BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2542512.2.1
(834 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|AX660655.1| Sequence 1012 from Patent WO03000906 278 6e-073
gb|CK163660.1|CK163660 FGAS016290 Triticum aestivum FGAS: L... 264 9e-069
gb|BE445503.1|BE445503 WHE1135_C08_F15ZS Wheat etiolated se... 260 1e-067
gb|CD452876.1|CD452876 WHE1135_C08_F15ZT CS wheat etiolated... 260 1e-067
gb|AL824806.1|AL824806 AL824806 p:234 Triticum aestivum cDN... 238 5e-061
gb|CN008027.1|CN008027 WHE2636_D07_H14ZE Wheat Fusarium gra... 232 3e-059
gb|BE425382.1|BE425382 WHE313_G09_G09ZS Wheat unstressed se... 212 3e-053
gb|AL824805.1|AL824805 AL824805 p:234 Triticum aestivum cDN... 184 7e-045
gb|CV782747.1|CV782747 FGAS077160 Triticum aestivum FGAS: L... 178 4e-043
gb|AL827412.1|AL827412 AL827412 p:638 Triticum aestivum cDN... 167 2e-039
gb|AL822449.1|AL822449 AL822449 p:234 Triticum aestivum cDN... 163 2e-038
gb|CA619927.1|CA619927 wl1n.pk0062.e3 wl1n Triticum aestivu... 159 4e-037
gb|BE419133.1|BE419133 WWR020.E7R000101 ITEC WWR Wheat Root... 155 6e-036
gb|CA697767.1|CA697767 wlk4.pk0010.e1 wlk4 Triticum aestivu... 151 9e-035
gb|BE418633.1|BE418633 SCL072.F07R990707 ITEC SCL Wheat Lea... 115 5e-024
gb|CV782061.1|CV782061 FGAS076474 Triticum aestivum FGAS: L... 109 3e-022
gb|AL827661.1|AL827661 AL827661 p:638 Triticum aestivum cDN... 105 5e-021
gb|BQ803491.1|BQ803491 WHE2838_C09_E18ZS Triticum monococcu... 80 3e-013
gb|CA699330.1|CA699330 wlk8.pk0018.b8 wlk8 Triticum aestivu... 72 7e-011
gb|CA602673.1|CA602673 wr1.pk0019.e10 wr1 Triticum aestivum... 64 2e-008
gb|CA676830.1|CA676830 wlm12.pk0007.f6 wlm12 Triticum aesti... 64 2e-008
gb|CA484859.1|CA484859 WHE4311_E05_J09ZS Wheat meiotic anth... 62 7e-008
gb|CD881252.1|CD881252 F1.102H07F010328 F1 Triticum aestivu... 54 2e-005
gb|CD918287.1|CD918287 G608.108M02R011024 G608 Triticum aes... 54 2e-005
gb|BM137379.1|BM137379 WHE0463-0466_C07_C07ZS Wheat Fusariu... 52 6e-005
gb|CV773595.1|CV773595 FGAS067992 Triticum aestivum FGAS: L... 50 2e-004
gb|BE406428.1|BE406428 WHE0416_e02_j04zB Wheat etiolated se... 48 0.001
gb|BE419776.1|BE419776 WWS017.C5R000101 ITEC WWS Wheat Scut... 48 0.001
gb|BQ162428.1|BQ162428 WHE0416_e02_j04zT Wheat etiolated se... 48 0.001
gb|CA660764.1|CA660764 wlm1.pk0022.a10 wlm1 Triticum aestiv... 46 0.004
gb|BJ284608.1|BJ284608 BJ284608 Y. Ogihara unpublished cDNA... 44 0.015
gb|CA676949.1|CA676949 wlm12.pk0006.a9 wlm12 Triticum aesti... 44 0.015
gb|BE445194.1|BE445194 WHE1133_G11_M21ZS Wheat etiolated se... 42 0.060
gb|BG605352.1|BG605352 WHE2331_G08_N15ZS Wheat pre-anthesis... 42 0.060
gb|BJ284581.1|BJ284581 BJ284581 Y. Ogihara unpublished cDNA... 42 0.060
gb|BJ318841.1|BJ318841 BJ318841 Y. Ogihara unpublished cDNA... 42 0.060
gb|BQ838338.1|BQ838338 WHE2909_C12_E23ZS Wheat aluminum-str... 42 0.060
gb|CA652454.1|CA652454 wre1n.pk196.f1 wre1n Triticum aestiv... 42 0.060
gb|CD866688.1|CD866688 AZO2.104C13F010112 AZO2 Triticum aes... 42 0.060
gb|CD878820.1|CD878820 AZO4.103L04F010929 AZO4 Triticum aes... 42 0.060
gb|DN829429.1|DN829429 KUCD01_09_H09_T3 WSWR cDNA library T... 42 0.060
gb|DN829469.1|DN829469 KUCD01_09_D01_T3 WSWR cDNA library T... 42 0.060
gb|CZ890733.1|CZ890733 utaa002e004g03f1 Bread wheat methyla... 40 0.24
gb|BE423451.1|BE423451 WHE0064_C08_E16ZS Wheat endosperm cD... 40 0.24
gb|BE424734.1|BE424734 WHE0089_H06_P11ZS Wheat endosperm cD... 40 0.24
gb|BE428824.1|BE428824 MTD011.C03F990617 ITEC MTD Durum Whe... 40 0.24
gb|BE446253.1|BE446253 WHE1144_E04_J08ZS Wheat etiolated se... 40 0.24
gb|BF201203.1|BF201203 WHE0986_C05_F10ZS Wheat pre-anthesis... 40 0.24
gb|BM134971.1|BM134971 WHE0460_D04_G07ZS Wheat Fusarium gra... 40 0.24
gb|BJ242668.1|BJ242668 BJ242668 Y. Ogihara unpublished cDNA... 40 0.24
gb|BJ252558.1|BJ252558 BJ252558 Y. Ogihara unpublished cDNA... 40 0.24
gb|BJ254288.1|BJ254288 BJ254288 Y. Ogihara unpublished cDNA... 40 0.24
gb|BJ254877.1|BJ254877 BJ254877 Y. Ogihara unpublished cDNA... 40 0.24
gb|BJ277439.1|BJ277439 BJ277439 Y. Ogihara unpublished cDNA... 40 0.24
gb|BJ282627.1|BJ282627 BJ282627 Y. Ogihara unpublished cDNA... 40 0.24
gb|BQ246864.1|BQ246864 TaE15004D04R TaE15 Triticum aestivum... 40 0.24
gb|BQ483910.1|BQ483910 WHE3514_A07_A14ZS Wheat unstressed r... 40 0.24
gb|AL822374.1|AL822374 AL822374 p:234 Triticum aestivum cDN... 40 0.24
gb|AL829528.1|AL829528 AL829528 p:840 Triticum aestivum cDN... 40 0.24
gb|BQ903118.1|BQ903118 Ta03_09h10_R Ta03_AAFC_ECORC_Fusariu... 40 0.24
gb|BQ905624.1|BQ905624 Ta04_17c05_R Ta04_AAFC_ECORC_Fusariu... 40 0.24
gb|BJ237660.1|BJ237660 BJ237660 Y. Ogihara unpublished cDNA... 40 0.24
gb|BJ254922.1|BJ254922 BJ254922 Y. Ogihara unpublished cDNA... 40 0.24
gb|BJ274913.1|BJ274913 BJ274913 Y. Ogihara unpublished cDNA... 40 0.24
gb|CA499409.1|CA499409 WHE4007_A07_B13ZT Wheat meiotic anth... 40 0.24
gb|CA499648.1|CA499648 WHE4009_H06_O11ZT Wheat meiotic anth... 40 0.24
gb|CA642659.1|CA642659 wre1n.pk0060.d12 wre1n Triticum aest... 40 0.24
gb|CA654722.1|CA654722 wlm0.pk0005.c6 wlm0 Triticum aestivu... 40 0.24
gb|CA736430.1|CA736430 wpi1s.pk007.j17 wpi1s Triticum aesti... 40 0.24
gb|CD453398.1|CD453398 WHE1655-1658_L07_L07ZT CS wheat heat... 40 0.24
gb|CD453896.1|CD453896 WHE0902_C01_E02ZT CS wheat 5-15 DAP ... 40 0.24
gb|CD872471.1|CD872471 AZO2.120L04F010209 AZO2 Triticum aes... 40 0.24
gb|CD881360.1|CD881360 F1.102P05R010628 F1 Triticum aestivu... 40 0.24
gb|CD881958.1|CD881958 F1.104N13R010628 F1 Triticum aestivu... 40 0.24
