BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521641.2.1
(594 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE443671.1|BE443671 WHE1121_F03_K05ZS Wheat etiolated se... 202 2e-050
gb|CA701904.1|CA701904 wkm2c.pk005.p21 wkm2c Triticum aesti... 202 2e-050
gb|CD452713.1|CD452713 WHE1121_F03_K05ZT CS wheat etiolated... 182 2e-044
gb|BQ169564.1|BQ169564 WHE0954_E10_J20ZT Wheat pre-anthesis... 153 2e-035
gb|BJ305513.1|BJ305513 BJ305513 Y. Ogihara unpublished cDNA... 139 2e-031
gb|BJ311097.1|BJ311097 BJ311097 Y. Ogihara unpublished cDNA... 139 2e-031
gb|CD932095.1|CD932095 GR45.116N13R010613 GR45 Triticum aes... 68 7e-010
gb|BF473330.1|BF473330 WHE0923_C03_F05ZS Wheat 5-15 DAP spi... 62 5e-008
gb|BQ246543.1|BQ246543 TaE15008G07R TaE15 Triticum aestivum... 62 5e-008
gb|CD899215.1|CD899215 G174.111J02F010827 G174 Triticum aes... 60 2e-007
gb|BE489184.1|BE489184 WHE1075_G06_M11ZS Wheat unstressed s... 56 3e-006
gb|BE398846.1|BE398846 WHE0027.A04F990514 ITEC WHE Wheat En... 54 1e-005
gb|BQ245567.1|BQ245567 TaE15023A05R TaE15 Triticum aestivum... 54 1e-005
gb|BQ806910.1|BQ806910 WHE3584_E10_I20ZS Wheat developing g... 54 1e-005
gb|BJ249314.1|BJ249314 BJ249314 Y. Ogihara unpublished cDNA... 52 4e-005
gb|CA710781.1|CA710781 wdk2c.pk016.f22 wdk2c Triticum aesti... 50 2e-004
gb|CV778572.1|CV778572 FGAS072981 Triticum aestivum FGAS: L... 48 7e-004
gb|BQ243798.1|BQ243798 TaE15008G07F TaE15 Triticum aestivum... 46 0.003
gb|CD899159.1|CD899159 G174.111F15F010824 G174 Triticum aes... 46 0.003
gb|CD899523.1|CD899523 G174.112K24F010824 G174 Triticum aes... 46 0.003
gb|CK205296.1|CK205296 FGAS016764 Triticum aestivum FGAS: L... 46 0.003
gb|AL812076.1|AL812076 AL812076 e:310 Triticum aestivum cDN... 46 0.003
gb|CD932094.1|CD932094 GR45.116N13F010420 GR45 Triticum aes... 44 0.011
gb|BQ246704.1|BQ246704 TaE15006G04R TaE15 Triticum aestivum... 40 0.17
gb|CD896167.1|CD896167 G174.102A02F010822 G174 Triticum aes... 40 0.17
>gb|BE443671.1|BE443671 WHE1121_F03_K05ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1121_F03_K05,
mRNA sequence
Length = 618
Score = 202 bits (102), Expect = 2e-050
Identities = 248/294 (84%), Gaps = 2/294 (0%)
Strand = Plus / Plus
Query: 302 tagagctggccgtaggagtgcgcgaggtaggcgagcgcgccgacgagcggcgcgttgatg 361
|||||||||||| ||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 311 tagagctggccggaggagtgggcgaggtaggcgagggccccgacgagcggcgcgttgatg 370
Query: 362 taggtggccggctccgagtgctcgtggtcgttccgctcgtcggggaacctgtcctgcatg 421
||||||||||||||||||||||||| |||| | |||| ||| |||||| ||| | | |
Sbjct: 371 taggtggccggctccgagtgctcgtagtcgctgcgctggtccgggaactggtcgttctgg 430
Query: 422 tcgggtcccccgacgacggcaccgacgagcaggttgggattggccccacccgcgtacagc 481
| ||| || || |||||||| |||||| | | ||| || |||||| | || | ||| |||
Sbjct: 431 ttgggcccgcccacgacggcgccgacgtgaacgttcgggttggccgcgccggagtagagc 490
Query: 482 gcggtgaacccctgcgagcaaccgatcctagccgggtgcgccgccacggacggcagcgac 541
