BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2485944.3.1
(991 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV772707.1|CV772707 FGAS067102 Triticum aestivum FGAS: L... 283 1e-074
gb|BJ267744.1|BJ267744 BJ267744 Y. Ogihara unpublished cDNA... 194 8e-048
gb|CV777769.1|CV777769 FGAS072176 Triticum aestivum FGAS: L... 194 8e-048
gb|BE405359.1|BE405359 WHE1213_D12_G23ZS Wheat etiolated se... 180 1e-043
gb|BE446171.1|BE446171 WHE1142_E04_I08ZS Wheat etiolated se... 176 2e-042
gb|BJ245426.1|BJ245426 BJ245426 Y. Ogihara unpublished cDNA... 176 2e-042
gb|BE443397.1|BE443397 WHE1104_F06_L12ZS Wheat etiolated se... 168 5e-040
gb|CA640772.1|CA640772 wre1n.pk0020.f6 wre1n Triticum aesti... 168 5e-040
gb|BJ272693.1|BJ272693 BJ272693 Y. Ogihara unpublished cDNA... 165 7e-039
gb|CA693055.1|CA693055 wlm96.pk056.k10 wlm96 Triticum aesti... 161 1e-037
gb|CV764495.1|CV764495 FGAS058880 Triticum aestivum FGAS: L... 143 3e-032
gb|BE442759.1|BE442759 WHE1105_G02_M03ZS Wheat etiolated se... 129 4e-028
gb|BJ302862.1|BJ302862 BJ302862 Y. Ogihara unpublished cDNA... 121 1e-025
gb|AJ603861.1|AJ603861 AJ603861 T07 Triticum aestivum cDNA ... 121 1e-025
gb|DN829485.1|DN829485 KUCD01_06_C02_T3 WSWR cDNA library T... 121 1e-025
gb|CV776377.1|CV776377 FGAS070781 Triticum aestivum FGAS: L... 113 2e-023
gb|AL823313.1|AL823313 AL823313 p:133 Triticum aestivum cDN... 105 6e-021
gb|CD906673.1|CD906673 G468.105E22F011012 G468 Triticum aes... 100 4e-019
gb|BJ251310.1|BJ251310 BJ251310 Y. Ogihara unpublished cDNA... 88 1e-015
gb|CD906672.1|CD906672 G468.105E22F010810 G468 Triticum aes... 78 1e-012
gb|CD452973.1|CD452973 WHE1142_E04_I08ZT CS wheat etiolated... 74 2e-011
gb|CV774106.1|CV774106 FGAS068503 Triticum aestivum FGAS: L... 74 2e-011
gb|BE445999.1|BE445999 WHE1148_D10_H20ZS Wheat etiolated se... 70 3e-010
gb|BJ303076.1|BJ303076 BJ303076 Y. Ogihara unpublished cDNA... 50 3e-004
gb|BJ308717.1|BJ308717 BJ308717 Y. Ogihara unpublished cDNA... 48 0.001
>gb|CV772707.1|CV772707 FGAS067102 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 835
Score = 283 bits (143), Expect = 1e-074
Identities = 359/431 (83%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||| || ||||||||||| || ||||||||||||||| |||||||| ||||||||||
Sbjct: 157 cctttagtccctgggcatgaaattgctggagttgtaactgaggttggttcagatgtcaag 216
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactcttgccgtgattgt 662
||||| ||| |||| |||||||| | ||| || |||||||| ||||| |||||||| |||
Sbjct: 217 ggcttcaaactgggcgaccatgtggctgtcgggacatatgtcaactcatgccgtgactgt 276
Query: 663 gagaactgcaatatctctctagacaaccattgcccaaaagcagtttatactttcaatggc 722
|| |||||||||| || || || ||||| ||| |||| |||| |||||||||||
Sbjct: 277 gacaactgcaatagcttcctcgagaaccactgctcaaagtttgttttcactttcaatggt 336
Query: 723 attgatacagatggaactgtcacaaaggggggttactccactcacattgtagtccatgaa 782
| ||||| || || ||||||||||||| || || ||||||||||||||||| ||||||
Sbjct: 337 gtcgatacggacggtgctgtcacaaagggaggatattccactcacattgtagttcatgaa 396
Query: 783 aggtattgcttcaaaatacccgatggctaccctttggcgaaggcagcacctcttctgtgt 842
|||| |||| |||||||| |||||||| || |||| |||||||||||| | | |||
Sbjct: 397 cggtactgctataaaatacctgatggctatccattggaaaaggcagcacctttggtttgt 456
Query: 843 gctggaataaccgtgtatactccaatgatgcgacacaacatgaaccaacctggaaagtca 902
||||| || || ||||||||||| |||| |||||| ||||||||||| || |||||||||
Sbjct: 457 gctgggatcactgtgtatactccgatgacgcgacataacatgaaccagccgggaaagtca 516
Query: 903 cttggggtcattggtcttggtggtctgggtcacatggctgtgaaatttggtaaagcattt 962
|| || ||||||||||||||||| ||||||||||||| ||||||||||| ||||| |||
Sbjct: 517 ctgggtgtcattggtcttggtgggttgggtcacatggcagtgaaatttgggaaagccttt 576
Query: 963 ggtcttaaggt 973
|| || |||||