gb|CD882447.1|CD882447 F1.106M13F010330 F1 Triticum aestivu... 40 0.24
gb|CD883671.1|CD883671 F1.114B05R010702 F1 Triticum aestivu... 40 0.24
gb|CD884707.1|CD884707 F1.117H23F010509 F1 Triticum aestivu... 40 0.24
gb|CD889905.1|CD889905 G118.113G13R010926 G118 Triticum aes... 40 0.24
gb|CD890453.1|CD890453 G118.114K21F010717 G118 Triticum aes... 40 0.24
gb|CD890454.1|CD890454 G118.114K21R010926 G118 Triticum aes... 40 0.24
gb|CD893102.1|CD893102 G118.122N13R010927 G118 Triticum aes... 40 0.24
gb|CD894129.1|CD894129 G118.125H05F010829 G118 Triticum aes... 40 0.24
gb|CD894532.1|CD894532 G118.126H06R011119 G118 Triticum aes... 40 0.24
gb|CD898063.1|CD898063 G174.107P15R011120 G174 Triticum aes... 40 0.24
gb|CD900135.1|CD900135 G174.114J14F010824 G174 Triticum aes... 40 0.24
gb|CD903608.1|CD903608 G356.110N04F010919 G356 Triticum aes... 40 0.24
gb|CD929268.1|CD929268 GR45.107J12F010319 GR45 Triticum aes... 40 0.24
gb|CK161917.1|CK161917 FGAS014497 Triticum aestivum FGAS: L... 40 0.24
gb|CK168954.1|CK168954 FGAS043553 Triticum aestivum FGAS: T... 40 0.24
gb|CK215396.1|CK215396 FGAS027359 Triticum aestivum FGAS: L... 40 0.24
gb|CK216095.1|CK216095 FGAS028073 Triticum aestivum FGAS: L... 40 0.24
gb|CN008326.1|CN008326 WHE2639_H09_P17ZE Wheat Fusarium gra... 40 0.24
gb|CN009300.1|CN009300 WHE3857_B07_D13ZS Wheat Fusarium gra... 40 0.24
gb|CN012877.1|CN012877 WHE3954_A09_B18ZS Wheat Fusarium gra... 40 0.24
gb|CV774863.1|CV774863 FGAS069263 Triticum aestivum FGAS: L... 40 0.24
gb|CV776732.1|CV776732 FGAS071136 Triticum aestivum FGAS: L... 40 0.24
gb|DR752084.1|DR752084 G2-360 Wheat Aluminum SSH Library Tr... 40 0.24
>emb|AX660655.1| Sequence 1012 from Patent WO03000906
Length = 923
Score = 278 bits (140), Expect = 6e-073
Identities = 354/423 (83%), Gaps = 2/423 (0%)
Strand = Plus / Plus
Query: 50 gccggaacggagacgacgtcgtccacgatagaatgggccatgtcgctgctgctgaaccac 109
|||||||||||||| || || |||||| |||||||| |||||||| ||||||||||||
Sbjct: 206 gccggaacggagaccacctcaagcacgatcgaatgggcgatgtcgctcctgctgaaccac 265
Query: 110 ccggaggcgctgaagaaggccgaggcagagatcgaggcggccgt-gggcngtcccgcctc 168
|||| ||||||||||||||| |||| ||||| || ||| || | ||| |||||| |
Sbjct: 266 ccggcggcgctgaagaaggcgcaggccgagatggacgcgtccattgggacctcccgcatg 325
Query: 169 atcaccatggacgacgtgccggggctgggctacctgcagtgcgtcatcaacgagacgctg 228
||||| ||||||||||| | || ||||||| |||||| ||||||||||||||||
Sbjct: 326 gtcaccgccgacgacgtgccccgcctcagctacctccagtgcatcatcaacgagacgcta 385
Query: 229 cgcctgtacccggtggccccgctgctgctgccgcacgagtcgacggcggactgcacggtc 288
||||||||||||| ||| ||||||||||||||||||||||| | || ||||||| ||||
Sbjct: 386 cgcctgtacccggcggcgccgctgctgctgccgcacgagtcctccgccgactgcaaggtc 445
Query: 289 ggcggctacgaagtgccccgcggcacgctgctgttcgtcacacgcgtacgccatccacag 348
||||||||||| ||||| ||||||| ||||| |||| | |||||||||||||||||||
Sbjct: 446 ggcggctacgacgtgccgagcggcaccatgctgatcgtga-acgcgtacgccatccacag 504
Query: 349 ggacccggcggcgtgggaggagccggacgagttcaggccggagcggttccgcgacggcaa 408
||||||||| | ||||||||| ||| | |||| |||||||||||||| ||||||||
Sbjct: 505 ggacccggccgtgtgggaggacccgacggcgttccggccggagcggttcgaggacggcaa 564
Query: 409 ggccgagggccggctgatgctgccgttcgggatgggacggcgcaggtgccccggggagac 468
|| ||| || | |||| || |||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 565 gggcgacgggctgctgctgatgccgttcgggatggggcggcggaggtgccccggcgagac 624
Query: 469 gct 471
|||
Sbjct: 625 gct 627
>gb|CK163660.1|CK163660 FGAS016290 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1089
Score = 264 bits (133), Expect = 9e-069
Identities = 362/436 (83%), Gaps = 2/436 (0%)
Strand = Plus / Plus
Query: 50 gccggaacggagacgacgtcgtccacgatagaatgggccatgtcgctgctgctgaaccac 109
|||||||||||||| |||||| | |||| || ||||| |||||||||||||||||||||
Sbjct: 375 gccggaacggagaccacgtcgacgacgacggagtgggcgatgtcgctgctgctgaaccac 434
Query: 110 ccggaggcgctgaagaaggccgaggcagagatcgaggcggccgtgggcng-tcccgcctc 168
|||| |||||| || ||||| |||| |||||||| |||||||||||| ||||| ||
Sbjct: 435 ccggcggcgctcaaaaaggcgcaggccgagatcgacgcggccgtgggcacctcccggctg 494
Query: 169 atcaccatggacgacgtgccggggctgggctacctgcagtgcgtcatcaacgagacgctg 228
| ||| ||||||||||| |||||| ||||||||||||| || | | ||||||||||
Sbjct: 495 gtgaccgccgacgacgtgccacggctggcctacctgcagtgcatcgtgagcgagacgctg 554
Query: 229 cgcctgtacccggtggccccgctgctgctgccgcacgagtcgacggcggactgcacggtc 288
|| |||||||||| ||| ||| ||||||||||||||||||| |||| ||||||| |||
Sbjct: 555 cggctgtacccggcggcgccgatgctgctgccgcacgagtcctcggcagactgcaaggtg 614
Query: 289 ggcggctacgaagtgccccgcggcacgctgctgttcgtcacacgcgtacgccatccacag 348
||||||||| | ||||| |||||||| ||||| | || | ||||||||||||||||| |
Sbjct: 615 ggcggctacaacgtgccgagcggcacgatgctgatggtga-acgcgtacgccatccaccg 673
Query: 349 ggacccggcggcgtgggaggagccggacgagttcaggccggagcggttccgcgacggcaa 408
|||||||| |||||||||| |||| |||||| |||||||||||| ||||| ||
Sbjct: 674 ggacccggaggcgtgggagcggccgctggagttcgtcccggagcggttcgaggacgggaa 733
Query: 409 ggccgagggccggctgatgctgccgttcgggatgggacggcgcaggtgccccggggagac 468
||||||||| ||| | ||| | |||||||||||||| || || ||||||||||||||||
Sbjct: 734 ggccgaggggcggttcatgatcccgttcgggatgggccgccgggggtgccccggggagac 793
Query: 469 gctcgctctgcggacc 484
||| || |||||||||
Sbjct: 794 gctggcgctgcggacc 809
>gb|BE445503.1|BE445503 WHE1135_C08_F15ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1135_C08_F15,
mRNA sequence
Length = 494
Score = 260 bits (131), Expect = 1e-067
Identities = 240/275 (87%), Gaps = 1/275 (0%)
Strand = Plus / Plus
Query: 197 gctacctgcagtgcgtcatcaacgagacgctgcgcctgtacccggtggccccgctgctgc 256
