 tcagtggaactgggcgccgctgaaggtctggccgaaggaccagccgcgcggcacggcgtt 519
Query: 553 gctggagaccacggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtc 612
| ||||||| ||||| || ||| || || |||||||||||||||||| ||||||||||
Sbjct: 520 gttggagacgacggactggacgttgccggccgtgacgcggaaggagaggccctgcccgtc 579
Query: 613 caggagcgtgttgctctgccagttctggccccagt 647
|| || | |||||||||||||||||| |||||||
Sbjct: 580 gagcagagcgttgctctgccagttctgcccccagt 614
>gb|AJ611080.1|AJ611080 AJ611080 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 04276R, mRNA
sequence
Length = 452
Score = 101 bits (51), Expect = 6e-020
Identities = 99/115 (86%)
Strand = Plus / Minus
Query: 533 cagccgcgcggggcagcgttgctggagaccacggagcggccgtcgctggtggtgacgcgg 592
||||||||||| | |||||| ||||||| ||||| |||||| || || |||||||||
Sbjct: 451 cagccgcgcggcacggcgttgttggagacgacggactggccgttgccggccgtgacgcgg 392
Query: 593 aaggagagggcctgcccgtccaggagcgtgttgctctgccagttctggccccagt 647
||||||||| |||||||||| || |||| |||||||||||||||||| |||||||
Sbjct: 391 aaggagaggccctgcccgtcgagcagcgcgttgctctgccagttctgcccccagt 337
>gb|BE499740.1|BE499740 WHE0975_G03_M05ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0975_G03_M05, mRNA sequence
Length = 464
Score = 95.6 bits (48), Expect = 4e-018
Identities = 91/104 (87%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 563 acggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtg 622
|||| |||||||||||||| |||||| |||||||||||| ||| |||||||||| |||
Sbjct: 295 acggtgcggccgtcgctggaggtgacccggaaggagaggcactggccgtccaggaaggtg 236
Query: 623 ttgctctgccagttctggccccag-tgcgcgacagggcctgcca 665
||||||||||||||| ||||||| |||| |||| |||||||||
Sbjct: 235 ttgctctgccagttcatgccccagttgcgggacatggcctgcca 192
>gb|BE515834.1|BE515834 WHE0606_C03_E06ZA Wheat ABA-treated embryo cDNA library Triticum
aestivum cDNA clone WHE0606_C03_E06, mRNA sequence
Length = 292
Score = 95.6 bits (48), Expect = 4e-018
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 584 gtgacgcggaaggagagggcctgcccgtccaggagcgtgttgctctgccagttctggccc 643
|||||||||||||||||| |||||||||| ||||||| |||||||||||||||||| |||
Sbjct: 170 gtgacgcggaaggagaggccctgcccgtcgaggagcgcgttgctctgccagttctgcccc 229
Query: 644 cagt 647
||||
Sbjct: 230 cagt 233
>gb|BQ169877.1|BQ169877 WHE0975_G03_M05ZT Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0975_G03_M05, mRNA sequence
Length = 634
Score = 95.6 bits (48), Expect = 4e-018
Identities = 91/104 (87%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 563 acggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtg 622
|||| |||||||||||||| |||||| |||||||||||| ||| |||||||||| |||
Sbjct: 524 acggtgcggccgtcgctggaggtgacccggaaggagaggcactggccgtccaggaaggtg 583
Query: 623 ttgctctgccagttctggccccag-tgcgcgacagggcctgcca 665
||||||||||||||| ||||||| |||| |||| |||||||||
Sbjct: 584 ttgctctgccagttcatgccccagttgcgggacatggcctgcca 627
>gb|CD863818.1|CD863818 AZO1.108C09F010131 AZO1 Triticum aestivum cDNA clone AZO1108C09,
mRNA sequence
Length = 693
Score = 95.6 bits (48), Expect = 4e-018
Identities = 91/104 (87%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 563 acggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtg 622
|||| |||||||||||||| |||||| |||||||||||| ||| |||||||||| |||
Sbjct: 204 acggtgcggccgtcgctggaggtgacccggaaggagaggcactggccgtccaggaaggtg 145
Query: 623 ttgctctgccagttctggccccag-tgcgcgacagggcctgcca 665
||||||||||||||| ||||||| |||| |||| |||||||||
Sbjct: 144 ttgctctgccagttcatgccccagttgcgggacatggcctgcca 101
