BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2594147.2.1
(744 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK164806.1|CK164806 FGAS048729 Triticum aestivum FGAS: T... 92 6e-017
gb|CK167492.1|CK167492 FGAS051864 Triticum aestivum FGAS: T... 92 6e-017
gb|CK167579.1|CK167579 FGAS051973 Triticum aestivum FGAS: T... 84 2e-014
gb|CK167664.1|CK167664 FGAS052073 Triticum aestivum FGAS: T... 84 2e-014
gb|CK167771.1|CK167771 FGAS052200 Triticum aestivum FGAS: T... 84 2e-014
gb|BE422773.1|BE422773 WHE0058_A04_B08ZS Wheat endosperm cD... 70 2e-010
gb|BJ299385.1|BJ299385 BJ299385 Y. Ogihara unpublished cDNA... 70 2e-010
gb|CD903893.1|CD903893 G356.111M15F010919 G356 Triticum aes... 70 2e-010
gb|BJ235109.1|BJ235109 BJ235109 Y. Ogihara unpublished cDNA... 62 6e-008
gb|BJ236789.1|BJ236789 BJ236789 Y. Ogihara unpublished cDNA... 62 6e-008
gb|BJ237654.1|BJ237654 BJ237654 Y. Ogihara unpublished cDNA... 62 6e-008
gb|BJ292999.1|BJ292999 BJ292999 Y. Ogihara unpublished cDNA... 62 6e-008
gb|BQ806609.1|BQ806609 WHE3581_A09_B17ZS Wheat developing g... 62 6e-008
gb|CD893799.1|CD893799 G118.124J02F010828 G118 Triticum aes... 62 6e-008
gb|CD897609.1|CD897609 G174.106I03F010823 G174 Triticum aes... 62 6e-008
gb|CD900159.1|CD900159 G174.114K12R011120 G174 Triticum aes... 60 2e-007
gb|BJ240324.1|BJ240324 BJ240324 Y. Ogihara unpublished cDNA... 58 9e-007
gb|AY589581.1| Triticum aestivum beta-expansin TaEXPB4 mRNA... 58 9e-007
gb|BE493526.1|BE493526 WHE0579_B12_B12ZE Triticum monococcu... 56 4e-006
gb|BJ247259.1|BJ247259 BJ247259 Y. Ogihara unpublished cDNA... 56 4e-006
gb|BJ253316.1|BJ253316 BJ253316 Y. Ogihara unpublished cDNA... 56 4e-006
gb|CK166717.1|CK166717 FGAS050915 Triticum aestivum FGAS: T... 56 4e-006
gb|CK167447.1|CK167447 FGAS051809 Triticum aestivum FGAS: T... 56 4e-006
gb|CK168342.1|CK168342 FGAS052869 Triticum aestivum FGAS: T... 56 4e-006
gb|BF428858.1|BF428858 WHE1710_C02_E04ZS Wheat heat stresse... 54 1e-005
gb|CD893554.1|CD893554 G118.123P05R011115 G118 Triticum aes... 54 1e-005
gb|CD905001.1|CD905001 G468.100D20F010614 G468 Triticum aes... 54 1e-005
gb|CD907763.1|CD907763 G468.107P11F010813 G468 Triticum aes... 54 1e-005
gb|CV066380.1|CV066380 WNEL3b8 Wheat EST endosperm library ... 54 1e-005
gb|BJ259963.1|BJ259963 BJ259963 Y. Ogihara unpublished cDNA... 52 6e-005
gb|BJ265678.1|BJ265678 BJ265678 Y. Ogihara unpublished cDNA... 52 6e-005
gb|CD900158.1|CD900158 G174.114K12F010824 G174 Triticum aes... 52 6e-005
gb|CN011031.1|CN011031 WHE3879_A11_A21ZS Wheat Fusarium gra... 52 6e-005
gb|AY533100.1| Triticum aestivum beta-expansin 1 (EXPB1) mR... 52 6e-005
gb|AY533101.1| Triticum aestivum beta-expansin 1 (EXPB1) mR... 52 6e-005
gb|AY533102.1| Triticum aestivum beta-expansin 2 (EXPB2) mR... 52 6e-005
gb|AY533103.1| Triticum aestivum beta-expansin 1 (EXPB1) ge... 52 6e-005
gb|AY533104.1| Triticum aestivum beta-expansin 2 (EXPB2) ge... 52 6e-005
gb|BE420061.1|BE420061 WWS02.F9R000101 ITEC WWS Wheat Scute... 50 2e-004
gb|BE426055.1|BE426055 WHE0327_C05_F09ZS Wheat unstressed s... 50 2e-004
gb|BE496838.1|BE496838 WHE0761_F08_L15ZS Wheat heat-stresse... 50 2e-004
gb|BE516112.1|BE516112 WHE612_B11_D22ZA Wheat ABA-treated e... 50 2e-004
gb|BF200271.1|BF200271 WHE2254_H10_P20ZE Triticum monococcu... 50 2e-004
gb|BG607190.1|BG607190 WHE2472_E02_I04ZS Triticum monococcu... 50 2e-004
gb|BJ282673.1|BJ282673 BJ282673 Y. Ogihara unpublished cDNA... 50 2e-004
gb|BQ743343.1|BQ743343 WHE4102_H05_O10ZS Wheat salt-stresse... 50 2e-004
gb|BQ752757.1|BQ752757 WHE4118_G09_M18ZS Wheat salt-stresse... 50 2e-004
gb|BU100291.1|BU100291 WHE3351_E09_I17ZS Chinese Spring alu... 50 2e-004
gb|CA602800.1|CA602800 wr1.pk0008.d6 wr1 Triticum aestivum ... 50 2e-004
gb|CA618328.1|CA618328 wl1n.pk0032.f12 wl1n Triticum aestiv... 50 2e-004
gb|CD873783.1|CD873783 AZO3.100K14R011123 AZO3 Triticum aes... 50 2e-004
gb|CD876827.1|CD876827 AZO3.111A15F011010 AZO3 Triticum aes... 50 2e-004
gb|CK195409.1|CK195409 FGAS003848 Triticum aestivum FGAS: L... 50 2e-004
gb|CK198714.1|CK198714 FGAS007201 Triticum aestivum FGAS: L... 50 2e-004
gb|CK211812.1|CK211812 FGAS023673 Triticum aestivum FGAS: L... 50 2e-004
gb|AJ611846.1|AJ611846 AJ611846 Triticum turgidum subsp. du... 50 2e-004
gb|AJ613085.1|AJ613085 AJ613085 Triticum turgidum subsp. du... 50 2e-004
gb|CV778638.1|CV778638 FGAS073047 Triticum aestivum FGAS: L... 50 2e-004
