BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493528.2.1
(627 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ252087.1|BJ252087 BJ252087 Y. Ogihara unpublished cDNA... 484 e-135
gb|CD906855.1|CD906855 G468.105J10R010929 G468 Triticum aes... 484 e-135
gb|BG314573.1|BG314573 WHE2488_F10_K20ZS Triticum monococcu... 476 e-133
gb|CA743285.1|CA743285 wri1s.pk002.m14 wri1s Triticum aesti... 472 e-131
gb|CK208709.1|CK208709 FGAS020425 Triticum aestivum FGAS: L... 460 e-128
gb|BJ208172.1|BJ208172 BJ208172 Y. Ogihara unpublished cDNA... 389 e-106
gb|AL811396.1|AL811396 AL811396 d:37 Triticum aestivum cDNA... 377 e-103
gb|AL819246.1|AL819246 AL819246 n:129 Triticum aestivum cDN... 353 9e-096
gb|BJ215444.1|BJ215444 BJ215444 Y. Ogihara unpublished cDNA... 343 9e-093
gb|BJ246162.1|BJ246162 BJ246162 Y. Ogihara unpublished cDNA... 254 6e-066
gb|CV775826.1|CV775826 FGAS070230 Triticum aestivum FGAS: L... 230 9e-059
gb|CA627779.1|CA627779 wdr1.pk0005.g12 wdr1 Triticum aestiv... 210 9e-053
gb|CA695514.1|CA695514 wlmk8.pk0010.g6 wlmk8 Triticum aesti... 208 3e-052
gb|BE400536.1|BE400536 AWB004.F10F000328 ITEC AWB Wheat Mei... 141 7e-032
gb|CA642381.1|CA642381 wre1n.pk0054.b11 wre1n Triticum aest... 115 4e-024
gb|CA681396.1|CA681396 wlm24.pk0020.f7 wlm24 Triticum aesti... 82 5e-014
gb|CK162605.1|CK162605 FGAS015203 Triticum aestivum FGAS: L... 42 0.045
gb|BG908401.1|BG908401 TaLr1167G04R TaLr1 Triticum aestivum... 40 0.18
>gb|BJ252087.1|BJ252087 BJ252087 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf21l24 3', mRNA sequence
Length = 598
Score = 484 bits (244), Expect = e-135
Identities = 457/528 (86%)
Strand = Plus / Plus
Query: 58 ccagctaattgactaacacttgagctcagtaaagtattgatctctccaattatatacact 117
|||||||| |||||||||||||| ||| ||||| |||| |||||||||||||||| ||||
Sbjct: 57 ccagctaactgactaacacttgaactcggtaaattattaatctctccaattatatgcact 116
Query: 118 ggtcttccatcaaaaacagacgacagtgtcgactcacacagcttctttagttcccttgtt 177
||||| | |||||| | ||| || || || | |||| | |||||||||||||||||||||
Sbjct: 117 ggtctgctatcaaacatagatgaaagcgttgcctcagagagcttctttagttcccttgtt 176
Query: 178 tttgtaattgctgcctcttgctttggccatgatgatgacagtgcgttttgcagctccata 237
||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||
Sbjct: 177 tttgtaattgctgcctcttgcttcggccaggatgatgatagtgcattttgcagctccata 236
Query: 238 cgcttaacagataaatcacctaaaccttcccgtagttttacttcgtgatgcttcttctct 297
|||||||| |||||||||||||| ||||| || ||||| || || ||||| ||||| ||
Sbjct: 237 cgcttaactgataaatcacctaagccttctcgcagtttcacctcatgatgtttcttttcc 296
Query: 298 tctaagcttgaaactaatctatccagaaaccttttagagttaaggatcattataaggtca 357
|||||| |||| |||||||| |||| ||||||||||||||| ||||||||||||||||||
Sbjct: 297 tctaaggttgacactaatctgtccaaaaaccttttagagttgaggatcattataaggtca 356
Query: 358 agagtcttctgattagttagcaatgagattgctgacgagatctctacaagcatgttctcc 417
||||| ||||| || || |||| ||||||||||| || | || |||||||| ||||||
Sbjct: 357 agagttttctggttggtgagcagagagattgctgaggaaacttccacaagcatattctcc 416
Query: 418 aaactgtcaggagcatgctgctggagaacaaaaggtgagacagcttgcacttgatgctgt 477
|||| ||||||| || ||| |||||||| ||||||||||| |||||||| |||||||||
Sbjct: 417 aaacgttcaggagtatactgttggagaacgaaaggtgagactgcttgcacctgatgctgt 476
Query: 478 agagatgatgtgtctgcattcctcatctcccctaagcgttgagtcaaaaatgattttacc 537
||||||||||| || ||||| ||||||||| || |||| | |||||||||||||||||