>gb|CK205372.1|CK205372 FGAS016850 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1042
Score = 95.6 bits (48), Expect = 4e-018
Identities = 91/104 (87%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 563 acggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtg 622
|||| |||||||||||||| |||||| |||||||||||| ||| |||||||||| |||
Sbjct: 545 acggtgcggccgtcgctggaggtgacccggaaggagaggcactggccgtccaggaaggtg 604
Query: 623 ttgctctgccagttctggccccag-tgcgcgacagggcctgcca 665
||||||||||||||| ||||||| |||| |||| |||||||||
Sbjct: 605 ttgctctgccagttcatgccccagttgcgggacatggcctgcca 648
>gb|CN011610.1|CN011610 WHE3886_C10_F20ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3886_C10_F20,
mRNA sequence
Length = 568
Score = 95.6 bits (48), Expect = 4e-018
Identities = 91/104 (87%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 563 acggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtg 622
|||| |||||||||||||| |||||| |||||||||||| ||| |||||||||| |||
Sbjct: 508 acggtgcggccgtcgctggaggtgacccggaaggagaggcactggccgtccaggaaggtg 449
Query: 623 ttgctctgccagttctggccccag-tgcgcgacagggcctgcca 665
||||||||||||||| ||||||| |||| |||| |||||||||
Sbjct: 448 ttgctctgccagttcatgccccagttgcgggacatggcctgcca 405
>gb|CV782040.1|CV782040 FGAS076453 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 833
Score = 95.6 bits (48), Expect = 4e-018
Identities = 91/104 (87%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 563 acggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtg 622
|||| |||||||||||||| |||||| |||||||||||| ||| |||||||||| |||
Sbjct: 316 acggtgcggccgtcgctggaggtgacccggaaggagaggcactggccgtccaggaaggtg 257
Query: 623 ttgctctgccagttctggccccag-tgcgcgacagggcctgcca 665
||||||||||||||| ||||||| |||| |||| |||||||||
Sbjct: 256 ttgctctgccagttcatgccccagttgcgggacatggcctgcca 213
>gb|DR739882.1|DR739882 FGAS000149 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1124
Score = 95.6 bits (48), Expect = 4e-018
Identities = 130/156 (83%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 514 gaaggtctggccgaagccccagccgcgcggggcagcgttgctggagaccacggagcggcc 573
|||||||||||||||| |||||||| ||||| |||||| || | |||| ||||||
Sbjct: 839 gaaggtctggccgaagacccagccggcgggggcggcgttgttgctggtgacggtgcggcc 780
Query: 574 gtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtgttgctctgcca 633
||||||| |||||| |||||||||||| ||| ||||| ||| || ||||||||||||
Sbjct: 779 gtcgctgagggtgacccggaaggagaggctctggccgtcgaggtccgcgttgctctgcca 720
Query: 634 gttctggccccag-tgcgcgacagggcctgccaccc 668
||||||||||||| |||| | || ||||||||||||
Sbjct: 719 gttctggccccagttgcgggccatggcctgccaccc 684
>gb|AY910581.1| Triticum aestivum expansin EXPA11 mRNA, complete cds
Length = 1246
Score = 95.6 bits (48), Expect = 4e-018
Identities = 91/104 (87%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 563 acggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtg 622
|||| |||||||||||||| |||||| |||||||||||| ||| |||||||||| |||
Sbjct: 739 acggtgcggccgtcgctggaggtgacccggaaggagaggcactggccgtccaggaaggtg 680
Query: 623 ttgctctgccagttctggccccag-tgcgcgacagggcctgcca 665
||||||||||||||| ||||||| |||| |||| |||||||||
Sbjct: 679 ttgctctgccagttcatgccccagttgcgggacatggcctgcca 636
>gb|AY910582.1| Triticum aestivum expansin EXPA12 mRNA, complete cds
Length = 1201
Score = 95.6 bits (48), Expect = 4e-018
Identities = 91/104 (87%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 563 acggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtg 622
