BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478343.2.1
(694 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA624642.1|CA624642 wl1n.pk0121.g11 wl1n Triticum aestiv... 615 e-174
gb|CD915387.1|CD915387 G550.125P10F010713 G550 Triticum aes... 196 1e-048
gb|BQ752889.1|BQ752889 WHE4120_D01_H02ZS Wheat salt-stresse... 180 8e-044
gb|CA721277.1|CA721277 wdk9n.pk001.e20 wdk9n Triticum aesti... 180 8e-044
gb|CD453688.1|CD453688 WHE0840_E04_J08ZT CS wheat vernalize... 180 8e-044
gb|BF474053.1|BF474053 WHE0840_E04_J08ZS Wheat vernalized c... 172 2e-041
gb|BE425760.1|BE425760 WHE0316_C11_C11ZS Wheat unstressed s... 170 8e-041
gb|BQ483975.1|BQ483975 WHE3515_A05_B09ZS Wheat unstressed r... 165 5e-039
gb|CV765720.1|CV765720 FGAS060107 Triticum aestivum FGAS: L... 159 3e-037
gb|CA700350.1|CA700350 wkm1c.pk005.e20 wkm1c Triticum aesti... 149 3e-034
gb|BJ281677.1|BJ281677 BJ281677 Y. Ogihara unpublished cDNA... 141 7e-032
gb|BQ578302.1|BQ578302 WHE0301_D03_G05ZS Wheat unstressed s... 141 7e-032
gb|CD373574.1|CD373574 WHE0425_A04_A07ZT CS wheat etiolated... 141 7e-032
gb|CD865781.1|CD865781 AZO2.101M06F001124 AZO2 Triticum aes... 139 3e-031
gb|BG313174.1|BG313174 WHE2054_F07_L14ZS Wheat salt-stresse... 133 2e-029
gb|CD867745.1|CD867745 AZO2.107B06R010328 AZO2 Triticum aes... 133 2e-029
gb|CK193504.1|CK193504 FGAS001918 Triticum aestivum FGAS: L... 133 2e-029
gb|CA615942.1|CA615942 wr1.pk166.f6 wr1 Triticum aestivum c... 129 3e-028
gb|CA615835.1|CA615835 wr1.pk169.d2 wr1 Triticum aestivum c... 127 1e-027
gb|BE405606.1|BE405606 WHE1209_C09_E17ZS Wheat etiolated se... 125 4e-027
gb|BE406114.1|BE406114 WHE0404_c07_c07zB Wheat etiolated se... 125 4e-027
gb|BQ743938.1|BQ743938 WHE4109_H10_O19ZS Wheat salt-stresse... 123 2e-026
gb|CA604693.1|CA604693 wr1.pk0043.b10 wr1 Triticum aestivum... 121 7e-026
gb|CA630327.1|CA630327 wle1n.pk0032.d11 wle1n Triticum aest... 117 1e-024
gb|CA720605.1|CA720605 wkm2n.pk007.f4 wkm2n Triticum aestiv... 103 2e-020
gb|CA719066.1|CA719066 wkm2n.pk003.n22 wkm2n Triticum aesti... 98 1e-018
gb|CA604032.1|CA604032 wr1.pk0033.e10 wr1 Triticum aestivum... 92 6e-017
gb|CA633057.1|CA633057 wle1n.pk0065.f6 wle1n Triticum aesti... 90 2e-016
gb|CA654049.1|CA654049 wre1n.pk162.d8 wre1n Triticum aestiv... 88 9e-016
gb|CD867744.1|CD867744 AZO2.107B06F001113 AZO2 Triticum aes... 78 9e-013
gb|CK163295.1|CK163295 FGAS015917 Triticum aestivum FGAS: L... 74 1e-011
gb|CA615191.1|CA615191 wr1.pk178.a6 wr1 Triticum aestivum c... 72 6e-011
gb|CK216261.1|CK216261 FGAS028248 Triticum aestivum FGAS: L... 66 3e-009
gb|CA625114.1|CA625114 wl1n.pk0123.c12 wl1n Triticum aestiv... 64 1e-008
gb|CA636643.1|CA636643 wle1n.pk0111.c6 wle1n Triticum aesti... 58 8e-007
gb|CD882790.1|CD882790 F1.111D15F010430 F1 Triticum aestivu... 58 8e-007
gb|CK195337.1|CK195337 FGAS003776 Triticum aestivum FGAS: L... 58 8e-007
gb|BJ231129.1|BJ231129 BJ231129 Y. Ogihara unpublished cDNA... 56 3e-006
gb|BU101240.1|BU101240 WHE3366_E07_J14ZS Chinese Spring alu... 54 1e-005
gb|BJ286771.1|BJ286771 BJ286771 Y. Ogihara unpublished cDNA... 52 5e-005
gb|CA498569.1|CA498569 WHE3245_A12_A23ZT Wheat meiotic anth... 52 5e-005
gb|CA648669.1|CA648669 wre1n.pk0124.b2 wre1n Triticum aesti... 52 5e-005
gb|CK196273.1|CK196273 FGAS004727 Triticum aestivum FGAS: L... 52 5e-005
gb|DN829308.1|DN829308 KUCD01_10_F05_T3 WSWR cDNA library T... 52 5e-005
gb|BE516604.1|BE516604 WHE0630_B10_C20ZA Wheat ABA-treated ... 50 2e-004
gb|BJ230352.1|BJ230352 BJ230352 Y. Ogihara unpublished cDNA... 50 2e-004
gb|BQ803441.1|BQ803441 WHE2837_F11_K21ZS Triticum monococcu... 50 2e-004
gb|CD881956.1|CD881956 F1.104N12F010330 F1 Triticum aestivu... 50 2e-004
gb|BE445412.1|BE445412 WHE1136_C06_F12ZS Wheat etiolated se... 48 8e-004
gb|BM134647.1|BM134647 WHE0451_E03_E03ZS Wheat Fusarium gra... 48 8e-004
gb|BQ838262.1|BQ838262 WHE2908_D04_H08ZS Wheat aluminum-str... 48 8e-004
gb|BU100256.1|BU100256 WHE3351_B05_C09ZS Chinese Spring alu... 48 8e-004
gb|CD452897.1|CD452897 WHE1136_C06_F12ZT CS wheat etiolated... 48 8e-004
gb|BG905373.1|BG905373 TaLr1139C08F TaLr1 Triticum aestivum... 46 0.003
gb|CV760335.1|CV760335 FGAS054719 Triticum aestivum FGAS: L... 46 0.003
gb|CN012928.1|CN012928 WHE3954_F06_L12ZS Wheat Fusarium gra... 44 0.013
gb|CA620385.1|CA620385 wl1n.pk0055.d12 wl1n Triticum aestiv... 42 0.050
gb|BE488971.1|BE488971 WHE1077_B03_D05ZS Wheat unstressed s... 40 0.20
gb|BG906285.1|BG906285 TaLr1148B05F TaLr1 Triticum aestivum... 40 0.20
gb|BG908180.1|BG908180 TaLr1166B10F TaLr1 Triticum aestivum... 40 0.20
gb|BJ279179.1|BJ279179 BJ279179 Y. Ogihara unpublished cDNA... 40 0.20
gb|BJ284242.1|BJ284242 BJ284242 Y. Ogihara unpublished cDNA... 40 0.20
gb|BQ169201.1|BQ169201 WHE2162_E06_J12ZT Triticum turgidum ... 40 0.20
gb|CA612266.1|CA612266 wr1.pk0139.e8 wr1 Triticum aestivum ... 40 0.20
gb|CD873775.1|CD873775 AZO3.100K08F010925 AZO3 Triticum aes... 40 0.20
>gb|CA624642.1|CA624642 wl1n.pk0121.g11 wl1n Triticum aestivum cDNA clone wl1n.pk0121.g11
5' end, mRNA sequence
Length = 609
Score = 615 bits (310), Expect = e-174
Identities = 388/407 (95%), Gaps = 7/407 (1%)
Strand = Plus / Plus