Sbjct: 477 agagatgatgtatcagcatttctcatctccgctgagcgcaggatcaaaaatgattttacc 536
Query: 538 tcgagtaaatcatccagaatattattcctatattctttctccagcaac 585
|| |||||||||||||| |||||||| || || || ||||||||||||
Sbjct: 537 tcaagtaaatcatccaggatattatttctgtactccttctccagcaac 584
>gb|CD906855.1|CD906855 G468.105J10R010929 G468 Triticum aestivum cDNA clone G468105J10,
mRNA sequence
Length = 691
Score = 484 bits (244), Expect = e-135
Identities = 457/528 (86%)
Strand = Plus / Plus
Query: 58 ccagctaattgactaacacttgagctcagtaaagtattgatctctccaattatatacact 117
|||||||| |||||||||||||| ||| ||||| |||| |||||||||||||||| ||||
Sbjct: 110 ccagctaactgactaacacttgaactcggtaaattattaatctctccaattatatgcact 169
Query: 118 ggtcttccatcaaaaacagacgacagtgtcgactcacacagcttctttagttcccttgtt 177
||||| | |||||| | ||| || || || | |||| | |||||||||||||||||||||
Sbjct: 170 ggtctgctatcaaacatagatgaaagcgttgcctcagagagcttctttagttcccttgtt 229
Query: 178 tttgtaattgctgcctcttgctttggccatgatgatgacagtgcgttttgcagctccata 237
||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||
Sbjct: 230 tttgtaattgctgcctcttgcttcggccaggatgatgatagtgcattttgcagctccata 289
Query: 238 cgcttaacagataaatcacctaaaccttcccgtagttttacttcgtgatgcttcttctct 297
|||||||| |||||||||||||| ||||| || ||||| || || ||||| ||||| ||
Sbjct: 290 cgcttaactgataaatcacctaagccttctcgcagtttcacctcatgatgtttcttttcc 349
Query: 298 tctaagcttgaaactaatctatccagaaaccttttagagttaaggatcattataaggtca 357
|||||| |||| |||||||| |||| ||||||||||||||| ||||||||||||||||||
Sbjct: 350 tctaaggttgacactaatctgtccaaaaaccttttagagttgaggatcattataaggtca 409
Query: 358 agagtcttctgattagttagcaatgagattgctgacgagatctctacaagcatgttctcc 417
||||| ||||| || || |||| ||||||||||| || | || |||||||| ||||||
Sbjct: 410 agagttttctggttggtgagcagagagattgctgaggaaacttccacaagcatattctcc 469
Query: 418 aaactgtcaggagcatgctgctggagaacaaaaggtgagacagcttgcacttgatgctgt 477
|||| ||||||| || ||| |||||||| ||||||||||| |||||||| |||||||||
Sbjct: 470 aaacgttcaggagtatactgttggagaacgaaaggtgagactgcttgcacctgatgctgt 529
Query: 478 agagatgatgtgtctgcattcctcatctcccctaagcgttgagtcaaaaatgattttacc 537
||||||||||| || ||||| ||||||||| || |||| | |||||||||||||||||
Sbjct: 530 agagatgatgtatcagcatttctcatctccgctgagcgcaggatcaaaaatgattttacc 589
Query: 538 tcgagtaaatcatccagaatattattcctatattctttctccagcaac 585
|| |||||||||||||| |||||||| || || || ||||||||||||
Sbjct: 590 tcaagtaaatcatccaggatattatttctgtactccttctccagcaac 637
>gb|BG314573.1|BG314573 WHE2488_F10_K20ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2488_F10_K20,
mRNA sequence
Length = 653
Score = 476 bits (240), Expect = e-133
Identities = 456/528 (86%)
Strand = Plus / Plus
Query: 58 ccagctaattgactaacacttgagctcagtaaagtattgatctctccaattatatacact 117
|||||||| |||||||||||||| ||||||||| |||| |||||||||||||||| ||||
Sbjct: 89 ccagctaactgactaacacttgaactcagtaaattattaatctctccaattatatgcact 148
Query: 118 ggtcttccatcaaaaacagacgacagtgtcgactcacacagcttctttagttcccttgtt 177
||||| | ||| || | ||| || ||||| | |||| | |||||||||||||||||||||
Sbjct: 149 ggtctgctatcgaacatagatgaaagtgttgcctcagagagcttctttagttcccttgtt 208
Query: 178 tttgtaattgctgcctcttgctttggccatgatgatgacagtgcgttttgcagctccata 237
||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||
Sbjct: 209 tttgtaattgctgcctcttgcttcggccaggatgatgatagtgcattttgcagctccata 268
Query: 238 cgcttaacagataaatcacctaaaccttcccgtagttttacttcgtgatgcttcttctct 297
|||||||| |||||||||||||| ||||| || ||||| || || ||||| ||||| ||