Sbjct: 577 ggcctgaaggt 587
>gb|BJ267744.1|BJ267744 BJ267744 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh13b23 5', mRNA sequence
Length = 703
Score = 194 bits (98), Expect = 8e-048
Identities = 242/290 (83%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||| || ||||||||||| || ||||||||||||||| |||||||| ||||||||||
Sbjct: 398 cctttagtccctgggcatgaaattgctggagttgtaactgaggttggttcagatgtcaag 457
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactcttgccgtgattgt 662
||||| ||| |||| |||||||| | |||||| |||||||| ||||| ||||| || |||
Sbjct: 458 ggcttcaaactgggcgaccatgtggctgttgggacatatgtcaactcatgccgcgactgt 517
Query: 663 gagaactgcaatatctctctagacaaccattgcccaaaagcagtttatactttcaatggc 722
|| |||||||||| || || || ||||| ||| ||||| |||| |||||||||||
Sbjct: 518 gacaactgcaatagcttcctcgagaaccactgctcaaaatttgttttcactttcaatggt 577
Query: 723 attgatacagatggaactgtcacaaaggggggttactccactcacattgtagtccatgaa 782
||||||| || || |||||||||||||| || || |||| |||||||||||| ||||||
Sbjct: 578 gttgatacggacggtactgtcacaaagggaggatattccagtcacattgtagttcatgaa 637
Query: 783 aggtattgcttcaaaatacccgatggctaccctttggcgaaggcagcacc 832
||||| |||| |||||||| ||||| ||||| ||| ||||||||||||
Sbjct: 638 aggtactgctataaaatacctgatggttacccactggagaaggcagcacc 687
Score = 58.0 bits (29), Expect = 1e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 375 ggcaactgcaaagcttgggcagcgagagatccttctggagttctctcaccacacagtttt 434
|||||||||| || ||||| || | ||||||||||||||| ||||| |||||||||||
Sbjct: 230 ggcaactgcagtgcctgggcggcaaaagatccttctggagtactctccccacacagtttc 289
Query: 435 aaccg 439
|||||
Sbjct: 290 aaccg 294
>gb|CV777769.1|CV777769 FGAS072176 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 824
Score = 194 bits (98), Expect = 8e-048
Identities = 297/362 (82%), Gaps = 1/362 (0%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||| || ||||||||||| || ||||||||||||||| |||||||| ||||||||||
Sbjct: 457 cctttagtccctgggcatgaaattgctggagttgtaactgaggttggttcagatgtcaag 516
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactcttgccgtgattgt 662
||||| ||| |||| |||||||| | ||| || |||||||| ||||| |||||||| |||
Sbjct: 517 ggcttcaaactgggcgaccatgtggctgtcgggacatatgtcaactcatgccgtgactgt 576
Query: 663 gagaactgcaatatctctctagacaaccattgcccaaaagcagtttatactttcaatggc 722
|| |||||||||| || || || ||| | ||| |||| |||| |||||||||||
Sbjct: 577 gacaactgcaatagcttcctcgagaac-actgctcaaagtttgttttcactttcaatggt 635
Query: 723 attgatacagatggaactgtcacaaaggggggttactccactcacattgtagtccatgaa 782
| ||||| || || ||||||||||||| || || ||||||||||||||||| ||||||
Sbjct: 636 gtcgatacggacggtgctgtcacaaagggaggatattccactcacattgtagttcatgaa 695
Query: 783 aggtattgcttcaaaatacccgatggctaccctttggcgaaggcagcacctcttctgtgt 842
|||| |||| |||||||| |||||||| || |||| |||||||||||| | | |||
Sbjct: 696 cggtactgctataaaatacctgatggctatccattgggaaaggcagcacctttggtttgt 755
Query: 843 gctggaataaccgtgtatactccaatgatgcgacacaacatgaaccaacctggaaagtca 902
||||| || || ||||||||||| |||| |||||| ||||||||||| || || ||||||
Sbjct: 756 gctgggatcactgtgtatactccgatgacgcgacataacatgaaccagccggggaagtca 815
Query: 903 ct 904
||
Sbjct: 816 ct 817
Score = 50.1 bits (25), Expect = 3e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 375 ggcaactgcaaagcttgggcagcgagagatccttctggagttctctcaccacacagtttt 434
|||||||||| || ||||| || | ||||||||||||| | ||||| |||||||||||
Sbjct: 289 ggcaactgcagtgcctgggcggcaaaagatccttctggaatactctccccacacagtttc 348
Query: 435 aaccg 439
|||||
Sbjct: 349 aaccg 353
>gb|BE405359.1|BE405359 WHE1213_D12_G23ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1213_D12_G23, mRNA
sequence
Length = 538
Score = 180 bits (91), Expect = 1e-043
Identities = 301/371 (81%)
Strand = Plus / Plus
