BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2494085.2.4
(645 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE401878.1|BE401878 CSB002B04F990908 ITEC CSB Wheat Endo... 56 3e-006
gb|BE423872.1|BE423872 WHE0067_F01_K01ZS Wheat endosperm cD... 56 3e-006
gb|BE424369.1|BE424369 WHE0083_A08_A15ZS Wheat endosperm cD... 56 3e-006
gb|BJ233263.1|BJ233263 BJ233263 Y. Ogihara unpublished cDNA... 56 3e-006
gb|BJ233499.1|BJ233499 BJ233499 Y. Ogihara unpublished cDNA... 56 3e-006
gb|BJ233662.1|BJ233662 BJ233662 Y. Ogihara unpublished cDNA... 56 3e-006
gb|BJ234513.1|BJ234513 BJ234513 Y. Ogihara unpublished cDNA... 56 3e-006
gb|BJ235795.1|BJ235795 BJ235795 Y. Ogihara unpublished cDNA... 56 3e-006
gb|BJ237114.1|BJ237114 BJ237114 Y. Ogihara unpublished cDNA... 56 3e-006
gb|BJ238911.1|BJ238911 BJ238911 Y. Ogihara unpublished cDNA... 56 3e-006
gb|BJ239148.1|BJ239148 BJ239148 Y. Ogihara unpublished cDNA... 56 3e-006
gb|BJ239276.1|BJ239276 BJ239276 Y. Ogihara unpublished cDNA... 56 3e-006
gb|BJ239521.1|BJ239521 BJ239521 Y. Ogihara unpublished cDNA... 56 3e-006
gb|BJ241010.1|BJ241010 BJ241010 Y. Ogihara unpublished cDNA... 56 3e-006
gb|BJ242665.1|BJ242665 BJ242665 Y. Ogihara unpublished cDNA... 56 3e-006
gb|BJ288317.1|BJ288317 BJ288317 Y. Ogihara unpublished cDNA... 56 3e-006
gb|BJ294645.1|BJ294645 BJ294645 Y. Ogihara unpublished cDNA... 56 3e-006
gb|BQ607532.1|BQ607532 BRY_3426 wheat EST endosperm library... 56 3e-006
gb|BQ608331.1|BQ608331 BRY_4235 wheat EST endosperm library... 56 3e-006
gb|BQ804174.1|BQ804174 WHE3551_C09_E17ZS Wheat developing g... 56 3e-006
gb|BQ804687.1|BQ804687 WHE3557_F05_L09ZS Wheat developing g... 56 3e-006
gb|BQ805622.1|BQ805622 WHE3569_A03_B05ZS Wheat developing g... 56 3e-006
gb|BQ805625.1|BQ805625 WHE3569_B09_D17ZS Wheat developing g... 56 3e-006
gb|BQ806461.1|BQ806461 WHE3579_C12_E23ZS Wheat developing g... 56 3e-006
gb|CA707333.1|CA707333 wdk2c.pk005.e8 wdk2c Triticum aestiv... 56 3e-006
gb|CA714209.1|CA714209 wdk3c.pk018.g1 wdk3c Triticum aestiv... 56 3e-006
gb|CA714643.1|CA714643 wdk3c.pk023.b6 wdk3c Triticum aestiv... 56 3e-006
gb|CA715033.1|CA715033 wdk3c.pk022.o12 wdk3c Triticum aesti... 56 3e-006
gb|CA718063.1|CA718063 wdk5c.pk0001.b11 wdk5c Triticum aest... 56 3e-006
gb|CA721509.1|CA721509 wdk9n.pk001.d4 wdk9n Triticum aestiv... 56 3e-006
gb|CA721826.1|CA721826 wdk9n1.pk001.g16 wdk9n1 Triticum aes... 56 3e-006
gb|CA734286.1|CA734286 wde2f.pk002.i19 wde2f Triticum aesti... 56 3e-006
gb|CD901562.1|CD901562 G356.104C07F010918 G356 Triticum aes... 56 3e-006
gb|CD901867.1|CD901867 G356.105D06F010918 G356 Triticum aes... 56 3e-006
gb|CD903813.1|CD903813 G356.111I05F010919 G356 Triticum aes... 56 3e-006
gb|CD904470.1|CD904470 G356.113M02F010920 G356 Triticum aes... 56 3e-006
gb|CD907289.1|CD907289 G468.106I03F010810 G468 Triticum aes... 56 3e-006
gb|CD914438.1|CD914438 G550.122H04F010712 G550 Triticum aes... 56 3e-006
gb|CD921761.1|CD921761 G750.001O09F010309 G750 Triticum aes... 56 3e-006
gb|CV064962.1|CV064962 WNEL17e12 Wheat EST endosperm librar... 56 3e-006
gb|CV065676.1|CV065676 WNEL25c3 Wheat EST endosperm library... 56 3e-006
gb|CV065846.1|CV065846 WNEL27d10 Wheat EST endosperm librar... 56 3e-006
gb|CV066083.1|CV066083 WNEL2e6 Wheat EST endosperm library ... 56 3e-006
gb|BT008935.1| Triticum aestivum clone wde2f.pk002.i19:fis,... 56 3e-006
gb|BT009025.1| Triticum aestivum clone wdk3c.pk018.g1:fis, ... 56 3e-006
