BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2591194.2.1
(591 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ230965.1|BJ230965 BJ230965 Y. Ogihara unpublished cDNA... 311 3e-083
gb|BJ266439.1|BJ266439 BJ266439 Y. Ogihara unpublished cDNA... 311 3e-083
gb|CD452852.1|CD452852 WHE1134_B12_C24ZT CS wheat etiolated... 305 2e-081
gb|BF292987.1|BF292987 WHE2163_G01_M01ZS Triticum turgidum ... 256 2e-066
gb|BQ169210.1|BQ169210 WHE2163_G01_M01ZT Triticum turgidum ... 240 9e-062
gb|CD937950.1|CD937950 OV.108J10F010206 OV Triticum aestivu... 240 9e-062
gb|CK195699.1|CK195699 FGAS004142 Triticum aestivum FGAS: L... 236 1e-060
gb|CK217203.1|CK217203 FGAS029204 Triticum aestivum FGAS: L... 224 5e-057
gb|BJ230741.1|BJ230741 BJ230741 Y. Ogihara unpublished cDNA... 153 2e-035
gb|BQ160919.1|BQ160919 WHE0326_F06_K12ZY Wheat unstressed s... 139 2e-031
gb|CD895661.1|CD895661 G174.100I05R011119 G174 Triticum aes... 123 1e-026
gb|BQ242523.1|BQ242523 TaE15027C12F TaE15 Triticum aestivum... 78 8e-013
gb|CD890701.1|CD890701 G118.115D22F010719 G118 Triticum aes... 78 8e-013
gb|CD933859.1|CD933859 GR45.122D21F010721 GR45 Triticum aes... 74 1e-011
gb|BJ322623.1|BJ322623 BJ322623 Y. Ogihara unpublished cDNA... 64 1e-008
gb|CA640817.1|CA640817 wre1n.pk0020.f8 wre1n Triticum aesti... 64 1e-008
gb|CK200779.1|CK200779 FGAS009296 Triticum aestivum FGAS: L... 64 1e-008
gb|BJ255233.1|BJ255233 BJ255233 Y. Ogihara unpublished cDNA... 56 3e-006
gb|CV764972.1|CV764972 FGAS059357 Triticum aestivum FGAS: L... 46 0.003
gb|BE404042.1|BE404042 WHE0410_H01_H01ZS Wheat etiolated se... 44 0.011
gb|BJ211098.1|BJ211098 BJ211098 Y. Ogihara unpublished cDNA... 44 0.011
gb|BJ218464.1|BJ218464 BJ218464 Y. Ogihara unpublished cDNA... 44 0.011
gb|CK168826.1|CK168826 FGAS043417 Triticum aestivum FGAS: T... 44 0.011
gb|CK169373.1|CK169373 FGAS044001 Triticum aestivum FGAS: T... 44 0.011
gb|CK169521.1|CK169521 FGAS044153 Triticum aestivum FGAS: T... 44 0.011
gb|CK169653.1|CK169653 FGAS044292 Triticum aestivum FGAS: T... 44 0.011
gb|CK170437.1|CK170437 FGAS045331 Triticum aestivum FGAS: T... 44 0.011
gb|CK170502.1|CK170502 FGAS045426 Triticum aestivum FGAS: T... 44 0.011
>gb|BJ230965.1|BJ230965 BJ230965 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl24o11 3', mRNA sequence
Length = 558
Score = 311 bits (157), Expect = 3e-083
Identities = 214/233 (91%)
Strand = Plus / Plus
Query: 341 cttcagagaggcctggtccggcgtccagaggcccggccgcagagcagcgcgttcttgggg 400
|||||||| |||||||||||||| || ||||| ||||||||||| |||||||||||||||
Sbjct: 158 cttcagagcggcctggtccggcggccggaggcgcggccgcagaggagcgcgttcttgggg 217
Query: 401 atcgggttctcgtcccgccacgagttcgccggcgagtagacgcggaggtagaactgctgg 460
|| ||||||||||||||||||||||| |||||||||||||| || |||||||||||||||
Sbjct: 218 atggggttctcgtcccgccacgagttggccggcgagtagacccgcaggtagaactgctgg 277
Query: 461 ccgaggtactgcctggcccagctctcggacctcacgttccacatccccacgttgtccagc 520
|| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 278 cccaggtactgcctgccccagctctccgacctcacgttccacatccccacgttgtccagc 337
Query: 521 ggcatgtagatagccgtccatgactgagggtacacctgcaatgtgtaccgagc 573
||||||||||| |||||||| | ||| |||||||||||||||||||||||
Sbjct: 338 ggcatgtagatcgccgtccacgcaccaggatacacctgcaatgtgtaccgagc 390
>gb|BJ266439.1|BJ266439 BJ266439 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh26k22 3', mRNA sequence
Length = 680
Score = 311 bits (157), Expect = 3e-083
Identities = 214/233 (91%)
Strand = Plus / Plus
Query: 341 cttcagagaggcctggtccggcgtccagaggcccggccgcagagcagcgcgttcttgggg 400
|||||||| |||||||||||||| || ||||| ||||||||||| |||||||||||||||
Sbjct: 218 cttcagagcggcctggtccggcggccggaggcgcggccgcagaggagcgcgttcttgggg 277
Query: 401 atcgggttctcgtcccgccacgagttcgccggcgagtagacgcggaggtagaactgctgg 460
|| ||||||||||||||||||||||| |||||||||||||| || |||||||||||||||
Sbjct: 278 atggggttctcgtcccgccacgagttggccggcgagtagacccgcaggtagaactgctgg 337
Query: 461 ccgaggtactgcctggcccagctctcggacctcacgttccacatccccacgttgtccagc 520
|| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 338 cccaggtactgcctgccccagctctccgacctcacgttccacatccccacgttgtccagc 397
Query: 521 ggcatgtagatagccgtccatgactgagggtacacctgcaatgtgtaccgagc 573
||||||||||| |||||||| | ||| |||||||||||||||||||||||
Sbjct: 398 ggcatgtagatcgccgtccacgcaccaggatacacctgcaatgtgtaccgagc 450
>gb|CD452852.1|CD452852 WHE1134_B12_C24ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1134_B12_C24,
mRNA sequence
Length = 766
Score = 305 bits (154), Expect = 2e-081
Identities = 211/230 (91%)
Strand = Plus / Plus
Query: 341 cttcagagaggcctggtccggcgtccagaggcccggccgcagagcagcgcgttcttgggg 400
|||||||| |||||||||||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 317 cttcagagcggcctggtccggcggccggaggcgcggccgcagagcagcgcgttcttgggg 376
Query: 401 atcgggttctcgtcccgccacgagttcgccggcgagtagacgcggaggtagaactgctgg 460
|| ||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 377 atggggttctcgtcccgccacgagttggccggcgagtacacccggaggtagaactgctgg 436
Query: 461 ccgaggtactgcctggcccagctctcggacctcacgttccacatccccacgttgtccagc 520
|| |||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 437 cccaggtactgcctgccccagctctccgaccgcacgttccacatccccacgttgtccagc 496
Query: 521 ggcatgtagatagccgtccatgactgagggtacacctgcaatgtgtaccg 570
||||||||||| |||||||| | | ||| ||||||||||| ||||||||
Sbjct: 497 ggcatgtagatcgccgtccacgccccaggatacacctgcaacgtgtaccg 546
>gb|BF292987.1|BF292987 WHE2163_G01_M01ZS Triticum turgidum L. var. durum (durum wheat)
whole plant cDNA library Triticum turgidum cDNA clone
WHE2163_G01_M01, mRNA sequence
Length = 613
Score = 256 bits (129), Expect = 2e-066
Identities = 204/229 (89%)
Strand = Plus / Minus
Query: 342 ttcagagaggcctggtccggcgtccagaggcccggccgcagagcagcgcgttcttgggga 401
||||||| |||||||||||||| || ||||| |||||||||||||| |||||||||||||
Sbjct: 524 ttcagagcggcctggtccggcggccggaggcgcggccgcagagcagtgcgttcttgggga 465