||||||| |||||| |||||||||||||||| ||||||||||||| ||| ||||||||||
Sbjct: 24 gctacctccagtgcatcatcaacgagacgctacgcctgtacccggcggcgccgctgctgc 83
Query: 257 tgccgcacgagtcgacggcggactgcacggtcggcggctacgaagtgccccgcggcacgc 316
||||||||||||| | || ||||||| ||||||||||||||| ||||| ||||||||
Sbjct: 84 tgccgcacgagtcctccgccgactgcaaggtcggcggctacgacgtgccaagcggcacga 143
Query: 317 tgctgttcgtcacacgcgtacgccatccacagggacccggcggcgtgggaggagccggac 376
||||| |||| | |||||||||||||||||||||||||||| | ||||||||| ||||
Sbjct: 144 tgctgatcgtga-acgcgtacgccatccacagggacccggccgtgtgggaggacccggcg 202
Query: 377 gagttcaggccggagcggttccgcgacggcaaggccgagggccggctgatgctgccgttc 436
| |||| |||||||||||||| |||||||||||||| || | |||| || ||||||||
Sbjct: 203 gcgttccggccggagcggttcgaggacggcaaggccgacgggctgctgctgatgccgttc 262
Query: 437 gggatgggacggcgcaggtgccccggggagacgct 471
|||||||| ||||| ||||||||||| ||||||||
Sbjct: 263 gggatggggcggcggaggtgccccggcgagacgct 297
>gb|CD452876.1|CD452876 WHE1135_C08_F15ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1135_C08_F15,
mRNA sequence
Length = 694
Score = 260 bits (131), Expect = 1e-067
Identities = 240/275 (87%), Gaps = 1/275 (0%)
Strand = Plus / Minus
Query: 197 gctacctgcagtgcgtcatcaacgagacgctgcgcctgtacccggtggccccgctgctgc 256
||||||| |||||| |||||||||||||||| ||||||||||||| ||| ||||||||||
Sbjct: 668 gctacctccagtgcatcatcaacgagacgctacgcctgtacccggcggcgccgctgctgc 609
Query: 257 tgccgcacgagtcgacggcggactgcacggtcggcggctacgaagtgccccgcggcacgc 316
||||||||||||| | || ||||||| ||||||||||||||| ||||| ||||||||
Sbjct: 608 tgccgcacgagtcctccgccgactgcaaggtcggcggctacgacgtgccaagcggcacga 549
Query: 317 tgctgttcgtcacacgcgtacgccatccacagggacccggcggcgtgggaggagccggac 376
||||| |||| | |||||||||||||||||||||||||||| | ||||||||| ||||
Sbjct: 548 tgctgatcgtga-acgcgtacgccatccacagggacccggccgtgtgggaggacccggcg 490
Query: 377 gagttcaggccggagcggttccgcgacggcaaggccgagggccggctgatgctgccgttc 436
| |||| |||||||||||||| |||||||||||||| || | |||| || ||||||||
Sbjct: 489 gcgttccggccggagcggttcgaggacggcaaggccgacgggctgctgctgatgccgttc 430
Query: 437 gggatgggacggcgcaggtgccccggggagacgct 471
|||||||| ||||| ||||||||||| ||||||||
Sbjct: 429 gggatggggcggcggaggtgccccggcgagacgct 395
>gb|AL824806.1|AL824806 AL824806 p:234 Triticum aestivum cDNA clone C12_p234_plate_3, mRNA
sequence
Length = 401
Score = 238 bits (120), Expect = 5e-061
Identities = 271/319 (84%), Gaps = 2/319 (0%)
Strand = Plus / Plus
Query: 50 gccggaacggagacgacgtcgtccacgatagaatgggccatgtcgctgctgctgaaccac 109
|||||||||||||| |||||| | |||| || ||||| |||||||||||||||||||||
Sbjct: 77 gccggaacggagaccacgtcgacgacgacggagtgggcgatgtcgctgctgctgaaccac 136
Query: 110 ccggaggcgctgaagaaggccgaggcagagatcgaggcggccgtgggcng-tcccgcctc 168
|||| |||||||| |||||| |||| |||||||| ||||||||||| ||||| ||
Sbjct: 137 ccggcggcgctgaggaaggcgcaggccgagatcgacgcggccgtggggacctcccggctg 196
Query: 169 atcaccatggacgacgtgccggggctgggctacctgcagtgcgtcatcaacgagacgctg 228
| ||| |||||||||||| |||| | ||||||||||||| || | | ||||||||||
Sbjct: 197 gtgaccgcggacgacgtgccccggctcgcctacctgcagtgcatcgtgagcgagacgctg 256
Query: 229 cgcctgtacccggtggccccgctgctgctgccgcacgagtcgacggcggactgcacggtc 288
|| |||||||||| ||| ||| |||||||||||||| |||| |||||||||||| ||||
Sbjct: 257 cggctgtacccggcggcgccgatgctgctgccgcaccagtcctcggcggactgcaaggtc 316
Query: 289 ggcggctacgaagtgccccgcggcacgctgctgttcgtcacacgcgtacgccatccacag 348
||||||||||| ||||| |||||||| ||||| | || | |||||||||||||||||||
Sbjct: 317 ggcggctacgacgtgccgagcggcacgatgctgatggtga-acgcgtacgccatccacag 375
Query: 349 ggacccggcggcgtgggag 367
||||||||||| |||||||
Sbjct: 376 ggacccggcggtgtgggag 394
>gb|CN008027.1|CN008027 WHE2636_D07_H14ZE Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2636_D07_H14,
mRNA sequence
Length = 497
Score = 232 bits (117), Expect = 3e-059
Identities = 336/408 (82%), Gaps = 1/408 (0%)
Strand = Plus / Plus
Query: 177 ggacgacgtgccggggctgggctacctgcagtgcgtcatcaacgagacgctgcgcctgta 236
|||||||||||| |||| | ||||||||||||| || | | |||||||||||| |||||
Sbjct: 47 ggacgacgtgccccggctcgcctacctgcagtgcatcgtgagcgagacgctgcggctgta 106
Query: 237 cccggtggccccgctgctgctgccgcacgagtcgacggcggactgcacggtcggcggcta 296
||||| ||| ||| |||||||||||||| |||| |||||||||||| ||||||||||||
Sbjct: 107 cccggcggcgccgatgctgctgccgcaccagtcctcggcggactgcaaggtcggcggcta 166
Query: 297 cgaagtgccccgcggcacgctgctgttcgtcacacgcgtacgccatccacagggacccgg 356
| | ||||| |||||||| ||||| | || | |||||||||||||||||||||||||||
Sbjct: 167 caacgtgccgagcggcacgatgctgatggtga-acgcgtacgccatccacagggacccgg 225
Query: 357 cggcgtgggaggagccggacgagttcaggccggagcggttccgcgacggcaaggccgagg 416
||| ||||||| ||| |||||| |||||||||||| ||||| ||||||||||
Sbjct: 226 cggtgtgggagcgcccgctggagttcgtcccggagcggttcgaggacgggaaggccgagg 285
Query: 417 gccggctgatgctgccgttcgggatgggacggcgcaggtgccccggggagacgctcgctc 476
| ||| | ||| | |||||||||||||| ||||| ||||||||||||||||||| || |
Sbjct: 286 ggcggttcatgatcccgttcgggatgggccggcggcggtgccccggggagacgctggcgc 345
Query: 477 tgcggaccgccggcctcgtgctcgccacgctcatccagtgcttccactgggacagaatcg 536
|||||||| ||| | ||||| |||||||| | ||||||||| ||||||| | | |
Sbjct: 346 tgcggaccattggcatggtgctggccacgctggtgcagtgcttcnactgggagcgcgtgg 405
Query: 537 atggcgctgagatcgacatgaccgagagcggcgggctcaccatgcccc 584
| ||||| ||| | |||||||| ||| |||| ||||||||||| ||||
Sbjct: 406 acggcgcggaggtggacatgacggagggcggagggctcaccatccccc 453
>gb|BE425382.1|BE425382 WHE313_G09_G09ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE313_G09_G09, mRNA
sequence
Length = 374
Score = 212 bits (107), Expect = 3e-053
Identities = 285/343 (83%), Gaps = 1/343 (0%)
Strand = Plus / Plus