Sbjct: 269 cgcttaactgataaatcacctaagccttctcgcagtttcacctcatgatgtttcttttcc 328
Query: 298 tctaagcttgaaactaatctatccagaaaccttttagagttaaggatcattataaggtca 357
|||||| |||| |||||||| || | ||||||||||||||| ||||||||||||||||||
Sbjct: 329 tctaaggttgacactaatctgtctaaaaaccttttagagttgaggatcattataaggtca 388
Query: 358 agagtcttctgattagttagcaatgagattgctgacgagatctctacaagcatgttctcc 417
||||| ||||| || || |||| ||||||||||| || | || |||||||| ||||||
Sbjct: 389 agagttttctggttggtgagcagagagattgctgaggaaacttccacaagcatattctcc 448
Query: 418 aaactgtcaggagcatgctgctggagaacaaaaggtgagacagcttgcacttgatgctgt 477
|||| ||||||| || ||| |||||||| ||||||||||| |||||||| |||||||||
Sbjct: 449 aaacgttcaggagtatactgttggagaacgaaaggtgagactgcttgcacctgatgctgt 508
Query: 478 agagatgatgtgtctgcattcctcatctcccctaagcgttgagtcaaaaatgattttacc 537
||||||||||| || ||||| ||||||||| || |||| | |||||||||||||||||
Sbjct: 509 agagatgatgtatcagcatttctcatctccgctgagcgcaggatcaaaaatgattttacc 568
Query: 538 tcgagtaaatcatccagaatattattcctatattctttctccagcaac 585
|| || ||||||||||| |||||||| || || || ||||||||||||
Sbjct: 569 tcaagcaaatcatccaggatattatttctgtactccttctccagcaac 616
>gb|CA743285.1|CA743285 wri1s.pk002.m14 wri1s Triticum aestivum cDNA clone wri1s.pk002.m14
5' end, mRNA sequence
Length = 570
Score = 472 bits (238), Expect = e-131
Identities = 439/506 (86%)
Strand = Plus / Plus
Query: 58 ccagctaattgactaacacttgagctcagtaaagtattgatctctccaattatatacact 117
|||||||| |||||||||||||| ||||||||| |||| |||||||||||||||| ||||
Sbjct: 39 ccagctaactgactaacacttgaactcagtaaattattaatctctccaattatatgcact 98
Query: 118 ggtcttccatcaaaaacagacgacagtgtcgactcacacagcttctttagttcccttgtt 177
||||| | ||| || | ||| || || || | |||||| ||||| |||||||||||||||
Sbjct: 99 ggtctgctatcgaacatagatgaaagcgttgcctcacagagcttatttagttcccttgtt 158
Query: 178 tttgtaattgctgcctcttgctttggccatgatgatgacagtgcgttttgcagctccata 237
|||| |||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||
Sbjct: 159 tttgcaattgctgcctcttgcttcggccaggatgatgatagtgcattttgcagctccata 218
Query: 238 cgcttaacagataaatcacctaaaccttcccgtagttttacttcgtgatgcttcttctct 297
|||||||| |||||||||||||| ||||| || ||||| || || ||||| ||||| ||
Sbjct: 219 cgcttaactgataaatcacctaagccttctcgcagtttcacctcatgatgtttcttttcc 278
Query: 298 tctaagcttgaaactaatctatccagaaaccttttagagttaaggatcattataaggtca 357
|||||| |||| || ||||| |||| ||||||||||||||| ||||||||||||||||||
Sbjct: 279 tctaaggttgacaccaatctctccaaaaaccttttagagttgaggatcattataaggtca 338
Query: 358 agagtcttctgattagttagcaatgagattgctgacgagatctctacaagcatgttctcc 417
||||| ||||| || || |||| ||||||||||| || | ||||||||||| ||||||
Sbjct: 339 agagttttctggttggtgagcagagagattgctgaggaaacttctacaagcatattctcc 398
Query: 418 aaactgtcaggagcatgctgctggagaacaaaaggtgagacagcttgcacttgatgctgt 477
|||| |||||||||| ||| |||||||| ||||||||||| |||||||| |||||||||
Sbjct: 399 aaacgttcaggagcatactgttggagaacgaaaggtgagactgcttgcacctgatgctgt 458
Query: 478 agagatgatgtgtctgcattcctcatctcccctaagcgttgagtcaaaaatgattttacc 537
||||||||||| || ||||| ||||||||| || |||| | |||||||||||||||||
Sbjct: 459 agagatgatgtatcagcatttctcatctccgctgagcgcaggatcaaaaatgattttacc 518
Query: 538 tcgagtaaatcatccagaatattatt 563
|| |||||||||||||| ||||||||
Sbjct: 519 tcaagtaaatcatccaggatattatt 544
>gb|CK208709.1|CK208709 FGAS020425 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1070
Score = 460 bits (232), Expect = e-128
Identities = 454/528 (85%)
Strand = Plus / Minus