Query: 618 gaccatgtaggtgttggaacatatgtgaactcttgccgtgattgtgagaactgcaatatc 677
|||||||| | |||||| ||||| | ||||| |||||||| ||||| |||||||||| |
Sbjct: 20 gaccatgtggctgttgggacatacattaactcatgccgtgactgtgacaactgcaataac 79
Query: 678 tctctagacaaccattgcccaaaagcagtttatactttcaatggcattgatacagatgga 737
|| || ||||| ||| |||| |||| |||||||| || ||||||| || ||
Sbjct: 80 ctcctcgagaaccactgctcaaactttgttttcactttcaacggtgttgatacggacggt 139
Query: 738 actgtcacaaaggggggttactccactcacattgtagtccatgaaaggtattgcttcaaa 797
|||||||||||||| || || ||||||||||||||||| |||||| |||| |||| |||
Sbjct: 140 actgtcacaaagggaggatattccactcacattgtagttcatgaacggtactgctataaa 199
Query: 798 atacccgatggctaccctttggcgaaggcagcacctcttctgtgtgctggaataaccgtg 857
||||| ||||||||||| ||| ||||| |||||| | |||||||| || || |||
Sbjct: 200 atacctgatggctacccactggacaaggccgcacctttagcttgtgctgggatcactgtg 259
Query: 858 tatactccaatgatgcgacacaacatgaaccaacctggaaagtcacttggggtcattggt 917
||||| || ||||| || || ||||||||||| || || |||||||||||||| ||||||
Sbjct: 260 tatacaccgatgatccggcataacatgaaccagccggggaagtcacttggggttattggt 319
Query: 918 cttggtggtctgggtcacatggctgtgaaatttggtaaagcatttggtcttaaggtcaca 977
|||||||| ||||||||||||| ||||||||||| ||||| ||||| || || || |||
Sbjct: 320 cttggtgggttgggtcacatggcagtgaaatttgggaaagcctttggactgaatgtgaca 379
Query: 978 gttttcagtac 988
||||| |||||
Sbjct: 380 gttttgagtac 390
>gb|BE446171.1|BE446171 WHE1142_E04_I08ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1142_E04_I08,
mRNA sequence
Length = 545
Score = 176 bits (89), Expect = 2e-042
Identities = 221/265 (83%)
Strand = Plus / Plus
Query: 724 ttgatacagatggaactgtcacaaaggggggttactccactcacattgtagtccatgaaa 783
||||||| || || |||||||||||||| || || ||||||||||||||||| ||||||
Sbjct: 138 ttgatacggacggtactgtcacaaagggaggatattccactcacattgtagttcatgaac 197
Query: 784 ggtattgcttcaaaatacccgatggctaccctttggcgaaggcagcacctcttctgtgtg 843
|||| |||| |||||||| ||||||||||| ||| ||||| |||||| | ||||
Sbjct: 198 ggtactgctataaaatacctgatggctacccactggacaaggccgcacctttagcttgtg 257
Query: 844 ctggaataaccgtgtatactccaatgatgcgacacaacatgaaccaacctggaaagtcac 903
|||| || || |||||||| || ||||| || || ||||||||||| || || |||||||
Sbjct: 258 ctgggatcactgtgtatacaccgatgatccggcataacatgaaccagccggggaagtcac 317
Query: 904 ttggggtcattggtcttggtggtctgggtcacatggctgtgaaatttggtaaagcatttg 963
||||||| |||||||||||||| ||||||||||||| ||||||||||| ||||| ||||
Sbjct: 318 ttggggttattggtcttggtgggttgggtcacatggcagtgaaatttgggaaagcctttg 377
Query: 964 gtcttaaggtcacagttttcagtac 988
| || || || |||||||| |||||
Sbjct: 378 gactgaatgtgacagttttgagtac 402
>gb|BJ245426.1|BJ245426 BJ245426 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19i19 5', mRNA sequence
Length = 610
Score = 176 bits (89), Expect = 2e-042
Identities = 228/273 (83%), Gaps = 1/273 (0%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||| || ||||||||||| || ||||||||||||||| |||||||| ||||||||||
Sbjct: 333 cctttagtccctgggcatgaaattgctggagttgtaactgaggttggttcagatgtcaag 392
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactcttgccgtgattgt 662
||||| ||| |||| |||||||| | |||||| |||||||| ||||| ||||| || |||
Sbjct: 393 ggcttcaaactgggcgaccatgtggctgttgggacatatgtcaactcatgccgcgactgt 452
Query: 663 gagaactgcaatatctctctagacaaccattgcccaaaagcagtttatactttcaatggc 722
|| |||||||||| || || || ||||| ||| ||||| |||| |||||||||||
Sbjct: 453 gacaactgcaatagcttcctcgagaaccactgctcaaaatttgttttcactttcaatggt 512
Query: 723 attgatacagatggaactgtcacaaaggggggttactccactcacattgtagtccatgaa 782
||||||| || || |||||||||||||| || || |||| |||||||||||| ||||||
Sbjct: 513 gttgatacggacggtactgtcacaaagggaggatattccagtcacattgtagttcatgaa 572
Query: 783 aggtattgct-tcaaaatacccgatggctaccc 814
||||| |||| | |||||||| ||||| |||||
Sbjct: 573 aggtactgctataaaaatacctgatggttaccc 605