|||| |||||||||||||| |||||| |||||||||||| ||| |||||||||| |||
Sbjct: 740 acggtgcggccgtcgctggaggtgacccggaaggagaggcactggccgtccaggaaggtg 681
Query: 623 ttgctctgccagttctggccccag-tgcgcgacagggcctgcca 665
||||||||||||||| ||||||| |||| |||| |||||||||
Sbjct: 680 ttgctctgccagttcatgccccagttgcgggacatggcctgcca 637
>gb|AY485121.3| Triticum aestivum expansin EXPA1 mRNA, complete cds
Length = 1265
Score = 95.6 bits (48), Expect = 4e-018
Identities = 91/104 (87%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 563 acggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtg 622
|||| |||||||||||||| |||||| |||||||||||| ||| |||||||||| |||
Sbjct: 739 acggtgcggccgtcgctggaggtgacccggaaggagaggcactggccgtccaggaaggtg 680
Query: 623 ttgctctgccagttctggccccag-tgcgcgacagggcctgcca 665
||||||||||||||| ||||||| |||| |||| |||||||||
Sbjct: 679 ttgctctgccagttcatgccccagttgcgggacatggcctgcca 636
>gb|DR737942.1|DR737942 FGAS083159 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1109
Score = 93.7 bits (47), Expect = 1e-017
Identities = 93/107 (86%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 563 acggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtg 622
|||| ||||||||||||| |||||| |||||||||||| ||||||||| ||| || |
Sbjct: 796 acggtgcggccgtcgctgagggtgacccggaaggagaggctctgcccgtcgaggtccgcg 737
Query: 623 ttgctctgccagttctggccccag-tgcgcgacagggcctgccaccc 668
|||||||||||||||||||||||| |||| | || ||||||||||||
Sbjct: 736 ttgctctgccagttctggccccagttgcgggccatggcctgccaccc 690
>gb|AY910580.1| Triticum aestivum expansin EXPA10 mRNA, complete cds
Length = 1226
Score = 89.7 bits (45), Expect = 2e-016
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 563 acggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtg 622
|||| |||||||||||||| |||||| |||||||||||| ||| |||||||||| |||
Sbjct: 740 acggtgcggccgtcgctggaggtgacccggaaggagaggcactggccgtccaggaaggtg 681
Query: 623 ttgctctgccagttctggccccagt 647
||||||||||||||| ||||||||
Sbjct: 680 ttgctctgccagttcatgccccagt 656
>gb|BJ214280.1|BJ214280 BJ214280 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh26k17 5', mRNA sequence
Length = 599
Score = 87.7 bits (44), Expect = 9e-016
Identities = 129/156 (82%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 514 gaaggtctggccgaagccccagccgcgcggggcagcgttgctggagaccacggagcggcc 573
|||||||||||||||| ||||||| ||||| |||||| || | |||| ||||||
Sbjct: 263 gaaggtctggccgaaggaccagccggcgggggcggcgttgttgctggtgacggtgcggcc 204
Query: 574 gtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtgttgctctgcca 633
||||||| |||||| |||||||||||| ||| ||||| ||| || ||||||||||||
Sbjct: 203 gtcgctgagggtgacccggaaggagaggctctggccgtcgaggtccgcgttgctctgcca 144
Query: 634 gttctggccccag-tgcgcgacagggcctgccaccc 668
||||||||||||| |||| | || ||||||||||||
Sbjct: 143 gttctggccccagttgcgggccatggcctgccaccc 108
>gb|BJ221768.1|BJ221768 BJ221768 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh26k17 3', mRNA sequence
Length = 611
Score = 87.7 bits (44), Expect = 9e-016
Identities = 129/156 (82%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 514 gaaggtctggccgaagccccagccgcgcggggcagcgttgctggagaccacggagcggcc 573
|||||||||||||||| ||||||| ||||| |||||| || | |||| ||||||
Sbjct: 349 gaaggtctggccgaaggaccagccggcgggggcggcgttgttgctggtgacggtgcggcc 408
Query: 574 gtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtgttgctctgcca 633
||||||| |||||| |||||||||||| ||| ||||| ||| || ||||||||||||
Sbjct: 409 gtcgctgagggtgacccggaaggagaggctctggccgtcgaggtccgcgttgctctgcca 468