Query: 178 gacgacgtgccggggctgggctacctgcagtgcgtcatcaacgagacgctgcgcctgtac 237
||||||||||| |||||| ||||||||||||| || | | |||||||||||| |||||
Sbjct: 33 gacgacgtgccacggctggcctacctgcagtgcatcgtgagcgagacgctgcggctgtat 92
Query: 238 ccggtggccccgctgctgctgccgcacgagtcgacggcggactgcacggtcggcggctac 297
|||| ||| ||| ||||||||||||||||||| |||| ||||||| ||| |||||||||
Sbjct: 93 ccggcggcgccgatgctgctgccgcacgagtcctcggcagactgcaaggtgggcggctac 152
Query: 298 gaagtgccccgcggcacgctgctgttcgtcacacgcgtacgccatccacagggacccggc 357
| ||||| |||||||| ||||| | || | ||||||||||||||||| ||||||||||
Sbjct: 153 aacgtgccgagcggcacgatgctgatggtga-acgcgtacgccatccaccgggacccggc 211
Query: 358 ggcgtgggaggagccggacgagttcaggccggagcggttccgcgacggcaaggccgaggg 417
|||||||||| |||| |||||| |||||||||||| ||||| |||||||||||
Sbjct: 212 ggcgtgggagcggccgctggagttcgtcccggagcggttcgaggacgggaaggccgaggg 271
Query: 418 ccggctgatgctgccgttcgggatgggacggcgcaggtgccccggggagacgctcgctct 477
||| | ||| | |||||||||||||| || || ||||||||||||||||||| || ||
Sbjct: 272 gcggttcatgatcccgttcgggatgggccgccggcggtgccccggggagacgctggcgct 331
Query: 478 gcggaccgccggcctcgtgctcgccacgctcatccagtgcttc 520
||||||| |||| | ||||| |||||||| | |||||||||
Sbjct: 332 gcggaccatcggcatggtgctggccacgctggtgcagtgcttc 374
>gb|AL824805.1|AL824805 AL824805 p:234 Triticum aestivum cDNA clone C11_p234_plate_3, mRNA
sequence
Length = 471
Score = 184 bits (93), Expect = 7e-045
Identities = 264/319 (82%), Gaps = 2/319 (0%)
Strand = Plus / Plus
Query: 50 gccggaacggagacgacgtcgtccacgatagaatgggccatgtcgctgctgctgaaccac 109
|||||||||||||| |||||| | |||| || ||||| |||||||||||||||||||||
Sbjct: 78 gccggaacggagaccacgtcgacgacgactgagtgggcgatgtcgctgctgctgaaccac 137
Query: 110 ccggaggcgctgaagaaggccgaggcagagatcgaggcggccgtgggcng-tcccgcctc 168
|||| |||||| | |||||| |||| |||||||| ||||||||||| ||||| ||
Sbjct: 138 ccggcggcgctnaggaaggcgcaggccgagatcgacgcggccgtggggacctcccggctg 197
Query: 169 atcaccatggacgacgtgccggggctgggctacctgcagtgcgtcatcaacgagacgctg 228
| ||| |||||||||||| |||| | ||||||||||||| || | | ||||||||||
Sbjct: 198 gtgaccgcggacgacgtgccccggctcgcctacctgcagtgcatcgtgagcgagacgctg 257
Query: 229 cgcctgtacccggtggccccgctgctgctgccgcacgagtcgacggcggactgcacggtc 288
|| |||||||| | ||| || | |||||||||||| |||| |||||||||||| ||||
Sbjct: 258 cggctgtaccctgcggcgcctatactgctgccgcaccagtcctcggcggactgcaaggtc 317
Query: 289 ggcggctacgaagtgccccgcggcacgctgctgttcgtcacacgcgtacgccatccacag 348
||||||||| | ||||| |||||||| |||| | || | |||||||||||||||||||
Sbjct: 318 ggcggctaccacgtgccgagcggcacgatgcttatggtga-acgcgtacgccatccacag 376
Query: 349 ggacccggcggcgtgggag 367
|||||| |||| |||||||
Sbjct: 377 ggaccctgcggtgtgggag 395
>gb|CV782747.1|CV782747 FGAS077160 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 845
Score = 178 bits (90), Expect = 4e-043
Identities = 267/321 (83%), Gaps = 4/321 (1%)
Strand = Plus / Plus
Query: 50 gccggaacggagacgacgtcgtccacgatagaatgggccatgtcgctgctgctgaaccac 109
||||| |||||||| |||||| | |||| || ||||| |||||||||||||||||||||
Sbjct: 455 gccgggacggagaccacgtcgacgacgacggagtgggcgatgtcgctgctgctgaaccac 514
Query: 110 ccggaggcgctgaagaaggccgaggcagagatcgaggcggccgtgggcng-tcccgcctc 168
|||| |||||||| |||||| ||| |||||||| ||||||||||| ||||| ||
Sbjct: 515 ccggcggcgctgaggaaggcgcaggacgagatcgacgcggccgtggggacctcccggctg 574
Query: 169 atcaccatggacgacgtgccggggctgggctacctgcagtgcgtcatcaacgagacgctg 228
| ||| ||||||||||| |||||| ||||||||||||| || | | ||||||||||
Sbjct: 575 gtgaccgccgacgacgtgccccggctggcctacctgcagtgcatcgtgagcgagacgctg 634
Query: 229 cgcctgtacccggtggccccgctgctgctgccgcacgagtcgacggcggactgcacggtc 288
|| |||||||||| ||| ||| |||||||||||||| |||| |||| ||||||| ||||
Sbjct: 635 cggctgtacccggcggcaccgatgctgctgccgcaccagtcctcggctgactgcaaggtc 694
Query: 289 ggcggctacgaagtgccccgcggcacgctgctgttcgtcacacgcgtacgccatcca-ca 347
||||||||| | ||||| |||||||| ||||| | || | |||||||||||||||| |
Sbjct: 695 ggcggctacaacgtgccgagcggcacgatgctgatggtga-acgcgtacgccatccaccc 753
Query: 348 gggacccggcgg-cgtgggag 367
|||||||||||| ||||||||
Sbjct: 754 gggacccggcggncgtgggag 774
>gb|AL827412.1|AL827412 AL827412 p:638 Triticum aestivum cDNA clone H01_p638_plate_2, mRNA
sequence
Length = 583
Score = 167 bits (84), Expect = 2e-039
Identities = 270/328 (82%), Gaps = 3/328 (0%)
Strand = Plus / Plus
Query: 253 ctgctgccgcacgagtcgacggcggactgcacggtcggcggctacgaagtgccccgcggc 312
|||||||||||| |||| |||||||||||| ||||||||||||| | ||||| |||||
Sbjct: 6 ctgctgccgcaccagtcctcggcggactgcaaggtcggcggctacaacgtgccgagcggc 65
Query: 313 acgctgctgttcgtcacacgcgtacgccatccacagggacccggcggcgtgggaggagcc 372
||| ||||| | || | |||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 66 acgatgctgat-gtga-acgcgtacgccatccacagggacccggcggtgtgggagcgccc 123
Query: 373 ggacgagttcaggccggagcggttccgcga-cggcaaggccgagggccggctgatgctgc 431
| |||||| |||||||||||||| || ||| ||||||||||| ||| | ||| | |
Sbjct: 124 gctggagttcgtcccggagcggttccgagaacgggaaggccgaggggcggttcatgatcc 183
Query: 432 cgttcgggatgggacggcgcaggtgccccggggagacgctcgctctgcggaccgccggcc 491
||||||||||||| ||||| ||||||||||||||||||| || ||||||||| |||
Sbjct: 184 cgttcgggatgggccggcggcggtgccccggggagacgctggcgctgcggaccattggca 243
Query: 492 tcgtgctcgccacgctcatccagtgcttccactgggacagaatcgatggcgctgagatcg 551
| ||||| |||||||| | ||||||||| ||||||| | | || ||||| ||| | |
Sbjct: 244 tggtgctggccacgctggtgcagtgcttcgactgggagcgcgtggacggcgcggaggtgg 303
Query: 552 acatgaccgagagcggcgggctcaccat 579
||||||| ||| |||| |||||||||||
Sbjct: 304 acatgacggagggcggagggctcaccat 331
>gb|AL822449.1|AL822449 AL822449 p:234 Triticum aestivum cDNA clone G11_p234_plate_25, mRNA
sequence