gb|CA618928.1|CA618928 wl1n.pk0042.d3 wl1n Triticum aestivu... 50 2e-004
gb|BT009138.1| Triticum aestivum clone wl1n.pk0042.d3:fis, ... 50 2e-004
gb|BF429197.1|BF429197 WHE1709_F04_K07ZS Wheat heat stresse... 48 8e-004
gb|BJ293047.1|BJ293047 BJ293047 Y. Ogihara unpublished cDNA... 48 8e-004
gb|BJ299436.1|BJ299436 BJ299436 Y. Ogihara unpublished cDNA... 48 8e-004
gb|BQ804264.1|BQ804264 WHE3552_D06_G12ZS Wheat developing g... 48 8e-004
gb|CD901108.1|CD901108 G356.102M18F010913 G356 Triticum aes... 48 8e-004
gb|CD902205.1|CD902205 G356.106E12F010918 G356 Triticum aes... 48 8e-004
gb|CD903059.1|CD903059 G356.108P24F010919 G356 Triticum aes... 48 8e-004
gb|CD907271.1|CD907271 G468.106H15F010813 G468 Triticum aes... 48 8e-004
gb|CD907777.1|CD907777 G468.107P24F010814 G468 Triticum aes... 48 8e-004
gb|CD911339.1|CD911339 G550.110N14F010521 G550 Triticum aes... 48 8e-004
gb|CD912129.1|CD912129 G550.113F22F010522 G550 Triticum aes... 48 8e-004
gb|CD914528.1|CD914528 G550.122O16F010712 G550 Triticum aes... 48 8e-004
gb|CA712294.1|CA712294 wdk3c.pk005.i11 wdk3c Triticum aesti... 44 0.012
gb|BE399390.1|BE399390 WHE0035.F03F990516 ITEC WHE Wheat En... 42 0.046
gb|BE492384.1|BE492384 WHE0558_C03_C03ZE Triticum monococcu... 42 0.046
gb|BF428880.1|BF428880 WHE1710_E03_I06ZS Wheat heat stresse... 40 0.18
gb|AL825257.1|AL825257 AL825257 p:335 Triticum aestivum cDN... 40 0.18
gb|CD868763.1|CD868763 AZO2.109M13F001114 AZO2 Triticum aes... 40 0.18
gb|CD904112.1|CD904112 G356.112H15R011024 G356 Triticum aes... 40 0.18
gb|CK203284.1|CK203284 FGAS011811 Triticum aestivum FGAS: L... 40 0.18
gb|CK203630.1|CK203630 FGAS012162 Triticum aestivum FGAS: L... 40 0.18
>gb|BE401878.1|BE401878 CSB002B04F990908 ITEC CSB Wheat Endosperm Library Triticum aestivum
cDNA clone CSB002B04, mRNA sequence
Length = 420
Score = 56.0 bits (28), Expect = 3e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 294 tggtgcagaagcagcggtggcgtaggcccttgcacacgccgccggtgaaaccttcggtca 353
|||||||||||||||||||||| | ||| |||| |||||||| ||| || ||||||
Sbjct: 266 tggtgcagaagcagcggtggcggaagccgcggcacttgccgccggggaagccctcggtct 207
Query: 354 ggcagacgtttgcgcagttg 373
||||||||| |||||||||
Sbjct: 206 tgcagacgttggcgcagttg 187
>gb|BE423872.1|BE423872 WHE0067_F01_K01ZS Wheat endosperm cDNA library Triticum aestivum
cDNA clone WHE0067_F01_K01, mRNA sequence
Length = 410
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 169 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 212
>gb|BE424369.1|BE424369 WHE0083_A08_A15ZS Wheat endosperm cDNA library Triticum aestivum
cDNA clone WHE0083_A08_A15, mRNA sequence
Length = 509
Score = 56.0 bits (28), Expect = 3e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 294 tggtgcagaagcagcggtggcgtaggcccttgcacacgccgccggtgaaaccttcggtca 353
|||||||||||||||||||||| | ||| |||| |||||||| ||| || ||||||
Sbjct: 252 tggtgcagaagcagcggtggcggaagccgcggcacttgccgccggggaagccctcggtct 311
Query: 354 ggcagacgtttgcgcagttg 373
||||||||| |||||||||
Sbjct: 312 tgcagacgttggcgcagttg 331
>gb|BJ233263.1|BJ233263 BJ233263 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe3o20 5', mRNA sequence
Length = 448
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 231 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 188
>gb|BJ233499.1|BJ233499 BJ233499 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe4p20 5', mRNA sequence
Length = 489
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 260 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 217
