BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2591131.2.1
(596 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD454565.1|CD454565 WHE2327_D04_H07ZT CS wheat pre-anthe... 285 2e-075
gb|CA605669.1|CA605669 wr1.pk0056.b2 wr1 Triticum aestivum ... 147 1e-033
gb|BE400448.1|BE400448 AWB003.F12F000328 ITEC AWB Wheat Mei... 129 2e-028
gb|BG605102.1|BG605102 WHE2327_D04_H07ZS Wheat pre-anthesis... 92 5e-017
gb|CD452968.1|CD452968 WHE1141_G10_M19ZT CS wheat etiolated... 90 2e-016
gb|BE446052.1|BE446052 WHE1141_G10_M19ZS Wheat etiolated se... 74 1e-011
gb|BE446405.1|BE446405 WHE1457_G07_N13ZS Wheat etiolated se... 60 2e-007
gb|BF201369.1|BF201369 WHE0990_H02_P04ZS Wheat pre-anthesis... 48 7e-004
gb|BJ214280.1|BJ214280 BJ214280 Y. Ogihara unpublished cDNA... 48 7e-004
gb|BJ221768.1|BJ221768 BJ221768 Y. Ogihara unpublished cDNA... 48 7e-004
gb|BJ280310.1|BJ280310 BJ280310 Y. Ogihara unpublished cDNA... 48 7e-004
gb|BJ285296.1|BJ285296 BJ285296 Y. Ogihara unpublished cDNA... 48 7e-004
gb|BJ285550.1|BJ285550 BJ285550 Y. Ogihara unpublished cDNA... 48 7e-004
gb|BQ169431.1|BQ169431 WHE1771_F09_K17ZT Wheat pre-anthesis... 48 7e-004
gb|BQ839374.1|BQ839374 WHE4165_D06_H11ZS Wheat CS whole pla... 48 7e-004
gb|CA714338.1|CA714338 wdk3c.pk018.l12 wdk3c Triticum aesti... 48 7e-004
gb|CD454188.1|CD454188 WHE0990_H02_P04ZT CS wheat pre-anthe... 48 7e-004
gb|CK210097.1|CK210097 FGAS021888 Triticum aestivum FGAS: L... 48 7e-004
gb|DR737942.1|DR737942 FGAS083159 Triticum aestivum FGAS: L... 48 7e-004
gb|DR739882.1|DR739882 FGAS000149 Triticum aestivum FGAS: L... 48 7e-004
gb|AY589584.1| Triticum aestivum alpha-expansin EXPA2 mRNA,... 48 7e-004
gb|BJ270401.1|BJ270401 BJ270401 Y. Ogihara unpublished cDNA... 44 0.011
gb|BJ270964.1|BJ270964 BJ270964 Y. Ogihara unpublished cDNA... 44 0.011
gb|CD886737.1|CD886737 G118.103C04F010605 G118 Triticum aes... 44 0.011
gb|CD913625.1|CD913625 G550.118I10R010921 G550 Triticum aes... 44 0.011
gb|CD938849.1|CD938849 OV.111D22F010309 OV Triticum aestivu... 44 0.011
gb|AY692477.1| Triticum aestivum alpha-expansin EXPA3 mRNA,... 44 0.011
gb|AY543529.1| Triticum aestivum expansin EXPA3 mRNA, compl... 44 0.011
gb|AY543535.1| Triticum aestivum expansin EXPA9 mRNA, compl... 44 0.011
gb|BE446142.1|BE446142 WHE1142_G10_M20ZS Wheat etiolated se... 42 0.043
gb|CA713582.1|CA713582 wdk3c.pk020.h2 wdk3c Triticum aestiv... 42 0.043
gb|CA733228.1|CA733228 wlp1c.pk008.o19 wlp1c Triticum aesti... 42 0.043
gb|CD862786.1|CD862786 AZO1.104J16F010129 AZO1 Triticum aes... 40 0.17
>gb|CD454565.1|CD454565 WHE2327_D04_H07ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2327_D04_H07, mRNA sequence
Length = 592
Score = 285 bits (144), Expect = 2e-075
Identities = 270/312 (86%)
Strand = Plus / Plus
Query: 180 ctactcggcgaactgcttgccctcgaacgtctgcgcgaacatccagtccgccggcgccac 239
||||||| ||||||||||||| | ||||| ||||| ||||||||||||| ||||| ||
Sbjct: 210 ctactcgacgaactgcttgcctgcaaacgtttgcgcaaacatccagtccgaaggcgcgac 269
Query: 240 gctgtaggcggtgaccgtcctgcccctcccgccggtgacctcgaacgacagcggctgggc 299
| | || ||||| |||||| ||| | || ||||||||||||||||||||||||||| |
Sbjct: 270 gttatacatggtgatcgtcctcccctttcctccggtgacctcgaacgacagcggctggcc 329
Query: 300 gcggaggtcggcgtcgcactgccagttctggccccagttccgccccatcgggatccaccc 359
|||||||| |||||||||||||||||||| |||||||||| ||||||||| ||||||||
Sbjct: 330 tcggaggtccgcgtcgcactgccagttctgcccccagttcctccccatcggtatccaccc 389
Query: 360 cgtcctcgagcccttcaccttcacggccgccacctcgccgtccgccgccacgttggtgat 419