| ||||||||||||||||| |||||| | ||||||||||||| ||||| |||||||||
Sbjct: 491 cccgtgaacccctgcgagcagccgatcttccccgggtgcgccgcgacggagggcagcgac 550
Query: 542 gaagcgcggtggtggatgcggc-gcgggtacttggcgccgtagcccaccatgta 594
|| || |||||||||| || | |||||||||||||||||| |||||||||||
Sbjct: 551 gaggcccggtggtgga-gcttcttcgggtacttggcgccgtaccccaccatgta 603
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 216 gttttgcttgcactggggtc 235
||||||||||||||||||||
Sbjct: 198 gttttgcttgcactggggtc 217
>gb|CA701904.1|CA701904 wkm2c.pk005.p21 wkm2c Triticum aestivum cDNA clone wkm2c.pk005.p21
5' end, mRNA sequence
Length = 506
Score = 202 bits (102), Expect = 2e-050
Identities = 248/294 (84%), Gaps = 2/294 (0%)
Strand = Plus / Minus
Query: 302 tagagctggccgtaggagtgcgcgaggtaggcgagcgcgccgacgagcggcgcgttgatg 361
|||||||||||| ||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 310 tagagctggccggaggagtgggcgaggtaggcgagggccccgacgagcggcgcgttgatg 251
Query: 362 taggtggccggctccgagtgctcgtggtcgttccgctcgtcggggaacctgtcctgcatg 421
||||||||||||||||||||||||| |||| | |||| |||||||||| ||| | | |
Sbjct: 250 taggtggccggctccgagtgctcgtagtcgctgcgctggtcggggaactggtcgttctgg 191
Query: 422 tcgggtcccccgacgacggcaccgacgagcaggttgggattggccccacccgcgtacagc 481
| ||| || || |||||||| |||||| ||| ||| || ||||| | || | ||| |||
Sbjct: 190 ttgggcccgcccacgacggcgccgacgtgcacgttcgggttggcggcgccggagtagagc 131
Query: 482 gcggtgaacccctgcgagcaaccgatcctagccgggtgcgccgccacggacggcagcgac 541
| ||||||||||||||||| |||||| | ||||||||||||| ||||| ||||||||
Sbjct: 130 cccgtgaacccctgcgagcagccgatcttgcccgggtgcgccgcgacggagggcagcgag 71
Query: 542 gaagcgcggtggtggatgcggc-gcgggtacttggcgccgtagcccaccatgta 594
|| || |||||||||| || | |||||||||||||||||| |||||||||||
Sbjct: 70 gaggcccggtggtgga-gcttcttcgggtacttggcgccgtaccccaccatgta 18
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 216 gttttgcttgcactggggtc 235
||||||||||||||||||||
Sbjct: 418 gttttgcttgcactggggtc 399
>gb|CD452713.1|CD452713 WHE1121_F03_K05ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1121_F03_K05,
mRNA sequence
Length = 591
Score = 182 bits (92), Expect = 2e-044
Identities = 215/256 (83%)
Strand = Plus / Minus
Query: 302 tagagctggccgtaggagtgcgcgaggtaggcgagcgcgccgacgagcggcgcgttgatg 361
|||||||||||| ||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 283 tagagctggccggaggagtgggcgaggtaggcgagggccccgacgagcggcgcgttgatg 224
Query: 362 taggtggccggctccgagtgctcgtggtcgttccgctcgtcggggaacctgtcctgcatg 421
||||||||||||||||||||||||| || | | |||| ||| |||||| ||| | | |
Sbjct: 223 taggtggccggctccgagtgctcgtagtagctgcgctggtccgggaactggtcgttctgg 164
Query: 422 tcgggtcccccgacgacggcaccgacgagcaggttgggattggccccacccgcgtacagc 481
| ||| || || |||||||| |||||| | | ||| || |||||| | || | ||| |||
Sbjct: 163 ttgggcccgcccacgacggcgccgacgtgaacgttcgggttggccgcgccggagtagagc 104
Query: 482 gcggtgaacccctgcgagcaaccgatcctagccgggtgcgccgccacggacggcagcgac 541
| ||||||||||||||||| |||||| | ||||||||||||| ||||| |||||||||