Query: 634 gttctggccccag-tgcgcgacagggcctgccaccc 668
||||||||||||| |||| | || ||||||||||||
Sbjct: 469 gttctggccccagttgcgggccatggcctgccaccc 504
>gb|BJ280310.1|BJ280310 BJ280310 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr7i04 5', mRNA sequence
Length = 516
Score = 87.7 bits (44), Expect = 9e-016
Identities = 129/156 (82%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 514 gaaggtctggccgaagccccagccgcgcggggcagcgttgctggagaccacggagcggcc 573
|||||||||||||||| ||||||| ||||| |||||| || | |||| ||||||
Sbjct: 348 gaaggtctggccgaaggaccagccggcgggggcggcgttgttgctggtgacggtgcggcc 289
Query: 574 gtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtgttgctctgcca 633
||||||| |||||| |||||||||||| ||| ||||| ||| || ||||||||||||
Sbjct: 288 gtcgctgagggtgacccggaaggagaggctctggccgtcgaggtccgcgttgctctgcca 229
Query: 634 gttctggccccag-tgcgcgacagggcctgccaccc 668
||||||||||||| |||| | || ||||||||||||
Sbjct: 228 gttctggccccagttgcgggccatggcctgccaccc 193
>gb|BJ285296.1|BJ285296 BJ285296 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr7i04 3', mRNA sequence
Length = 658
Score = 87.7 bits (44), Expect = 9e-016
Identities = 129/156 (82%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 514 gaaggtctggccgaagccccagccgcgcggggcagcgttgctggagaccacggagcggcc 573
|||||||||||||||| ||||||| ||||| |||||| || | |||| ||||||
Sbjct: 397 gaaggtctggccgaaggaccagccggcgggggcggcgttgttgctggtgacggtgcggcc 456
Query: 574 gtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtgttgctctgcca 633
||||||| |||||| |||||||||||| ||| ||||| ||| || ||||||||||||
Sbjct: 457 gtcgctgagggtgacccggaaggagaggctctggccgtcgaggtccgcgttgctctgcca 516
Query: 634 gttctggccccag-tgcgcgacagggcctgccaccc 668
||||||||||||| |||| | || ||||||||||||
Sbjct: 517 gttctggccccagttgcgggccatggcctgccaccc 552
>gb|BJ285550.1|BJ285550 BJ285550 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr8m22 3', mRNA sequence
Length = 650
Score = 87.7 bits (44), Expect = 9e-016
Identities = 129/156 (82%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 514 gaaggtctggccgaagccccagccgcgcggggcagcgttgctggagaccacggagcggcc 573
|||||||||||||||| ||||||| ||||| |||||| || | |||| ||||||
Sbjct: 356 gaaggtctggccgaaggaccagccggcgggggcggcgttgttgctggtgacggtgcggcc 415
Query: 574 gtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtgttgctctgcca 633
||||||| |||||| |||||||||||| ||| ||||| ||| || ||||||||||||
Sbjct: 416 gtcgctgagggtgacccggaaggagaggctctggccgtcgaggtccgcgttgctctgcca 475
Query: 634 gttctggccccag-tgcgcgacagggcctgccaccc 668
||||||||||||| |||| | || ||||||||||||
Sbjct: 476 gttctggccccagttgcgggccatggcctgccaccc 511
>gb|CD454188.1|CD454188 WHE0990_H02_P04ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0990_H02_P04, mRNA sequence
Length = 738
Score = 87.7 bits (44), Expect = 9e-016
Identities = 129/156 (82%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 514 gaaggtctggccgaagccccagccgcgcggggcagcgttgctggagaccacggagcggcc 573
|||||||||||||||| ||||||| ||||| |||||| || | |||| ||||||
Sbjct: 448 gaaggtctggccgaaggaccagccggcgggggcggcgttgttgctggtgacggtgcggcc 507
Query: 574 gtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtgttgctctgcca 633
||||||| |||||| |||||||||||| ||| ||||| ||| || ||||||||||||
Sbjct: 508 gtcgctgagggtgacccggaaggagaggctctggccgtcgaggtccgcgttgctctgcca 567
Query: 634 gttctggccccag-tgcgcgacagggcctgccaccc 668
||||||||||||| |||| | || ||||||||||||
Sbjct: 568 gttctggccccagttgcgggccatggcctgccaccc 603
>gb|CD863819.1|CD863819 AZO1.108C09R010507 AZO1 Triticum aestivum cDNA clone AZO1108C09,