|||||||| ||||||||||||||||| | ||||||||||| || ||||||||||||||
Sbjct: 390 ggtcctcgaccccttcaccttcacggcgtcgacctcgccgtcggctgccacgttggtgat 449
Query: 420 gagcacctgcaggaagtgggcgctaccggagatggtgaaccgcatgccgcccgccctgtc 479
|||||||| ||||||| || || |||| |||||||||||| |||||||| ||||||||
Sbjct: 450 cagcacctggaggaagttggggccgccggtgatggtgaaccgaatgccgccggccctgtc 509
Query: 480 gcagctcaccct 491
|||||||||||
Sbjct: 510 acagctcaccct 521
>gb|CA605669.1|CA605669 wr1.pk0056.b2 wr1 Triticum aestivum cDNA clone wr1.pk0056.b2 5'
end, mRNA sequence
Length = 267
Score = 147 bits (74), Expect = 1e-033
Identities = 152/178 (85%)
Strand = Plus / Minus
Query: 370 cccttcaccttcacggccgccacctcgccgtccgccgccacgttggtgatgagcacctgc 429
|||||||||||||| || | ||||||||||| || |||||||||||||| ||||||||
Sbjct: 178 cccttcaccttcacagcgtcgacctcgccgtcggctgccacgttggtgatcagcacctgg 119
Query: 430 aggaagtgggcgctaccggagatggtgaaccgcatgccgcccgccctgtcgcagctcacc 489
||||||| || || |||| ||| |||||||| || ||||| |||||||| |||||||||
Sbjct: 118 aggaagttggggccgccggtgatcgtgaaccgaattccgccggccctgtcacagctcacc 59
Query: 490 ctccggaactgcaccggcacgatgccggccttggccttggcgacgcggaggaacgcgg 547
|| |||||||||||| | || ||| | ||||||||||||||||| |||||||| ||||
Sbjct: 58 cttcggaactgcacctggacaatgtcagccttggccttggcgacccggaggaaggcgg 1
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 308 cggcgtcgcactgccagttctggcccc 334
||||||||||||||||||||| |||||
Sbjct: 244 cggcgtcgcactgccagttcttgcccc 218
>gb|BE400448.1|BE400448 AWB003.F12F000328 ITEC AWB Wheat Meiotic Stage Library Triticum
aestivum cDNA clone AWB003.F12, mRNA sequence
Length = 469
Score = 129 bits (65), Expect = 2e-028
Identities = 122/141 (86%)
Strand = Plus / Minus
Query: 454 gtgaaccgcatgccgcccgccctgtcgcagctcaccctccggaactgcaccggcacgatg 513
|||||||| || ||||| |||||||| ||||||||||| |||||||||||| | || |||
Sbjct: 461 gtgaaccgaattccgccggccctgtcacagctcacccttcggaactgcacctggacaatg 402
Query: 514 ccggccttggccttggcgacgcggaggaacgcggcctccgacagctcgaggtgctcccgc 573
| ||||||||||||||||| |||||||| |||||||| | || ||| |||||||||
Sbjct: 401 tcagccttggccttggcgacccggaggaaggcggcctcggtcatctccaggtgctccttg 342
Query: 574 gggaagttgcaccagccgccg 594
|||||||||||||||||||||
Sbjct: 341 gggaagttgcaccagccgccg 321
>gb|BG605102.1|BG605102 WHE2327_D04_H07ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2327_D04_H07, mRNA sequence
Length = 563
Score = 91.7 bits (46), Expect = 5e-017
Identities = 88/102 (86%)
Strand = Plus / Minus
Query: 493 cggaactgcaccggcacgatgccggccttggccttggcgacgcggaggaacgcggcctcc 552
|||||||||||| | || ||| | ||||||||||||||||| |||||||| ||||||||
Sbjct: 286 cggaactgcacctggacaatgtcagccttggccttggcgacccggaggaaggcggcctcg 227
Query: 553 gacagctcgaggtgctcccgcgggaagttgcaccagccgccg 594
| || ||| ||||||||| |||||||||||||||||||||
Sbjct: 226 gtcatctccaggtgctccttggggaagttgcaccagccgccg 185
>gb|CD452968.1|CD452968 WHE1141_G10_M19ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1141_G10_M19,
mRNA sequence
Length = 330
Score = 89.7 bits (45), Expect = 2e-016
Identities = 114/137 (83%)
Strand = Plus / Plus
Query: 180 ctactcggcgaactgcttgccctcgaacgtctgcgcgaacatccagtccgccggcgccac 239
||||||| ||||||||||||| | ||||| ||||| ||||||||||||| ||||| ||
Sbjct: 192 ctactcgacgaactgcttgcctgcaaacgtttgcgcaaacatccagtccgaaggcgcgac 251
Query: 240 gctgtaggcggtgaccgtcctgcccctcccgccggtgacctcgaacgacagcggctgggc 299
| | || |||| |||||||||| | || |||||||||||||||||||| |||||| |
Sbjct: 252 gttatacattgtgatcgtcctgccctttcctccggtgacctcgaacgacagaggctggcc 311
Query: 300 gcggaggtcggcgtcgc 316
|||||||| |||||||
Sbjct: 312 tcggaggtccgcgtcgc 328