gb|DR739962.1|DR739962 FGAS000228 Triticum aestivum FGAS: L... 50 2e-004
gb|AY589580.1| Triticum aestivum beta-expansin TaEXPB3 mRNA... 50 2e-004
gb|AY543540.1| Triticum aestivum expansin EXPB5 mRNA, compl... 50 2e-004
gb|BJ242327.1|BJ242327 BJ242327 Y. Ogihara unpublished cDNA... 48 9e-004
gb|BJ246126.1|BJ246126 BJ246126 Y. Ogihara unpublished cDNA... 48 9e-004
gb|CA741453.1|CA741453 wia1c.pk002.p10 wia1c Triticum aesti... 48 9e-004
gb|CK152852.1|CK152852 FGAS035928 Triticum aestivum FGAS: T... 48 9e-004
gb|AJ614162.1|AJ614162 AJ614162 Triticum turgidum subsp. du... 48 9e-004
gb|CA654411.1|CA654411 wre1n.pk164.h2 wre1n Triticum aestiv... 46 0.003
gb|CK164581.1|CK164581 FGAS048495 Triticum aestivum FGAS: T... 46 0.003
gb|AY543541.1| Triticum aestivum expansin EXPB7 mRNA, compl... 46 0.003
gb|BQ236169.1|BQ236169 TaE05037C12F TaE05 Triticum aestivum... 44 0.014
gb|CD885826.1|CD885826 G118.100J07F010507 G118 Triticum aes... 44 0.014
gb|BQ484139.1|BQ484139 WHE3516_G11_N22ZS Wheat unstressed r... 42 0.054
gb|AL818337.1|AL818337 AL818337 j:223 Triticum aestivum cDN... 42 0.054
gb|AL820997.1|AL820997 AL820997 O:232 Triticum aestivum cDN... 42 0.054
gb|BQ839391.1|BQ839391 WHE4165_E11_J21ZS Wheat CS whole pla... 42 0.054
gb|BU099251.1|BU099251 WHE3305_C11_E21ZS Chinese Spring whe... 42 0.054
gb|CD873782.1|CD873782 AZO3.100K14F010925 AZO3 Triticum aes... 42 0.054
gb|CK163412.1|CK163412 FGAS016039 Triticum aestivum FGAS: L... 42 0.054
gb|CK217350.1|CK217350 FGAS029352 Triticum aestivum FGAS: L... 42 0.054
gb|BF292972.1|BF292972 WHE2163_B04_C07ZS Triticum turgidum ... 40 0.21
gb|BM134986.1|BM134986 WHE0460_E10_I19ZS Wheat Fusarium gra... 40 0.21
gb|BJ222680.1|BJ222680 BJ222680 Y. Ogihara unpublished cDNA... 40 0.21
gb|BJ240582.1|BJ240582 BJ240582 Y. Ogihara unpublished cDNA... 40 0.21
gb|BJ241482.1|BJ241482 BJ241482 Y. Ogihara unpublished cDNA... 40 0.21
gb|BJ299585.1|BJ299585 BJ299585 Y. Ogihara unpublished cDNA... 40 0.21
gb|BQ245149.1|BQ245149 TaE15030A03R TaE15 Triticum aestivum... 40 0.21
gb|CA725021.1|CA725021 wds3f.pk003.m6 wds3f Triticum aestiv... 40 0.21
gb|BQ167140.1|BQ167140 WHE0058_A04_B08ZK Cheyenne wheat end... 40 0.21
gb|CD897610.1|CD897610 G174.106I03R011120 G174 Triticum aes... 40 0.21
gb|CD903894.1|CD903894 G356.111M15R011024 G356 Triticum aes... 40 0.21
gb|CK164720.1|CK164720 FGAS048638 Triticum aestivum FGAS: T... 40 0.21
gb|CK201768.1|CK201768 FGAS010288 Triticum aestivum FGAS: L... 40 0.21
gb|CV776014.1|CV776014 FGAS070418 Triticum aestivum FGAS: L... 40 0.21
emb|AJ890019.1| Triticum aestivum mRNA for expansin EXPB11 ... 40 0.21
>gb|CK164806.1|CK164806 FGAS048729 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 874
Score = 91.7 bits (46), Expect = 6e-017
Identities = 141/172 (81%), Gaps = 3/172 (1%)
Strand = Plus / Plus
Query: 282 tcacagccacgccgccagaccggtacgcgacgccggcgttccaccccgcaggtatggcgt 341
|||| ||||||||||| | | ||||||| ||||||| ||||||||| | ||||||||||
Sbjct: 473 tcaccgccacgccgcctggctggtacgccacgccggggttccacccggtgggtatggcgt 532
Query: 342 tgctggcgacgagcgccctgccagagctgaaggtgaggcggatgttgaaggggccctgga 401
||| |||||||||| | |||| || ||||| || ||||||||| ||||||||||||||
Sbjct: 533 tgccggcgacgagcatcttgccggacctgaacgtcaggcggatggagaaggggccctgga 592
Query: 402 ggacggagccggagttgatcttccacacggcgccccacgactgctgcatcgg 453
|| ||| || || | ||||||||| || ||||| ||||||||||||||
Sbjct: 593 gggtggacccagaa---agcttccacaccgcaccccaggactgctgcatcgg 641
Score = 44.1 bits (22), Expect = 0.014
Identities = 67/82 (81%)
Strand = Plus / Plus
Query: 483 tctgcatcatgtccacggagtcgagggcgctgtcgctatcctcgtactcgatcagcacgg 542
||||||| ||||| |||| || ||| ||||||||| ||||||||||||| ||| | ||
Sbjct: 671 tctgcatgatgtcgacggcgtaaaggtcgctgtcgccgtcctcgtactcgaccaggatgg 730
Query: 543 ccaggtagttcgggttggagcc 564
| ||||||| ||||| |||||
Sbjct: 731 cgaggtagtcggggttcgagcc 752
>gb|CK167492.1|CK167492 FGAS051864 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1170
Score = 91.7 bits (46), Expect = 6e-017
Identities = 141/172 (81%), Gaps = 3/172 (1%)
Strand = Plus / Minus
Query: 282 tcacagccacgccgccagaccggtacgcgacgccggcgttccaccccgcaggtatggcgt 341
|||| ||||||||||| | | ||||||| ||||||| ||||||||| | ||||||||||
Sbjct: 744 tcaccgccacgccgcctggctggtacgccacgccggggttccacccggtgggtatggcgt 685
Query: 342 tgctggcgacgagcgccctgccagagctgaaggtgaggcggatgttgaaggggccctgga 401
||| |||||||||| | |||| || ||||| || ||||||||| ||||||||||||||