Query: 58 ccagctaattgactaacacttgagctcagtaaagtattgatctctccaattatatacact 117
|||||||| |||||||||||||| ||||||||| |||| |||||||| ||||||| ||||
Sbjct: 566 ccagctaactgactaacacttgaactcagtaaattattaatctctccgattatatgcact 507
Query: 118 ggtcttccatcaaaaacagacgacagtgtcgactcacacagcttctttagttcccttgtt 177
||||| | ||| || | ||| || || || | |||| | |||||||||||||||||||||
Sbjct: 506 ggtctgctatcgaacatagatgaaagcgttgcctcagagagcttctttagttcccttgtt 447
Query: 178 tttgtaattgctgcctcttgctttggccatgatgatgacagtgcgttttgcagctccata 237
||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||
Sbjct: 446 tttgtaattgctgcctcttgcttcggccaggatgatgatagtgcattttgcagctccata 387
Query: 238 cgcttaacagataaatcacctaaaccttcccgtagttttacttcgtgatgcttcttctct 297
|||||||| || ||||||||||| ||||| || ||||| || || ||||| ||||| ||
Sbjct: 386 cgcttaactgacaaatcacctaagccttctcgcagtttcacctcatgatgtttcttttcc 327
Query: 298 tctaagcttgaaactaatctatccagaaaccttttagagttaaggatcattataaggtca 357
|||||| |||| || ||||| |||| ||||||||||||||| ||||||||||||||||||
Sbjct: 326 tctaaggttgacaccaatctgtccaaaaaccttttagagttgaggatcattataaggtca 267
Query: 358 agagtcttctgattagttagcaatgagattgctgacgagatctctacaagcatgttctcc 417
||||| ||||| || || |||| ||||||||||| || | ||||||||||| ||||||
Sbjct: 266 agagttttctggttggtgagcagagagattgctgaggaaacttctacaagcatattctcc 207
Query: 418 aaactgtcaggagcatgctgctggagaacaaaaggtgagacagcttgcacttgatgctgt 477
|||| |||||||||| ||| |||||||| ||||||||||| |||||||| |||||||||
Sbjct: 206 aaacgttcaggagcatactgttggagaacgaaaggtgagactgcttgcacctgatgctgt 147
Query: 478 agagatgatgtgtctgcattcctcatctcccctaagcgttgagtcaaaaatgattttacc 537
||||||||||| || ||||| ||||||||| || |||| | |||||||||||||||||
Sbjct: 146 agagatgatgtatcagcatttctcatctccgctgagcgcaggatcaaaaatgattttacc 87
Query: 538 tcgagtaaatcatccagaatattattcctatattctttctccagcaac 585
|| ||||||||||||| |||||| | || || || ||||||||||||
Sbjct: 86 tcaagtaaatcatccacgatattaattctgtactcgttctccagcaac 39
>gb|BJ208172.1|BJ208172 BJ208172 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh7b11 5', mRNA sequence
Length = 535
Score = 389 bits (196), Expect = e-106
Identities = 358/412 (86%)
Strand = Plus / Minus
Query: 170 cccttgtttttgtaattgctgcctcttgctttggccatgatgatgacagtgcgttttgca 229
|||||||||||| |||||||||||||||||| ||||| |||||||| ||||| |||||||
Sbjct: 535 cccttgtttttgcaattgctgcctcttgcttcggccaggatgatgatagtgcattttgca 476
Query: 230 gctccatacgcttaacagataaatcacctaaaccttcccgtagttttacttcgtgatgct 289
|||||||||||||||| |||||||||||||| ||||| || ||||| || || ||||| |
Sbjct: 475 gctccatacgcttaactgataaatcacctaagccttctcgcagtttcacctcatgatgtt 416
Query: 290 tcttctcttctaagcttgaaactaatctatccagaaaccttttagagttaaggatcatta 349
|||| || |||||| |||| || ||||| |||| ||||||||||||||| ||||||||||
Sbjct: 415 tcttttcctctaaggttgacaccaatctctccaaaaaccttttagagttgaggatcatta 356
Query: 350 taaggtcaagagtcttctgattagttagcaatgagattgctgacgagatctctacaagca 409
||||||||||||| ||||| || || |||| ||||||||||| || | ||||||||||
Sbjct: 355 taaggtcaagagttttctggttggtgagcagagagattgctgaggaaacttctacaagca 296
Query: 410 tgttctccaaactgtcaggagcatgctgctggagaacaaaaggtgagacagcttgcactt 469
| |||||||||| |||||||||| ||| |||||||| ||||||||||| |||||||| |
Sbjct: 295 tattctccaaacgttcaggagcatactgttggagaacgaaaggtgagactgcttgcacct 236
Query: 470 gatgctgtagagatgatgtgtctgcattcctcatctcccctaagcgttgagtcaaaaatg 529
||||||||||||||||||| || ||||| ||||||||| || |||| | |||||||||