mRNA sequence
Length = 671
Score = 87.7 bits (44), Expect = 9e-016
Identities = 90/104 (86%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 563 acggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtg 622
|||| ||| |||||||||| |||||| |||||||||||| ||| |||||||||| |||
Sbjct: 524 acggtgcgcccgtcgctggaggtgacccggaaggagaggcactggccgtccaggaaggtg 583
Query: 623 ttgctctgccagttctggccccag-tgcgcgacagggcctgcca 665
||||||||||||||| ||||||| |||| |||| |||||||||
Sbjct: 584 ttgctctgccagttcatgccccagttgcgggacatggcctgcca 627
>gb|CD934022.1|CD934022 GR45.122L24R010830 GR45 Triticum aestivum cDNA clone GR45122L24,
mRNA sequence
Length = 645
Score = 87.7 bits (44), Expect = 9e-016
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 563 acggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtg 622
|||| |||||||||||||| |||||| |||||||||||| ||| |||||||||| |||
Sbjct: 524 acggtgcggccgtcgctggaggtgacccggaaggagaggcactggccgtccaggaaggtg 583
Query: 623 ttgctctgccagttctggccccag 646
||||||||||||||| |||||||
Sbjct: 584 ttgctctgccagttcatgccccag 607
>gb|BF201369.1|BF201369 WHE0990_H02_P04ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0990_H02_P04, mRNA sequence
Length = 386
Score = 85.7 bits (43), Expect = 4e-015
Identities = 92/107 (85%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 563 acggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtg 622
|||| ||||||||||||| |||||| |||||||||||| ||| ||||| ||| || |
Sbjct: 339 acggtgcggccgtcgctgagggtgacccggaaggagaggctctggccgtcgaggtccgcg 280
Query: 623 ttgctctgccagttctggccccag-tgcgcgacagggcctgccaccc 668
|||||||||||||||||||||||| |||| | || ||||||||||||
Sbjct: 279 ttgctctgccagttctggccccagttgcgggccatggcctgccaccc 233
>gb|BQ839374.1|BQ839374 WHE4165_D06_H11ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4165_D06_H11, mRNA sequence
Length = 631
Score = 85.7 bits (43), Expect = 4e-015
Identities = 92/107 (85%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 563 acggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtg 622
|||| ||||||||||||| |||||| |||||||||||| ||| ||||| ||| || |
Sbjct: 583 acggtgcggccgtcgctgagggtgacccggaaggagaggctctggccgtcgaggtccgcg 524
Query: 623 ttgctctgccagttctggccccag-tgcgcgacagggcctgccaccc 668
|||||||||||||||||||||||| |||| | || ||||||||||||
Sbjct: 523 ttgctctgccagttctggccccagttgcgggccatggcctgccaccc 477
>gb|CA714338.1|CA714338 wdk3c.pk018.l12 wdk3c Triticum aestivum cDNA clone wdk3c.pk018.l12
5' end, mRNA sequence
Length = 439
Score = 85.7 bits (43), Expect = 4e-015
Identities = 92/107 (85%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 563 acggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtg 622
|||| ||||||||||||| |||||| |||||||||||| ||| ||||| ||| || |
Sbjct: 195 acggtgcggccgtcgctgagggtgacccggaaggagaggctctggccgtcgaggtccgcg 136
Query: 623 ttgctctgccagttctggccccag-tgcgcgacagggcctgccaccc 668
|||||||||||||||||||||||| |||| | || ||||||||||||
Sbjct: 135 ttgctctgccagttctggccccagttgcgggccatggcctgccaccc 89
>gb|CD894504.1|CD894504 G118.126G10F010823 G118 Triticum aestivum cDNA clone G118126G10,
mRNA sequence
Length = 682
Score = 85.7 bits (43), Expect = 4e-015
Identities = 83/95 (87%), Gaps = 1/95 (1%)
Strand = Plus / Minus
Query: 572 ccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtgttgctctgc 631
|||||||||| |||||| |||||||||||| ||| |||||||||| ||||||||||||
Sbjct: 661 ccgtcgctggaggtgacccggaaggagaggcactggccgtccaggaaggtgttgctctgc 602