Query: 278 tggaacacaagttttgatttattccaactcatcatccggaacatggtacccaatacaagg 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 tggaacacaagttttgatttattccaactcatcatccggaacatggtacccaatacaagg 72
Query: 338 atcgatcagtaggagtttatgagatgaaccaaattagttaaatccgacccagcagattca 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 atcgatcagtaggagtttatgagatgaaccaaattagttaaatccgacccagcagattca 132
Query: 398 tcgatgcccttgtccgcagcgatcttgagctcgttcatcctcttcctgatgccctcccct 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tcgatgcccttgtccgcagcgatcttgagctcgttcatcctcttcctgatgccctcccct 192
Query: 458 tcctcgctgccgcccatgagcctgtcgatggcggccttgatctcccctctctccagctgg 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tcctcgctgccgcccatgagcctgtcgatggcggccttgatctcccctctctccagctgg 252
Query: 518 tccccggcgacctccgtgcccaccttccagacgtggcacacgtacctcgcgttgccg-ta 576
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 253 tccccggcgacctccgtgcccaccttccagacgtgg-ncacgtacctcgcgttgccgnta 311
Query: 577 ctggtccccgtggcg-cgggtggcagatcatgggcacgccctccgacacggcctccacgg 635
| ||||||||||||| ||||||| | || | ||| | | |||||||||||| ||||||||
Sbjct: 312 cnggtccccgtggcgccgggtggna-attaaggggaag-cctccgacacgg-ctccacgg 368
Query: 636 tggagttccagccgcagtgggtgaagaagccgcccacggccgggtgc 682
|||||||||| ||||| |||||||| || |||||| ||||||||||
Sbjct: 369 tggagttccanccgca-tgggtgaaaaanncgcccanggccgggtgc 414
>gb|CD915387.1|CD915387 G550.125P10F010713 G550 Triticum aestivum cDNA clone G550125P10,
mRNA sequence
Length = 463
Score = 196 bits (99), Expect = 1e-048
Identities = 185/213 (86%), Gaps = 3/213 (1%)
Strand = Plus / Minus
Query: 485 atggcggccttgatctcccctctctccagctggtcc---ccggcgacctccgtgcccacc 541
||||||||||||||| ||||||||||||| ||| | ||| |||||||| |||||||
Sbjct: 315 atggcggccttgatcctccctctctccagccggtgcgagccgtcgacctccacgcccacc 256
Query: 542 ttccagacgtggcacacgtacctcgcgttgccgtactggtccccgtggcgcgggtggcag 601
||||||||| | ||||||||| ||||||||||||||||| ||||| |||||||||||
Sbjct: 255 ctccagacgtcggccacgtacctggcgttgccgtactggtcgccgtgcagcgggtggcag 196
Query: 602 atcatgggcacgccctccgacacggcctccacggtggagttccagccgcagtgggtgaag 661
||||| ||||||||||||| | |||||||| |||||||||||||||| ||||||||||
Sbjct: 195 atcatcggcacgccctccgcgatcgcctccaccgtggagttccagccgctgtgggtgaag 136
Query: 662 aagccgcccacggccgggtgcgcgagcacctcc 694
||| ||||||| ||||||||||| |||||||||
Sbjct: 135 aaggcgcccaccgccgggtgcgccagcacctcc 103
>gb|BQ752889.1|BQ752889 WHE4120_D01_H02ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4120_D01_H02, mRNA sequence
Length = 754
Score = 180 bits (91), Expect = 8e-044
Identities = 183/213 (85%), Gaps = 3/213 (1%)
Strand = Plus / Minus
Query: 485 atggcggccttgatctcccctctctccagctggtcc---ccggcgacctccgtgcccacc 541
|||||||||||||| ||||||||||||| ||| | ||| |||||||| |||||||
Sbjct: 605 atggcggccttgatactccctctctccagccggtgcgtgccgtcgacctccacgcccacc 546
Query: 542 ttccagacgtggcacacgtacctcgcgttgccgtactggtccccgtggcgcgggtggcag 601
||||| |||| | ||||||||| ||||||||||||||||| ||||| |||||||||||
Sbjct: 545 ttccatacgtcggccacgtacctggcgttgccgtactggtcgccgtgcagcgggtggcag 486
Query: 602 atcatgggcacgccctccgacacggcctccacggtggagttccagccgcagtgggtgaag 661
||||| |||||||||||||| | |||||||| || ||||||||||||| ||| ||||||
Sbjct: 485 atcatcggcacgccctccgagatcgcctccaccgtcgagttccagccgctgtgcgtgaag 426
Query: 662 aagccgcccacggccgggtgcgcgagcacctcc 694
||| ||||||| ||||||||||| |||||||||
Sbjct: 425 aaggcgcccaccgccgggtgcgccagcacctcc 393
>gb|CA721277.1|CA721277 wdk9n.pk001.e20 wdk9n Triticum aestivum cDNA clone wdk9n.pk001.e20
5' end, mRNA sequence
Length = 516
Score = 180 bits (91), Expect = 8e-044
Identities = 183/213 (85%), Gaps = 3/213 (1%)
Strand = Plus / Plus
Query: 485 atggcggccttgatctcccctctctccagctggtcc---ccggcgacctccgtgcccacc 541
|||||||||||||| ||||||||||||| ||| | ||| |||||||| |||||||
Sbjct: 261 atggcggccttgatactccctctctccagccggtgcgtgccgtcgacctccacgcccacc 320
Query: 542 ttccagacgtggcacacgtacctcgcgttgccgtactggtccccgtggcgcgggtggcag 601
||||| |||| | ||||||||| ||||||||||||||||| ||||| |||||||||||
Sbjct: 321 ttccatacgtcggccacgtacctggcgttgccgtactggtcgccgtgcagcgggtggcag 380
Query: 602 atcatgggcacgccctccgacacggcctccacggtggagttccagccgcagtgggtgaag 661
||||| |||||||||||||| | |||||||| || ||||||||||||| ||| ||||||
Sbjct: 381 atcatcggcacgccctccgagatcgcctccaccgtcgagttccagccgctgtgcgtgaag 440
Query: 662 aagccgcccacggccgggtgcgcgagcacctcc 694
||| ||||||| ||||||||||| |||||||||
Sbjct: 441 aaggcgcccaccgccgggtgcgccagcacctcc 473
>gb|CD453688.1|CD453688 WHE0840_E04_J08ZT CS wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0840_E04_J08, mRNA sequence
Length = 537
Score = 180 bits (91), Expect = 8e-044
Identities = 183/213 (85%), Gaps = 3/213 (1%)
Strand = Plus / Plus
Query: 485 atggcggccttgatctcccctctctccagctggtcc---ccggcgacctccgtgcccacc 541
|||||||||||||| ||||||||||||| ||| | ||| |||||||| |||||||
Sbjct: 261 atggcggccttgatactccctctctccagccggtgcgtgccgtcgacctccacgcccacc 320
Query: 542 ttccagacgtggcacacgtacctcgcgttgccgtactggtccccgtggcgcgggtggcag 601
||||| |||| | ||||||||| ||||||||||||||||| ||||| |||||||||||
Sbjct: 321 ttccatacgtcggccacgtacctggcgttgccgtactggtcgccgtgcagcgggtggcag 380
Query: 602 atcatgggcacgccctccgacacggcctccacggtggagttccagccgcagtgggtgaag 661
||||| |||||||||||||| | |||||||| || ||||||||||||| ||| ||||||
Sbjct: 381 atcatcggcacgccctccgagatcgcctccaccgtcgagttccagccgctgtgcgtgaag 440
Query: 662 aagccgcccacggccgggtgcgcgagcacctcc 694