Score = 58.0 bits (29), Expect = 1e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 375 ggcaactgcaaagcttgggcagcgagagatccttctggagttctctcaccacacagtttt 434
|||||||||| || ||||| || | ||||||||||||||| ||||| |||||||||||
Sbjct: 165 ggcaactgcagtgcctgggcggcaaaagatccttctggagtactctccccacacagtttc 224
Query: 435 aaccg 439
|||||
Sbjct: 225 aaccg 229
>gb|BE443397.1|BE443397 WHE1104_F06_L12ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1104_F06_L12,
mRNA sequence
Length = 600
Score = 168 bits (85), Expect = 5e-040
Identities = 221/265 (83%), Gaps = 1/265 (0%)
Strand = Plus / Plus
Query: 724 ttgatacagatggaactgtcacaaaggggggttactccactcacattgtagtccatgaaa 783
||||||| || || |||||||||||||| || || ||||||||||||||||| ||||||
Sbjct: 148 ttgatacggacggtactgtcacaaagggaggatattccactcacattgtagttcatgaac 207
Query: 784 ggtattgcttcaaaatacccgatggctaccctttggcgaaggcagcacctcttctgtgtg 843
|||| |||| |||||||| ||||||||||| ||| ||||| |||||| | ||||
Sbjct: 208 ggtactgctataaaatacctgatggctacccactggacaaggccgcacctttagcttgtg 267
Query: 844 ctggaataaccgtgtatactccaatgatgcgacacaacatgaaccaacctggaaagtcac 903
|||| || || |||||||| || ||||| || || ||||||||||| || || |||||||
Sbjct: 268 ctgggatcactgtgtatacaccgatgatccggcataacatgaaccagccggggaagtcac 327
Query: 904 ttggggtcattggtcttggtggtctgggtcacatggctgtgaaatttggtaaagcatttg 963
||||||| |||||||||||||| ||||||||||||| ||||||||||| ||||| ||||
Sbjct: 328 ttggggt-attggtcttggtgggttgggtcacatggcagtgaaatttgggaaagcctttg 386
Query: 964 gtcttaaggtcacagttttcagtac 988
| || || || |||||||| |||||
Sbjct: 387 gactgaatgtgacagttttgagtac 411
>gb|CA640772.1|CA640772 wre1n.pk0020.f6 wre1n Triticum aestivum cDNA clone wre1n.pk0020.f6
5' end, mRNA sequence
Length = 247
Score = 168 bits (85), Expect = 5e-040
Identities = 202/241 (83%)
Strand = Plus / Plus
Query: 724 ttgatacagatggaactgtcacaaaggggggttactccactcacattgtagtccatgaaa 783
||||||| || || |||||||||||||| || || |||| ||||||||| || ||||||
Sbjct: 2 ttgatactgacggtactgtcacaaagggaggatattccagtcacattgttgttcatgaac 61
Query: 784 ggtattgcttcaaaatacccgatggctaccctttggcgaaggcagcacctcttctgtgtg 843
||||||||| |||||||| ||||||||||| ||| ||||| |||||| | | ||||
Sbjct: 62 ggtattgctataaaatacctgatggctacccactggaaaaggccgcacctttagtttgtg 121
Query: 844 ctggaataaccgtgtatactccaatgatgcgacacaacatgaaccaacctggaaagtcac 903
|||| || || ||||| | ||| ||||||||||| ||||||||||| || ||||||||||
Sbjct: 122 ctgggatcactgtgtacagtccgatgatgcgacataacatgaaccagccaggaaagtcac 181
Query: 904 ttggggtcattggtcttggtggtctgggtcacatggctgtgaaatttggtaaagcatttg 963
| || ||||||||||| ||||| ||||||||||||| ||||||||||| ||||| ||||
Sbjct: 182 tcggtgtcattggtctcggtgggttgggtcacatggcagtgaaatttgggaaagcctttg 241
Query: 964 g 964
|
Sbjct: 242 g 242
>gb|BJ272693.1|BJ272693 BJ272693 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh13b23 3', mRNA sequence
Length = 783
Score = 165 bits (83), Expect = 7e-039
Identities = 178/210 (84%)
Strand = Plus / Minus
Query: 764 tcacattgtagtccatgaaaggtattgcttcaaaatacccgatggctaccctttggcgaa 823
|||||||||||| ||||||||||| |||| |||||||| ||||| ||||| || |||
Sbjct: 779 tcacattgtagttcatgaaaggtactgctataaaatacctgatggttacccactgnagaa 720
Query: 824 ggcagcacctcttctgtgtgctggaataaccgtgtatactccaatgatgcgacacaacat 883
||||||||| | | ||||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 719 ggcagcaccgttagtttgtgctggaatcactgtgtacactccgatgatgcgacataacat 660
Query: 884 gaaccaacctggaaagtcacttggggtcattggtcttggtggtctgggtcacatggctgt 943
||| || || |||||||||||||| ||| ||||||||||||| ||||||||||||| ||
Sbjct: 659 gaaacagccgggaaagtcacttggtgtcgttggtcttggtgggttgggtcacatggcagt 600
Query: 944 gaaatttggtaaagcatttggtcttaaggt 973
||||||||| ||||| ||||| || |||||
Sbjct: 599 gaaatttgggaaagcctttggactgaaggt 570