>gb|BE446052.1|BE446052 WHE1141_G10_M19ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1141_G10_M19,
mRNA sequence
Length = 308
Score = 73.8 bits (37), Expect = 1e-011
Identities = 97/117 (82%)
Strand = Plus / Minus
Query: 180 ctactcggcgaactgcttgccctcgaacgtctgcgcgaacatccagtccgccggcgccac 239
||||||| ||||||||||||| | ||||| ||||| ||||||||||||| ||||| ||
Sbjct: 117 ctactcgacgaactgcttgcctgcaaacgtttgcgcaaacatccagtccgaaggcgcgac 58
Query: 240 gctgtaggcggtgaccgtcctgcccctcccgccggtgacctcgaacgacagcggctg 296
| | || |||| |||||||||| | || |||||||||||||||||||| |||||
Sbjct: 57 gttatacattgtgatcgtcctgccctttcctccggtgacctcgaacgacagaggctg 1
>gb|BE446405.1|BE446405 WHE1457_G07_N13ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1457_G07_N13,
mRNA sequence
Length = 308
Score = 60.0 bits (30), Expect = 2e-007
Identities = 97/118 (82%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 180 ctactcggcgaactgcttgccctcgaacgtctgcgcgaacatccagtccgccggcgccac 239
||||||| ||||||||||||| | ||||| ||||| ||||||||||||| ||||| ||
Sbjct: 117 ctactcgacgaactgcttgcctgcaaacgtttgcgcaaacatccagtccgaaggcgcgac 58
Query: 240 gctgtaggcggtgaccgtcctgcccctcccgccggtgacctcgaacgacagcggctgg 297
| | || |||| ||||||| || | || |||||||||||||||||||| ||||||
Sbjct: 57 gttatacattgtgatcgtcctg-cctttcctccggtgacctcgaacgacagaggctgg 1
>gb|BF201369.1|BF201369 WHE0990_H02_P04ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0990_H02_P04, mRNA sequence
Length = 386
Score = 48.1 bits (24), Expect = 7e-004
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 303 gaggtcggcgtcgcactgccagttctggccccagtt 338
|||||| |||| || |||||||||||||||||||||
Sbjct: 289 gaggtccgcgttgctctgccagttctggccccagtt 254
>gb|BJ214280.1|BJ214280 BJ214280 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh26k17 5', mRNA sequence
Length = 599
Score = 48.1 bits (24), Expect = 7e-004
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 303 gaggtcggcgtcgcactgccagttctggccccagtt 338
|||||| |||| || |||||||||||||||||||||
Sbjct: 164 gaggtccgcgttgctctgccagttctggccccagtt 129
>gb|BJ221768.1|BJ221768 BJ221768 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh26k17 3', mRNA sequence
Length = 611
Score = 48.1 bits (24), Expect = 7e-004
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 303 gaggtcggcgtcgcactgccagttctggccccagtt 338
|||||| |||| || |||||||||||||||||||||
Sbjct: 448 gaggtccgcgttgctctgccagttctggccccagtt 483
>gb|BJ280310.1|BJ280310 BJ280310 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr7i04 5', mRNA sequence
Length = 516
Score = 48.1 bits (24), Expect = 7e-004
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 303 gaggtcggcgtcgcactgccagttctggccccagtt 338
|||||| |||| || |||||||||||||||||||||
Sbjct: 249 gaggtccgcgttgctctgccagttctggccccagtt 214
>gb|BJ285296.1|BJ285296 BJ285296 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr7i04 3', mRNA sequence
Length = 658
Score = 48.1 bits (24), Expect = 7e-004
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 303 gaggtcggcgtcgcactgccagttctggccccagtt 338
|||||| |||| || |||||||||||||||||||||
Sbjct: 496 gaggtccgcgttgctctgccagttctggccccagtt 531
>gb|BJ285550.1|BJ285550 BJ285550 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr8m22 3', mRNA sequence
Length = 650
Score = 48.1 bits (24), Expect = 7e-004
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 303 gaggtcggcgtcgcactgccagttctggccccagtt 338
|||||| |||| || |||||||||||||||||||||
Sbjct: 455 gaggtccgcgttgctctgccagttctggccccagtt 490