||| ||||||| ||||||||||| |||||||||
Sbjct: 441 aaggcgcccaccgccgggtgcgccagcacctcc 473
>gb|BF474053.1|BF474053 WHE0840_E04_J08ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0840_E04_J08, mRNA sequence
Length = 450
Score = 172 bits (87), Expect = 2e-041
Identities = 179/209 (85%), Gaps = 3/209 (1%)
Strand = Plus / Minus
Query: 485 atggcggccttgatctcccctctctccagctggtcc---ccggcgacctccgtgcccacc 541
|||||||||||||| ||||||||||||| ||| | ||| |||||||| |||||||
Sbjct: 209 atggcggccttgatactccctctctccagccggtgcgtgccgtcgacctccacgcccacc 150
Query: 542 ttccagacgtggcacacgtacctcgcgttgccgtactggtccccgtggcgcgggtggcag 601
||||| |||| | ||||||||| ||||||||||||||||| ||||| |||||||||||
Sbjct: 149 ttccatacgtcggccacgtacctggcgttgccgtactggtcgccgtgcagcgggtggcag 90
Query: 602 atcatgggcacgccctccgacacggcctccacggtggagttccagccgcagtgggtgaag 661
||||| |||||||||||||| | |||||||| || ||||||||||||| ||| ||||||
Sbjct: 89 atcatcggcacgccctccgagatcgcctccaccgtcgagttccagccgctgtgcgtgaag 30
Query: 662 aagccgcccacggccgggtgcgcgagcac 690
||| ||||||| ||||||||||| |||||
Sbjct: 29 aaggcgcccaccgccgggtgcgccagcac 1
>gb|BE425760.1|BE425760 WHE0316_C11_C11ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0316_C11_C11, mRNA
sequence
Length = 372
Score = 170 bits (86), Expect = 8e-041
Identities = 149/170 (87%)
Strand = Plus / Minus
Query: 525 cgacctccgtgcccaccttccagacgtggcacacgtacctcgcgttgccgtactggtccc 584
|||||||| |||||||||||| |||| | ||||||||| ||||||||||||||||| |
Sbjct: 293 cgacctccacgcccaccttccatacgtcggccacgtacctggcgttgccgtactggtcgc 234
Query: 585 cgtggcgcgggtggcagatcatgggcacgccctccgacacggcctccacggtggagttcc 644
|||| |||||||||||||||| |||||||||||||| | |||||||| || |||||||
Sbjct: 233 cgtgcagcgggtggcagatcatcggcacgccctccgagatcgcctccaccgtcgagttcc 174
Query: 645 agccgcagtgggtgaagaagccgcccacggccgggtgcgcgagcacctcc 694
|||||| ||| ||||||||| ||||||| ||||||||||| |||||||||
Sbjct: 173 agccgctgtgcgtgaagaaggcgcccaccgccgggtgcgccagcacctcc 124
>gb|BQ483975.1|BQ483975 WHE3515_A05_B09ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3515_A05_B09, mRNA sequence
Length = 545
Score = 165 bits (83), Expect = 5e-039
Identities = 125/139 (89%)
Strand = Plus / Minus
Query: 556 cacgtacctcgcgttgccgtactggtccccgtggcgcgggtggcagatcatgggcacgcc 615
||||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||
Sbjct: 535 cacgtacctggcgttgccgtactggtcgccgtgcagcgggtggcagatcatcggcacgcc 476
Query: 616 ctccgacacggcctccacggtggagttccagccgcagtgggtgaagaagccgcccacggc 675
||||| | |||||||| |||||||||||||||| ||||||||||||| ||||||| ||
Sbjct: 475 ctccgcgatcgcctccaccgtggagttccagccgctgtgggtgaagaaggcgcccaccgc 416
Query: 676 cgggtgcgcgagcacctcc 694
||||||||| |||||||||
Sbjct: 415 cgggtgcgccagcacctcc 397
>gb|CV765720.1|CV765720 FGAS060107 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 851
Score = 159 bits (80), Expect = 3e-037
Identities = 126/140 (90%), Gaps = 1/140 (0%)
Strand = Plus / Minus
Query: 556 cacgtacctcgcgttgccgtactggtccccgtggcgcgggtggcagatcatgggcacgcc 615
||||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||
Sbjct: 776 cacgtacctggcgttgccgtactggtcgccgtgcagcgggtggcagatcatcggcacgcc 717
Query: 616 ctccgaca-cggcctccacggtggagttccagccgcagtgggtgaagaagccgcccacgg 674
||||| | |||||||||| |||||||||||||||| ||| ||||||||| ||||||| |
Sbjct: 716 ctccgcgatcggcctccaccgtggagttccagccgctgtgcgtgaagaaggcgcccaccg 657
Query: 675 ccgggtgcgcgagcacctcc 694
|||||||||| |||||||||
Sbjct: 656 ccgggtgcgccagcacctcc 637
>gb|CA700350.1|CA700350 wkm1c.pk005.e20 wkm1c Triticum aestivum cDNA clone wkm1c.pk005.e20
5' end, mRNA sequence
Length = 504
Score = 149 bits (75), Expect = 3e-034
Identities = 123/139 (88%)
Strand = Plus / Minus
Query: 556 cacgtacctcgcgttgccgtactggtccccgtggcgcgggtggcagatcatgggcacgcc 615
||||||| | ||||||||||||||||| ||||| |||| ||||||||||| ||||||||
Sbjct: 472 cacgtacttggcgttgccgtactggtcgccgtgcagcggttggcagatcatcggcacgcc 413
Query: 616 ctccgacacggcctccacggtggagttccagccgcagtgggtgaagaagccgcccacggc 675
||||| | |||||||| |||||||||||||||| ||||||||||||| ||||||| ||
Sbjct: 412 ctccgcgatcgcctccaccgtggagttccagccgctgtgggtgaagaaggcgcccaccgc 353
Query: 676 cgggtgcgcgagcacctcc 694
||||||||| |||||||||
Sbjct: 352 cgggtgcgccagcacctcc 334
>gb|BJ281677.1|BJ281677 BJ281677 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr23e01 5', mRNA sequence
Length = 549
Score = 141 bits (71), Expect = 7e-032
Identities = 137/159 (86%)
Strand = Plus / Minus
Query: 536 cccaccttccagacgtggcacacgtacctcgcgttgccgtactggtccccgtggcgcggg 595
|||||||||||||| | |||||||||||| ||||||| | ||||||| ||||| ||||
Sbjct: 436 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 377
Query: 596 tggcagatcatgggcacgccctccgacacggcctccacggtggagttccagccgcagtgg 655
|||| ||||| |||||||||||||||||||| ||||| |||||||||||||||| |||
Sbjct: 376 aggcatatcatcggcacgccctccgacacggcttccaccgtggagttccagccgctgtgc 317
Query: 656 gtgaagaagccgcccacggccgggtgcgcgagcacctcc 694
|||| |||| |||| || || ||||| ||||||||||||
Sbjct: 316 gtgatgaaggcgcctaccgcagggtgggcgagcacctcc 278
Score = 52.0 bits (26), Expect = 5e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 480 tgtcgatggcggccttgatctcccctctctccag 513
|||||||||| |||||||||| ||||||||||||
Sbjct: 507 tgtcgatggcagccttgatcttccctctctccag 474
>gb|BQ578302.1|BQ578302 WHE0301_D03_G05ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0301_D03_G05, mRNA
sequence
