BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478084.2.1
(1395 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA621430.1|CA621430 wl1n.pk0065.c8 wl1n Triticum aestivu... 739 0.0
gb|BQ837961.1|BQ837961 WHE2905_A03_A05ZS Wheat aluminum-str... 617 e-175
gb|CA625239.1|CA625239 wl1n.pk0129.d3 wl1n Triticum aestivu... 601 e-170
gb|BQ806052.1|BQ806052 WHE3574_C01_F02ZS Wheat developing g... 571 e-161
gb|CA617928.1|CA617928 wl1n.pk0026.d12 wl1n Triticum aestiv... 504 e-141
gb|CD928159.1|CD928159 GR45.104C12R010608 GR45 Triticum aes... 468 e-130
gb|BQ744105.1|BQ744105 WHE4111_G08_N15ZS Wheat salt-stresse... 446 e-123
gb|CD937391.1|CD937391 OV.106O01R010430 OV Triticum aestivu... 428 e-118
gb|CK193498.1|CK193498 FGAS001912 Triticum aestivum FGAS: L... 420 e-115
gb|CK193153.1|CK193153 FGAS001567 Triticum aestivum FGAS: L... 414 e-114
gb|CV763616.1|CV763616 FGAS057999 Triticum aestivum FGAS: L... 392 e-107
gb|CD882469.1|CD882469 F1.106O03R010628 F1 Triticum aestivu... 361 9e-098
gb|CV782592.1|CV782592 FGAS077005 Triticum aestivum FGAS: L... 357 1e-096
gb|AJ614336.1|AJ614336 AJ614336 Triticum turgidum subsp. du... 325 5e-087
gb|BE415761.1|BE415761 MWL037.B06000418 ITEC MWL Wheat Root... 317 1e-084
gb|BJ280998.1|BJ280998 BJ280998 Y. Ogihara unpublished cDNA... 274 2e-071
gb|BJ281022.1|BJ281022 BJ281022 Y. Ogihara unpublished cDNA... 274 2e-071
gb|BJ286059.1|BJ286059 BJ286059 Y. Ogihara unpublished cDNA... 274 2e-071
gb|CK199443.1|CK199443 FGAS007942 Triticum aestivum FGAS: L... 274 2e-071
gb|CA616478.1|CA616478 wl1n.pk0003.f4 wl1n Triticum aestivu... 230 2e-058
gb|CD883568.1|CD883568 F1.113M06F010531 F1 Triticum aestivu... 194 1e-047
gb|BE420307.1|BE420307 WWS05.B4R000101 ITEC WWS Wheat Scute... 186 3e-045
gb|CA691704.1|CA691704 wlm96.pk054.i11 wlm96 Triticum aesti... 182 4e-044
gb|CK206040.1|CK206040 FGAS017615 Triticum aestivum FGAS: L... 167 3e-039
gb|CK211037.1|CK211037 FGAS022865 Triticum aestivum FGAS: L... 147 2e-033
gb|BE515450.1|BE515450 WHE0613_F07_K13ZA Wheat ABA-treated ... 141 1e-031
gb|CA678229.1|CA678229 wlm12.pk0025.g2 wlm12 Triticum aesti... 135 9e-030
gb|CD937367.1|CD937367 OV.106M21F010202 OV Triticum aestivu... 133 4e-029
gb|CA614785.1|CA614785 wr1.pk177.h6 wr1 Triticum aestivum c... 123 3e-026
gb|BJ286085.1|BJ286085 BJ286085 Y. Ogihara unpublished cDNA... 109 5e-022
gb|CK206184.1|CK206184 FGAS017763 Triticum aestivum FGAS: L... 109 5e-022
gb|CV777285.1|CV777285 FGAS071690 Triticum aestivum FGAS: L... 109 5e-022
gb|BQ804331.1|BQ804331 WHE3553_C05_F09ZS Wheat developing g... 105 8e-021
gb|CA726875.1|CA726875 wde1f.pk002.k1 wde1f Triticum aestiv... 105 8e-021
gb|AL822978.1|AL822978 AL822978 p:335 Triticum aestivum cDN... 103 3e-020
gb|CD882468.1|CD882468 F1.106O03F010330 F1 Triticum aestivu... 101 1e-019
gb|CD928158.1|CD928158 GR45.104C12F010316 GR45 Triticum aes... 101 1e-019
gb|CK200551.1|CK200551 FGAS009067 Triticum aestivum FGAS: L... 94 3e-017