>gb|BJ233662.1|BJ233662 BJ233662 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe6l09 5', mRNA sequence
Length = 464
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 247 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 204
>gb|BJ234513.1|BJ234513 BJ234513 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe5j18 5', mRNA sequence
Length = 492
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 229 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 186
>gb|BJ235795.1|BJ235795 BJ235795 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe18f19 5', mRNA sequence
Length = 462
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 233 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 190
>gb|BJ237114.1|BJ237114 BJ237114 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe24i03 5', mRNA sequence
Length = 417
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 200 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 157
>gb|BJ238911.1|BJ238911 BJ238911 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe3o20 3', mRNA sequence
Length = 413
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 181 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 224
>gb|BJ239148.1|BJ239148 BJ239148 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe4p20 3', mRNA sequence
Length = 417
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 170 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 213
>gb|BJ239276.1|BJ239276 BJ239276 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe5j18 3', mRNA sequence
Length = 466
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 213 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 256
>gb|BJ239521.1|BJ239521 BJ239521 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe6l09 3', mRNA sequence
Length = 452
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 205 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 248
>gb|BJ241010.1|BJ241010 BJ241010 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe18f19 3', mRNA sequence
Length = 444
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 209 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 252
>gb|BJ242665.1|BJ242665 BJ242665 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe24i03 3', mRNA sequence
Length = 436
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 204 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 247
>gb|BJ288317.1|BJ288317 BJ288317 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl13o15 5', mRNA sequence
Length = 420
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 191 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 148
>gb|BJ294645.1|BJ294645 BJ294645 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl13o15 3', mRNA sequence
Length = 361
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 181 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 224
>gb|BQ607532.1|BQ607532 BRY_3426 wheat EST endosperm library Triticum aestivum cDNA 5',
mRNA sequence
Length = 420
Score = 56.0 bits (28), Expect = 3e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 294 tggtgcagaagcagcggtggcgtaggcccttgcacacgccgccggtgaaaccttcggtca 353
|||||||||||||||||||||| | ||| |||| |||||||| ||| || ||||||
Sbjct: 266 tggtgcagaagcagcggtggcggaagccgcggcacttgccgccggggaagccctcggtct 207
Query: 354 ggcagacgtttgcgcagttg 373
||||||||| |||||||||
Sbjct: 206 tgcagacgttggcgcagttg 187
>gb|BQ608331.1|BQ608331 BRY_4235 wheat EST endosperm library Triticum aestivum cDNA 5',