Length = 588
Score = 163 bits (82), Expect = 2e-038
Identities = 164/190 (86%), Gaps = 1/190 (0%)
Strand = Plus / Plus
Query: 178 gacgacgtgccggggctgggctacctgcagtgcgtcatcaacgagacgctgcgcctgtac 237
|||||||||||| |||| | |||||| |||||| || | | ||||||||| || ||||||
Sbjct: 385 gacgacgtgccgcggctcgcctaccttcagtgcatcgtgagcgagacgcttcggctgtac 444
Query: 238 ccggtggccccgctgctgctgccgcacgagtcgacggcggactgcacggtcggcggctac 297
|||| ||| |||||||||||||||||| |||| |||||||||||| ||| |||||||||
Sbjct: 445 ccggcggcgccgctgctgctgccgcaccagtcctcggcggactgcaaggtgggcggctac 504
Query: 298 gaagtgccccgcggcacgctgctgttcgtcacacgcgtacgccatccacagggacccggc 357
|| ||||| |||||||| ||||| | || | ||||||||||||||||| ||||||||||
Sbjct: 505 gacgtgccgagcggcacgatgctgattgtga-acgcgtacgccatccaccgggacccggc 563
Query: 358 ggcgtgggag 367
||||||||||
Sbjct: 564 ggcgtgggag 573
Score = 67.9 bits (34), Expect = 1e-009
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 89 atgtcgctgctgctgaaccacccggaggcgctgaagaaggccgaggcagagatcgaggcg 148
||||||||||||||||||||||||| |||||| || ||||| |||| |||||||| |||
Sbjct: 295 atgtcgctgctgctgaaccacccggcggcgctcaaaaaggcgcaggccgagatcgacgcg 354
Query: 149 gc 150
||
Sbjct: 355 gc 356
>gb|CA619927.1|CA619927 wl1n.pk0062.e3 wl1n Triticum aestivum cDNA clone wl1n.pk0062.e3 5'
end, mRNA sequence
Length = 390
Score = 159 bits (80), Expect = 4e-037
Identities = 140/160 (87%)
Strand = Plus / Plus
Query: 459 ccggggagacgctcgctctgcggaccgccggcctcgtgctcgccacgctcatccagtgct 518
|||| ||||||||||| |||||||||| ||| || ||||| |||||||| |||||||||
Sbjct: 1 ccggcgagacgctcgcgctgcggaccgtcgggctggtgcttgccacgctgctccagtgct 60
Query: 519 tccactgggacagaatcgatggcgctgagatcgacatgaccgagagcggcgggctcacca 578
|| ||||||||| | ||||| |||||| | |||||||| |||||||||||||| ||||
Sbjct: 61 tcgactgggacacggttgatggagctgaggttgacatgacggagagcggcgggctgacca 120
Query: 579 tgccccgggccgtcccgttggaggccacctgcaagcctcg 618
||||||||||||||||||||||||||| |||||||||||
Sbjct: 121 tgccccgggccgtcccgttggaggccatgtgcaagcctcg 160
>gb|BE419133.1|BE419133 WWR020.E7R000101 ITEC WWR Wheat Root Library Triticum aestivum cDNA
clone WWR020.E7, mRNA sequence
Length = 306
Score = 155 bits (78), Expect = 6e-036
Identities = 163/190 (85%), Gaps = 1/190 (0%)
Strand = Plus / Plus
Query: 178 gacgacgtgccggggctgggctacctgcagtgcgtcatcaacgagacgctgcgcctgtac 237
|||||||||||| |||||| ||||||||||||| || | | |||||||||||| ||||||
Sbjct: 71 gacgacgtgccgcggctggcctacctgcagtgcatcgtgagcgagacgctgcgactgtac 130
Query: 238 ccggtggccccgctgctgctgccgcacgagtcgacggcggactgcacggtcggcggctac 297
|||| ||| ||| |||||||||||||| |||| | |||||||||| |||||||||||||
Sbjct: 131 ccggcggcgccgatgctgctgccgcaccagtcctcagcggactgcaaggtcggcggctac 190
Query: 298 gaagtgccccgcggcacgctgctgttcgtcacacgcgtacgccatccacagggacccggc 357
| ||||| |||||||| ||||| | || | ||||||||||||||||| | ||||||||
Sbjct: 191 aacgtgccgagcggcacgatgctgatggtga-acgcgtacgccatccaccgcgacccggc 249
Query: 358 ggcgtgggag 367
||| ||||||
Sbjct: 250 ggcatgggag 259
>gb|CA697767.1|CA697767 wlk4.pk0010.e1 wlk4 Triticum aestivum cDNA clone wlk4.pk0010.e1 5'
end, mRNA sequence
Length = 436
Score = 151 bits (76), Expect = 9e-035
Identities = 217/261 (83%), Gaps = 3/261 (1%)
Strand = Plus / Plus
Query: 100 gctgaaccacccggaggcgctgaagaaggccgaggcagagatcgaggcggccgtgggcng 159
|||||||||||||| |||||||| |||||| |||| |||||||| |||||||||||
Sbjct: 1 gctgaaccacccggcggcgctgaggaaggcgcaggccgagatcgacgcggccgtggggac 60
Query: 160 -tcccgcctcatcaccatggacgacgtgccggggctgggctacctgcagtgcgtcatcaa 218
||||| || | ||| |||||||||||| |||| | ||||||||||||| || | |
Sbjct: 61 ctcccggctggtgaccgcggacgacgtgccccggctcgcctacctgcagtgcatcgtgag 120
Query: 219 cgagacgctgcgcctgtacccggtggccccgctgctgctgccgcacgagtcgacggcgga 278
|||||||||||| |||||||||| ||| ||| |||||||||||||| |||| |||||||
Sbjct: 121 cgagacgctgcggctgtacccggcggcgccgatgctgctgccgcaccagtcctcggcgga 180
Query: 279 ctgcacggtcggcggctacgaagtgccccgcggcacgctgctgttcgtcacacgcgtacg 338
||||| |||| |||||||| | || || |||||||| ||||| | || | ||||||||
Sbjct: 181 ctgcaaggtcngcggctacaacgtnccgagcggcacgatgctgatggtga-acgcgtac- 238
Query: 339 ccatccacagggacccggcgg 359
|||||||||||||||||||||
Sbjct: 239 ccatccacagggacccggcgg 259
>gb|BE418633.1|BE418633 SCL072.F07R990707 ITEC SCL Wheat Leaf Library Triticum aestivum
cDNA clone SCL072.F07, mRNA sequence
Length = 679
Score = 115 bits (58), Expect = 5e-024
Identities = 220/275 (80%)
Strand = Plus / Minus
Query: 330 acgcgtacgccatccacagggacccggcggcgtgggaggagccggacgagttcaggccgg 389
||||||||||||||| | || |||||||||||||||| |||| |||||| ||||
Sbjct: 568 acgcgtacgccatccnccggnacccggcggcgtgggaccggccgctggagttcgtcccgg 509
Query: 390 agcggttccgcgacggcaaggccgagggccggctgatgctgccgttcgggatgggacggc 449
|||||||| ||||| ||| ||||||| ||| | ||| | |||||||||||||| ||||
Sbjct: 508 agcggttcgaggacgggaagnccgaggggcggttcatgatcccgttcgggatgggccggc 449
Query: 450 gcaggtgccccggggagacgctcgctctgcggaccgccggcctcgtgctcgccacgctca 509
| |||||||||| |||||||| || |||||||| |||| | ||||| ||||||||
Sbjct: 448 ggcggtgccccggagagacgctggcgctgcggactatcggcatggtgctggccacgctgg 389
Query: 510 tccagtgcttccactgggacagaatcgatggcgctgagatcgacatgaccgagagcggcg 569
| ||||||||| ||||||| | | || ||||| ||| | |||||||| ||| ||||||
Sbjct: 388 tgcagtgcttcgactgggagcgcgtggacggcgcggaggtggacatgacggagggcggcg 329
Query: 570 ggctcaccatgccccgggccgtcccgttggaggcc 604
|||||||||| ||| |||||| ||| | ||||||
Sbjct: 328 ggctcaccatccccaaggccgtgccgctcgaggcc 294
>gb|CV782061.1|CV782061 FGAS076474 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 892
Score = 109 bits (55), Expect = 3e-022
Identities = 182/222 (81%), Gaps = 2/222 (0%)