gb|CV774140.1|CV774140 FGAS068537 Triticum aestivum FGAS: L... 94 3e-017
gb|CA693740.1|CA693740 wlmk4.pk0007.c8 wlmk4 Triticum aesti... 88 2e-015
gb|CK200258.1|CK200258 FGAS008768 Triticum aestivum FGAS: L... 86 8e-015
gb|CV762236.1|CV762236 FGAS056625 Triticum aestivum FGAS: L... 86 8e-015
gb|CV780967.1|CV780967 FGAS075378 Triticum aestivum FGAS: L... 86 8e-015
gb|CK199238.1|CK199238 FGAS007732 Triticum aestivum FGAS: L... 80 5e-013
gb|CK199765.1|CK199765 FGAS008272 Triticum aestivum FGAS: L... 70 5e-010
gb|CA733196.1|CA733196 wlp1c.pk007.l14 wlp1c Triticum aesti... 60 4e-007
gb|CA729853.1|CA729853 wip1c.pk002.c21 wip1c Triticum aesti... 52 1e-004
gb|CA695532.1|CA695532 wlmk8.pk0011.a3 wlmk8 Triticum aesti... 50 4e-004
gb|CV768301.1|CV768301 FGAS062692 Triticum aestivum FGAS: L... 50 4e-004
gb|BE405852.1|BE405852 WHE0425_A06_A11ZS Wheat etiolated se... 48 0.002
gb|BE446151.1|BE446151 WHE1142_F12_K24ZS Wheat etiolated se... 48 0.002
gb|BJ255901.1|BJ255901 BJ255901 Y. Ogihara unpublished cDNA... 48 0.002
gb|BJ261426.1|BJ261426 BJ261426 Y. Ogihara unpublished cDNA... 48 0.002
gb|BJ288336.1|BJ288336 BJ288336 Y. Ogihara unpublished cDNA... 48 0.002
gb|BJ296657.1|BJ296657 BJ296657 Y. Ogihara unpublished cDNA... 48 0.002
gb|CA617794.1|CA617794 wl1n.pk0025.g6 wl1n Triticum aestivu... 48 0.002
gb|CA617795.1|CA617795 wl1n.pk0025.g5 wl1n Triticum aestivu... 48 0.002
gb|CA642649.1|CA642649 wre1n.pk0060.f8 wre1n Triticum aesti... 48 0.002
gb|CA646040.1|CA646040 wre1n.pk0105.e3 wre1n Triticum aesti... 48 0.002
gb|CA682391.1|CA682391 wlm24.pk0027.g10 wlm24 Triticum aest... 48 0.002
gb|CA697934.1|CA697934 wlk4.pk0020.e11 wlk4 Triticum aestiv... 48 0.002
gb|CA704150.1|CA704150 wdk1c.pk012.g13 wdk1c Triticum aesti... 48 0.002
gb|CA706945.1|CA706945 wdk2c.pk0004.c2 wdk2c Triticum aesti... 48 0.002
gb|CD373575.1|CD373575 WHE0425_A06_A11ZT CS wheat etiolated... 48 0.002
gb|CD491286.1|CD491286 WHE3083_B08_C15ZT CS wheat cold-stre... 48 0.002
gb|CD865586.1|CD865586 AZO2.101E11F010208 AZO2 Triticum aes... 48 0.002
gb|CD865587.1|CD865587 AZO2.101E11R010329 AZO2 Triticum aes... 48 0.002
gb|CD879772.1|CD879772 AZO4.106F02R011122 AZO4 Triticum aes... 48 0.002
gb|CD879974.1|CD879974 AZO4.106O19R011122 AZO4 Triticum aes... 48 0.002
gb|CD889959.1|CD889959 G118.113I11F010716 G118 Triticum aes... 48 0.002
gb|CK197037.1|CK197037 FGAS005508 Triticum aestivum FGAS: L... 48 0.002
gb|CK211475.1|CK211475 FGAS023320 Triticum aestivum FGAS: L... 48 0.002
gb|CN011997.1|CN011997 WHE3891_D05_G09ZS Wheat Fusarium gra... 48 0.002
gb|CV770415.1|CV770415 FGAS064808 Triticum aestivum FGAS: L... 48 0.002
gb|BG904266.1|BG904266 TaLr1130G04R TaLr1 Triticum aestivum... 44 0.026
gb|CA701949.1|CA701949 wkm2c.pk006.n15 wkm2c Triticum aesti... 44 0.026
gb|CA741179.1|CA741179 wem1c.pk001.b24 wem1c Triticum aesti... 44 0.026
gb|CD926736.1|CD926736 GR45.001O17F001016 GR45 Triticum aes... 44 0.026
gb|CK200875.1|CK200875 FGAS009392 Triticum aestivum FGAS: L... 44 0.026