Sbjct: 103 cccgtgaacccctgcgagcagccgatcttccccgggtgcgccgcgacggagggcagcgac 44
Query: 542 gaagcgcggtggtgga 557
|| || ||||||||||
Sbjct: 43 gaggcccggtggtgga 28
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 216 gttttgcttgcactggggtc 235
||||||||||||||||||||
Sbjct: 396 gttttgcttgcactggggtc 377
>gb|BQ169564.1|BQ169564 WHE0954_E10_J20ZT Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0954_E10_J20, mRNA sequence
Length = 529
Score = 153 bits (77), Expect = 2e-035
Identities = 101/109 (92%)
Strand = Plus / Plus
Query: 301 ttagagctggccgtaggagtgcgcgaggtaggcgagcgcgccgacgagcggcgcgttgat 360
||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 314 ttagagctggccggaggagtgcgcgaggtaagcgagcgctccgacgagcggcgcgttgat 373
Query: 361 gtaggtggccggctccgagtgctcgtggtcgttccgctcgtcggggaac 409
|||||||||||||||||||||||||| |||| | |||| ||| ||||||
Sbjct: 374 gtaggtggccggctccgagtgctcgtagtcgctgcgctggtccgggaac 422
>gb|BJ305513.1|BJ305513 BJ305513 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd26d24 5', mRNA sequence
Length = 511
Score = 139 bits (70), Expect = 2e-031
Identities = 85/90 (94%)
Strand = Plus / Minus
Query: 302 tagagctggccgtaggagtgcgcgaggtaggcgagcgcgccgacgagcggcgcgttgatg 361
|||||||||||| ||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 470 tagagctggccggaggagtgggcgaggtaggcgagggccccgacgagcggcgcgttgatg 411
Query: 362 taggtggccggctccgagtgctcgtggtcg 391
||||||||||||||||||||||||| ||||
Sbjct: 410 taggtggccggctccgagtgctcgtagtcg 381
>gb|BJ311097.1|BJ311097 BJ311097 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd26d24 3', mRNA sequence
Length = 737
Score = 139 bits (70), Expect = 2e-031
Identities = 85/90 (94%)
Strand = Plus / Plus
Query: 302 tagagctggccgtaggagtgcgcgaggtaggcgagcgcgccgacgagcggcgcgttgatg 361
|||||||||||| ||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 248 tagagctggccggaggagtgggcgaggtaggcgagggccccgacgagcggcgcgttgatg 307
Query: 362 taggtggccggctccgagtgctcgtggtcg 391
||||||||||||||||||||||||| ||||
Sbjct: 308 taggtggccggctccgagtgctcgtagtcg 337
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 216 gttttgcttgcactggggtc 235
||||||||||||||||||||
Sbjct: 140 gttttgcttgcactggggtc 159
>gb|CD932095.1|CD932095 GR45.116N13R010613 GR45 Triticum aestivum cDNA clone GR45116N13,
mRNA sequence
Length = 457
Score = 67.9 bits (34), Expect = 7e-010
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 330 aggcgagcgcgccgacgagcggcgcgttgatgtaggtggccggctc 375
||||||| ||||||||||||||||||||| ||||||||| ||||||
Sbjct: 193 aggcgagggcgccgacgagcggcgcgttggtgtaggtggacggctc 238
Score = 42.1 bits (21), Expect = 0.043
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 421 gtcgggtcccccgacgacggcaccgacgagcaggttg 457
|||||| || ||||||||||| |||||||||| ||||
Sbjct: 284 gtcggggccgccgacgacggcgccgacgagcacgttg 320
>gb|BF473330.1|BF473330 WHE0923_C03_F05ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0923_C03_F05, mRNA sequence
Length = 430