Sbjct: 684 tgccggcgacgagcatcttgccggacctgaacgtcaggcggatggagaaggggccctgga 625
Query: 402 ggacggagccggagttgatcttccacacggcgccccacgactgctgcatcgg 453
|| ||| || || | ||||||||| || ||||| ||||||||||||||
Sbjct: 624 gggtggacccagaa---agcttccacaccgcaccccaggactgctgcatcgg 576
Score = 67.9 bits (34), Expect = 9e-010
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 483 tctgcatcatgtccacggagtcgagggcgctgtcgctatcctcgtactcgatcagcacgg 542
||||||| ||||| |||| || |||| ||||||||| ||||||||||||| ||| | ||
Sbjct: 546 tctgcatgatgtcgacggcgtagaggtcgctgtcgccgtcctcgtactcgaccaggatgg 487
Query: 543 ccaggtagttcgggttggagcc 564
| |||||||||||||| |||||
Sbjct: 486 cgaggtagttcgggttcgagcc 465
Score = 52.0 bits (26), Expect = 6e-005
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 674 gccaaggcaccgaacgctgtcccgctcatgtcgaagtg 711
|||| ||| ||||| |||||||||||||||||||||||
Sbjct: 355 gccatggcgccgaatgctgtcccgctcatgtcgaagtg 318
>gb|CK167579.1|CK167579 FGAS051973 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1197
Score = 83.8 bits (42), Expect = 2e-014
Identities = 140/172 (81%), Gaps = 3/172 (1%)
Strand = Plus / Plus
Query: 282 tcacagccacgccgccagaccggtacgcgacgccggcgttccaccccgcaggtatggcgt 341
|||| ||||||||||| | | ||||||| ||||||| ||||||||| | ||||||||||
Sbjct: 433 tcaccgccacgccgcctggctggtacgccacgccggggttccacccggtgggtatggcgt 492
Query: 342 tgctggcgacgagcgccctgccagagctgaaggtgaggcggatgttgaaggggccctgga 401
||| |||||||||| | |||| || ||||| || ||||||||| |||| |||||||||
Sbjct: 493 tgccggcgacgagcatcttgccggacctgaacgtcaggcggatggagaagaggccctgga 552
Query: 402 ggacggagccggagttgatcttccacacggcgccccacgactgctgcatcgg 453
|| ||| || || | ||||||||| || ||||| ||||||||||||||
Sbjct: 553 gggtggacccagaa---agcttccacaccgcaccccaggactgctgcatcgg 601
Score = 67.9 bits (34), Expect = 9e-010
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 483 tctgcatcatgtccacggagtcgagggcgctgtcgctatcctcgtactcgatcagcacgg 542
||||||| ||||| |||| || |||| ||||||||| ||||||||||||| ||| | ||
Sbjct: 631 tctgcatgatgtcgacggcgtagaggtcgctgtcgccgtcctcgtactcgaccaggatgg 690
Query: 543 ccaggtagttcgggttggagcc 564
| |||||||||||||| |||||
Sbjct: 691 cgaggtagttcgggttcgagcc 712
Score = 52.0 bits (26), Expect = 6e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 674 gccaaggcaccgaacgctgtcccgctcatgtcgaagtg 711
|||| ||| ||||| |||||||||||||||||||||||
Sbjct: 822 gccatggcgccgaatgctgtcccgctcatgtcgaagtg 859
>gb|CK167664.1|CK167664 FGAS052073 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1219
Score = 83.8 bits (42), Expect = 2e-014
Identities = 140/172 (81%), Gaps = 3/172 (1%)
Strand = Plus / Plus
Query: 282 tcacagccacgccgccagaccggtacgcgacgccggcgttccaccccgcaggtatggcgt 341
|||| ||||||||||| | | ||||||| ||| ||| ||||||||| | ||||||||||
Sbjct: 408 tcaccgccacgccgcctggctggtacgccacgtcggggttccacccggtgggtatggcgt 467
Query: 342 tgctggcgacgagcgccctgccagagctgaaggtgaggcggatgttgaaggggccctgga 401
||| |||||||||| | |||| || ||||| || ||||||||| ||||||||||||||
Sbjct: 468 tgccggcgacgagcatcttgccggacctgaacgtcaggcggatggagaaggggccctgga 527
Query: 402 ggacggagccggagttgatcttccacacggcgccccacgactgctgcatcgg 453
|| ||| || || | ||||||||| || ||||| ||||||||||||||
Sbjct: 528 gggtggacccagaa---agcttccacaccgcaccccaggactgctgcatcgg 576
Score = 67.9 bits (34), Expect = 9e-010
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 483 tctgcatcatgtccacggagtcgagggcgctgtcgctatcctcgtactcgatcagcacgg 542
||||||| ||||| |||| || |||| ||||||||| ||||||||||||| ||| | ||
Sbjct: 606 tctgcatgatgtcgacggcgtagaggtcgctgtcgccgtcctcgtactcgaccaggatgg 665
Query: 543 ccaggtagttcgggttggagcc 564
| |||||||||||||| |||||
Sbjct: 666 cgaggtagttcgggttcgagcc 687
Score = 52.0 bits (26), Expect = 6e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 674 gccaaggcaccgaacgctgtcccgctcatgtcgaagtg 711
|||| ||| ||||| |||||||||||||||||||||||
Sbjct: 797 gccatggcgccgaatgctgtcccgctcatgtcgaagtg 834
>gb|CK167771.1|CK167771 FGAS052200 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1137
Score = 83.8 bits (42), Expect = 2e-014
Identities = 140/172 (81%), Gaps = 3/172 (1%)
Strand = Plus / Plus
Query: 282 tcacagccacgccgccagaccggtacgcgacgccggcgttccaccccgcaggtatggcgt 341
|||| ||||||||||| | | ||||||| ||||||| ||||||||| | ||||||||||
Sbjct: 413 tcaccgccacgccgcctggctggtacgccacgccggggttccacccggtgggtatggcgt 472
Query: 342 tgctggcgacgagcgccctgccagagctgaaggtgaggcggatgttgaaggggccctgga 401
||| |||||||||| | |||| || ||||| || ||||||||| || |||||||||||
Sbjct: 473 tgccggcgacgagcatcttgccggacctgaacgtcaggcggatggagagggggccctgga 532