Strand = Plus / Plus
Query: 50 gccggaacggagacgacgtcgtccacgatagaatgggccatgtcgctgctgctgaaccac 109
||||| |||||||| |||||| | |||| || ||||| |||||||||||||||||||||
Sbjct: 335 gccgggacggagaccacgtcgacgacgacggagtgggcgatgtcgctgctgctgaaccac 394
Query: 110 ccggaggcgctgaagaaggccgaggcagagatcgaggcggccgt-gggcngtcccgcctc 168
|||| |||||||| |||||| ||| |||||||| |||||||| ||| ||||| ||
Sbjct: 395 ccggcggcgctgaggaaggcgcaggacgagatcgacgcggccgtggggacctcccggctg 454
Query: 169 atcaccatggacgacgtgccggggctgggctacctgcagtgcgtcatcaacgagacgctg 228
| ||| ||||||||||| || ||| ||||||||||||| || | | ||||||||||
Sbjct: 455 gtgaccgccgacgacgtgccccggttggcctacctgcagtgcatcgtgagcgagacgctg 514
Query: 229 cgcctgta-cccggtggccccgctgctgctgccgcacgagtc 269
|| ||||| ||||| ||| ||| |||||||||||||| ||||
Sbjct: 515 cggctgtaccccggcggcaccgatgctgctgccgcaccagtc 556
>gb|AL827661.1|AL827661 AL827661 p:638 Triticum aestivum cDNA clone E03_p638_plate_13, mRNA
sequence
Length = 568
Score = 105 bits (53), Expect = 5e-021
Identities = 103/117 (88%), Gaps = 2/117 (1%)
Strand = Plus / Plus
Query: 251 tgctgctgccgcacgagtcgacggcggactgcacggtcggcggctacgaagtgccccgcg 310
|||||||||||||| |||| |||||||||||| ||||||||||||| | ||||| |||
Sbjct: 11 tgctgctgccgcaccagtcctcggcggactgcaaggtcggcggctacaacgtgccgagcg 70
Query: 311 gcacgctgctgttcgtcacacgcgtacgccatccacagggacccggcggcgtgggag 367
||||| ||||| | || | |||||||||||||||||||||||||||||| |||||||
Sbjct: 71 gcacgatgctgat-gtga-acgcgtacgccatccacagggacccggcggtgtgggag 125
Score = 54.0 bits (27), Expect = 2e-005
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 402 acggcaaggccgagggccggctgatgctgccgttcgggatgggacggcgcaggtgccccg 461
|||| ||||||||||| ||| | ||| | |||||||||||||| ||||| |||||||||
Sbjct: 162 acggaaaggccgaggggcggttcatgatcccgttcgggatgggccggcggcggtgccccg 221
Query: 462 gg-gagacgct 471
|| ||||||||
Sbjct: 222 ggtgagacgct 232
>gb|BQ803491.1|BQ803491 WHE2838_C09_E18ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2838_C09_E18, mRNA
sequence
Length = 621
Score = 79.8 bits (40), Expect = 3e-013
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 50 gccggaacggagacgacgtcgtccacgatagaatgggccatgtcgctgctgctgaaccac 109
|||||||||||||| || || |||||| |||||||| |||||||| ||||||||||||
Sbjct: 498 gccggaacggagaccacctcaagcacgatcgaatgggcgatgtcgctcctgctgaaccac 557
Query: 110 ccggaggcgctgaagaaggccgaggcagagat 141
|||| |||||| || |||||| |||| |||||
Sbjct: 558 ccggcggcgctcaacaaggcccaggccgagat 589
>gb|CA699330.1|CA699330 wlk8.pk0018.b8 wlk8 Triticum aestivum cDNA clone wlk8.pk0018.b8 5'
end, mRNA sequence
Length = 465
Score = 71.9 bits (36), Expect = 7e-011
Identities = 154/191 (80%), Gaps = 2/191 (1%)
Strand = Plus / Plus
Query: 386 ccggagcggttccgcgacggcaaggccgagggccggctgatgctgccgttcgggatggga 445
|||||||||||| ||||| ||||||||||| ||| | ||| | |||||||||||||
Sbjct: 258 ccggagcggttcgaggacgggaaggccgaggggcggttcatgatctcgttcgggatgggc 317
Query: 446 cggcgcaggtgccccggggagacgctcgctctgcggaccgccggcctcgtgctcgccacg 505
|| || ||||||||||||||||||| || ||||||||| |||| | ||||| | |||
Sbjct: 318 cgccggcggtgccccggggagacgctggcgctgcggaccatcggcatggtgctgggcac- 376
Query: 506 ctcatccagtgcttccactgggacagaatcgatggcgctgagatcgacatgaccgagagc 565
|| | ||||||||| ||||||| | |||| ||||| ||| | |||||||| ||| ||
Sbjct: 377 ctggtgcagtgcttcnactggga-ggcgtcgacggcgcggaggtggacatgacggagggc 435
Query: 566 ggcgggctcac 576
|||||||||||
Sbjct: 436 ggcgggctcac 446
>gb|CA602673.1|CA602673 wr1.pk0019.e10 wr1 Triticum aestivum cDNA clone wr1.pk0019.e10 5'
end, mRNA sequence
Length = 499
Score = 63.9 bits (32), Expect = 2e-008
Identities = 122/152 (80%)
Strand = Plus / Plus
Query: 453 ggtgccccggggagacgctcgctctgcggaccgccggcctcgtgctcgccacgctcatcc 512
|||||||||| |||||||| || |||||||| |||| | ||||| |||||||| | |
Sbjct: 16 ggtgccccggagagacgctggcgctgcggactatcggcatggtgctggccacgctggtgc 75
Query: 513 agtgcttccactgggacagaatcgatggcgctgagatcgacatgaccgagagcggcgggc 572
|||||||| ||||||| | | || ||||| ||| | |||||||| ||| |||||||||
Sbjct: 76 agtgcttcgactgggagcgcgtggacggcgcggaggtggacatgacggagggcggcgggc 135
Query: 573 tcaccatgccccgggccgtcccgttggaggcc 604
||||||| ||| |||||| ||| | ||||||
Sbjct: 136 tcaccatccccaaggccgtgccgctcgaggcc 167
>gb|CA676830.1|CA676830 wlm12.pk0007.f6 wlm12 Triticum aestivum cDNA clone wlm12.pk0007.f6
5' end, mRNA sequence
Length = 407
Score = 63.9 bits (32), Expect = 2e-008
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 50 gccggaacggagacgacgtcgtccacgatagaatgggccatgtcgctgctgctgaaccac 109
|||||||||||||| ||||| | |||| || ||||| |||||||||||||||||||||
Sbjct: 258 gccggaacggagaccacgtcnacgacgacggagtgggcgatgtcgctgctgctgaaccac 317
Query: 110 cc-ggaggcgctgaagaaggc 129
|| || || ||||| ||||||
Sbjct: 318 ccnggcggngctgangaaggc 338
>gb|CA484859.1|CA484859 WHE4311_E05_J09ZS Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4311_E05_J09, mRNA sequence
Length = 672
Score = 61.9 bits (31), Expect = 7e-008
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 347 agggacccggcggcgtgggaggagccggacgagttcaggccggagcggttc 397
|||||||||||||||||||| | |||||| |||||| | ||||||||||||
Sbjct: 356 agggacccggcggcgtgggacgcgccggaggagttccgaccggagcggttc 406
>gb|CD881252.1|CD881252 F1.102H07F010328 F1 Triticum aestivum cDNA clone F1102H07, mRNA
sequence
Length = 706
Score = 54.0 bits (27), Expect = 2e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 348 gggacccggcggcgtgggaggagccggacgagttcaggccggagcggttcc 398
|||||||||||||||||||| ||| ||||||||| ||||||| ||||||
Sbjct: 414 gggacccggcggcgtgggagaggcccgacgagttcgtgccggagaggttcc 464
>gb|CD918287.1|CD918287 G608.108M02R011024 G608 Triticum aestivum cDNA clone G608108M02,