>gb|CA693055.1|CA693055 wlm96.pk056.k10 wlm96 Triticum aestivum cDNA clone wlm96.pk056.k10
5' end, mRNA sequence
Length = 385
Score = 161 bits (81), Expect = 1e-037
Identities = 226/273 (82%), Gaps = 1/273 (0%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||| || |||||||||||||| |||||||||||||| |||||||| |||| |||||
Sbjct: 27 cctttagtccctgggcatgagattgctggagttgtaaccgaggttggttcagacgtcaag 86
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactcttgccgtgattgt 662
||||| ||| |||| |||||||| | |||||| |||||||| ||||| |||||||| |||
Sbjct: 87 ggcttcaaactgggcgaccatgtggctgttgggacatatgtcaactcatgccgtgactgt 146
Query: 663 gagaactgcaatatctctctagacaaccattgcccaaaagcagtttatactttcaatggc 722
|| |||||||||| || || || ||||| ||| |||| |||| |||||||||||
Sbjct: 147 gacaactgcaatagcttcctcgataaccactgctcaaagtttgttttcactttcaatggt 206
Query: 723 attgatacagatggaactgtcacaaaggggggttactcc-actcacattgtagtccatga 781
||||||| || || |||||||||||||| || || ||| | ||||||||| || |||||
Sbjct: 207 gttgatactgacggtactgtcacaaagggaggatattccaagtcacattgttgttcatga 266
Query: 782 aaggtattgcttcaaaatacccgatggctaccc 814
| ||||||||| |||||||| |||||||||||
Sbjct: 267 acggtattgctataaaatacctgatggctaccc 299
>gb|CV764495.1|CV764495 FGAS058880 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 828
Score = 143 bits (72), Expect = 3e-032
Identities = 295/368 (80%), Gaps = 1/368 (0%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||| || |||||||||||||| |||||||||||||| |||||||| | || |||||
Sbjct: 394 cctttagtccctgggcatgagattgctggagttgtaaccgaggttggttcggacgtcaag 453
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactcttgccgtgattgt 662
||||| ||| ||| |||||||| | |||||| ||||| | ||||| |||||||| |||
Sbjct: 454 ggcttcaaaccgggcgaccatgtggctgttgggacatacattaactcatgccgtgactgt 513
Query: 663 gagaactgcaatatctctctagacaaccattgcccaaaagcagtttatactttcaatggc 722
|| |||||||||| | || || ||||| ||| |||| |||| |||||||| ||
Sbjct: 514 gacaactgcaataacctcctcgagaaccactgctcaaactttgttttcactttcaacggt 573
Query: 723 attgatacagatggaactgtcacaaaggggggttactccactcacattgtagtccatgaa 782
||||||| || || |||||||||||||| || || ||||||||||||||||| ||||||
Sbjct: 574 gttgatacggacggtactgtcacaaagggaggatattccactcacattgtagttcatgaa 633
Query: 783 aggtattgcttcaaaatacccgatggctaccctttggcgaaggcagcacctcttctgtgt 842
|||| |||| |||||||| ||||||||||| ||| ||||| |||||| | |||
Sbjct: 634 cggtactgctataaaatacctgatggctacccactggacaaggccgcacctttagcttgt 693
Query: 843 gctggaataaccgtgtatactccaatgatgcgacacaacatgaaccaacc-tggaaagtc 901
||||| || || |||||||| || ||||| || || ||||||||||| || || |||||
Sbjct: 694 gctgggatcactgtgtatacaccgatgatccggcataacatgaaccagccgggggaagtc 753
Query: 902 acttgggg 909
||||||||
Sbjct: 754 acttgggg 761
Score = 69.9 bits (35), Expect = 3e-010
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 353 catggctgctgaatcagagaacggcaactgcaaagcttgggcagcgagagatccttctgg 412
||||||||||||||| |||| | ||||||||| || |||||||| | |||||||||||
Sbjct: 204 catggctgctgaatccgagagctgcaactgcagtgcctgggcagcaaatgatccttctgg 263
Query: 413 agttctctcaccacacagttttaaccg 439
||| ||||| || |||||||| |||||
Sbjct: 264 agtactctcccctcacagtttcaaccg 290
>gb|BE442759.1|BE442759 WHE1105_G02_M03ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1105_G02_M03,
mRNA sequence
Length = 465
Score = 129 bits (65), Expect = 4e-028
Identities = 116/133 (87%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||| || ||||||||||| || ||||||||||||||| |||||||| ||||||||||
Sbjct: 274 cctttagtccctgggcatgaaattgctggagttgtaactgaggttggttcagatgtcaag 333
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactcttgccgtgattgt 662
||||| ||| |||| |||||||| | |||||| |||||||| ||||| |||||||| |||
Sbjct: 334 ggcttcaaactgggcgaccatgtggctgttgggacatatgtcaactcatgccgtgactgt 393