mRNA sequence
Length = 494
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 247 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 204
>gb|BQ804174.1|BQ804174 WHE3551_C09_E17ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3551_C09_E17, mRNA sequence
Length = 460
Score = 56.0 bits (28), Expect = 3e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 294 tggtgcagaagcagcggtggcgtaggcccttgcacacgccgccggtgaaaccttcggtca 353
|||||||||||||||||||||| | ||| |||| |||||||| ||| || ||||||
Sbjct: 266 tggtgcagaagcagcggtggcggaagccgcggcacttgccgccggggaagccctcggtct 207
Query: 354 ggcagacgtttgcgcagttg 373
||||||||| |||||||||
Sbjct: 206 tgcagacgttggcgcagttg 187
>gb|BQ804687.1|BQ804687 WHE3557_F05_L09ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3557_F05_L09, mRNA sequence
Length = 477
Score = 56.0 bits (28), Expect = 3e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 294 tggtgcagaagcagcggtggcgtaggcccttgcacacgccgccggtgaaaccttcggtca 353
|||||||||||||||||||||| | ||| |||| |||||||| ||| || ||||||
Sbjct: 272 tggtgcagaagcagcggtggcggaagccgcggcacttgccgccggggaagccctcggtct 213
Query: 354 ggcagacgtttgcgcagttg 373
||||||||| |||||||||
Sbjct: 212 tgcagacgttggcgcagttg 193
>gb|BQ805622.1|BQ805622 WHE3569_A03_B05ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3569_A03_B05, mRNA sequence
Length = 525
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 249 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 206
>gb|BQ805625.1|BQ805625 WHE3569_B09_D17ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3569_B09_D17, mRNA sequence
Length = 562
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 264 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 221
>gb|BQ806461.1|BQ806461 WHE3579_C12_E23ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3579_C12_E23, mRNA sequence
Length = 450
Score = 56.0 bits (28), Expect = 3e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 294 tggtgcagaagcagcggtggcgtaggcccttgcacacgccgccggtgaaaccttcggtca 353
|||||||||||||||||||||| | ||| |||| |||||||| ||| || ||||||
Sbjct: 258 tggtgcagaagcagcggtggcggaagccgcggcacttgccgccggggaagccctcggtct 199
Query: 354 ggcagacgtttgcgcagttg 373
||||||||| |||||||||
Sbjct: 198 tgcagacgttggcgcagttg 179
>gb|CA707333.1|CA707333 wdk2c.pk005.e8 wdk2c Triticum aestivum cDNA clone wdk2c.pk005.e8 5'
end, mRNA sequence
Length = 431
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 191 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 148
>gb|CA714209.1|CA714209 wdk3c.pk018.g1 wdk3c Triticum aestivum cDNA clone wdk3c.pk018.g1 5'
end, mRNA sequence
Length = 474
Score = 56.0 bits (28), Expect = 3e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 294 tggtgcagaagcagcggtggcgtaggcccttgcacacgccgccggtgaaaccttcggtca 353
|||||||||||||||||||||| | ||| |||| |||||||| ||| || ||||||
Sbjct: 269 tggtgcagaagcagcggtggcggaagccgcggcacttgccgccggggaagccctcggtct 210
Query: 354 ggcagacgtttgcgcagttg 373
||||||||| |||||||||
Sbjct: 209 tgcagacgttggcgcagttg 190
>gb|CA714643.1|CA714643 wdk3c.pk023.b6 wdk3c Triticum aestivum cDNA clone wdk3c.pk023.b6 5'
end, mRNA sequence
Length = 459
Score = 56.0 bits (28), Expect = 3e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 294 tggtgcagaagcagcggtggcgtaggcccttgcacacgccgccggtgaaaccttcggtca 353
|||||||||||||||||||||| | ||| |||| |||||||| ||| || ||||||
Sbjct: 262 tggtgcagaagcagcggtggcggaagccgcggcacttgccgccggggaagccctcggtct 203
Query: 354 ggcagacgtttgcgcagttg 373
||||||||| |||||||||