Query: 402 ggacggagccggagttgatcttccacacggcgccccacgactgctgcatcgg 453
|| ||| || || | ||||||||| || ||||| ||||||||||||||
Sbjct: 533 gggtggacccagaa---agcttccacaccgcaccccaggactgctgcatcgg 581
Score = 67.9 bits (34), Expect = 9e-010
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 483 tctgcatcatgtccacggagtcgagggcgctgtcgctatcctcgtactcgatcagcacgg 542
||||||| ||||| |||| || |||| ||||||||| ||||||||||||| ||| | ||
Sbjct: 611 tctgcatgatgtcgacggcgtagaggtcgctgtcgccgtcctcgtactcgaccaggatgg 670
Query: 543 ccaggtagttcgggttggagcc 564
| |||||||||||||| |||||
Sbjct: 671 cgaggtagttcgggttcgagcc 692
Score = 52.0 bits (26), Expect = 6e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 674 gccaaggcaccgaacgctgtcccgctcatgtcgaagtg 711
|||| ||| ||||| |||||||||||||||||||||||
Sbjct: 802 gccatggcgccgaatgctgtcccgctcatgtcgaagtg 839
>gb|BE422773.1|BE422773 WHE0058_A04_B08ZS Wheat endosperm cDNA library Triticum aestivum
cDNA clone WHE0058_A04_B08, mRNA sequence
Length = 606
Score = 69.9 bits (35), Expect = 2e-010
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 660 cctgcccgggcttcgccaaggcaccgaacgctgtcccgctcatgtcgaagtggac 714
|||| ||||||||||||| | | |||||||| |||||||||||||||||||||||
Sbjct: 472 cctggccgggcttcgccatgccgccgaacgccgtcccgctcatgtcgaagtggac 418
>gb|BJ299385.1|BJ299385 BJ299385 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl30b20 3', mRNA sequence
Length = 643
Score = 69.9 bits (35), Expect = 2e-010
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 660 cctgcccgggcttcgccaaggcaccgaacgctgtcccgctcatgtcgaagtggac 714
|||| ||||||||||||| | | |||||||| |||||||||||||||||||||||
Sbjct: 544 cctggccgggcttcgccatgccgccgaacgccgtcccgctcatgtcgaagtggac 598
Score = 40.1 bits (20), Expect = 0.21
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 521 tcctcgtactcgatcagcacggccaggtagttcgggttggagcc 564
|||||||||||||| |||| ||| ||||||| | |||||||||
Sbjct: 405 tcctcgtactcgatgagcatggcgaggtagtaggagttggagcc 448
>gb|CD903893.1|CD903893 G356.111M15F010919 G356 Triticum aestivum cDNA clone G356111M15,
mRNA sequence
Length = 629
Score = 69.9 bits (35), Expect = 2e-010
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 660 cctgcccgggcttcgccaaggcaccgaacgctgtcccgctcatgtcgaagtggac 714
|||| ||||||||||||| | | |||||||| |||||||||||||||||||||||
Sbjct: 489 cctggccgggcttcgccatgccgccgaacgccgtcccgctcatgtcgaagtggac 435
>gb|BJ235109.1|BJ235109 BJ235109 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe15e02 5', mRNA sequence
Length = 655
Score = 61.9 bits (31), Expect = 6e-008
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 660 cctgcccgggcttcgccaaggcaccgaacgctgtcccgctcatgtcgaagtggac 714
|||| ||||||||||||| | | |||||||| |||||||||| ||||||||||||
Sbjct: 479 cctggccgggcttcgccatgccgccgaacgccgtcccgctcaggtcgaagtggac 425
Score = 40.1 bits (20), Expect = 0.21
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 521 tcctcgtactcgatcagcacggccaggtagttcgggttggagcc 564
|||||||||||||| |||| ||| ||||||| | |||||||||
Sbjct: 618 tcctcgtactcgatgagcatggcgaggtagtaggagttggagcc 575
>gb|BJ236789.1|BJ236789 BJ236789 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe23c04 5', mRNA sequence
Length = 659
Score = 61.9 bits (31), Expect = 6e-008
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 660 cctgcccgggcttcgccaaggcaccgaacgctgtcccgctcatgtcgaagtggac 714
|||| ||||||||||||| | | |||||||| |||||||||| ||||||||||||
Sbjct: 224 cctggccgggcttcgccatgccgccgaacgccgtcccgctcaggtcgaagtggac 170
Score = 40.1 bits (20), Expect = 0.21
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 521 tcctcgtactcgatcagcacggccaggtagttcgggttggagcc 564
|||||||||||||| |||| ||| ||||||| | |||||||||
Sbjct: 363 tcctcgtactcgatgagcatggcgaggtagtaggagttggagcc 320
>gb|BJ237654.1|BJ237654 BJ237654 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe10k17 3', mRNA sequence
Length = 714
Score = 61.9 bits (31), Expect = 6e-008
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 660 cctgcccgggcttcgccaaggcaccgaacgctgtcccgctcatgtcgaagtggac 714
|||| ||||||||||||| | | |||||||| |||||||||| ||||||||||||
Sbjct: 598 cctggccgggcttcgccatgccgccgaacgccgtcccgctcaggtcgaagtggac 652
Score = 48.1 bits (24), Expect = 9e-004
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 521 tcctcgtactcgatcagcacggccaggtagttcgggttggagcccggc 568
|||||||||||||| |||| ||| ||||||| | |||||||||||||
Sbjct: 458 tcctcgtactcgatgagcatggcgaggtagtaggagttggagcccggc 505