Query: 663 gagaactgcaata 675
|| ||||||||||
Sbjct: 394 gacaactgcaata 406
Score = 77.8 bits (39), Expect = 1e-012
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 353 catggctgctgaatcagagaacggcaactgcaaagcttgggcagcgagagatccttctgg 412
||||||||||| ||| |||| |||||||||| |||||||| || | ||||||||||||
Sbjct: 84 catggctgctgcatccgagagtggcaactgcagtgcttgggcggcaaaagatccttctgg 143
Query: 413 agttctctcaccacacagttttaaccg 439
||| ||||| ||||||||||| |||||
Sbjct: 144 agtactctccccacacagtttcaaccg 170
>gb|BJ302862.1|BJ302862 BJ302862 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd17b18 5', mRNA sequence
Length = 550
Score = 121 bits (61), Expect = 1e-025
Identities = 115/133 (86%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||| || ||||||||||| || ||||||||||||||| |||||||| ||||||||||
Sbjct: 387 cctttagtccctgggcatgaaattgctggagttgtaactgaggttggttcagatgtcaag 446
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactcttgccgtgattgt 662
||||| ||| |||| |||||||| | |||||| |||||||| ||||| ||||| || |||
Sbjct: 447 ggcttcaaactgggcgaccatgtggctgttgggacatatgtcaactcatgccgcgactgt 506
Query: 663 gagaactgcaata 675
|| ||||||||||
Sbjct: 507 gacaactgcaata 519
Score = 58.0 bits (29), Expect = 1e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 375 ggcaactgcaaagcttgggcagcgagagatccttctggagttctctcaccacacagtttt 434
|||||||||| || ||||| || | ||||||||||||||| ||||| |||||||||||
Sbjct: 219 ggcaactgcagtgcctgggcggcaaaagatccttctggagtactctccccacacagtttc 278
Query: 435 aaccg 439
|||||
Sbjct: 279 aaccg 283
>gb|AJ603861.1|AJ603861 AJ603861 T07 Triticum aestivum cDNA clone B10_T07_plate_1, mRNA
sequence
Length = 518
Score = 121 bits (61), Expect = 1e-025
Identities = 115/133 (86%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||| || ||||||||||| || ||||||||||||||| |||||||| ||||||||||
Sbjct: 384 cctttagtccctgggcatgaaattgctggagttgtaactgaggttggttcagatgtcaag 443
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactcttgccgtgattgt 662
||||| ||| |||| |||||||| | ||| || |||||||| ||||| |||||||| |||
Sbjct: 444 ggcttcaaactgggcgaccatgtggctgtcgggacatatgtcaactcatgccgtgactgt 503
Query: 663 gagaactgcaata 675
|| ||||||||||
Sbjct: 504 gacaactgcaata 516
Score = 50.1 bits (25), Expect = 3e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 375 ggcaactgcaaagcttgggcagcgagagatccttctggagttctctcaccacacagtttt 434
|||||||||| || ||||| || | ||||||||||||| | ||||| |||||||||||
Sbjct: 216 ggcaactgcagtgcctgggcggcaaaagatccttctggaatactctccccacacagtttc 275
Query: 435 aaccg 439
|||||
Sbjct: 276 aaccg 280
>gb|DN829485.1|DN829485 KUCD01_06_C02_T3 WSWR cDNA library Triticum aestivum cDNA, mRNA
sequence
Length = 936
Score = 121 bits (61), Expect = 1e-025
Identities = 115/133 (86%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||| || ||||||||||| || ||||||||||||||| |||||||| ||||||||||
Sbjct: 441 cctttagtccctgggcatgaaattgctggagttgtaactgaggttggttcagatgtcaag 500
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactcttgccgtgattgt 662
||||| ||| |||| |||||||| | ||| || |||||||| ||||| |||||||| |||
Sbjct: 501 ggcttcaaactgggcgaccatgtggctgtcgggacatatgtcaactcatgccgtgactgt 560
Query: 663 gagaactgcaata 675
|| ||||||||||
Sbjct: 561 gacaactgcaata 573
Score = 50.1 bits (25), Expect = 3e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 375 ggcaactgcaaagcttgggcagcgagagatccttctggagttctctcaccacacagtttt 434
|||||||||| || ||||| || | ||||||||||||| | ||||| |||||||||||
Sbjct: 273 ggcaactgcagtgcctgggcggcaaaagatccttctggaatactctccccacacagtttc 332
Query: 435 aaccg 439
|||||
Sbjct: 333 aaccg 337
>gb|CV776377.1|CV776377 FGAS070781 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 876
Score = 113 bits (57), Expect = 2e-023