Sbjct: 235 gatgctgtagagatgatgtatcagcatttctcatctccgctgagcgcaggatcaaaaatg 176
Query: 530 attttacctcgagtaaatcatccagaatattattcctatattctttctccag 581
|||||||||| |||||||||||||| |||||||| || || || ||||||||
Sbjct: 175 attttacctcaagtaaatcatccaggatattatttctgtactccttctccag 124
>gb|AL811396.1|AL811396 AL811396 d:37 Triticum aestivum cDNA clone D10_d37_plate_6_run_2,
mRNA sequence
Length = 534
Score = 377 bits (190), Expect = e-103
Identities = 372/431 (86%), Gaps = 2/431 (0%)
Strand = Plus / Minus
Query: 157 agcttctttagttcccttgtttttgtaattgctgcctcttgctttggccatgatgatgac 216
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 513 agcttctttagttcccttgtttttgtaattgctgcctcttgcttcggccaggatgatgat 454
Query: 217 agtgcgttttgcagctccatacgcttaacagataaatcacctaaaccttcccgtagtttt 276
||||| ||||||||||||||||||| ||| |||||||||||||| ||||| || |||||
Sbjct: 453 agtgcattttgcagctccatacgctnaactgataaatcacctaagccttctcgcagtttc 394
Query: 277 acttcgtgatgcttcttctcttctaagcttgaaactaatctatccagaaaccttttagag 336
|| || ||||| ||||| || |||||| |||| |||||||| |||| |||||||| ||||
Sbjct: 393 acctcatgatgtttcttttcctctaaggttgacactaatctgtccaaaaacctttnagag 334
Query: 337 ttaaggatcattataaggtcaagagtcttctgattagttagcaatgagattgctgacgag 396
|| |||||||| |||||||||||||| ||||| || || |||| ||||||||||| ||
Sbjct: 333 ttgaggatcatnataaggtcaagagttttctggttggtgagcagagagattgctgaggaa 274
Query: 397 atctctacaagcatgttctccaaactgtcaggagcatgctgctggagaacaaaaggtgag 456
| || |||||||| |||||||||| ||||||| || ||| |||||||| |||||||||
Sbjct: 273 acttccacaagcatattctccaaacgttcaggagtatactgttggagaacgaaaggtgag 214
Query: 457 acagcttgcacttgatgctgtagagatgatgtgtctgcattcctcatctcccctaagcgt 516
|| |||||||| |||||||||||||||||||| || ||||| ||||||||| || ||||
Sbjct: 213 actgcttgcacctgatgctgtagagatgatgtatcagcatttctcatctccgctgagcgc 154
Query: 517 tgagtcaaaaatgattttacctcgagta-aatcatc-cagaatattattcctatattctt 574
| ||||||||||||||||||| |||| ||||||| ||| |||||||| || || || |
Sbjct: 153 aggatcaaaaatgattttacctcaagtanaatcatcncaggatattatttctgtactcct 94
Query: 575 tctccagcaac 585
|||||||||||
Sbjct: 93 tctccagcaac 83
>gb|AL819246.1|AL819246 AL819246 n:129 Triticum aestivum cDNA clone E09_n129_plate_17, mRNA
sequence
Length = 408
Score = 353 bits (178), Expect = 9e-096
Identities = 346/402 (86%)
Strand = Plus / Minus
Query: 87 taaagtattgatctctccaattatatacactggtcttccatcaaaaacagacgacagtgt 146
|||| |||| |||||||| ||||||| ||||||||| | ||| || | ||| || || ||
Sbjct: 408 taaattattaatctctccgattatatgcactggtctgctatcgaacatagatgaaagcgt 349
Query: 147 cgactcacacagcttctttagttcccttgtttttgtaattgctgcctcttgctttggcca 206
| |||| | |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 348 tgcctcagagagcttctttagttcccttgtttttgtaattgctgcctcttgcttcggcca 289
Query: 207 tgatgatgacagtgcgttttgcagctccatacgcttaacagataaatcacctaaaccttc 266
|||||||| ||||| ||||||||||||||||||||||| || ||||||||||| |||||
Sbjct: 288 ggatgatgatagtgcattttgcagctccatacgcttaactgacaaatcacctaagccttc 229
Query: 267 ccgtagttttacttcgtgatgcttcttctcttctaagcttgaaactaatctatccagaaa 326
|| ||||| || || ||||| ||||| || |||||| |||| || ||||| |||| |||
Sbjct: 228 tcgcagtttcacctcatgatgtttcttttcctctaaggttgacaccaatctgtccaaaaa 169
Query: 327 ccttttagagttaaggatcattataaggtcaagagtcttctgattagttagcaatgagat 386
||||||| |||| ||||||||||||||||||||||| ||||| || || |||| |||||
Sbjct: 168 ccttttaaagttgaggatcattataaggtcaagagttttctggttggtgagcagagagat 109
Query: 387 tgctgacgagatctctacaagcatgttctccaaactgtcaggagcatgctgctggagaac 446