Length = 662
Score = 141 bits (71), Expect = 7e-032
Identities = 137/159 (86%)
Strand = Plus / Minus
Query: 536 cccaccttccagacgtggcacacgtacctcgcgttgccgtactggtccccgtggcgcggg 595
|||||||||||||| | |||||||||||| ||||||| | ||||||| ||||| ||||
Sbjct: 299 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 240
Query: 596 tggcagatcatgggcacgccctccgacacggcctccacggtggagttccagccgcagtgg 655
|||| ||||| |||||||||||||||||||| ||||| |||||||||||||||| |||
Sbjct: 239 aggcatatcatcggcacgccctccgacacggcttccaccgtggagttccagccgctgtgc 180
Query: 656 gtgaagaagccgcccacggccgggtgcgcgagcacctcc 694
|||| |||| |||| || || ||||| ||||||||||||
Sbjct: 179 gtgatgaaggcgcctaccgcagggtgggcgagcacctcc 141
Score = 52.0 bits (26), Expect = 5e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 480 tgtcgatggcggccttgatctcccctctctccag 513
|||||||||| |||||||||| ||||||||||||
Sbjct: 370 tgtcgatggcagccttgatcttccctctctccag 337
>gb|CD373574.1|CD373574 WHE0425_A04_A07ZT CS wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0425_A04_A07, mRNA
sequence
Length = 680
Score = 141 bits (71), Expect = 7e-032
Identities = 137/159 (86%)
Strand = Plus / Plus
Query: 536 cccaccttccagacgtggcacacgtacctcgcgttgccgtactggtccccgtggcgcggg 595
|||||||||||||| | |||||||||||| ||||||| | ||||||| ||||| ||||
Sbjct: 328 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 387
Query: 596 tggcagatcatgggcacgccctccgacacggcctccacggtggagttccagccgcagtgg 655
|||| ||||| |||||||||||||||||||| ||||| |||||||||||||||| |||
Sbjct: 388 aggcatatcatcggcacgccctccgacacggcttccaccgtggagttccagccgctgtgc 447
Query: 656 gtgaagaagccgcccacggccgggtgcgcgagcacctcc 694
|||| |||| |||| || || ||||| ||||||||||||
Sbjct: 448 gtgatgaaggcgcctaccgcagggtgggcgagcacctcc 486
Score = 52.0 bits (26), Expect = 5e-005
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 480 tgtcgatggcggccttgatctcccctctctccag 513
|||||||||| |||||||||| ||||||||||||
Sbjct: 257 tgtcgatggcagccttgatcttccctctctccag 290
>gb|CD865781.1|CD865781 AZO2.101M06F001124 AZO2 Triticum aestivum cDNA clone AZO2101M06,
mRNA sequence
Length = 723
Score = 139 bits (70), Expect = 3e-031
Identities = 136/158 (86%)
Strand = Plus / Minus
Query: 537 ccaccttccagacgtggcacacgtacctcgcgttgccgtactggtccccgtggcgcgggt 596
||||||||||||| | |||||||||||| ||||||| | ||||||| ||||| ||||
Sbjct: 580 ccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggga 521
Query: 597 ggcagatcatgggcacgccctccgacacggcctccacggtggagttccagccgcagtggg 656
|||| ||||| |||||||||||||||||||| ||||| |||||||||||||||| ||| |
Sbjct: 520 ggcatatcatcggcacgccctccgacacggcttccaccgtggagttccagccgctgtgcg 461
Query: 657 tgaagaagccgcccacggccgggtgcgcgagcacctcc 694
||| |||| |||| || || ||||| ||||||||||||
Sbjct: 460 tgatgaaggcgcctaccgcagggtgggcgagcacctcc 423
Score = 52.0 bits (26), Expect = 5e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 480 tgtcgatggcggccttgatctcccctctctccag 513
|||||||||| |||||||||| ||||||||||||
Sbjct: 653 tgtcgatggcagccttgatcttccctctctccag 620
>gb|BG313174.1|BG313174 WHE2054_F07_L14ZS Wheat salt-stressed sheath cDNA library Triticum
aestivum cDNA clone WHE2054_F07_L14, mRNA sequence
Length = 376
Score = 133 bits (67), Expect = 2e-029
Identities = 145/170 (85%), Gaps = 1/170 (0%)
Strand = Plus / Minus
Query: 525 cgacctccgtgcccaccttccagacgtggcacacgtacctcgcgttgccgtactggtccc 584
|||||||| |||||||||||| |||| | ||||||||| ||||||||||||||||| |
Sbjct: 317 cgacctccacgcccaccttccacacgtcggccacgtacctggcgttgccgtactggtcgc 258
Query: 585 cgtggcgcgggtggcagatcatgggcacgccctccgacacggcctccacggtggagttcc 644
|||| ||||| |||||||| ||||||||||||| | |||||||| ||||||||||
Sbjct: 257 cgtgcagcgggcc-cagatcatcggcacgccctccgcgatcgcctccacngtggagttcc 199
Query: 645 agccgcagtgggtgaagaagccgcccacggccgggtgcgcgagcacctcc 694
| |||| ||| ||||||||| ||||||| ||||||||||| |||||||||
Sbjct: 198 acccgctgtgcgtgaagaaggcgcccaccgccgggtgcgccagcacctcc 149
>gb|CD867745.1|CD867745 AZO2.107B06R010328 AZO2 Triticum aestivum cDNA clone AZO2107B06,
mRNA sequence
Length = 542
Score = 133 bits (67), Expect = 2e-029
Identities = 136/159 (85%)
Strand = Plus / Plus
Query: 536 cccaccttccagacgtggcacacgtacctcgcgttgccgtactggtccccgtggcgcggg 595
|||||||||||||| | |||||||||||| ||||||| | ||||||| ||||| ||||
Sbjct: 324 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 383
Query: 596 tggcagatcatgggcacgccctccgacacggcctccacggtggagttccagccgcagtgg 655
|||| ||||| |||||||||||||||||||| ||||| |||||||||||||||| | |
Sbjct: 384 aggcatatcatcggcacgccctccgacacggcttccaccgtggagttccagccgctgcgc 443
Query: 656 gtgaagaagccgcccacggccgggtgcgcgagcacctcc 694
|||| |||| |||| || || ||||| ||||||||||||
Sbjct: 444 gtgatgaaggcgcctaccgcagggtgggcgagcacctcc 482
Score = 52.0 bits (26), Expect = 5e-005
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 480 tgtcgatggcggccttgatctcccctctctccag 513
|||||||||| |||||||||| ||||||||||||
Sbjct: 253 tgtcgatggcagccttgatcttccctctctccag 286
>gb|CK193504.1|CK193504 FGAS001918 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 821
Score = 133 bits (67), Expect = 2e-029
Identities = 136/159 (85%)
Strand = Plus / Minus
Query: 536 cccaccttccagacgtggcacacgtacctcgcgttgccgtactggtccccgtggcgcggg 595
|||||||||||||| | |||||||||||| ||||||| | ||||||| ||||| ||||
Sbjct: 564 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 505
Query: 596 tggcagatcatgggcacgccctccgacacggcctccacggtggagttccagccgcagtgg 655