Query: 632 cagttctggccccag-tgcgcgacagggcctgcca 665
|||||| ||||||| |||| |||| |||||||||
Sbjct: 601 cagttcatgccccagttgcgggacatggcctgcca 567
>gb|CK210097.1|CK210097 FGAS021888 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1051
Score = 85.7 bits (43), Expect = 4e-015
Identities = 92/107 (85%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 563 acggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtg 622
|||| ||| ||||||||| |||||| |||||||||||| ||||||||| ||| || |
Sbjct: 780 acggtgcgcccgtcgctgagggtgacccggaaggagaggctctgcccgtcgaggtccgcg 721
Query: 623 ttgctctgccagttctggccccag-tgcgcgacagggcctgccaccc 668
|||||||||||||||||||||||| |||| | || ||||||||||||
Sbjct: 720 ttgctctgccagttctggccccagttgcgggccatggcctgccaccc 674
>gb|AY589584.1| Triticum aestivum alpha-expansin EXPA2 mRNA, complete cds
Length = 1142
Score = 83.8 bits (42), Expect = 1e-014
Identities = 111/134 (82%)
Strand = Plus / Minus
Query: 514 gaaggtctggccgaagccccagccgcgcggggcagcgttgctggagaccacggagcggcc 573
|||||||||||||||| ||||||| ||||| |||||| || | |||| ||||||
Sbjct: 788 gaaggtctggccgaaggaccagccggcgggggcggcgttgttgctggtgacggtgcggcc 729
Query: 574 gtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtgttgctctgcca 633
||||||| |||||| |||||||||||| ||| ||||| ||| || ||||||||||||
Sbjct: 728 gtcgctgagggtgacccggaaggagaggctctggccgtcgaggtccgcgttgctctgcca 669
Query: 634 gttctggccccagt 647
||||||||||||||
Sbjct: 668 gttctggccccagt 655
>gb|BE427226.1|BE427226 PSR6138 ITEC PSR Wheat Pericarp/Testa Library Triticum aestivum
cDNA clone PSR6138, mRNA sequence
Length = 1193
Score = 81.8 bits (41), Expect = 6e-014
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 584 gtgacgcggaaggagagggcctgcccgtccaggagcgtgttgctctgccagttctggccc 643
||||| |||||||||||| |||||||||| || |||| |||||||||||||||||| |||
Sbjct: 706 gtgacncggaaggagaggccctgcccgtcgagcagcgcgttgctctgccagttctgcccc 647
Query: 644 cagt 647
||||
Sbjct: 646 cagt 643
>gb|BJ270401.1|BJ270401 BJ270401 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh7i17 5', mRNA sequence
Length = 646
Score = 79.8 bits (40), Expect = 2e-013
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 568 gcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtgttgct 627
||||| |||||||| |||||||||||||||||||||||| ||| | |||| | ||||
Sbjct: 229 gcggcggtcgctggcggtgacgcggaaggagagggcctggccgacgaggatggcgttgga 170
Query: 628 ctgccagttctggccccagt 647
||||||||||||||||||||
Sbjct: 169 ctgccagttctggccccagt 150
>gb|BJ270964.1|BJ270964 BJ270964 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh23h21 5', mRNA sequence
Length = 587
Score = 79.8 bits (40), Expect = 2e-013
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 568 gcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtgttgct 627
||||| |||||||| |||||||||||||||||||||||| ||| | |||| | ||||
Sbjct: 286 gcggcggtcgctggcggtgacgcggaaggagagggcctggccgacgaggatggcgttgga 227
Query: 628 ctgccagttctggccccagt 647
||||||||||||||||||||
Sbjct: 226 ctgccagttctggccccagt 207
>gb|CD938849.1|CD938849 OV.111D22F010309 OV Triticum aestivum cDNA clone OV111D22, mRNA
sequence
Length = 677
Score = 79.8 bits (40), Expect = 2e-013
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 568 gcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtgttgct 627
||||| |||||||| |||||||||||||||||||||||| ||| | |||| | ||||
Sbjct: 160 gcggcggtcgctggcggtgacgcggaaggagagggcctggccgacgaggatggcgttgga 101
Query: 628 ctgccagttctggccccagt 647
||||||||||||||||||||
Sbjct: 100 ctgccagttctggccccagt 81