|||||| || | ||||||||||| |||||||||| |||||||||| ||| ||||||||
Sbjct: 108 tgctgaggaaacttctacaagcatattctccaaacgttcaggagcatactgttggagaac 49
Query: 447 aaaaggtgagacagcttgcacttgatgctgtagagatgatgt 488
||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 48 gaaaggtgagactgcttgcacctgatgctgtagagatgatgt 7
>gb|BJ215444.1|BJ215444 BJ215444 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh7b11 3', mRNA sequence
Length = 597
Score = 343 bits (173), Expect = 9e-093
Identities = 325/376 (86%)
Strand = Plus / Plus
Query: 58 ccagctaattgactaacacttgagctcagtaaagtattgatctctccaattatatacact 117
|||||||| |||||||||||||| ||||||||| |||| |||||||||||||||| ||||
Sbjct: 218 ccagctaactgactaacacttgaactcagtaaattattaatctctccaattatatgcact 277
Query: 118 ggtcttccatcaaaaacagacgacagtgtcgactcacacagcttctttagttcccttgtt 177
||||| | ||| || | ||| || || || | |||||| |||||||||||||||||||||
Sbjct: 278 ggtctgctatcgaacatagatgaaagcgttgcctcacagagcttctttagttcccttgtt 337
Query: 178 tttgtaattgctgcctcttgctttggccatgatgatgacagtgcgttttgcagctccata 237
|||| |||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||
Sbjct: 338 tttgcaattgctgcctcttgcttcggccaggatgatgatagtgcattttgcagctccata 397
Query: 238 cgcttaacagataaatcacctaaaccttcccgtagttttacttcgtgatgcttcttctct 297
|||||||| |||||||||||||| ||||| || ||||| || || ||||| ||||| ||
Sbjct: 398 cgcttaactgataaatcacctaagccttctcgcagtttcacctcatgatgtttcttttcc 457
Query: 298 tctaagcttgaaactaatctatccagaaaccttttagagttaaggatcattataaggtca 357
|||||| |||| || ||||| |||| ||||||||||||||| ||||||||||||||||||
Sbjct: 458 tctaaggttgacaccaatctctccaaaaaccttttagagttgaggatcattataaggtca 517
Query: 358 agagtcttctgattagttagcaatgagattgctgacgagatctctacaagcatgttctcc 417
||||| ||||| || || |||| ||||||||||| || | ||||||||||| ||||||
Sbjct: 518 agagttttctggttggtgagcagagagattgctgaggaaacttctacaagcatattctcc 577
Query: 418 aaactgtcaggagcat 433
|||| ||| ||||||
Sbjct: 578 aaacgttcangagcat 593
>gb|BJ246162.1|BJ246162 BJ246162 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf21l24 5', mRNA sequence
Length = 628
Score = 254 bits (128), Expect = 6e-066
Identities = 248/288 (86%)
Strand = Plus / Minus
Query: 298 tctaagcttgaaactaatctatccagaaaccttttagagttaaggatcattataaggtca 357
|||||| |||| |||||||| |||| ||||||||||||||| ||||||||||||||||||
Sbjct: 628 tctaaggttgacactaatctgtccaaaaaccttttagagttgaggatcattataaggtca 569
Query: 358 agagtcttctgattagttagcaatgagattgctgacgagatctctacaagcatgttctcc 417
||||| ||||| || || |||| ||||||||||| || | || |||||||| ||||||
Sbjct: 568 agagttttctggttggtgagcagagagattgctgaggaaacttccacaagcatattctcc 509
Query: 418 aaactgtcaggagcatgctgctggagaacaaaaggtgagacagcttgcacttgatgctgt 477
|||| ||||||| || ||| |||||||| ||||||||||| |||||||| |||||||||
Sbjct: 508 aaacgttcaggagtatactgttggagaacgaaaggtgagactgcttgcacctgatgctgt 449
Query: 478 agagatgatgtgtctgcattcctcatctcccctaagcgttgagtcaaaaatgattttacc 537
||||||||||| || ||||| ||||||||| || |||| | |||||||||||||||||
Sbjct: 448 agagatgatgtatcagcatttctcatctccgctgagcgcaggatcaaaaatgattttacc 389
Query: 538 tcgagtaaatcatccagaatattattcctatattctttctccagcaac 585
|| |||||||||||||| |||||||| || || || ||||||||||||
Sbjct: 388 tcaagtaaatcatccaggatattatttctgtactccttctccagcaac 341
>gb|CV775826.1|CV775826 FGAS070230 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 840
Score = 230 bits (116), Expect = 9e-059
Identities = 224/260 (86%)