Sbjct: 202 tgcagacgttggcgcagttg 183
>gb|CA715033.1|CA715033 wdk3c.pk022.o12 wdk3c Triticum aestivum cDNA clone wdk3c.pk022.o12
5' end, mRNA sequence
Length = 362
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 235 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 278
>gb|CA718063.1|CA718063 wdk5c.pk0001.b11 wdk5c Triticum aestivum cDNA clone
wdk5c.pk0001.b11 5' end, mRNA sequence
Length = 490
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 191 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 234
>gb|CA721509.1|CA721509 wdk9n.pk001.d4 wdk9n Triticum aestivum cDNA clone wdk9n.pk001.d4 5'
end, mRNA sequence
Length = 440
Score = 56.0 bits (28), Expect = 3e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 294 tggtgcagaagcagcggtggcgtaggcccttgcacacgccgccggtgaaaccttcggtca 353
|||||||||||||||||||||| | ||| |||| |||||||| ||| || ||||||
Sbjct: 264 tggtgcagaagcagcggtggcggaagccgcggcacttgccgccggggaagccctcggtct 205
Query: 354 ggcagacgtttgcgcagttg 373
||||||||| |||||||||
Sbjct: 204 tgcagacgttggcgcagttg 185
>gb|CA721826.1|CA721826 wdk9n1.pk001.g16 wdk9n1 Triticum aestivum cDNA clone
wdk9n1.pk001.g16 5' end, mRNA sequence
Length = 448
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 194 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 237
>gb|CA734286.1|CA734286 wde2f.pk002.i19 wde2f Triticum aestivum cDNA clone wde2f.pk002.i19
5' end, mRNA sequence
Length = 460
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 243 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 200
>gb|CD901562.1|CD901562 G356.104C07F010918 G356 Triticum aestivum cDNA clone G356104C07,
mRNA sequence
Length = 454
Score = 56.0 bits (28), Expect = 3e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 294 tggtgcagaagcagcggtggcgtaggcccttgcacacgccgccggtgaaaccttcggtca 353
|||||||||||||||||||||| | ||| |||| |||||||| ||| || ||||||
Sbjct: 283 tggtgcagaagcagcggtggcggaagccgcggcacttgccgccggggaagccctcggtct 224
Query: 354 ggcagacgtttgcgcagttg 373
||||||||| |||||||||
Sbjct: 223 tgcagacgttggcgcagttg 204
>gb|CD901867.1|CD901867 G356.105D06F010918 G356 Triticum aestivum cDNA clone G356105D06,
mRNA sequence
Length = 523
Score = 56.0 bits (28), Expect = 3e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 294 tggtgcagaagcagcggtggcgtaggcccttgcacacgccgccggtgaaaccttcggtca 353
|||||||||||||||||||||| | ||| |||| |||||||| ||| || ||||||
Sbjct: 282 tggtgcagaagcagcggtggcggaagccgcggcacttgccgccggggaagccctcggtct 223
Query: 354 ggcagacgtttgcgcagttg 373
||||||||| |||||||||
Sbjct: 222 tgcagacgttggcgcagttg 203
>gb|CD903813.1|CD903813 G356.111I05F010919 G356 Triticum aestivum cDNA clone G356111I05,
mRNA sequence
Length = 468
Score = 56.0 bits (28), Expect = 3e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 294 tggtgcagaagcagcggtggcgtaggcccttgcacacgccgccggtgaaaccttcggtca 353
|||||||||||||||||||||| | ||| |||| |||||||| ||| || ||||||
Sbjct: 300 tggtgcagaagcagcggtggcggaagccgcggcacttgccgccggggaagccctcggtct 241
Query: 354 ggcagacgtttgcgcagttg 373
||||||||| |||||||||
Sbjct: 240 tgcagacgttggcgcagttg 221
>gb|CD904470.1|CD904470 G356.113M02F010920 G356 Triticum aestivum cDNA clone G356113M02,
mRNA sequence
Length = 569
Score = 56.0 bits (28), Expect = 3e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 294 tggtgcagaagcagcggtggcgtaggcccttgcacacgccgccggtgaaaccttcggtca 353
|||||||||||||||||||||| | ||| |||| |||||||| ||| || ||||||
Sbjct: 324 tggtgcagaagcagcggtggcggaagccgcggcacttgccgccggggaagccctcggtct 265