>gb|BJ292999.1|BJ292999 BJ292999 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl30b20 5', mRNA sequence
Length = 470
Score = 61.9 bits (31), Expect = 6e-008
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 668 ggcttcgccaaggcaccgaacgctgtcccgctcatgtcgaagtggac 714
|||||||||| | | |||||||| |||||||||||||||||||||||
Sbjct: 470 ggcttcgccatgccgccgaacgccgtcccgctcatgtcgaagtggac 424
>gb|BQ806609.1|BQ806609 WHE3581_A09_B17ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3581_A09_B17, mRNA sequence
Length = 733
Score = 61.9 bits (31), Expect = 6e-008
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 660 cctgcccgggcttcgccaaggcaccgaacgctgtcccgctcatgtcgaagtggac 714
|||| ||||||||||||| | | |||||||| |||||||||| ||||||||||||
Sbjct: 129 cctggccgggcttcgccatgccgccgaacgccgtcccgctcaggtcgaagtggac 75
Score = 40.1 bits (20), Expect = 0.21
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 521 tcctcgtactcgatcagcacggccaggtagttcgggttggagcc 564
|||||||||||||| |||| ||| ||||||| | |||||||||
Sbjct: 268 tcctcgtactcgatgagcatggcgaggtagtaggagttggagcc 225
>gb|CD893799.1|CD893799 G118.124J02F010828 G118 Triticum aestivum cDNA clone G118124J02,
mRNA sequence
Length = 792
Score = 61.9 bits (31), Expect = 6e-008
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 660 cctgcccgggcttcgccaaggcaccgaacgctgtcccgctcatgtcgaagtggac 714
|||| ||||||||||||| | | |||||||| |||||||||| ||||||||||||
Sbjct: 499 cctggccgggcttcgccatgccgccgaacgccgtcccgctcaggtcgaagtggac 445
Score = 40.1 bits (20), Expect = 0.21
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 521 tcctcgtactcgatcagcacggccaggtagttcgggttggagcc 564
|||||||||||||| |||| ||| ||||||| | |||||||||
Sbjct: 638 tcctcgtactcgatgagcatggcgaggtagtaggagttggagcc 595
>gb|CD897609.1|CD897609 G174.106I03F010823 G174 Triticum aestivum cDNA clone G174106I03,
mRNA sequence
Length = 592
Score = 61.9 bits (31), Expect = 6e-008
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 660 cctgcccgggcttcgccaaggcaccgaacgctgtcccgctcatgtcgaagtggac 714
|||| ||||||||||||| | | |||||||| |||||||||| ||||||||||||
Sbjct: 496 cctggccgggcttcgccatgccgccgaacgccgtcccgctcaggtcgaagtggac 442
>gb|CD900159.1|CD900159 G174.114K12R011120 G174 Triticum aestivum cDNA clone G174114K12,
mRNA sequence
Length = 615
Score = 60.0 bits (30), Expect = 2e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 660 cctgcccgggcttcgccaaggcaccgaacgctgtcccgctcatgtcgaag 709
|||| ||||||||||||||| | |||||||| |||||||||| |||||||
Sbjct: 562 cctggccgggcttcgccaagccgccgaacgccgtcccgctcaggtcgaag 611
>gb|BJ240324.1|BJ240324 BJ240324 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe15e02 3', mRNA sequence
Length = 631
Score = 58.0 bits (29), Expect = 9e-007
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 660 cctgcccgggcttcgccaaggcaccgaacgctgtcccgctcatgtcgaagtg 711
|||| ||||||||||||| | | |||||||| |||||||||| |||||||||
Sbjct: 580 cctggccgggcttcgccatgccgccgaacgccgtcccgctcangtcgaagtg 631
Score = 40.1 bits (20), Expect = 0.21
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 521 tcctcgtactcgatcagcacggccaggtagttcgggttggagcc 564
|||||||||||||| |||| ||| ||||||| | |||||||||
Sbjct: 441 tcctcgtactcgatgagcatggcgaggtagtaggagttggagcc 484
>gb|AY589581.1| Triticum aestivum beta-expansin TaEXPB4 mRNA, complete cds
Length = 898
Score = 58.0 bits (29), Expect = 9e-007
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 535 cagcacggccaggtagttcgggttggagcccggctccaccgagaaggtcacgt 587
|||||||||||||||||| |||||||||||| |||| ||| |||| ||||||
Sbjct: 594 cagcacggccaggtagttggggttggagccccgctcgacctggaagttcacgt 542
Score = 40.1 bits (20), Expect = 0.21
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 665 ccgggcttcgccaaggcaccgaacgctgtcccgctcatgtcgaa 708
||||||||||||| ||| |||||||| || ||||| | ||||||
Sbjct: 464 ccgggcttcgccatggcgccgaacgccgtgccgctgaggtcgaa 421
>gb|BE493526.1|BE493526 WHE0579_B12_B12ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE0579_B12_B12, mRNA
sequence
Length = 492
Score = 56.0 bits (28), Expect = 4e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 535 cagcacggccaggtagttcgggttggagcccggctc 570
|||||||||||||||||| |||||||||||| ||||
Sbjct: 170 cagcacggccaggtagttggggttggagccccgctc 135
>gb|BJ247259.1|BJ247259 BJ247259 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf28f05 5', mRNA sequence
Length = 624
Score = 56.0 bits (28), Expect = 4e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 535 cagcacggccaggtagttcgggttggagcccggctc 570
|||||||||||||||||| |||||||||||| ||||