Query: 402 tcgggttctcgtcccgccacgagttcgccggcgagtagacgcggaggtagaactgctggc 461
| ||||||||||| ||||||||||||||||||||||| || || ||||||||||||||||
Sbjct: 464 tggggttctcgtcgcgccacgagttcgccggcgagtatacccgcaggtagaactgctggc 405
Query: 462 cgaggtactgcctggcccagctctcggacctcacgttccacatccccacgttgtccagcg 521
| |||||||||||| |||||||||| |||| |||||||||||||||||||||||||| |
Sbjct: 404 ccaggtactgcctgccccagctctccgaccgaacgttccacatccccacgttgtccagtg 345
Query: 522 gcatgtagatagccgtccatgactgagggtacacctgcaatgtgtaccg 570
||||||| || || ||||| | | ||| ||||||||||| ||||||||
Sbjct: 344 gcatgtatatcgctgtccacgccccaggatacacctgcaacgtgtaccg 296
>gb|BQ169210.1|BQ169210 WHE2163_G01_M01ZT Triticum turgidum L. var. durum (durum wheat)
whole plant cDNA library Triticum turgidum cDNA clone
WHE2163_G01_M01, mRNA sequence
Length = 560
Score = 240 bits (121), Expect = 9e-062
Identities = 202/229 (88%)
Strand = Plus / Plus
Query: 342 ttcagagaggcctggtccggcgtccagaggcccggccgcagagcagcgcgttcttgggga 401
||||||| |||||||||||||| || ||||| |||||||||||||| |||||||||||||
Sbjct: 254 ttcagagcggcctggtccggcggccggaggcgcggccgcagagcagtgcgttcttgggga 313
Query: 402 tcgggttctcgtcccgccacgagttcgccggcgagtagacgcggaggtagaactgctggc 461
| ||||||||||| |||||| ||||||||||||||| || || ||||||||||||||||
Sbjct: 314 tggggttctcgtcgcgccaccggttcgccggcgagtatacccgcaggtagaactgctggc 373
Query: 462 cgaggtactgcctggcccagctctcggacctcacgttccacatccccacgttgtccagcg 521
| |||||||||||| |||||||||| |||| |||||||||||||||||||||||||| |
Sbjct: 374 ccaggtactgcctgccccagctctccgaccgaacgttccacatccccacgttgtccagtg 433
Query: 522 gcatgtagatagccgtccatgactgagggtacacctgcaatgtgtaccg 570
||||||| || || ||||| | | ||| ||||||||||| ||||||||
Sbjct: 434 gcatgtatatcgctgtccacgccccaggatacacctgcaacgtgtaccg 482
>gb|CD937950.1|CD937950 OV.108J10F010206 OV Triticum aestivum cDNA clone OV108J10, mRNA
sequence
Length = 316
Score = 240 bits (121), Expect = 9e-062
Identities = 172/189 (91%)
Strand = Plus / Minus
Query: 382 gagcagcgcgttcttggggatcgggttctcgtcccgccacgagttcgccggcgagtagac 441
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||
Sbjct: 316 gagcagcgcgttcttggggatggggttctcgtcccgccacgagttggccggcgagtacac 257
Query: 442 gcggaggtagaactgctggccgaggtactgcctggcccagctctcggacctcacgttcca 501
|||||||||||||||||||| |||||||||||| |||||||||| |||| |||||||||
Sbjct: 256 ccggaggtagaactgctggcccaggtactgcctgccccagctctccgaccgcacgttcca 197
Query: 502 catccccacgttgtccagcggcatgtagatagccgtccatgactgagggtacacctgcaa 561
|||||||||||||| || |||||||||||| |||||||| | | ||| |||||||||||
Sbjct: 196 catccccacgttgtacaacggcatgtagatcgccgtccacgccccaggatacacctgcaa 137
Query: 562 tgtgtaccg 570
||||||||
Sbjct: 136 cgtgtaccg 128
>gb|CK195699.1|CK195699 FGAS004142 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 852
Score = 236 bits (119), Expect = 1e-060
Identities = 170/187 (90%)
Strand = Plus / Plus
Query: 342 ttcagagaggcctggtccggcgtccagaggcccggccgcagagcagcgcgttcttgggga 401