|||| ||||| |||||||||||||||||||| ||||| |||||||||||||||| |||
Sbjct: 504 aggcatatcatcggcacgccctccgacacggcttccaccgtggagttccagccgctgtgc 445
Query: 656 gtgaagaagccgcccacggccgggtgcgcgagcacctcc 694
|||| |||| |||| || || || || ||||||||||||
Sbjct: 444 gtgatgaaggcgcctaccgcaggatgggcgagcacctcc 406
Score = 52.0 bits (26), Expect = 5e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 480 tgtcgatggcggccttgatctcccctctctccag 513
|||||||||| |||||||||| ||||||||||||
Sbjct: 635 tgtcgatggcagccttgatcttccctctctccag 602
>gb|CA615942.1|CA615942 wr1.pk166.f6 wr1 Triticum aestivum cDNA clone wr1.pk166.f6 5' end,
mRNA sequence
Length = 464
Score = 129 bits (65), Expect = 3e-028
Identities = 130/152 (85%)
Strand = Plus / Minus
Query: 536 cccaccttccagacgtggcacacgtacctcgcgttgccgtactggtccccgtggcgcggg 595
|||||||||||||| | |||||||||||| ||||||| | ||||||| ||||| ||||
Sbjct: 152 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 93
Query: 596 tggcagatcatgggcacgccctccgacacggcctccacggtggagttccagccgcagtgg 655
|||| ||||| |||||||||||||||||||| ||||| |||||||||||||||| |||
Sbjct: 92 aggcatatcatcggcacgccctccgacacggcntccaccgtggagttccagccgctgtgc 33
Query: 656 gtgaagaagccgcccacggccgggtgcgcgag 687
|||| |||| |||| || || ||||| |||||
Sbjct: 32 gtgatgaaggcgcctaccgcagggtgggcgag 1
Score = 52.0 bits (26), Expect = 5e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 480 tgtcgatggcggccttgatctcccctctctccag 513
|||||||||| |||||||||| ||||||||||||
Sbjct: 223 tgtcgatggcagccttgatcttccctctctccag 190
>gb|CA615835.1|CA615835 wr1.pk169.d2 wr1 Triticum aestivum cDNA clone wr1.pk169.d2 5' end,
mRNA sequence
Length = 521
Score = 127 bits (64), Expect = 1e-027
Identities = 137/160 (85%), Gaps = 1/160 (0%)
Strand = Plus / Minus
Query: 536 cccaccttccagacgtggcacacgtacctcgcgttgcc-gtactggtccccgtggcgcgg 594
|||||||||||||| | |||||||||||| ||||||| | ||||||| ||||| |||
Sbjct: 223 cccaccttccagacatcgcacacgtacctggcgttgcttgaactggtctccgtgcaacgg 164
Query: 595 gtggcagatcatgggcacgccctccgacacggcctccacggtggagttccagccgcagtg 654
| |||| ||||| |||||||||||||||||||| ||||| |||||||||||||||| |||
Sbjct: 163 gaggcatatcatcggcacgccctccgacacggcttccaccgtggagttccagccgctgtg 104
Query: 655 ggtgaagaagccgcccacggccgggtgcgcgagcacctcc 694
|||| |||| |||| || || ||||| ||||||||||||
Sbjct: 103 cgtgatgaaggcgcctaccgcagggtgggcgagcacctcc 64
>gb|BE405606.1|BE405606 WHE1209_C09_E17ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1209_C09_E17, mRNA
sequence
Length = 634
Score = 125 bits (63), Expect = 4e-027
Identities = 129/151 (85%)
Strand = Plus / Minus
Query: 544 ccagacgtggcacacgtacctcgcgttgccgtactggtccccgtggcgcgggtggcagat 603
|||||| | |||||||||||| ||||||| | ||||||| ||||| |||| |||| ||
Sbjct: 634 ccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacgggaggcatat 575
Query: 604 catgggcacgccctccgacacggcctccacggtggagttccagccgcagtgggtgaagaa 663
||| |||||||||||||||||||| ||||| |||||||||||||||| ||| |||| |||
Sbjct: 574 catcggcacgccctccgacacggcttccaccgtggagttccagccgctgtgcgtgatgaa 515
Query: 664 gccgcccacggccgggtgcgcgagcacctcc 694
| |||| || || ||||| ||||||||||||
Sbjct: 514 ggcgcctaccgcagggtgggcgagcacctcc 484
>gb|BE406114.1|BE406114 WHE0404_c07_c07zB Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0404_c07_c07, mRNA
sequence
Length = 385
Score = 125 bits (63), Expect = 4e-027
Identities = 135/159 (84%)
Strand = Plus / Minus
Query: 536 cccaccttccagacgtggcacacgtacctcgcgttgccgtactggtccccgtggcgcggg 595
|||||||||||||| | |||||||||||| ||||||| | ||||||| ||||| ||||
Sbjct: 375 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 316
Query: 596 tggcagatcatgggcacgccctccgacacggcctccacggtggagttccagccgcagtgg 655
|||| ||||| |||||||||||||||||||| ||||| |||||||||||||||| |||
Sbjct: 315 aggcatatcatcggcacgccctccgacacggcttccaccgtggagttccagccgctgtgc 256
Query: 656 gtgaagaagccgcccacggccgggtgcgcgagcacctcc 694
|||| ||| ||| || || ||||| ||||||||||||
Sbjct: 255 gtgatgaaaaagcctaccgcagggtgggcgagcacctcc 217
>gb|BQ743938.1|BQ743938 WHE4109_H10_O19ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4109_H10_O19, mRNA sequence
Length = 656
Score = 123 bits (62), Expect = 2e-026
Identities = 122/142 (85%)
Strand = Plus / Minus
Query: 553 gcacacgtacctcgcgttgccgtactggtccccgtggcgcgggtggcagatcatgggcac 612
|||||||||||| ||||||| | ||||||| ||||| |||| |||| ||||| |||||
Sbjct: 648 gcacacgtacctggcgttgctgaactggtctccgtgcaacgggaggcatatcatcggcac 589
Query: 613 gccctccgacacggcctccacggtggagttccagccgcagtgggtgaagaagccgcccac 672
||||||||||||||| ||||| |||||||||||||||| ||| |||| |||| |||| ||
Sbjct: 588 gccctccgacacggcttccaccgtggagttccagccgctgtgcgtgatgaaggcgcctac 529
Query: 673 ggccgggtgcgcgagcacctcc 694
|| ||||| ||||||||||||
Sbjct: 528 cgcagggtgggcgagcacctcc 507
>gb|CA604693.1|CA604693 wr1.pk0043.b10 wr1 Triticum aestivum cDNA clone wr1.pk0043.b10 5'
end, mRNA sequence
Length = 708
Score = 121 bits (61), Expect = 7e-026
Identities = 112/129 (86%)
Strand = Plus / Minus
Query: 536 cccaccttccagacgtggcacacgtacctcgcgttgccgtactggtccccgtggcgcggg 595
|||||||||||||| | |||||||||||| ||||||| | ||||||| ||||| ||||
Sbjct: 130 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 71
Query: 596 tggcagatcatgggcacgccctccgacacggcctccacggtggagttccagccgcagtgg 655
|||| ||||| |||||||||||||||||||| ||||| |||||||||||||||| |||