Sbjct: 569 cagcacggccaggtagttggggttggagccccgctc 534
Score = 40.1 bits (20), Expect = 0.21
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 665 ccgggcttcgccaaggcaccgaacgctgtcccgctcatgtcgaa 708
||||||||||||| ||| |||||||| || ||||| | ||||||
Sbjct: 439 ccgggcttcgccatggcgccgaacgccgtgccgctgaggtcgaa 396
>gb|BJ253316.1|BJ253316 BJ253316 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf28f05 3', mRNA sequence
Length = 575
Score = 56.0 bits (28), Expect = 4e-006
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 535 cagcacggccaggtagttcgggttggagcccggctc 570
|||||||||||||||||| |||||||||||| ||||
Sbjct: 536 cagcacggccaggtagttggggttggagccccgctc 571
>gb|CK166717.1|CK166717 FGAS050915 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1151
Score = 56.0 bits (28), Expect = 4e-006
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 535 cagcacggccaggtagttcgggttggagcccggctc 570
|||||||||||||||||| |||||||||||| ||||
Sbjct: 700 cagcacggccaggtagttggggttggagccccgctc 735
>gb|CK167447.1|CK167447 FGAS051809 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1159
Score = 56.0 bits (28), Expect = 4e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 535 cagcacggccaggtagttcgggttggagcccggctc 570
|||||||||||||||||| |||||||||||| ||||
Sbjct: 693 cagcacggccaggtagttggggttggagccccgctc 658
Score = 40.1 bits (20), Expect = 0.21
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 665 ccgggcttcgccaaggcaccgaacgctgtcccgctcatgtcgaa 708
||||||||||||| ||| |||||||| || ||||| | ||||||
Sbjct: 563 ccgggcttcgccatggcgccgaacgccgtgccgctgaggtcgaa 520
>gb|CK168342.1|CK168342 FGAS052869 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1139
Score = 56.0 bits (28), Expect = 4e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 535 cagcacggccaggtagttcgggttggagcccggctc 570
|||||||||||||||||| |||||||||||| ||||
Sbjct: 690 cagcacggccaggtagttggggttggagccccgctc 655
Score = 40.1 bits (20), Expect = 0.21
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 665 ccgggcttcgccaaggcaccgaacgctgtcccgctcatgtcgaa 708
||||||||||||| ||| |||||||| || ||||| | ||||||
Sbjct: 560 ccgggcttcgccatggcgccgaacgccgtgccgctgaggtcgaa 517
>gb|BF428858.1|BF428858 WHE1710_C02_E04ZS Wheat heat stressed spike cDNA library Triticum
aestivum cDNA clone WHE1710_C02_E04, mRNA sequence
Length = 493
Score = 54.0 bits (27), Expect = 1e-005
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 660 cctgcccgggcttcgccaaggcaccgaacgctgtcccgctcatgtcgaagtggac 714
|||| |||||||| |||| | | |||||||| |||||||||| ||||||||||||
Sbjct: 473 cctggccgggctttgccatgccgccgaacgccgtcccgctcaggtcgaagtggac 419
>gb|CD893554.1|CD893554 G118.123P05R011115 G118 Triticum aestivum cDNA clone G118123P05,
mRNA sequence
Length = 725
Score = 54.0 bits (27), Expect = 1e-005
Identities = 155/195 (79%), Gaps = 2/195 (1%)
Strand = Plus / Minus
Query: 521 tcctcgtactcgatcagcacggccaggtagttcgggttggagcccggctccaccgagaag 580
|||||||||||||| |||| ||| ||||||| | ||||||||| | |||||| ||||
Sbjct: 640 tcctcgtactcgatgagcatggcgaggtagtaggagttggagccggcgtccaccttgaag 581
Query: 581 gtcacgtccacgccaggccactcgcactgcacccgggtatactggatttggatggcg-cc 639
| | ||||| || ||||| | |||| | ||||| || ||||||||||||| | || ||
Sbjct: 580 gctatgtccatccccggccagttgcacgggacccgtgtgtactggatttgga-gacgtcc 522
Query: 640 ggcgccacgcagctggctctcctgcccgggcttcgccaaggcaccgaacgctgtcccgct 699
|||| | || |||||| |||| ||||||||||||| | | |||||||| ||||||||
Sbjct: 521 ggcggcgcggagctggtcggcctggccgggcttcgccatgccgccgaacgccgtcccgct 462
Query: 700 catgtcgaagtggac 714
| ||||||||||||
Sbjct: 461 gaggtcgaagtggac 447
>gb|CD905001.1|CD905001 G468.100D20F010614 G468 Triticum aestivum cDNA clone G468100D20,
mRNA sequence
Length = 671
Score = 54.0 bits (27), Expect = 1e-005
Identities = 155/195 (79%), Gaps = 2/195 (1%)
Strand = Plus / Minus
Query: 521 tcctcgtactcgatcagcacggccaggtagttcgggttggagcccggctccaccgagaag 580
|||||||||||||| |||| ||| ||||||| | ||||||||| | |||||| ||||
Sbjct: 511 tcctcgtactcgatgagcatggcgaggtagtaggagttggagccggcgtccaccttgaag 452
Query: 581 gtcacgtccacgccaggccactcgcactgcacccgggtatactggatttggatggcg-cc 639
| | ||||| || ||||| | |||| | ||||| || ||||||||||||| | || ||
Sbjct: 451 gctatgtccatccccggccagttgcacgggacccgtgtgtactggatttgga-gacgtcc 393
Query: 640 ggcgccacgcagctggctctcctgcccgggcttcgccaaggcaccgaacgctgtcccgct 699
|||| | || |||||| |||| ||||||||||||| | | |||||||| ||||||||
Sbjct: 392 ggcggcgcggagctggtcggcctggccgggcttcgccatgccgccgaacgccgtcccgct 333
Query: 700 catgtcgaagtggac 714