>gb|BQ169431.1|BQ169431 WHE1771_F09_K17ZT Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1771_F09_K17, mRNA sequence
Length = 448
Score = 48.1 bits (24), Expect = 7e-004
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 303 gaggtcggcgtcgcactgccagttctggccccagtt 338
|||||| |||| || |||||||||||||||||||||
Sbjct: 398 gaggtccgcgttgctctgccagttctggccccagtt 433
>gb|BQ839374.1|BQ839374 WHE4165_D06_H11ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4165_D06_H11, mRNA sequence
Length = 631
Score = 48.1 bits (24), Expect = 7e-004
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 303 gaggtcggcgtcgcactgccagttctggccccagtt 338
|||||| |||| || |||||||||||||||||||||
Sbjct: 533 gaggtccgcgttgctctgccagttctggccccagtt 498
>gb|CA714338.1|CA714338 wdk3c.pk018.l12 wdk3c Triticum aestivum cDNA clone wdk3c.pk018.l12
5' end, mRNA sequence
Length = 439
Score = 48.1 bits (24), Expect = 7e-004
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 303 gaggtcggcgtcgcactgccagttctggccccagtt 338
|||||| |||| || |||||||||||||||||||||
Sbjct: 145 gaggtccgcgttgctctgccagttctggccccagtt 110
>gb|CD454188.1|CD454188 WHE0990_H02_P04ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0990_H02_P04, mRNA sequence
Length = 738
Score = 48.1 bits (24), Expect = 7e-004
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 303 gaggtcggcgtcgcactgccagttctggccccagtt 338
|||||| |||| || |||||||||||||||||||||
Sbjct: 547 gaggtccgcgttgctctgccagttctggccccagtt 582
>gb|CK210097.1|CK210097 FGAS021888 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1051
Score = 48.1 bits (24), Expect = 7e-004
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 303 gaggtcggcgtcgcactgccagttctggccccagtt 338
|||||| |||| || |||||||||||||||||||||
Sbjct: 730 gaggtccgcgttgctctgccagttctggccccagtt 695
>gb|DR737942.1|DR737942 FGAS083159 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1109
Score = 48.1 bits (24), Expect = 7e-004
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 303 gaggtcggcgtcgcactgccagttctggccccagtt 338
|||||| |||| || |||||||||||||||||||||
Sbjct: 746 gaggtccgcgttgctctgccagttctggccccagtt 711
>gb|DR739882.1|DR739882 FGAS000149 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1124
Score = 48.1 bits (24), Expect = 7e-004
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 303 gaggtcggcgtcgcactgccagttctggccccagtt 338
|||||| |||| || |||||||||||||||||||||
Sbjct: 740 gaggtccgcgttgctctgccagttctggccccagtt 705
>gb|AY589584.1| Triticum aestivum alpha-expansin EXPA2 mRNA, complete cds
Length = 1142
Score = 48.1 bits (24), Expect = 7e-004
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 303 gaggtcggcgtcgcactgccagttctggccccagtt 338
|||||| |||| || |||||||||||||||||||||
Sbjct: 689 gaggtccgcgttgctctgccagttctggccccagtt 654
>gb|BJ270401.1|BJ270401 BJ270401 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh7i17 5', mRNA sequence
Length = 646
Score = 44.1 bits (22), Expect = 0.011
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 317 actgccagttctggccccagtt 338
||||||||||||||||||||||
Sbjct: 170 actgccagttctggccccagtt 149
>gb|BJ270964.1|BJ270964 BJ270964 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh23h21 5', mRNA sequence
Length = 587
Score = 44.1 bits (22), Expect = 0.011
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 317 actgccagttctggccccagtt 338
||||||||||||||||||||||
Sbjct: 227 actgccagttctggccccagtt 206
>gb|CD886737.1|CD886737 G118.103C04F010605 G118 Triticum aestivum cDNA clone G118103C04,
mRNA sequence
Length = 508
Score = 44.1 bits (22), Expect = 0.011