Sbjct: 70 aggcatatcatcggcacgccctccgacacggcttccaccgtggagttccagccgctgtgc 11
Query: 656 gtgaagaag 664
|||| ||||
Sbjct: 10 gtgatgaag 2
Score = 52.0 bits (26), Expect = 5e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 480 tgtcgatggcggccttgatctcccctctctccag 513
|||||||||| |||||||||| ||||||||||||
Sbjct: 201 tgtcgatggcagccttgatcttccctctctccag 168
>gb|CA630327.1|CA630327 wle1n.pk0032.d11 wle1n Triticum aestivum cDNA clone
wle1n.pk0032.d11 5' end, mRNA sequence
Length = 508
Score = 117 bits (59), Expect = 1e-024
Identities = 101/115 (87%)
Strand = Plus / Minus
Query: 536 cccaccttccagacgtggcacacgtacctcgcgttgccgtactggtccccgtggcgcggg 595
|||||||||||||| | |||||||||||| ||||||| | ||||||| ||||| ||||
Sbjct: 116 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 57
Query: 596 tggcagatcatgggcacgccctccgacacggcctccacggtggagttccagccgc 650
|||| ||||| |||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 56 aggcatatcatcggcacgccctccgacacggcttccaccgtggagttccagccgc 2
Score = 52.0 bits (26), Expect = 5e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 480 tgtcgatggcggccttgatctcccctctctccag 513
|||||||||| |||||||||| ||||||||||||
Sbjct: 187 tgtcgatggcagccttgatcttccctctctccag 154
>gb|CA720605.1|CA720605 wkm2n.pk007.f4 wkm2n Triticum aestivum cDNA clone wkm2n.pk007.f4 5'
end, mRNA sequence
Length = 342
Score = 103 bits (52), Expect = 2e-020
Identities = 133/160 (83%), Gaps = 1/160 (0%)
Strand = Plus / Minus
Query: 536 cccaccttccagacgtggcacacgtacctcg-cgttgccgtactggtccccgtggcgcgg 594
||||| |||||||| ||||||| |||||| | ||||| | | ||||| ||||| |||
Sbjct: 273 cccactttccagacatggcacangtaccttggcgttgntgaantggtctccgtgcaacgg 214
Query: 595 gtggcagatcatgggcacgccctccgacacggcctccacggtggagttccagccgcagtg 654
| |||| ||||| ||||||||||| |||||||| ||||| |||||||||||||||| |||
Sbjct: 213 gaggcatatcatnggcacgccctcggacacggcttccaccgtggagttccagccgctgtg 154
Query: 655 ggtgaagaagccgcccacggccgggtgcgcgagcacctcc 694
|||| |||| |||| || || ||||| ||||||||||||
Sbjct: 153 cgtgatgaaggcgcctaccgcagggtgggcgagcacctcc 114
>gb|CA719066.1|CA719066 wkm2n.pk003.n22 wkm2n Triticum aestivum cDNA clone wkm2n.pk003.n22
5' end, mRNA sequence
Length = 470
Score = 97.6 bits (49), Expect = 1e-018
Identities = 134/161 (83%), Gaps = 2/161 (1%)
Strand = Plus / Minus
Query: 536 cccaccttccagacgtggcacacgtacctcgcgttgccgtactggtccccgtggcgcggg 595
||||| |||||||| | |||||||||||| ||||||| | ||||||| ||||| ||||
Sbjct: 322 cccacnttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 263
Query: 596 tggcagatcatgggcacgccctccgacacggcctccacggt-ggagttccagccgcagtg 654
|||| ||||| |||| ||||||||||||||| ||||| || |||||||||||||| |||
Sbjct: 262 aggcatatcatcggcangccctccgacacggcttccacngttggagttccagccgctgtg 203
Query: 655 ggtgaagaagccgcccacg-gccgggtgcgcgagcacctcc 694
|||| |||| ||| || || ||||| ||||||||||||
Sbjct: 202 cgtgatgaaggcgcntacccgcagggtgggcgagcacctcc 162
Score = 46.1 bits (23), Expect = 0.003
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 480 tgtcgatggcggccttgatctcccctctctccag 513
|||||||||| |||||||| | ||||||||||||
Sbjct: 393 tgtcgatggcagccttgatnttccctctctccag 360
>gb|CA604032.1|CA604032 wr1.pk0033.e10 wr1 Triticum aestivum cDNA clone wr1.pk0033.e10 5'
end, mRNA sequence
Length = 469
Score = 91.7 bits (46), Expect = 6e-017
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 536 cccaccttccagacgtggcacacgtacctcgcgttgccgtactggtccccgtggcgcggg 595
|||||||||||||| | |||||||||||| ||||||| | ||||||| ||||| ||||
Sbjct: 102 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 43
Query: 596 tggcagatcatgggcacgccctccgacacggcctccac 633
|||| ||||| |||||||||||||||||||| |||||
Sbjct: 42 aggcatatcatcggcacgccctccgacacggcttccac 5
Score = 52.0 bits (26), Expect = 5e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 480 tgtcgatggcggccttgatctcccctctctccag 513
|||||||||| |||||||||| ||||||||||||
Sbjct: 173 tgtcgatggcagccttgatcttccctctctccag 140
>gb|CA633057.1|CA633057 wle1n.pk0065.f6 wle1n Triticum aestivum cDNA clone wle1n.pk0065.f6
5' end, mRNA sequence
Length = 505
Score = 89.7 bits (45), Expect = 2e-016
Identities = 84/97 (86%)
Strand = Plus / Minus
Query: 536 cccaccttccagacgtggcacacgtacctcgcgttgccgtactggtccccgtggcgcggg 595
|||||||||||||| | |||||||||||| ||||||| | ||||||| ||||| ||||
Sbjct: 97 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 38
Query: 596 tggcagatcatgggcacgccctccgacacggcctcca 632
|||| ||||| |||||||||||||||||||| ||||
Sbjct: 37 aggcatatcatcggcacgccctccgacacggcttcca 1
Score = 52.0 bits (26), Expect = 5e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 480 tgtcgatggcggccttgatctcccctctctccag 513
|||||||||| |||||||||| ||||||||||||
Sbjct: 168 tgtcgatggcagccttgatcttccctctctccag 135
>gb|CA654049.1|CA654049 wre1n.pk162.d8 wre1n Triticum aestivum cDNA clone wre1n.pk162.d8 5'
end, mRNA sequence
Length = 364
Score = 87.7 bits (44), Expect = 9e-016
Identities = 107/126 (84%), Gaps = 4/126 (3%)
Strand = Plus / Minus
Query: 485 atggcggccttgatctcccctctctcc-agctggtcc---ccggcgacctccgtgcccac 540
||||||||||||||| |||||||||| ||| ||| | ||| |||||||| ||||||
Sbjct: 127 atggcggccttgatcctccctctctcccagccggtgcgagccgtcgacctccacgcccac 68
Query: 541 cttccagacgtggcacacgtacctcgcgttgccgtactggtccccgtggcgcgggtggca 600
| ||||||||| | ||||||||| ||||||||||||||||| ||||| ||||||||||
Sbjct: 67 cctccagacgtcggccacgtacctggcgttgccgtactggtcgccgtgcagcgggtggca 8