Query: 354 ggcagacgtttgcgcagttg 373
||||||||| |||||||||
Sbjct: 264 tgcagacgttggcgcagttg 245
>gb|CD907289.1|CD907289 G468.106I03F010810 G468 Triticum aestivum cDNA clone G468106I03,
mRNA sequence
Length = 487
Score = 56.0 bits (28), Expect = 3e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 294 tggtgcagaagcagcggtggcgtaggcccttgcacacgccgccggtgaaaccttcggtca 353
|||||||||||||||||||||| | ||| |||| |||||||| ||| || ||||||
Sbjct: 276 tggtgcagaagcagcggtggcggaagccgcggcacttgccgccggggaagccctcggtct 217
Query: 354 ggcagacgtttgcgcagttg 373
||||||||| |||||||||
Sbjct: 216 tgcagacgttggcgcagttg 197
>gb|CD914438.1|CD914438 G550.122H04F010712 G550 Triticum aestivum cDNA clone G550122H04,
mRNA sequence
Length = 433
Score = 56.0 bits (28), Expect = 3e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 294 tggtgcagaagcagcggtggcgtaggcccttgcacacgccgccggtgaaaccttcggtca 353
|||||||||||||||||||||| | ||| |||| |||||||| ||| || ||||||
Sbjct: 201 tggtgcagaagcagcggtggcggaagccgcggcacttgccgccggggaagccctcggtct 142
Query: 354 ggcagacgtttgcgcagttg 373
||||||||| |||||||||
Sbjct: 141 tgcagacgttggcgcagttg 122
>gb|CD921761.1|CD921761 G750.001O09F010309 G750 Triticum aestivum cDNA clone G750001O09,
mRNA sequence
Length = 530
Score = 56.0 bits (28), Expect = 3e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 294 tggtgcagaagcagcggtggcgtaggcccttgcacacgccgccggtgaaaccttcggtca 353
|||||||||||||||||||||| | ||| |||| |||||||| ||| || ||||||
Sbjct: 292 tggtgcagaagcagcggtggcggaagccgcggcacttgccgccggggaagccctcggtct 233
Query: 354 ggcagacgtttgcgcagttg 373
||||||||| |||||||||
Sbjct: 232 tgcagacgttggcgcagttg 213
>gb|CV064962.1|CV064962 WNEL17e12 Wheat EST endosperm library Triticum aestivum cDNA clone
WNEL17e12 5' similar to Triticum aestivum clone
wde2f.pk002.i19:fis, full insert mRNA sequence
Length = 431
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 158 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 115
>gb|CV065676.1|CV065676 WNEL25c3 Wheat EST endosperm library Triticum aestivum cDNA clone
WNEL25c3 5' similar to Triticum aestivum clone
wde2f.pk002.i19:fis, full insert mRNA sequence
Length = 399
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 135 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 92
>gb|CV065846.1|CV065846 WNEL27d10 Wheat EST endosperm library Triticum aestivum cDNA clone
WNEL27d10 5' similar to Triticum aestivum clone
wde2f.pk002.i19:fis, full insert mRNA sequence
Length = 435
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 170 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 127
>gb|CV066083.1|CV066083 WNEL2e6 Wheat EST endosperm library Triticum aestivum cDNA clone
WNEL2e6 5' similar to Triticum aestivum clone
wde2f.pk002.i19:fis, full insert mRNA sequence
Length = 440
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 212 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 169
>gb|BT008935.1| Triticum aestivum clone wde2f.pk002.i19:fis, full insert mRNA
sequence
Length = 507
Score = 56.0 bits (28), Expect = 3e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 331 gccgccggtgaaaccttcggtcaggcagacgtttgcgcagttgg 374
|||||||||||| || |||||| |||||||||| ||||||||||
Sbjct: 243 gccgccggtgaagccctcggtctggcagacgttcgcgcagttgg 200
>gb|BT009025.1| Triticum aestivum clone wdk3c.pk018.g1:fis, full insert mRNA
sequence
Length = 988
Score = 56.0 bits (28), Expect = 3e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 294 tggtgcagaagcagcggtggcgtaggcccttgcacacgccgccggtgaaaccttcggtca 353