| ||||||||||||
Sbjct: 332 gaggtcgaagtggac 318
>gb|CD907763.1|CD907763 G468.107P11F010813 G468 Triticum aestivum cDNA clone G468107P11,
mRNA sequence
Length = 680
Score = 54.0 bits (27), Expect = 1e-005
Identities = 155/195 (79%), Gaps = 2/195 (1%)
Strand = Plus / Minus
Query: 521 tcctcgtactcgatcagcacggccaggtagttcgggttggagcccggctccaccgagaag 580
|||||||||||||| |||| ||| ||||||| | ||||||||| | |||||| ||||
Sbjct: 632 tcctcgtactcgatgagcatggcgaggtagtaggagttggagccggcgtccaccttgaag 573
Query: 581 gtcacgtccacgccaggccactcgcactgcacccgggtatactggatttggatggcg-cc 639
| | ||||| || ||||| | |||| | ||||| || ||||||||||||| | || ||
Sbjct: 572 gctatgtccatccccggccagttgcacgggacccgtgtgtactggatttgga-gacgtcc 514
Query: 640 ggcgccacgcagctggctctcctgcccgggcttcgccaaggcaccgaacgctgtcccgct 699
|||| | || |||||| |||| ||||||||||||| | | |||||||| ||||||||
Sbjct: 513 ggcggcgcggagctggtcggcctggccgggcttcgccatgccgccgaacgccgtcccgct 454
Query: 700 catgtcgaagtggac 714
| ||||||||||||
Sbjct: 453 gaggtcgaagtggac 439
>gb|CV066380.1|CV066380 WNEL3b8 Wheat EST endosperm library Triticum aestivum cDNA clone
WNEL3b8 5' similar to Zea mays PCO119167 mRNA sequence
Length = 469
Score = 54.0 bits (27), Expect = 1e-005
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 522 cctcgtactcgatcagcacggccaggtagttcgggttggagcc 564
|||||||||| || ||||| || ||||||||||||||||||||
Sbjct: 160 cctcgtactctatgagcactgcgaggtagttcgggttggagcc 118
>gb|BJ259963.1|BJ259963 BJ259963 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh22p01 5', mRNA sequence
Length = 635
Score = 52.0 bits (26), Expect = 6e-005
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 536 agcacggccaggtagttcgggttggagccc 565
||||||||||||||||| ||||||||||||
Sbjct: 579 agcacggccaggtagttggggttggagccc 550
>gb|BJ265678.1|BJ265678 BJ265678 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh22p01 3', mRNA sequence
Length = 685
Score = 52.0 bits (26), Expect = 6e-005
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 536 agcacggccaggtagttcgggttggagccc 565
||||||||||||||||| ||||||||||||
Sbjct: 446 agcacggccaggtagttggggttggagccc 475
>gb|CD900158.1|CD900158 G174.114K12F010824 G174 Triticum aestivum cDNA clone G174114K12,
mRNA sequence
Length = 545
Score = 52.0 bits (26), Expect = 6e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 665 ccgggcttcgccaaggcaccgaacgctgtcccgctcatgtcgaagtggac 714
||||| ||||||| | | |||||||| |||||||||| ||||||||||||
Sbjct: 463 ccgggattcgccatgccgccgaacgccgtcccgctcaggtcgaagtggac 414
>gb|CN011031.1|CN011031 WHE3879_A11_A21ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3879_A11_A21,
mRNA sequence
Length = 511
Score = 52.0 bits (26), Expect = 6e-005
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 282 tcacagccacgccgccagaccggtacgcgacgccggcgttccaccccgcaggtatggcgt 341
|||| ||||||||||| | | |||| || ||||||| ||||||||| | ||||||||||
Sbjct: 139 tcaccgccacgccgcccggctggtatgccacgccggggttccacccggtgggtatggcgt 80
Query: 342 tgctggcgacgagc 355
||| ||||| ||||
Sbjct: 79 tgccggcgaagagc 66
>gb|AY533100.1| Triticum aestivum beta-expansin 1 (EXPB1) mRNA, partial cds
Length = 496
Score = 52.0 bits (26), Expect = 6e-005
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 536 agcacggccaggtagttcgggttggagccc 565
||||||||||||||||| ||||||||||||
Sbjct: 67 agcacggccaggtagttggggttggagccc 38
>gb|AY533101.1| Triticum aestivum beta-expansin 1 (EXPB1) mRNA, complete cds
Length = 1111
Score = 52.0 bits (26), Expect = 6e-005
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 536 agcacggccaggtagttcgggttggagccc 565
||||||||||||||||| ||||||||||||
Sbjct: 607 agcacggccaggtagttggggttggagccc 578
>gb|AY533102.1| Triticum aestivum beta-expansin 2 (EXPB2) mRNA, complete cds
Length = 1068
Score = 52.0 bits (26), Expect = 6e-005
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 536 agcacggccaggtagttcgggttggagccc 565
||||||||||||||||| ||||||||||||
Sbjct: 577 agcacggccaggtagttggggttggagccc 548
>gb|AY533103.1| Triticum aestivum beta-expansin 1 (EXPB1) gene, complete cds
Length = 1149
Score = 52.0 bits (26), Expect = 6e-005
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 536 agcacggccaggtagttcgggttggagccc 565
||||||||||||||||| ||||||||||||
Sbjct: 891 agcacggccaggtagttggggttggagccc 862
>gb|AY533104.1| Triticum aestivum beta-expansin 2 (EXPB2) gene, complete cds
Length = 1216
Score = 52.0 bits (26), Expect = 6e-005
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 536 agcacggccaggtagttcgggttggagccc 565