Query: 601 gatcat 606
||||||
Sbjct: 7 gatcat 2
>gb|CD867744.1|CD867744 AZO2.107B06F001113 AZO2 Triticum aestivum cDNA clone AZO2107B06,
mRNA sequence
Length = 530
Score = 77.8 bits (39), Expect = 9e-013
Identities = 85/99 (85%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 597 ggcagatcatgggcacgccctccgacacggcctccacggtgg-agttccagccgcagtgg 655
|||| ||||| ||||||||||||||| |||| ||||| |||| |||||||||||| |||
Sbjct: 520 ggcatatcatcggcacgccctccgacgcggcttccaccgtgggagttccagccgctgtgc 461
Query: 656 gtgaagaagccgcccacggccgggtgcgcgagcacctcc 694
|||| |||| |||| || || ||||| ||||||||||||
Sbjct: 460 gtgatgaaggcgcctaccgcagggtgggcgagcacctcc 422
>gb|CK163295.1|CK163295 FGAS015917 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1073
Score = 73.8 bits (37), Expect = 1e-011
Identities = 84/99 (84%), Gaps = 3/99 (3%)
Strand = Plus / Minus
Query: 485 atggcggccttgatctcccctctctccagctggtcc---ccggcgacctccgtgcccacc 541
||||||||||||||| ||||||||||||| ||| | ||| |||||||| |||||||
Sbjct: 117 atggcggccttgatcctccctctctccagccggtgcgagccgtcgacctccacgcccacc 58
Query: 542 ttccagacgtggcacacgtacctcgcgttgccgtactgg 580
||||||||| | ||||||||| |||||||||||||||
Sbjct: 57 ctccagacgtcggccacgtacctggcgttgccgtactgg 19
>gb|CA615191.1|CA615191 wr1.pk178.a6 wr1 Triticum aestivum cDNA clone wr1.pk178.a6 5' end,
mRNA sequence
Length = 404
Score = 71.9 bits (36), Expect = 6e-011
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 536 cccaccttccagacgtggcacacgtacctcgcgttgccgtactggtccccgtggcgcggg 595
|||||||||||||| | |||||||||||| ||||||| | ||||||| ||||| ||||
Sbjct: 84 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtgcaacggg 25
Query: 596 tggcagatcatgggcacgccctcc 619
|||| ||||| ||||||||||||
Sbjct: 24 aggcatatcatcggcacgccctcc 1
Score = 52.0 bits (26), Expect = 5e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 480 tgtcgatggcggccttgatctcccctctctccag 513
|||||||||| |||||||||| ||||||||||||
Sbjct: 155 tgtcgatggcagccttgatcttccctctctccag 122
>gb|CK216261.1|CK216261 FGAS028248 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1093
Score = 65.9 bits (33), Expect = 3e-009
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 635 gtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcg 683
|||||||||||||| ||||| || |||||||||||||| ||||||||||
Sbjct: 462 gtggagttccagccacagtgcgtcaagaagccgcccaccgccgggtgcg 510
>gb|CA625114.1|CA625114 wl1n.pk0123.c12 wl1n Triticum aestivum cDNA clone wl1n.pk0123.c12
5' end, mRNA sequence
Length = 503
Score = 63.9 bits (32), Expect = 1e-008
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 622 cacggcctccacggtggagttccagccgcagtgggtgaagaagccgcccacggccgggtg 681
||||||||||| ||||||||||| |||||||| |||| ||| |||||||| ||||||||
Sbjct: 139 cacggcctccagcgtggagttccacccgcagtgcgtgacgaacccgcccaccgccgggtg 80
>gb|CA636643.1|CA636643 wle1n.pk0111.c6 wle1n Triticum aestivum cDNA clone wle1n.pk0111.c6
5' end, mRNA sequence
Length = 394
Score = 58.0 bits (29), Expect = 8e-007
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 536 cccaccttccagacgtggcacacgtacctcgcgttgccgtactggtccccgtg 588
|||||||||||||| | |||||||||||| ||||||| | ||||||| |||||
Sbjct: 73 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtg 21
Score = 52.0 bits (26), Expect = 5e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 480 tgtcgatggcggccttgatctcccctctctccag 513
|||||||||| |||||||||| ||||||||||||
Sbjct: 144 tgtcgatggcagccttgatcttccctctctccag 111
>gb|CD882790.1|CD882790 F1.111D15F010430 F1 Triticum aestivum cDNA clone F1111D15, mRNA
sequence
Length = 730
Score = 58.0 bits (29), Expect = 8e-007
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 622 cacggcctccacggtggagttccagccgcagtgggtgaagaagccgcccacggccgggtg 681
|||| |||||||||| |||||||| |||||||| | | ||||| | |||||||||||||
Sbjct: 478 cacgccctccacggtcgagttccacccgcagtgcgacacgaagcaggccacggccgggtg 419
Query: 682 cgcgagcac 690
|| ||||||
Sbjct: 418 cgagagcac 410
>gb|CK195337.1|CK195337 FGAS003776 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 834
Score = 58.0 bits (29), Expect = 8e-007
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 536 cccaccttccagacgtggcacacgtacctcgcgttgccgtactggtccccgtg 588
|||||||||||||| | |||||||||||| ||||||| | ||||||| |||||
Sbjct: 170 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtctccgtg 118
Score = 52.0 bits (26), Expect = 5e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 480 tgtcgatggcggccttgatctcccctctctccag 513
|||||||||| |||||||||| ||||||||||||
Sbjct: 241 tgtcgatggcagccttgatcttccctctctccag 208
>gb|BJ231129.1|BJ231129 BJ231129 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl25i23 3', mRNA sequence
Length = 613
Score = 56.0 bits (28), Expect = 3e-006
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 635 gtggagttccagccgcagtgggtgaagaagccgcccacggccgggtg 681
|||||||||||||||| ||| |||| ||| ||||||||||||||||
Sbjct: 561 gtggagttccagccgctgtgcgtgatgaangcgcccacggccgggtg 607
>gb|BU101240.1|BU101240 WHE3366_E07_J14ZS Chinese Spring aluminum-stressed root tip cDNA
library Triticum aestivum cDNA clone WHE3366_E07_J14,
mRNA sequence
Length = 495
Score = 54.0 bits (27), Expect = 1e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 536 cccaccttccagacgtggcacacgtacctcgcgttgccgtactggtc 582
|||||||||||||| | |||||||||||| ||||||| | |||||||
Sbjct: 63 cccaccttccagacatcgcacacgtacctggcgttgctgaactggtc 17