||||||| |||||||||||||| || ||||| |||||||||||||| |||||||||||||
Sbjct: 382 ttcagagcggcctggtccggcggccggaggcgcggccgcagagcagtgcgttcttgggga 441
Query: 402 tcgggttctcgtcccgccacgagttcgccggcgagtagacgcggaggtagaactgctggc 461
| ||||||||||| ||||||||||||||||||||||| || | ||||||||||||||||
Sbjct: 442 tggggttctcgtcgcgccacgagttcgccggcgagtataccctcaggtagaactgctggc 501
Query: 462 cgaggtactgcctggcccagctctcggacctcacgttccacatccccacgttgtccagcg 521
| |||||||||||| |||||||||| |||| |||||||||||||||||||||||||| |
Sbjct: 502 ccaggtactgcctgccccagctctccgaccgaacgttccacatccccacgttgtccagtg 561
Query: 522 gcatgta 528
|||||||
Sbjct: 562 gcatgta 568
>gb|CK217203.1|CK217203 FGAS029204 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1094
Score = 224 bits (113), Expect = 5e-057
Identities = 200/229 (87%)
Strand = Plus / Plus
Query: 342 ttcagagaggcctggtccggcgtccagaggcccggccgcagagcagcgcgttcttgggga 401
||||||| |||||||||||||| || ||||| || |||||||||| |||||||||||||
Sbjct: 257 ttcagagcggcctggtccggcggccggaggcgcgttcgcagagcagtgcgttcttgggga 316
Query: 402 tcgggttctcgtcccgccacgagttcgccggcgagtagacgcggaggtagaactgctggc 461
| ||||||||||| ||||||||||||||||||||||| || | ||||||||||||||||
Sbjct: 317 tggggttctcgtcgcgccacgagttcgccggcgagtataccctcaggtagaactgctggc 376
Query: 462 cgaggtactgcctggcccagctctcggacctcacgttccacatccccacgttgtccagcg 521
| |||||||| || ||||||||||| |||| |||||||||||||||||||||||||| |
Sbjct: 377 ccaggtactgactagcccagctctccgaccgaacgttccacatccccacgttgtccagtg 436
Query: 522 gcatgtagatagccgtccatgactgagggtacacctgcaatgtgtaccg 570
||||||| || || ||||| | | ||| ||||||||||| ||||||||
Sbjct: 437 gcatgtatatcgctgtccacgccccaggatacacctgcaacgtgtaccg 485
>gb|BJ230741.1|BJ230741 BJ230741 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl24b08 3', mRNA sequence
Length = 669
Score = 153 bits (77), Expect = 2e-035
Identities = 146/169 (86%)
Strand = Plus / Plus
Query: 374 cggccgcagagcagcgcgttcttggggatcgggttctcgtcccgccacgagttcgccggc 433
|||||||| || || |||||||||||||||||| |||||| |||||||| | | ||||
Sbjct: 66 cggccgcacaggagggcgttcttggggatcgggaactcgtcgcgccacgacgtggacggc 125
Query: 434 gagtagacgcggaggtagaactgctggccgaggtactgcctggcccagctctcggacctc 493
| |||||||||||||||||||||| || |||||||||||||||||| |||| || |||
Sbjct: 126 gtccagacgcggaggtagaactgctgtcccaggtactgcctggcccaggtctccgatctc 185
Query: 494 acgttccacatccccacgttgtccagcggcatgtagatagccgtccatg 542
||||||||||| ||||||||||| || ||||||||||| || |||||||
Sbjct: 186 acgttccacatgcccacgttgtcaaggggcatgtagattgcagtccatg 234
>gb|BQ160919.1|BQ160919 WHE0326_F06_K12ZY Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0326_F06_K12, mRNA
sequence
Length = 464
Score = 139 bits (70), Expect = 2e-031
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 374 cggccgcagagcagcgcgttcttggggatcgggttctcgtcccgccacgagttcgccggc 433
|||||||| || || |||||||||||||||||| |||||| |||||||| | | ||||
Sbjct: 311 cggccgcacaggagggcgttcttggggatcgggaactcgtcgcgccacgacgtggacggc 370