Score = 61.9 bits (31), Expect = 5e-008
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 512 gccgggtgcgccgccacggacggcagcgacgaagcgcggtggtggatgcggcgcgggtac 571
||||||||||| ||||||||||||| |||||| || | ||||||||| | |||||||
Sbjct: 375 gccgggtgcgcggccacggacggcatcgacgacgccctgtggtggatcctctgcgggtag 316
Query: 572 ttggcgccgtagcccaccatgta 594
||||||||||||||||||||
Sbjct: 315 cgcgcgccgtagcccaccatgta 293
>gb|BQ246543.1|BQ246543 TaE15008G07R TaE15 Triticum aestivum cDNA clone TaE15008G07R, mRNA
sequence
Length = 698
Score = 61.9 bits (31), Expect = 5e-008
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 512 gccgggtgcgccgccacggacggcagcgacgaagcgcggtggtggatgcggcgcgggtac 571
||||||||||| ||||||||||||| |||||| || | ||||||||| | |||||||
Sbjct: 576 gccgggtgcgcggccacggacggcatcgacgacgccctgtggtggatcctctgcgggtag 517
Query: 572 ttggcgccgtagcccaccatgta 594
||||||||||||||||||||
Sbjct: 516 cgcgcgccgtagcccaccatgta 494
>gb|CD899215.1|CD899215 G174.111J02F010827 G174 Triticum aestivum cDNA clone G174111J02,
mRNA sequence
Length = 477
Score = 60.0 bits (30), Expect = 2e-007
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 513 ccgggtgcgccgccacggacggcagcgacgaagcgcggtggtggatgcggcgcgggtact 572
|||||||||| ||||||||||||| |||||| || | ||||||||| | |||||||
Sbjct: 395 ccgggtgcgcggccacggacggcatcgacgacgccctgtggtggatcctctgcgggtagc 336
Query: 573 tggcgccgtagcccaccatgta 594
||||||||||||||||||||
Sbjct: 335 gcgcgccgtagcccaccatgta 314
>gb|BE489184.1|BE489184 WHE1075_G06_M11ZS Wheat unstressed seedling shoot normalized cDNA
library Triticum aestivum cDNA clone WHE1075_G06_M11,
mRNA sequence
Length = 394
Score = 56.0 bits (28), Expect = 3e-006
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 503 ccgatcctagccgggtgcgccgccacggacggcagcgacgaagcgcggtggtggatgcgg 562
|||||||| ||||||||||||||||||||||| | || ||||||||||||| |||
Sbjct: 280 ccgatcctcgccgggtgcgccgccacggacgggatggagctgccgcggtggtggatccgg 221
Query: 563 cgcgggtacttggcgccgtagcccaccatgta 594
|||||| || | ||||||||| ||||||||
Sbjct: 220 cgcgggaaccgcgggccgtagccgaccatgta 189
>gb|BE398846.1|BE398846 WHE0027.A04F990514 ITEC WHE Wheat Endosperm Library Triticum
aestivum cDNA clone WHE0027.A04, mRNA sequence
Length = 412
Score = 54.0 bits (27), Expect = 1e-005
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 512 gccgggtgcgccgccacggacggcagcgacgaagcgcggtggtggatgcggcgcgggtac 571
||||||||||| ||||||||||||| ||| || || | ||||||||| | |||||||
Sbjct: 316 gccgggtgcgcggccacggacggcatcgaggacgccctgtggtggatcctctgcgggtag 375
Query: 572 ttggcgccgtagcccaccatgta 594
||||||||||||||||||||
Sbjct: 376 cgcgcgccgtagcccaccatgta 398
>gb|BQ245567.1|BQ245567 TaE15023A05R TaE15 Triticum aestivum cDNA clone TaE15023A05R, mRNA
sequence
Length = 614
Score = 54.0 bits (27), Expect = 1e-005
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 512 gccgggtgcgccgccacggacggcagcgacgaagcgcggtggtggatgcggcgcgggtac 571
||||||||||| ||||||||||||| ||| || || | ||||||||| | |||||||