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 317 actgccagttctggccccagtt 338
||||||||||||||||||||||
Sbjct: 420 actgccagttctggccccagtt 399
>gb|CD913625.1|CD913625 G550.118I10R010921 G550 Triticum aestivum cDNA clone G550118I10,
mRNA sequence
Length = 608
Score = 44.1 bits (22), Expect = 0.011
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 317 actgccagttctggccccagtt 338
||||||||||||||||||||||
Sbjct: 560 actgccagttctggccccagtt 581
>gb|CD938849.1|CD938849 OV.111D22F010309 OV Triticum aestivum cDNA clone OV111D22, mRNA
sequence
Length = 677
Score = 44.1 bits (22), Expect = 0.011
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 317 actgccagttctggccccagtt 338
||||||||||||||||||||||
Sbjct: 101 actgccagttctggccccagtt 80
>gb|AY692477.1| Triticum aestivum alpha-expansin EXPA3 mRNA, partial cds
Length = 932
Score = 44.1 bits (22), Expect = 0.011
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 317 actgccagttctggccccagtt 338
||||||||||||||||||||||
Sbjct: 318 actgccagttctggccccagtt 297
>gb|AY543529.1| Triticum aestivum expansin EXPA3 mRNA, complete cds
Length = 1106
Score = 44.1 bits (22), Expect = 0.011
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 303 gaggtcggcgtcgcactgccagttctggccccag 336
|||||| |||| || |||||||||||||||||||
Sbjct: 692 gaggtccgcgttgctctgccagttctggccccag 659
>gb|AY543535.1| Triticum aestivum expansin EXPA9 mRNA, complete cds
Length = 1013
Score = 44.1 bits (22), Expect = 0.011
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 317 actgccagttctggccccagtt 338
||||||||||||||||||||||
Sbjct: 725 actgccagttctggccccagtt 704
>gb|BE446142.1|BE446142 WHE1142_G10_M20ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1142_G10_M20,
mRNA sequence
Length = 266
Score = 42.1 bits (21), Expect = 0.043
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 181 tactcggcgaactgcttgccctcgaacgtctgcgcgaacatccagtccg 229
|||||| ||||||| ||||| | ||||| ||||| |||||||||||||
Sbjct: 74 tactcgacgaactgtttgcctgcaaacgtttgcgcaaacatccagtccg 26
>gb|CA713582.1|CA713582 wdk3c.pk020.h2 wdk3c Triticum aestivum cDNA clone wdk3c.pk020.h2 5'
end, mRNA sequence
Length = 434
Score = 42.1 bits (21), Expect = 0.043
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 513 gccggccttggccttggcgac 533
|||||||||||||||||||||
Sbjct: 310 gccggccttggccttggcgac 290
>gb|CA733228.1|CA733228 wlp1c.pk008.o19 wlp1c Triticum aestivum cDNA clone wlp1c.pk008.o19
5' end, mRNA sequence
Length = 618
Score = 42.1 bits (21), Expect = 0.043
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 392 cctcgccgtccgccgccacgt 412
|||||||||||||||||||||
Sbjct: 378 cctcgccgtccgccgccacgt 398
>gb|CD862786.1|CD862786 AZO1.104J16F010129 AZO1 Triticum aestivum cDNA clone AZO1104J16,
mRNA sequence
Length = 366
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 510 gatgccggccttggccttgg 529
||||||||||||||||||||
Sbjct: 335 gatgccggccttggccttgg 354
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 185,728
Number of Sequences: 636343
Number of extensions: 185728
Number of successful extensions: 53738
Number of sequences better than 0.5: 33
Number of HSP's better than 0.5 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53676
Number of HSP's gapped (non-prelim): 61
length of query: 596
length of database: 367,240,239
effective HSP length: 19
effective length of query: 577
effective length of database: 355,149,722
effective search space: 204921389594
effective search space used: 204921389594
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)