mRNA sequence
Length = 690
Score = 54.0 bits (27), Expect = 2e-005
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 348 gggacccggcggcgtgggaggagccggacgagttcaggccggagcggttcc 398
|||||||||||||||||||| ||| ||||||||| ||||||| ||||||
Sbjct: 428 gggacccggcggcgtgggagaggcccgacgagttcgtgccggagaggttcc 378
>gb|BM137379.1|BM137379 WHE0463-0466_C07_C07ZS Wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
WHE0463-0466_C07_C07, mRNA sequence
Length = 603
Score = 52.0 bits (26), Expect = 6e-005
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 434 ttcgggatgggacggcgcaggtgccccggggaga 467
|||||||||||| |||||| ||||||||||||||
Sbjct: 307 ttcgggatgggaaggcgcaagtgccccggggaga 340
Score = 42.1 bits (21), Expect = 0.060
Identities = 57/69 (82%)
Strand = Plus / Plus
Query: 199 tacctgcagtgcgtcatcaacgagacgctgcgcctgtacccggtggccccgctgctgctg 258
||||| || ||| ||||||| |||||| |||| |||| ||||| || |||||||||||
Sbjct: 70 tacctccactgcatcatcaatgagacgatgcggctgtgcccggccgcgccgctgctgcta 129
Query: 259 ccgcacgag 267
|| ||||||
Sbjct: 130 ccacacgag 138
>gb|CV773595.1|CV773595 FGAS067992 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 837
Score = 50.1 bits (25), Expect = 2e-004
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 350 gacccggcggcgtgggaggagccggacgagttcaggccggagcggttcc 398
|||||||||||||||||||| || |||||| |||||||||||||||
Sbjct: 367 gacccggcggcgtgggaggaccccctggagttccggccggagcggttcc 415
>gb|BE406428.1|BE406428 WHE0416_e02_j04zB Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0416_e02_j04, mRNA
sequence
Length = 390
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 362 tgggaggagccggacgagttcaggccggagcggttc 397
|||||||||||| ||||||| ||||||||||||||
Sbjct: 342 tgggaggagccgctcgagttccggccggagcggttc 377
>gb|BE419776.1|BE419776 WWS017.C5R000101 ITEC WWS Wheat Scutellum Library Triticum aestivum
cDNA clone WWS017.C5, mRNA sequence
Length = 622
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 362 tgggaggagccggacgagttcaggccggagcggttc 397
|||||| ||||||| ||||||||||||||| |||||
Sbjct: 390 tgggagaagccggaggagttcaggccggagaggttc 425
Score = 40.1 bits (20), Expect = 0.24
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 199 tacctgcagtgcgtcatcaacgagacgctgcg 230
||||||||| ||||||||| |||||||||||
Sbjct: 228 tacctgcaggccgtcatcaaggagacgctgcg 259
>gb|BQ162428.1|BQ162428 WHE0416_e02_j04zT Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0416_e02_j04, mRNA
sequence
Length = 484
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 362 tgggaggagccggacgagttcaggccggagcggttc 397
|||||||||||| ||||||| ||||||||||||||
Sbjct: 462 tgggaggagccgctcgagttccggccggagcggttc 427
>gb|CA660764.1|CA660764 wlm1.pk0022.a10 wlm1 Triticum aestivum cDNA clone wlm1.pk0022.a10
5' end, mRNA sequence
Length = 438
Score = 46.1 bits (23), Expect = 0.004
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 431 ccgttcgggatgggacggcgcaggtgccccggggagacgctcgctctgcggacc 484
|||||||||||||| ||||| | | ||||||||||||||| || |||||||||
Sbjct: 321 ccgttcgggatgggccggcggcg-tnccccggggagacgctggcgctgcggacc 269
>gb|BJ284608.1|BJ284608 BJ284608 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr3n19 3', mRNA sequence
Length = 520
Score = 44.1 bits (22), Expect = 0.015
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 361 gtgggaggagccggacgagttcaggccggagcggttcc 398
|||||| | |||||| ||||||| ||||||||||||||
Sbjct: 442 gtgggaagcgccggaggagttcatgccggagcggttcc 405
>gb|CA676949.1|CA676949 wlm12.pk0006.a9 wlm12 Triticum aestivum cDNA clone wlm12.pk0006.a9
5' end, mRNA sequence
Length = 596
Score = 44.1 bits (22), Expect = 0.015
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 361 gtgggaggagccggacgagttcaggccggagcggttcc 398
|||||| | |||||| ||||||| ||||||||||||||
Sbjct: 130 gtgggaagcgccggaggagttcatgccggagcggttcc 167
>gb|BE445194.1|BE445194 WHE1133_G11_M21ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1133_G11_M21,
mRNA sequence
Length = 542
Score = 42.1 bits (21), Expect = 0.060
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 374 gacgagttcaggccggagcggttcc 398
||||||||| |||||||||||||||
Sbjct: 95 gacgagttccggccggagcggttcc 119
>gb|BG605352.1|BG605352 WHE2331_G08_N15ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2331_G08_N15, mRNA sequence
Length = 328
Score = 42.1 bits (21), Expect = 0.060
Identities = 59/71 (83%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 330 acgcgtacgccatccacagggacccggcggcgtggg---aggagccggacgagttcaggc 386
||||||||||||||||| | |||||||| | ||||| || ||| || ||||||||||
Sbjct: 194 acgcgtacgccatccaccgcgacccggctgagtggggaccggcgcccgaggagttcaggc 253
Query: 387 cggagcggttc 397
||||| |||||
Sbjct: 254 cggagaggttc 264
Score = 42.1 bits (21), Expect = 0.060
Identities = 57/69 (82%)
Strand = Plus / Plus
Query: 199 tacctgcagtgcgtcatcaacgagacgctgcgcctgtacccggtggccccgctgctgctg 258
||||| || ||| ||||||| |||||| |||| |||| ||||| || |||||||||||
Sbjct: 64 tacctccactgcatcatcaatgagacgatgcggctgtgcccggccgcgccgctgctgcta 123
Query: 259 ccgcacgag 267
|| ||||||
Sbjct: 124 ccacacgag 132
Score = 40.1 bits (20), Expect = 0.24
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 434 ttcgggatgggacggcgcaggtgccccg 461
|||||||||||| |||||| ||||||||
Sbjct: 301 ttcgggatgggaaggcgcaagtgccccg 328
>gb|BJ284581.1|BJ284581 BJ284581 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr3l23 3', mRNA sequence
Length = 468
Score = 42.1 bits (21), Expect = 0.060
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 370 gccggacgagttcaggccggagcggttcc 398
|||||| ||||||| ||||||||||||||
Sbjct: 462 gccggaggagttcatgccggagcggttcc 434