Identities = 210/261 (80%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||| || |||||||||||||| |||||||||||||| |||||||| | || |||||
Sbjct: 394 cctttagtccctgggcatgagattgctggagttgtaaccgaggttggttcggacgtcaag 453
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactcttgccgtgattgt 662
||||| ||| ||| |||||||| | |||||| ||||| | ||||| |||||||| |||
Sbjct: 454 ggcttcaaaccgggcgaccatgtggctgttgggacatacattaactcatgccgtgactgt 513
Query: 663 gagaactgcaatatctctctagacaaccattgcccaaaagcagtttatactttcaatggc 722
|| |||||||||| | || || ||||| ||| |||| |||| |||||||| ||
Sbjct: 514 gacaactgcaataacctcctcgagaaccactgctcaaactttgttttcactttcaacggt 573
Query: 723 attgatacagatggaactgtcacaaaggggggttactccactcacattgtagtccatgaa 782
||||||| || || |||||||||||||| || | ||||||||||||||||| ||||||
Sbjct: 574 gttgataccgacgggactgtcacaaagggaggaaattccactcacattgtagttcatgaa 633
Query: 783 aggtattgcttcaaaataccc 803
|||| |||| |||||||||
Sbjct: 634 cggtactgctataaaataccc 654
Score = 69.9 bits (35), Expect = 3e-010
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 353 catggctgctgaatcagagaacggcaactgcaaagcttgggcagcgagagatccttctgg 412
||||||||||||||| |||| | ||||||||| || |||||||| | |||||||||||
Sbjct: 204 catggctgctgaatccgagagctgcaactgcagtgcctgggcagcaaatgatccttctgg 263
Query: 413 agttctctcaccacacagttttaaccg 439
||| ||||| || |||||||| |||||
Sbjct: 264 agtactctcccctcacagtttcaaccg 290
>gb|AL823313.1|AL823313 AL823313 p:133 Triticum aestivum cDNA clone D09_p133_plate_2, mRNA
sequence
Length = 463
Score = 105 bits (53), Expect = 6e-021
Identities = 113/133 (84%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||| || |||||||||||||| |||||||||||||| |||||||| |||| ||| |
Sbjct: 326 cctttagtccctgggcatgagattgctggagttgtaaccgaggttggttcagacgtcgag 385
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactcttgccgtgattgt 662
||||| ||| |||| |||||||| | |||||| |||||||| |||| |||||||| |||
Sbjct: 386 ggcttcaaactgggcgaccatgtggctgttgggacatatgtcgactcatgccgtgactgt 445
Query: 663 gagaactgcaata 675
|| ||||||||||
Sbjct: 446 gacaactgcaata 458
Score = 50.1 bits (25), Expect = 3e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 403 atccttctggagttctctcaccacacagttttaaccg 439
||||||||||||| ||||| ||||||||||| |||||
Sbjct: 186 atccttctggagtactctccccacacagtttcaaccg 222
>gb|CD906673.1|CD906673 G468.105E22F011012 G468 Triticum aestivum cDNA clone G468105E22,
mRNA sequence
Length = 623
Score = 99.6 bits (50), Expect = 4e-019
Identities = 89/102 (87%)
Strand = Plus / Plus
Query: 872 gcgacacaacatgaaccaacctggaaagtcacttggggtcattggtcttggtggtctggg 931
|||||| ||||||||||| || ||||||||||| || ||||||||||| ||||| ||||
Sbjct: 12 gcgacataacatgaaccagccgggaaagtcactgggtgtcattggtctgggtgggttggg 71
Query: 932 tcacatggctgtgaaatttggtaaagcatttggtcttaaggt 973
||||||||| ||||||||||| ||||| ||||| || |||||
Sbjct: 72 tcacatggcagtgaaatttgggaaagcctttggcctgaaggt 113
>gb|BJ251310.1|BJ251310 BJ251310 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf19i19 3', mRNA sequence
Length = 626
Score = 87.7 bits (44), Expect = 1e-015
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 894 ggaaagtcacttggggtcattggtcttggtggtctgggtcacatggctgtgaaatttggt 953
|||||||||||||| ||| ||||||||||||| ||||||||||||| |||||||||||
Sbjct: 619 ggaaagtcacttggtgtcgttggtcttggtgggttgggtcacatggcagtgaaatttggg 560
Query: 954 aaagcatttggtcttaaggt 973
||||| ||||| || |||||
Sbjct: 559 aaagcctttggactgaaggt 540
>gb|CD906672.1|CD906672 G468.105E22F010810 G468 Triticum aestivum cDNA clone G468105E22,
mRNA sequence
Length = 575
Score = 77.8 bits (39), Expect = 1e-012
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 884 gaaccaacctggaaagtcacttggggtcattggtcttggtggtctgggtcacatggctgt 943