Strand = Plus / Minus
Query: 326 accttttagagttaaggatcattataaggtcaagagtcttctgattagttagcaatgaga 385
||||||||||||| ||||||||||||||||||||||| ||||| || || |||| ||||
Sbjct: 569 accttttagagttgaggatcattataaggtcaagagttttctggttggtgagcagagaga 510
Query: 386 ttgctgacgagatctctacaagcatgttctccaaactgtcaggagcatgctgctggagaa 445
||||||| || | || |||||||| |||||||||| ||||||| || ||| |||||||
Sbjct: 509 ttgctgaggaaacttccacaagcatattctccaaacgttcaggagtatactgttggagaa 450
Query: 446 caaaaggtgagacagcttgcacttgatgctgtagagatgatgtgtctgcattcctcatct 505
| ||||||||||| |||||||| |||||||||||||||||||| || ||||| |||||||
Sbjct: 449 cgaaaggtgagactgcttgcacctgatgctgtagagatgatgtatcagcatttctcatct 390
Query: 506 cccctaagcgttgagtcaaaaatgattttacctcgagtaaatcatccagaatattattcc 565
|| || |||| | ||||||||||||||||||| |||||||||||||| |||||||| |
Sbjct: 389 ccgctgagcgcaggatcaaaaatgattttacctcaagtaaatcatccaggatattatttc 330
Query: 566 tatattctttctccagcaac 585
| || || ||||||||||||
Sbjct: 329 tgtactccttctccagcaac 310
>gb|CA627779.1|CA627779 wdr1.pk0005.g12 wdr1 Triticum aestivum cDNA clone wdr1.pk0005.g12
5' end, mRNA sequence
Length = 463
Score = 210 bits (106), Expect = 9e-053
Identities = 188/218 (86%)
Strand = Plus / Plus
Query: 58 ccagctaattgactaacacttgagctcagtaaagtattgatctctccaattatatacact 117
|||||||| |||||||||||||| ||| ||||| |||| ||||| |||||||||| ||||
Sbjct: 107 ccagctaactgactaacacttgaactcggtaaattattaatctcnccaattatatgcact 166
Query: 118 ggtcttccatcaaaaacagacgacagtgtcgactcacacagcttctttagttcccttgtt 177
||||| | |||||| | ||| || || || | |||| | ||||||||||||||||||| |
Sbjct: 167 ggtctgctatcaaacatagatgaaagcgttgcctcagagagcttctttagttcccttgnt 226
Query: 178 tttgtaattgctgcctcttgctttggccatgatgatgacagtgcgttttgcagctccata 237
||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||
Sbjct: 227 tttgtaattgctgcctcttgcttcggccangatgatgatagtgcattttgcagctccata 286
Query: 238 cgcttaacagataaatcacctaaaccttcccgtagttt 275
||| |||| | ||||||||| || ||||| || |||||
Sbjct: 287 cgcntaactgntaaatcaccnaanccttctcgnagttt 324
>gb|CA695514.1|CA695514 wlmk8.pk0010.g6 wlmk8 Triticum aestivum cDNA clone wlmk8.pk0010.g6
5' end, mRNA sequence
Length = 652
Score = 208 bits (105), Expect = 3e-052
Identities = 199/229 (86%), Gaps = 1/229 (0%)
Strand = Plus / Minus
Query: 324 aaaccttttagagttaaggatcattataaggtcaagagtcttct-gattagttagcaatg 382
||||||||||||||| ||||||||||||||||||||||| |||| | || || |||| |
Sbjct: 250 aaaccttttagagttgaggatcattataaggtcaagagttttcttggttggtgagcagag 191
Query: 383 agattgctgacgagatctctacaagcatgttctccaaactgtcaggagcatgctgctgga 442
|||||||||| || | ||||||||||| |||||||||| |||||||||| ||| ||||
Sbjct: 190 agattgctgaggaaacttctacaagcatattctccaaacgttcaggagcatactgttgga 131
Query: 443 gaacaaaaggtgagacagcttgcacttgatgctgtagagatgatgtgtctgcattcctca 502
|||| ||||||||||| |||||||| |||||||||||||||||||| || ||||| ||||
Sbjct: 130 gaacgaaaggtgagactgcttgcacctgatgctgtagagatgatgtatcagcatttctca 71
Query: 503 tctcccctaagcgttgagtcaaaaatgattttacctcgagtaaatcatc 551
||||| || |||| | ||||||||||||||||||| |||||||||||
Sbjct: 70 tctccgctgagcgcaggatcaaaaatgattttacctcaagtaaatcatc 22
Score = 71.9 bits (36), Expect = 5e-011
Identities = 70/79 (88%), Gaps = 2/79 (2%)
Strand = Plus / Minus
Query: 160 ttctttagttcccttgtttttgtaattgctgcctcttgctttgg-ccatgatgatgacag 218
|||||||||||||||||||||| ||||| | ||||||||| || ||| |||||||| ||
Sbjct: 411 ttctttagttcccttgtttttgcaattg-ttnctcttgcttcggcccaggatgatgatag 353