Query: 434 gagtagacgcggaggtagaactgctggccgaggtactgcctggcccagctctcggacctc 493
| |||||||||||||||||||||| || |||||||||||||||||| |||| || |||
Sbjct: 371 gtccagacgcggaggtagaactgctgtcccaggtactgcctggcccaggtctccgatctc 430
Query: 494 acgttccacatccccacgttgtccagcggcatgt 527
||||||||||| ||||||||||| || |||||||
Sbjct: 431 acgttccacatgcccacgttgtcaaggggcatgt 464
>gb|CD895661.1|CD895661 G174.100I05R011119 G174 Triticum aestivum cDNA clone G174100I05,
mRNA sequence
Length = 462
Score = 123 bits (62), Expect = 1e-026
Identities = 134/158 (84%)
Strand = Plus / Plus
Query: 374 cggccgcagagcagcgcgttcttggggatcgggttctcgtcccgccacgagttcgccggc 433
|||||||| || || |||||||||||||||||| |||||| |||||||| ||| ||||
Sbjct: 304 cggccgcacaggagggcgttcttggggatcgggaactcgtcgcgccacgacgtcgacggc 363
Query: 434 gagtagacgcggaggtagaactgctggccgaggtactgcctggcccagctctcggacctc 493
| |||||||||||||||||||||| || |||||| ||||||||||| |||| || |
Sbjct: 364 gtccagacgcggaggtagaactgctgccccaggtacagcctggcccaggtctccgatcga 423
Query: 494 acgttccacatccccacgttgtccagcggcatgtagat 531
||||||||||| ||||||| ||| || |||||||||||
Sbjct: 424 acgttccacatgcccacgtggtcaaggggcatgtagat 461
>gb|BQ242523.1|BQ242523 TaE15027C12F TaE15 Triticum aestivum cDNA clone TaE15027C12F, mRNA
sequence
Length = 513
Score = 77.8 bits (39), Expect = 8e-013
Identities = 93/111 (83%)
Strand = Plus / Plus
Query: 430 cggcgagtagacgcggaggtagaactgctggccgaggtactgcctggcccagctctcgga 489
||||| ||| || |||||||||||||||||||| |||||| | |||| ||| ||
Sbjct: 50 cggcgtgtacacccggaggtagaactgctggcccaggtacctgcgcacccaatcctccga 109
Query: 490 cctcacgttccacatccccacgttgtccagcggcatgtagatagccgtcca 540
|||||||||||||||||||||||||||||||| ||| |||| ||||||||
Sbjct: 110 cctcacgttccacatccccacgttgtccagcgcgatgaagatcgccgtcca 160
>gb|CD890701.1|CD890701 G118.115D22F010719 G118 Triticum aestivum cDNA clone G118115D22,
mRNA sequence
Length = 498
Score = 77.8 bits (39), Expect = 8e-013
Identities = 93/111 (83%)
Strand = Plus / Minus
Query: 430 cggcgagtagacgcggaggtagaactgctggccgaggtactgcctggcccagctctcgga 489
||||| ||| || |||||||||||||||||||| |||||| | |||| ||| ||
Sbjct: 447 cggcgtgtacacccggaggtagaactgctggcccaggtacctgcgcacccaatcctccga 388
Query: 490 cctcacgttccacatccccacgttgtccagcggcatgtagatagccgtcca 540
|||||||||||||||||||||||||||||||| ||| |||| ||||||||
Sbjct: 387 cctcacgttccacatccccacgttgtccagcgcgatgaagatcgccgtcca 337
>gb|CD933859.1|CD933859 GR45.122D21F010721 GR45 Triticum aestivum cDNA clone GR45122D21,
mRNA sequence
Length = 545
Score = 73.8 bits (37), Expect = 1e-011
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 488 gacctcacgttccacatccccacgttgtccagcggcatgtagatagccgtcca 540
|||||||||||||||||||||||||||||||||| ||| |||| ||||||||
Sbjct: 491 gacctcacgttccacatccccacgttgtccagcgcgatgaagatcgccgtcca 439
>gb|BJ322623.1|BJ322623 BJ322623 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf26e02 3', mRNA sequence
Length = 626
Score = 63.9 bits (32), Expect = 1e-008