>gb|BJ318841.1|BJ318841 BJ318841 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf3k08 3', mRNA sequence
Length = 612
Score = 42.1 bits (21), Expect = 0.060
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 374 gacgagttcaggccggagcggttcc 398
|||||||||||||| ||||||||||
Sbjct: 489 gacgagttcaggcccgagcggttcc 465
>gb|BQ838338.1|BQ838338 WHE2909_C12_E23ZS Wheat aluminum-stressed root tip cDNA library
Triticum aestivum cDNA clone WHE2909_C12_E23, mRNA
sequence
Length = 447
Score = 42.1 bits (21), Expect = 0.060
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 374 gacgagttcaggccggagcggttcc 398
||||||||| |||||||||||||||
Sbjct: 63 gacgagttccggccggagcggttcc 87
>gb|CA652454.1|CA652454 wre1n.pk196.f1 wre1n Triticum aestivum cDNA clone wre1n.pk196.f1 5'
end, mRNA sequence
Length = 501
Score = 42.1 bits (21), Expect = 0.060
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 374 gacgagttcaggccggagcggttcc 398
|||||||||||||| ||||||||||
Sbjct: 129 gacgagttcaggcccgagcggttcc 153
>gb|CD866688.1|CD866688 AZO2.104C13F010112 AZO2 Triticum aestivum cDNA clone AZO2104C13,
mRNA sequence
Length = 578
Score = 42.1 bits (21), Expect = 0.060
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 247 ccgctgctgctgccgcacgag 267
|||||||||||||||||||||
Sbjct: 217 ccgctgctgctgccgcacgag 237
>gb|CD878820.1|CD878820 AZO4.103L04F010929 AZO4 Triticum aestivum cDNA clone AZO4103L04,
mRNA sequence
Length = 620
Score = 42.1 bits (21), Expect = 0.060
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 350 gacccggcggcgtgggaggagccggacgagttcaggccggagcggttcc 398
||||||| |||||||||||| || |||||| |||||||||||||||
Sbjct: 161 gacccggtggcgtgggaggaccccctggagttccggccggagcggttcc 209
>gb|DN829429.1|DN829429 KUCD01_09_H09_T3 WSWR cDNA library Triticum aestivum cDNA, mRNA
sequence
Length = 923
Score = 42.1 bits (21), Expect = 0.060
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 374 gacgagttcaggccggagcggttcc 398
|||||||||||||| ||||||||||
Sbjct: 600 gacgagttcaggcccgagcggttcc 576
>gb|DN829469.1|DN829469 KUCD01_09_D01_T3 WSWR cDNA library Triticum aestivum cDNA, mRNA
sequence
Length = 931
Score = 42.1 bits (21), Expect = 0.060
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 374 gacgagttcaggccggagcggttcc 398
|||||||||||||| ||||||||||
Sbjct: 593 gacgagttcaggcccgagcggttcc 569
>gb|CZ890733.1|CZ890733 utaa002e004g03f1 Bread wheat methylation unfiltered library (LibID:
138) Triticum aestivum genomic, DNA sequence
Length = 557
Score = 40.1 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 507 tcatccagtgcttccactgg 526
||||||||||||||||||||
Sbjct: 419 tcatccagtgcttccactgg 400
>gb|BE423451.1|BE423451 WHE0064_C08_E16ZS Wheat endosperm cDNA library Triticum aestivum
cDNA clone WHE0064_C08_E16, mRNA sequence
Length = 584
Score = 40.1 bits (20), Expect = 0.24
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 362 tgggaggagccggacgagttcaggccggagcggttc 397
||||| || ||||| ||||||| |||||||||||||
Sbjct: 429 tgggacgacccggaggagttcaagccggagcggttc 394
>gb|BE424734.1|BE424734 WHE0089_H06_P11ZS Wheat endosperm cDNA library Triticum aestivum
cDNA clone WHE0089_H06_P11, mRNA sequence
Length = 545
Score = 40.1 bits (20), Expect = 0.24
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 362 tgggaggagccggacgagttcaggccggagcggttc 397
||||| || ||||| ||||||| |||||||||||||
Sbjct: 426 tgggacgacccggaggagttcaagccggagcggttc 391
>gb|BE428824.1|BE428824 MTD011.C03F990617 ITEC MTD Durum Wheat Root Library Triticum
turgidum subsp. durum cDNA clone MTD011.C03, mRNA
sequence
Length = 397
Score = 40.1 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 350 gacccggcggcgtgggagga 369
||||||||||||||||||||
Sbjct: 64 gacccggcggcgtgggagga 83
>gb|BE446253.1|BE446253 WHE1144_E04_J08ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1144_E04_J08,
mRNA sequence
Length = 542
Score = 40.1 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 350 gacccggcggcgtgggagga 369
||||||||||||||||||||
Sbjct: 397 gacccggcggcgtgggagga 416
>gb|BF201203.1|BF201203 WHE0986_C05_F10ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0986_C05_F10, mRNA sequence
Length = 461
Score = 40.1 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 507 tcatccagtgcttccactgg 526
||||||||||||||||||||
Sbjct: 388 tcatccagtgcttccactgg 369
>gb|BM134971.1|BM134971 WHE0460_D04_G07ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0460_D04_G07,
mRNA sequence
Length = 598
Score = 40.1 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 350 gacccggcggcgtgggagga 369
||||||||||||||||||||
Sbjct: 204 gacccggcggcgtgggagga 223
>gb|BJ242668.1|BJ242668 BJ242668 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe24i06 3', mRNA sequence
Length = 697
Score = 40.1 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 507 tcatccagtgcttccactgg 526
||||||||||||||||||||
Sbjct: 640 tcatccagtgcttccactgg 659
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 245,488
Number of Sequences: 636343
Number of extensions: 245488
Number of successful extensions: 74396
Number of sequences better than 0.5: 98
Number of HSP's better than 0.5 without gapping: 97
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 74226
Number of HSP's gapped (non-prelim): 145
length of query: 834
length of database: 367,240,239
effective HSP length: 19
effective length of query: 815
effective length of database: 355,149,722
effective search space: 289447023430
effective search space used: 289447023430
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)