Sbjct: 533 gccgggtgcgcggccacggacggcatcgaggacgccctgtggtggatcctctgcgggtag 474
Query: 572 ttggcgccgtagcccaccatgta 594
||||||||||||||||||||
Sbjct: 473 cgcgcgccgtagcccaccatgta 451
>gb|BQ806910.1|BQ806910 WHE3584_E10_I20ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3584_E10_I20, mRNA sequence
Length = 597
Score = 54.0 bits (27), Expect = 1e-005
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 512 gccgggtgcgccgccacggacggcagcgacgaagcgcggtggtggatgcggcgcgggtac 571
||||||||||| ||||||||||||| ||| || || | ||||||||| | |||||||
Sbjct: 376 gccgggtgcgcggccacggacggcatcgaggacgccctgtggtggatcctctgcgggtag 317
Query: 572 ttggcgccgtagcccaccatgta 594
||||||||||||||||||||
Sbjct: 316 cgcgcgccgtagcccaccatgta 294
>gb|BJ249314.1|BJ249314 BJ249314 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf10g01 3', mRNA sequence
Length = 613
Score = 52.0 bits (26), Expect = 4e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 545 gcgcggtggtggatgcggcgcgggtacttggcgccgtagcccaccatgta 594
||||||||||||||||| |||||| || | ||||| |||||||||||||
Sbjct: 455 gcgcggtggtggatgcgccgcgggaacgcgccgccgaagcccaccatgta 504
Score = 44.1 bits (22), Expect = 0.011
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 353 gcgttgatgtaggtggccggctccgagtgc 382
|||||||||||||| |||||||| ||||||
Sbjct: 260 gcgttgatgtaggtcgccggctcggagtgc 289
>gb|CA710781.1|CA710781 wdk2c.pk016.f22 wdk2c Triticum aestivum cDNA clone wdk2c.pk016.f22
5' end, mRNA sequence
Length = 321
Score = 50.1 bits (25), Expect = 2e-004
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 512 gccgggtgcgccgccacggacggcagcgacgaagcgcggtggtgg 556
||||||||||| ||||||||||||| |||||| || | |||||||
Sbjct: 214 gccgggtgcgcggccacggacggcatcgacgacgccctgtggtgg 258
>gb|CV778572.1|CV778572 FGAS072981 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 850
Score = 48.1 bits (24), Expect = 7e-004
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 421 gtcgggtcccccgacgacggcaccgacgagcaggttgggattgg 464
|||||| || ||||||| ||| |||||||||| |||||||||||
Sbjct: 230 gtcgggcccgccgacgatggcgccgacgagcacgttgggattgg 187
>gb|BQ243798.1|BQ243798 TaE15008G07F TaE15 Triticum aestivum cDNA clone TaE15008G07F, mRNA
sequence
Length = 535
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 512 gccgggtgcgccgccacggacggcagcgacgaagcgcggtggtggat 558
||||||||||| ||||||||||||| |||| | || | |||||||||
Sbjct: 358 gccgggtgcgcggccacggacggcatcgacaacgccctgtggtggat 404
>gb|CD899159.1|CD899159 G174.111F15F010824 G174 Triticum aestivum cDNA clone G174111F15,
mRNA sequence
Length = 566
Score = 46.1 bits (23), Expect = 0.003
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 512 gccgggtgcgccgccacggacggcagcgacgaagcgcggtggtggatgcggcgcgggtac 571
||||||||||| ||| ||||||||| ||| || || | ||||||||| | |||||||
Sbjct: 462 gccgggtgcgcggccccggacggcatcgaggacgccctgtggtggatcctctgcgggtag 403
Query: 572 ttggcgccgtagcccaccatgta 594
||||||||||||||||||||
Sbjct: 402 cgcgcgccgtagcccaccatgta 380