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 454 ctgctggccgaggtactgcctggcccagctctcggacctcacgttccacatccccacgtt 513
|||||||||||||||||||| | ||||| || | ||||||| |||||||||||| |||
Sbjct: 311 ctgctggccgaggtactgccggtcccagttcgccgacctcaggttccacatcccttggtt 370
Query: 514 gtccagcg 521
||||||||
Sbjct: 371 gtccagcg 378
>gb|CA640817.1|CA640817 wre1n.pk0020.f8 wre1n Triticum aestivum cDNA clone wre1n.pk0020.f8
5' end, mRNA sequence
Length = 431
Score = 63.9 bits (32), Expect = 1e-008
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 454 ctgctggccgaggtactgcctggcccagctctcggacctcacgttccacatccccacgtt 513
|||||||||||||||||||| | ||||| || | ||||||| |||||||||||| |||
Sbjct: 156 ctgctggccgaggtactgccggtcccagttcgccgacctcaggttccacatcccttggtt 97
Query: 514 gtccagcg 521
||||||||
Sbjct: 96 gtccagcg 89
>gb|CK200779.1|CK200779 FGAS009296 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 847
Score = 63.9 bits (32), Expect = 1e-008
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 454 ctgctggccgaggtactgcctggcccagctctcggacctcacgttccacatccccacgtt 513
|||||||||||||||||||| | ||||| || | ||||||| |||||||||||| |||
Sbjct: 554 ctgctggccgaggtactgccggtcccagttcgccgacctcaggttccacatcccttggtt 613
Query: 514 gtccagcg 521
||||||||
Sbjct: 614 gtccagcg 621
>gb|BJ255233.1|BJ255233 BJ255233 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf8o07 3', mRNA sequence
Length = 614
Score = 56.0 bits (28), Expect = 3e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 454 ctgctggccgaggtactgcctggcccagctctcggacctcacgttccacatccccacgtt 513
|||||||||||||||||||| | ||||| | | ||||||| |||||||||||| |||
Sbjct: 244 ctgctggccgaggtactgccggtcccagttggccgacctcaggttccacatcccttggtt 303
Query: 514 gtccagcg 521
||||||||
Sbjct: 304 gtccagcg 311
>gb|CV764972.1|CV764972 FGAS059357 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 852
Score = 46.1 bits (23), Expect = 0.003
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 342 ttcagagaggcctggtccggcgtccagaggcccggccgc 380
||||||| |||||||||||||| || ||||| |||||||
Sbjct: 354 ttcagagcggcctggtccggcggccggaggcgcggccgc 392
>gb|BE404042.1|BE404042 WHE0410_H01_H01ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0410_H01_H01, mRNA
sequence
Length = 278
Score = 44.1 bits (22), Expect = 0.011
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 488 gacctcacgttccacatccccacgttgtccagcg 521
|||| ||||||||| | |||||||||||||||||
Sbjct: 121 gaccgcacgttccagaaccccacgttgtccagcg 88
>gb|BJ211098.1|BJ211098 BJ211098 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh37n09 5', mRNA sequence
Length = 640
Score = 44.1 bits (22), Expect = 0.011
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 488 gacctcacgttccacatccccacgttgtccagcg 521
|||| ||||||||| | |||||||||||||||||
Sbjct: 149 gaccgcacgttccagaaccccacgttgtccagcg 116
>gb|BJ218464.1|BJ218464 BJ218464 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh37n09 3', mRNA sequence
Length = 559