|||||| || ||||||||||| ||||||||||||| |||||| ||||||||||||| ||
Sbjct: 23 gaaccagccgggaaagtcactgggggtcattggtc-tggtgggttgggtcacatggcagt 81
Query: 944 gaaatttggtaaagc 958
||||||||| |||||
Sbjct: 82 gaaatttgggaaagc 96
>gb|CD452973.1|CD452973 WHE1142_E04_I08ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1142_E04_I08,
mRNA sequence
Length = 699
Score = 73.8 bits (37), Expect = 2e-011
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 912 attggtcttggtggtctgggtcacatggctgtgaaatttggtaaagcatttggtcttaag 971
|||||||||||||| ||||||||||||| ||||||||||| ||||| ||||| || ||
Sbjct: 697 attggtcttggtgggttgggtcacatggcagtgaaatttgggaaagcctttggactgaat 638
Query: 972 gtcacagttttcagtac 988
|| |||||||| |||||
Sbjct: 637 gtgacagttttgagtac 621
>gb|CV774106.1|CV774106 FGAS068503 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 834
Score = 73.8 bits (37), Expect = 2e-011
Identities = 106/129 (82%)
Strand = Plus / Plus
Query: 543 cctttggttcctgggcatgagatagctggagttgtaactcaggttggtgcagatgtcaaa 602
||||| || |||||||||||||| |||||||||||||| | |||||| | || |||||
Sbjct: 395 cctttagtccctgggcatgagattgctggagttgtaaccgaagttggttcggacgtcaag 454
Query: 603 ggctttaaagtgggtgaccatgtaggtgttggaacatatgtgaactcttgccgtgattgt 662
||||| ||| ||| |||||||| | |||||| ||||| | ||||| |||||||| |||
Sbjct: 455 ggcttcaaaccgggcgaccatgtggctgttgggacatacattaactcatgccgtgactgt 514
Query: 663 gagaactgc 671
|| ||||||
Sbjct: 515 gacaactgc 523
Score = 69.9 bits (35), Expect = 3e-010
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 353 catggctgctgaatcagagaacggcaactgcaaagcttgggcagcgagagatccttctgg 412
||||||||||||||| |||| | ||||||||| || |||||||| | |||||||||||
Sbjct: 205 catggctgctgaatccgagagctgcaactgcagtgcctgggcagcaaatgatccttctgg 264
Query: 413 agttctctcaccacacagttttaaccg 439
||| ||||| || |||||||| |||||
Sbjct: 265 agtactctcccctcacagtttcaaccg 291
>gb|BE445999.1|BE445999 WHE1148_D10_H20ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1148_D10_H20,
mRNA sequence
Length = 279
Score = 69.9 bits (35), Expect = 3e-010
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 353 catggctgctgaatcagagaacggcaactgcaaagcttgggcagcgagagatccttctgg 412
||||||||||||||| |||| | ||||||||| || |||||||| | |||||||||||
Sbjct: 85 catggctgctgaatccgagagctgcaactgcagtgcctgggcagcaaatgatccttctgg 144
Query: 413 agttctctcaccacacagttttaaccg 439
||| ||||| || |||||||| |||||
Sbjct: 145 agtactctcccctcacagtttcaaccg 171
>gb|BJ303076.1|BJ303076 BJ303076 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd18a08 5', mRNA sequence
Length = 240
Score = 50.1 bits (25), Expect = 3e-004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 401 agatccttctggagttctctcaccacacagttt 433
||||||||||||||| ||||| |||||||||||
Sbjct: 205 agatccttctggagtactctccccacacagttt 237
>gb|BJ308717.1|BJ308717 BJ308717 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd17b18 3', mRNA sequence
Length = 647
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 930 ggtcacatggctgtgaaatttggtaaagcatttggtcttaaggt 973
||||||||||| ||||||||||| ||||| ||||| || |||||
Sbjct: 647 ggtcacatggcagtgaaatttgggaaagcctttggactgaaggt 604
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 153,091
Number of Sequences: 636343
Number of extensions: 153091
Number of successful extensions: 40274
Number of sequences better than 0.5: 26
Number of HSP's better than 0.5 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40208
Number of HSP's gapped (non-prelim): 55
length of query: 991
length of database: 367,240,239
effective HSP length: 20
effective length of query: 971
effective length of database: 354,513,379
effective search space: 344232491009
effective search space used: 344232491009
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)