>gb|AY692477.1| Triticum aestivum alpha-expansin EXPA3 mRNA, partial cds
Length = 932
Score = 79.8 bits (40), Expect = 2e-013
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 568 gcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtgttgct 627
||||| |||||||| |||||||||||||||||||||||| ||| | |||| | ||||
Sbjct: 377 gcggcggtcgctggcggtgacgcggaaggagagggcctggccgacgaggatggcgttgga 318
Query: 628 ctgccagttctggccccagt 647
||||||||||||||||||||
Sbjct: 317 ctgccagttctggccccagt 298
>gb|AY543535.1| Triticum aestivum expansin EXPA9 mRNA, complete cds
Length = 1013
Score = 79.8 bits (40), Expect = 2e-013
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 568 gcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtgttgct 627
||||| |||||||| |||||||||||||||||||||||| ||| | |||| | ||||
Sbjct: 784 gcggcggtcgctggcggtgacgcggaaggagagggcctggccgacgaggatggcgttgga 725
Query: 628 ctgccagttctggccccagt 647
||||||||||||||||||||
Sbjct: 724 ctgccagttctggccccagt 705
>gb|BQ169431.1|BQ169431 WHE1771_F09_K17ZT Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1771_F09_K17, mRNA sequence
Length = 448
Score = 73.8 bits (37), Expect = 1e-011
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 563 acggagcggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtg 622
|||| ||||||||| ||| |||||| |||||||||||| ||| ||||| ||| || |
Sbjct: 348 acggtgcggccgtctctgagggtgacccggaaggagaggctctggccgtcgaggtccgcg 407
Query: 623 ttgctctgccagttctggccccagt 647
|||||||||||||||||||||||||
Sbjct: 408 ttgctctgccagttctggccccagt 432
>gb|CD886737.1|CD886737 G118.103C04F010605 G118 Triticum aestivum cDNA clone G118103C04,
mRNA sequence
Length = 508
Score = 71.9 bits (36), Expect = 5e-011
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 569 cggccgtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtgttgctc 628
|||| ||||||| |||||||||||||||||||||||| ||| | |||| | |||| |
Sbjct: 478 cggcggtcgctgncggtgacgcggaaggagagggcctggccgacgaggatggcgttggac 419
Query: 629 tgccagttctggccccagt 647
|||||||||||||||||||
Sbjct: 418 tgccagttctggccccagt 400
>gb|AY543529.1| Triticum aestivum expansin EXPA3 mRNA, complete cds
Length = 1106
Score = 71.9 bits (36), Expect = 5e-011
Identities = 127/156 (81%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 514 gaaggtctggccgaagccccagccgcgcggggcagcgttgctggagaccacggagcggcc 573
|||||||||||||||| ||||||| ||||| |||||| || | |||| ||||||
Sbjct: 791 gaaggtctggccgaaggaccagccggcgggggcggcgttgttgctggtgacggtgcggcc 732
Query: 574 gtcgctggtggtgacgcggaaggagagggcctgcccgtccaggagcgtgttgctctgcca 633
||||||| |||||| |||||||| | | ||| ||||| ||| || ||||||||||||
Sbjct: 731 gtcgctgaaggtgacccggaaggaaaagctctggccgtcgaggtccgcgttgctctgcca 672
Query: 634 gttctggccccag-tgcgcgacagggcctgccaccc 668
||||||||||||| |||| | || ||||||||||||
Sbjct: 671 gttctggccccagatgcgggccatggcctgccaccc 636
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 116,998
Number of Sequences: 636343
Number of extensions: 116998
Number of successful extensions: 32144
Number of sequences better than 0.5: 65
Number of HSP's better than 0.5 without gapping: 64
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 31990
Number of HSP's gapped (non-prelim): 138
length of query: 668
length of database: 367,240,239
effective HSP length: 19
effective length of query: 649
effective length of database: 355,149,722
effective search space: 230492169578
effective search space used: 230492169578
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)