Score = 44.1 bits (22), Expect = 0.011
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 488 gacctcacgttccacatccccacgttgtccagcg 521
|||| ||||||||| | |||||||||||||||||
Sbjct: 426 gaccgcacgttccagaaccccacgttgtccagcg 459
>gb|CK168826.1|CK168826 FGAS043417 Triticum aestivum FGAS: TaLt6 Triticum aestivum cDNA,
mRNA sequence
Length = 933
Score = 44.1 bits (22), Expect = 0.011
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 488 gacctcacgttccacatccccacgttgtccagcg 521
|||| ||||||||| | |||||||||||||||||
Sbjct: 633 gaccgcacgttccagaaccccacgttgtccagcg 666
>gb|CK169373.1|CK169373 FGAS044001 Triticum aestivum FGAS: TaLt6 Triticum aestivum cDNA,
mRNA sequence
Length = 883
Score = 44.1 bits (22), Expect = 0.011
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 488 gacctcacgttccacatccccacgttgtccagcg 521
|||| ||||||||| | |||||||||||||||||
Sbjct: 636 gaccgcacgttccagaaccccacgttgtccagcg 669
>gb|CK169521.1|CK169521 FGAS044153 Triticum aestivum FGAS: TaLt6 Triticum aestivum cDNA,
mRNA sequence
Length = 906
Score = 44.1 bits (22), Expect = 0.011
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 488 gacctcacgttccacatccccacgttgtccagcg 521
|||| ||||||||| | |||||||||||||||||
Sbjct: 634 gaccgcacgttccagaaccccacgttgtccagcg 667
>gb|CK169653.1|CK169653 FGAS044292 Triticum aestivum FGAS: TaLt6 Triticum aestivum cDNA,
mRNA sequence
Length = 889
Score = 44.1 bits (22), Expect = 0.011
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 488 gacctcacgttccacatccccacgttgtccagcg 521
|||| ||||||||| | |||||||||||||||||
Sbjct: 632 gaccgcacgttccagaaccccacgttgtccagcg 665
>gb|CK170437.1|CK170437 FGAS045331 Triticum aestivum FGAS: TaLt6 Triticum aestivum cDNA,
mRNA sequence
Length = 1193
Score = 44.1 bits (22), Expect = 0.011
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 488 gacctcacgttccacatccccacgttgtccagcg 521
|||| ||||||||| | |||||||||||||||||
Sbjct: 570 gaccgcacgttccagaaccccacgttgtccagcg 603
>gb|CK170502.1|CK170502 FGAS045426 Triticum aestivum FGAS: TaLt6 Triticum aestivum cDNA,
mRNA sequence
Length = 1188
Score = 44.1 bits (22), Expect = 0.011
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 488 gacctcacgttccacatccccacgttgtccagcg 521
|||| ||||||||| | |||||||||||||||||
Sbjct: 142 gaccgcacgttccagaaccccacgttgtccagcg 109
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 124,180
Number of Sequences: 636343
Number of extensions: 124180
Number of successful extensions: 35124
Number of sequences better than 0.5: 28
Number of HSP's better than 0.5 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35076
Number of HSP's gapped (non-prelim): 44
length of query: 591
length of database: 367,240,239
effective HSP length: 19
effective length of query: 572
effective length of database: 355,149,722
effective search space: 203145640984
effective search space used: 203145640984
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)