|||||||||||||||||||||| | ||| |||| |||||||| ||| || ||||||
Sbjct: 271 tggtgcagaagcagcggtggcggaagccgcggcacttgccgccggggaagccctcggtct 212
Query: 354 ggcagacgtttgcgcagttg 373
||||||||| |||||||||
Sbjct: 211 tgcagacgttggcgcagttg 192
>gb|CA618928.1|CA618928 wl1n.pk0042.d3 wl1n Triticum aestivum cDNA clone wl1n.pk0042.d3 5'
end, mRNA sequence
Length = 553
Score = 50.1 bits (25), Expect = 2e-004
Identities = 67/81 (82%)
Strand = Plus / Minus
Query: 294 tggtgcagaagcagcggtggcgtaggcccttgcacacgccgccggtgaaaccttcggtca 353
||||||||||||||||| |||| | ||| |||| |||||||| ||| || ||||||
Sbjct: 292 tggtgcagaagcagcggcggcggaagccgcggcacctgccgccggggaacccctcggtcc 233
Query: 354 ggcagacgtttgcgcagttgg 374
||||||||| ||||||||||
Sbjct: 232 tgcagacgttggcgcagttgg 212
>gb|BT009138.1| Triticum aestivum clone wl1n.pk0042.d3:fis, full insert mRNA
sequence
Length = 587
Score = 50.1 bits (25), Expect = 2e-004
Identities = 67/81 (82%)
Strand = Plus / Minus
Query: 294 tggtgcagaagcagcggtggcgtaggcccttgcacacgccgccggtgaaaccttcggtca 353
||||||||||||||||| |||| | ||| |||| |||||||| ||| || ||||||
Sbjct: 299 tggtgcagaagcagcggcggcggaagccgcggcacctgccgccggggaacccctcggtcc 240
Query: 354 ggcagacgtttgcgcagttgg 374
||||||||| ||||||||||
Sbjct: 239 tgcagacgttggcgcagttgg 219
>gb|BF429197.1|BF429197 WHE1709_F04_K07ZS Wheat heat stressed spike cDNA library Triticum
aestivum cDNA clone WHE1709_F04_K07, mRNA sequence
Length = 458
Score = 48.1 bits (24), Expect = 8e-004
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 294 tggtgcagaagcagcggtggcgtaggcccttgcacacgccgccggtgaaaccttcggtca 353
|||||||||||||||||||||| | ||| |||| |||||||| ||| || ||||||
Sbjct: 246 tggtgcagaagcagcggtggcggaagccgcggcacttgccgccggggaagccctcggtct 187
Query: 354 ggcagacgtttgcgcagttg 373
||||||||| | |||||||
Sbjct: 186 tgcagacgttggagcagttg 167
>gb|BJ293047.1|BJ293047 BJ293047 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl30g06 5', mRNA sequence
Length = 460
Score = 48.1 bits (24), Expect = 8e-004
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 294 tggtgcagaagcagcggtggcgtaggcccttgcacacgccgccggtgaaaccttcggtca 353
|||||||||||||||| ||||| | ||| |||| |||||||| ||| || ||||||
Sbjct: 252 tggtgcagaagcagcgatggcggaagccgcggcacttgccgccggggaagccctcggtct 193
Query: 354 ggcagacgtttgcgcagttg 373
||||||||| |||||||||
Sbjct: 192 tgcagacgttggcgcagttg 173
>gb|BJ299436.1|BJ299436 BJ299436 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl30g06 3', mRNA sequence
Length = 381
Score = 48.1 bits (24), Expect = 8e-004
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 294 tggtgcagaagcagcggtggcgtaggcccttgcacacgccgccggtgaaaccttcggtca 353
|||||||||||||||| ||||| | ||| |||| |||||||| ||| || ||||||
Sbjct: 144 tggtgcagaagcagcgatggcggaagccgcggcacttgccgccggggaagccctcggtct 203
Query: 354 ggcagacgtttgcgcagttg 373
||||||||| |||||||||
Sbjct: 204 tgcagacgttggcgcagttg 223
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 129,627
Number of Sequences: 636343
Number of extensions: 129627
Number of successful extensions: 40517
Number of sequences better than 0.5: 68
Number of HSP's better than 0.5 without gapping: 52
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 40420
Number of HSP's gapped (non-prelim): 113
length of query: 645
length of database: 367,240,239
effective HSP length: 19
effective length of query: 626
effective length of database: 355,149,722
effective search space: 222323725972
effective search space used: 222323725972
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)