Score = 52.0 bits (26), Expect = 5e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 480 tgtcgatggcggccttgatctcccctctctccag 513
|||||||||| |||||||||| ||||||||||||
Sbjct: 134 tgtcgatggcagccttgatcttccctctctccag 101
>gb|BJ286771.1|BJ286771 BJ286771 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr23e01 3', mRNA sequence
Length = 389
Score = 52.0 bits (26), Expect = 5e-005
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 480 tgtcgatggcggccttgatctcccctctctccag 513
|||||||||| |||||||||| ||||||||||||
Sbjct: 328 tgtcgatggcagccttgatcttccctctctccag 361
>gb|CA498569.1|CA498569 WHE3245_A12_A23ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE3245_A12_A23, mRNA sequence
Length = 433
Score = 52.0 bits (26), Expect = 5e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 480 tgtcgatggcggccttgatctcccctctctccag 513
|||||||||| |||||||||| ||||||||||||
Sbjct: 81 tgtcgatggcagccttgatcttccctctctccag 48
>gb|CA648669.1|CA648669 wre1n.pk0124.b2 wre1n Triticum aestivum cDNA clone wre1n.pk0124.b2
5' end, mRNA sequence
Length = 443
Score = 52.0 bits (26), Expect = 5e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 480 tgtcgatggcggccttgatctcccctctctccag 513
|||||||||| |||||||||| ||||||||||||
Sbjct: 99 tgtcgatggcagccttgatcttccctctctccag 66
Score = 40.1 bits (20), Expect = 0.20
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 536 cccaccttccagacgtggcacacgtacc 563
|||||||||||||| | |||||||||||
Sbjct: 28 cccaccttccagacatcgcacacgtacc 1
>gb|CK196273.1|CK196273 FGAS004727 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 868
Score = 52.0 bits (26), Expect = 5e-005
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 480 tgtcgatggcggccttgatctcccctctctccag 513
|||||||||| |||||||||| ||||||||||||
Sbjct: 388 tgtcgatggcagccttgatcttccctctctccag 421
>gb|DN829308.1|DN829308 KUCD01_10_F05_T3 WSWR cDNA library Triticum aestivum cDNA, mRNA
sequence
Length = 900
Score = 52.0 bits (26), Expect = 5e-005
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 480 tgtcgatggcggccttgatctcccctctctccag 513
|||||||||| |||||||||| ||||||||||||
Sbjct: 395 tgtcgatggcagccttgatcttccctctctccag 428
>gb|BE516604.1|BE516604 WHE0630_B10_C20ZA Wheat ABA-treated embryo cDNA library Triticum
aestivum cDNA clone WHE0630_B10_C20, mRNA sequence
Length = 114
Score = 50.1 bits (25), Expect = 2e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 526 gacctccgtgcccaccttccagacgtggcacacgtacctcgcgttgccgtactggtc 582
||||||| |||||||||||| |||| | ||||||||| |||||||||| ||||||
Sbjct: 57 gacctccacgcccaccttccacacgtcggccacgtacctggcgttgccgtgctggtc 113
>gb|BJ230352.1|BJ230352 BJ230352 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl22g03 3', mRNA sequence
Length = 562
Score = 50.1 bits (25), Expect = 2e-004
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 635 gtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcg 683
||||||||||| |||||||| || | ||||||||||| ||||||||||
Sbjct: 470 gtggagttccacccgcagtgcgtcagaaagccgcccaccgccgggtgcg 518
>gb|BQ803441.1|BQ803441 WHE2837_F11_K21ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2837_F11_K21, mRNA
sequence
Length = 715
Score = 50.1 bits (25), Expect = 2e-004
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 622 cacggcctccacggtggagttccagccgcagtgggtgaagaagccgcccacggccgggtg 681
|||| |||||||||| |||||||| || ||||| | | ||||| | |||||||||||||
Sbjct: 393 cacgccctccacggtcgagttccacccacagtgcgacacgaagcaggccacggccgggtg 334
Query: 682 cgcgagcac 690
|| ||||||
Sbjct: 333 cgagagcac 325
>gb|CD881956.1|CD881956 F1.104N12F010330 F1 Triticum aestivum cDNA clone F1104N12, mRNA
sequence
Length = 662
Score = 50.1 bits (25), Expect = 2e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 635 gtggagttccagccgcagtgggtgaagaagccgcccacggccgggtgcgcgagcacc 691
|||||||||||||||||||| |||| ||||| || || ||||||||||||||||
Sbjct: 115 gtggagttccagccgcagtgcgtgaggaagcacgccgtggacgggtgcgcgagcacc 59
>gb|BE445412.1|BE445412 WHE1136_C06_F12ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1136_C06_F12,
mRNA sequence
Length = 531
Score = 48.1 bits (24), Expect = 8e-004
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 628 ctccacggtggagttccagccgcagtgg 655
||||||||| ||||||||||||||||||
Sbjct: 95 ctccacggtcgagttccagccgcagtgg 68
>gb|BM134647.1|BM134647 WHE0451_E03_E03ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0451_E03_E03,
mRNA sequence
Length = 344
Score = 48.1 bits (24), Expect = 8e-004
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 638 gagttccagccgcagtgggtgaagaagccgcccacggccgggtg 681
||||||||||||| |||||| | |||| |||||||||| |||||
Sbjct: 209 gagttccagccgctgtgggtcaggaaggcgcccacggcggggtg 166
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 150,391
Number of Sequences: 636343
Number of extensions: 150391
Number of successful extensions: 40661
Number of sequences better than 0.5: 65
Number of HSP's better than 0.5 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40514
Number of HSP's gapped (non-prelim): 130
length of query: 694
length of database: 367,240,239
effective HSP length: 19
effective length of query: 675
effective length of database: 355,149,722
effective search space: 239726062350
effective search space used: 239726062350
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)