>gb|CD899523.1|CD899523 G174.112K24F010824 G174 Triticum aestivum cDNA clone G174112K24,
mRNA sequence
Length = 552
Score = 46.1 bits (23), Expect = 0.003
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 512 gccgggtgcgccgccacggacggcagcgacgaagcgcggtggtggatgcggcgcgggtac 571
||||||||||| |||||||||||| ||| || || | ||||||||| | |||||||
Sbjct: 536 gccgggtgcgcgtccacggacggcatcgaggacgccctgtggtggatcctctgcgggtag 477
Query: 572 ttggcgccgtagcccaccatgta 594
||||||||||||||||||||
Sbjct: 476 cgcgcgccgtagcccaccatgta 454
>gb|CK205296.1|CK205296 FGAS016764 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1024
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 566 gggtacttggcgccgtagcccac 588
|||||||||||||||||||||||
Sbjct: 594 gggtacttggcgccgtagcccac 616
>gb|AL812076.1|AL812076 AL812076 e:310 Triticum aestivum cDNA clone F10_e310_plate_10, mRNA
sequence
Length = 593
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 512 gccgggtgcgccgccacggacggcagcgacgaagcgcggtggtggat 558
||||||||||| ||||||||||||| ||| || || | |||||||||
Sbjct: 552 gccgggtgcgcggccacggacggcatcgaggacgccctgtggtggat 506
>gb|CD932094.1|CD932094 GR45.116N13F010420 GR45 Triticum aestivum cDNA clone GR45116N13,
mRNA sequence
Length = 689
Score = 44.1 bits (22), Expect = 0.011
Identities = 29/30 (96%), Gaps = 1/30 (3%)
Strand = Plus / Minus
Query: 338 gcgccgacgagcggcgcgttgatgtaggtg 367
||||||||||||||||||||| ||||||||
Sbjct: 687 gcgccgacgagcggcgcgttg-tgtaggtg 659
Score = 42.1 bits (21), Expect = 0.043
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 421 gtcgggtcccccgacgacggcaccgacgagcaggttg 457
|||||| || ||||||||||| |||||||||| ||||
Sbjct: 606 gtcggggccgccgacgacggcgccgacgagcacgttg 570
>gb|BQ246704.1|BQ246704 TaE15006G04R TaE15 Triticum aestivum cDNA clone TaE15006G04R, mRNA
sequence
Length = 539
Score = 40.1 bits (20), Expect = 0.17
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 575 gcgccgtagcccaccatgta 594
||||||||||||||||||||
Sbjct: 435 gcgccgtagcccaccatgta 416
>gb|CD896167.1|CD896167 G174.102A02F010822 G174 Triticum aestivum cDNA clone G174102A02,
mRNA sequence
Length = 425
Score = 40.1 bits (20), Expect = 0.17
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 516 ggtgcgccgccacggacggcagcgacga 543
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Sbjct: 52 ggtgcgcggccacggacggcatcgacga 25
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 123,615
Number of Sequences: 636343
Number of extensions: 123615
Number of successful extensions: 33473
Number of sequences better than 0.5: 25
Number of HSP's better than 0.5 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33409
Number of HSP's gapped (non-prelim): 64
length of query: 594
length of database: 367,240,239
effective HSP length: 19
effective length of query: 575
effective length of database: 355,149,722
effective search space: 204211090150
effective search space used: 204211090150
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)