||||||||||||||||| ||||||||||||
Sbjct: 812 agcacggccaggtagttggggttggagccc 783
>gb|BE420061.1|BE420061 WWS02.F9R000101 ITEC WWS Wheat Scutellum Library Triticum aestivum
cDNA clone WWS02.F9, mRNA sequence
Length = 538
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 521 tcctcgtactcgatcagcacggccaggta 549
|||||||||||||||||||| ||||||||
Sbjct: 47 tcctcgtactcgatcagcaccgccaggta 19
>gb|BE426055.1|BE426055 WHE0327_C05_F09ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0327_C05_F09, mRNA
sequence
Length = 556
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 521 tcctcgtactcgatcagcacggccaggta 549
|||||||||||||||||||| ||||||||
Sbjct: 460 tcctcgtactcgatcagcaccgccaggta 432
>gb|BE496838.1|BE496838 WHE0761_F08_L15ZS Wheat heat-stressed seedling cDNA library
Triticum aestivum cDNA clone WHE0761_F08_L15, mRNA
sequence
Length = 475
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 521 tcctcgtactcgatcagcacggccaggta 549
|||||||||||||||||||| ||||||||
Sbjct: 176 tcctcgtactcgatcagcaccgccaggta 148
>gb|BE516112.1|BE516112 WHE612_B11_D22ZA Wheat ABA-treated embryo cDNA library Triticum
aestivum cDNA clone WHE612_B11_D22, mRNA sequence
Length = 438
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 521 tcctcgtactcgatcagcacggccaggta 549
|||||||||||||||||||| ||||||||
Sbjct: 229 tcctcgtactcgatcagcaccgccaggta 201
>gb|BF200271.1|BF200271 WHE2254_H10_P20ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE2254_H10_P20, mRNA
sequence
Length = 600
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 521 tcctcgtactcgatcagcacggccaggta 549
|||||||||||||||||||| ||||||||
Sbjct: 287 tcctcgtactcgatcagcaccgccaggta 259
>gb|BG607190.1|BG607190 WHE2472_E02_I04ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2472_E02_I04,
mRNA sequence
Length = 610
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 521 tcctcgtactcgatcagcacggccaggta 549
|||||||||||||||||||| ||||||||
Sbjct: 266 tcctcgtactcgatcagcaccgccaggta 238
>gb|BJ282673.1|BJ282673 BJ282673 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr11l14 3', mRNA sequence
Length = 643
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 521 tcctcgtactcgatcagcacggccaggta 549
|||||||||||||||||||| ||||||||
Sbjct: 532 tcctcgtactcgatcagcaccgccaggta 560
>gb|BQ743343.1|BQ743343 WHE4102_H05_O10ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4102_H05_O10, mRNA sequence
Length = 699
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 521 tcctcgtactcgatcagcacggccaggta 549
|||||||||||||||||||| ||||||||
Sbjct: 295 tcctcgtactcgatcagcaccgccaggta 267
>gb|BQ752757.1|BQ752757 WHE4118_G09_M18ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4118_G09_M18, mRNA sequence
Length = 689
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 521 tcctcgtactcgatcagcacggccaggta 549
|||||||||||||||||||| ||||||||
Sbjct: 656 tcctcgtactcgatcagcaccgccaggta 628
>gb|BU100291.1|BU100291 WHE3351_E09_I17ZS Chinese Spring aluminum-stressed root tip cDNA
library Triticum aestivum cDNA clone WHE3351_E09_I17,
mRNA sequence
Length = 760
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 521 tcctcgtactcgatcagcacggccaggta 549
|||||||||||||||||||| ||||||||
Sbjct: 653 tcctcgtactcgatcagcaccgccaggta 625
>gb|CA602800.1|CA602800 wr1.pk0008.d6 wr1 Triticum aestivum cDNA clone wr1.pk0008.d6 5'
end, mRNA sequence
Length = 520
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 521 tcctcgtactcgatcagcacggccaggta 549
|||||||||||||||||||| ||||||||
Sbjct: 187 tcctcgtactcgatcagcaccgccaggta 159
>gb|CA618328.1|CA618328 wl1n.pk0032.f12 wl1n Triticum aestivum cDNA clone wl1n.pk0032.f12
5' end, mRNA sequence
Length = 533
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 521 tcctcgtactcgatcagcacggccaggta 549
|||||||||||||||||||| ||||||||
Sbjct: 63 tcctcgtactcgatcagcaccgccaggta 35
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 188,589
Number of Sequences: 636343
Number of extensions: 188589
Number of successful extensions: 45053
Number of sequences better than 0.5: 95
Number of HSP's better than 0.5 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44830
Number of HSP's gapped (non-prelim): 223
length of query: 744
length of database: 367,240,239
effective HSP length: 19
effective length of query: 725
effective length of database: 355,149,722
effective search space: 257483548450
effective search space used: 257483548450
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)