Query: 219 tgcgttttgcagctccata 237
||| |||||||||||||||
Sbjct: 352 tgcattttgcagctccata 334
>gb|BE400536.1|BE400536 AWB004.F10F000328 ITEC AWB Wheat Meiotic Stage Library Triticum
aestivum cDNA clone AWB004.F10, mRNA sequence
Length = 375
Score = 141 bits (71), Expect = 7e-032
Identities = 125/143 (87%)
Strand = Plus / Plus
Query: 58 ccagctaattgactaacacttgagctcagtaaagtattgatctctccaattatatacact 117
|||||||| |||||||||||||| ||||||||| |||| |||||||| ||||||| ||||
Sbjct: 87 ccagctaactgactaacacttgaactcagtaaattattaatctctccgattatatgcact 146
Query: 118 ggtcttccatcaaaaacagacgacagtgtcgactcacacagcttctttagttcccttgtt 177
||||| | ||| || | ||| || || || | |||| | |||||||||||||||||||||
Sbjct: 147 ggtctgctatcgaacatagatgaaagcgttgcctcagagagcttctttagttcccttgtt 206
Query: 178 tttgtaattgctgcctcttgctt 200
|||||||||||||||||||||||
Sbjct: 207 tttgtaattgctgcctcttgctt 229
>gb|CA642381.1|CA642381 wre1n.pk0054.b11 wre1n Triticum aestivum cDNA clone
wre1n.pk0054.b11 5' end, mRNA sequence
Length = 549
Score = 115 bits (58), Expect = 4e-024
Identities = 121/141 (85%), Gaps = 1/141 (0%)
Strand = Plus / Minus
Query: 441 gagaacaaaaggtgagacagcttgcacttgatgctgtagagatgatgtgtctgcattcct 500
|||||| |||||||||| |||||||| |||||||||||||||||||| || ||||| ||
Sbjct: 427 gagaacgaaaggtgagat-gcttgcacctgatgctgtagagatgatgtatcagcatttct 369
Query: 501 catctcccctaagcgttgagtcaaaaatgattttacctcgagtaaatcatccagaatatt 560
||||||| || |||| | |||||||||||||||| || |||||||||||||| |||||
Sbjct: 368 catctccgctgagcgcaggatcaaaaatgattttacntcaagtaaatcatccaggatatt 309
Query: 561 attcctatattctttctccag 581
||| || || || ||||||||
Sbjct: 308 atttctgtactccttctccag 288
>gb|CA681396.1|CA681396 wlm24.pk0020.f7 wlm24 Triticum aestivum cDNA clone wlm24.pk0020.f7
5' end, mRNA sequence
Length = 218
Score = 81.8 bits (41), Expect = 5e-014
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 58 ccagctaattgactaacacttgagctcagtaaagtattgatctctccaattatatacact 117
|||||||| |||||||||||||| ||||||||| |||| |||||||| ||||||| ||||
Sbjct: 102 ccagctaactgactaacacttgaactcagtaaattattaatctctccgattatatgcact 43
Query: 118 ggtct 122
|||||
Sbjct: 42 ggtct 38
>gb|CK162605.1|CK162605 FGAS015203 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1052
Score = 42.1 bits (21), Expect = 0.045
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 58 ccagctaattgactaacacttgagctcag 86
|||||||| |||||||||||||| |||||
Sbjct: 46 ccagctaactgactaacacttgaactcag 18
>gb|BG908401.1|BG908401 TaLr1167G04R TaLr1 Triticum aestivum cDNA clone TaLr1167G04 5',
mRNA sequence
Length = 536
Score = 40.1 bits (20), Expect = 0.18
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 74 cacttgagctcagtaaagtattga 97
|||||||||||||||| |||||||
Sbjct: 66 cacttgagctcagtaacgtattga 43
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 112,295
Number of Sequences: 636343
Number of extensions: 112295
Number of successful extensions: 29347
Number of sequences better than 0.5: 18
Number of HSP's better than 0.5 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29316
Number of HSP's gapped (non-prelim): 24
length of query: 627
length of database: 367,240,239
effective HSP length: 19
effective length of query: 608
effective length of database: 355,149,722
effective search space: 215931030976
effective search space used: 215931030976
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)