gb|CK208025.1|CK208025 FGAS019702 Triticum aestivum FGAS: L... 44 0.026
gb|CK209627.1|CK209627 FGAS021399 Triticum aestivum FGAS: L... 44 0.026
gb|CN011332.1|CN011332 WHE3882_H04_P08ZS Wheat Fusarium gra... 44 0.026
gb|CV760947.1|CV760947 FGAS055334 Triticum aestivum FGAS: L... 44 0.026
gb|BF473937.1|BF473937 WHE0837_A08_A15ZS Wheat vernalized c... 42 0.10
gb|CD491688.1|CD491688 WHE2854_C04_F08ZT CS wheat unstresse... 42 0.10
gb|CA497644.1|CA497644 WHE3230_E04_I08ZT Wheat meiotic anth... 40 0.40
gb|CA626942.1|CA626942 wl1n.pk0145.e3 wl1n Triticum aestivu... 40 0.40
gb|CV778423.1|CV778423 FGAS072831 Triticum aestivum FGAS: L... 40 0.40
>gb|CA621430.1|CA621430 wl1n.pk0065.c8 wl1n Triticum aestivum cDNA clone wl1n.pk0065.c8 5'
end, mRNA sequence
Length = 502
Score = 739 bits (373), Expect = 0.0
Identities = 481/503 (95%), Gaps = 14/503 (2%)
Strand = Plus / Minus
Query: 53 taatctgtatcattcattgttcattcatcatacaattgcaggggctcgtaaataattcgg 112
||||||||||||||||||||||||| ||| ||||||||||||| |||| |||||||
Sbjct: 489 taatctgtatcattcattgttcatt-atc-tacaattgcagggnt--gtaa-taattcgn 435
Query: 113 cacaaaaggtatgcgccctgcccaaagggggcaggcaggaacggaaaagtgtgcaggaac 172
||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 434 -acaaa--gtatgcgccttgcccaaaaggggcaggcaggaacggaaaagtgtgcagga-c 379
Query: 173 tatgtgtgaaatcaaagaatattgctgcaacctactcccaacggtctcttgcttctttgt 232
|||||||||| ||||||| ||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 378 tatgtgtgaa-tcaaaga-tattgttgcaac-tactcccaacggtctcttgcttctttgt 322
Query: 233 gttgcgcgtactggtactgatgacttgtggggaggagttggagatcagaagtcgtagatg 292
|||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttgcgcgtactggtantgatga-ttgtggggaggagttggagatcagaagtcgtagatg 263
Query: 293 agcttccggaacttctccatgtgctccgcctgcagcgagatggccacggacaggctgccg 352
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 agcttccggaa-ttctccatgtgctccgcctgcagcgagatggccacggacaggctgccg 204
Query: 353 tcgcggttggcgctggggagcacgaacgcgagcccctcgtaggcgatgccgccggggccc 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tcgcggttggcgctggggagcacgaacgcgagcccctcgtaggcgatgccgccggggccc 144
Query: 413 atgaacacgggccgcccccacccgaagtccgcgtcgtggatgggcaggcgcacccagctg 472
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 143 atgaacacgggccgcccccacccgnagtccgcgtcgtggatgggcaggcgcacccagctg 84
Query: 473 gtgagccccaggttggggcaccggaacgtgtgcgccccgcggaccagcgccgacaggtcc 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 gtgagccccaggttggggcaccggaacgtgtgcgccccgcggaccagcgccgacaggtcc 24
Query: 533 ggctgcagctccaggtagtccag 555
|||||||||||||||||||||||
Sbjct: 23 ggctgcagctccaggtagtccag 1
>gb|BQ837961.1|BQ837961 WHE2905_A03_A05ZS Wheat aluminum-stressed root tip cDNA library
Triticum aestivum cDNA clone WHE2905_A03_A05, mRNA
sequence
Length = 644
Score = 617 bits (311), Expect = e-175
Identities = 498/559 (89%), Gaps = 1/559 (0%)
Strand = Plus / Minus
Query: 275 gatcagaagtcgtagatgagcttccggaacttctccatgtgctccgcctgcagcgagatg 334
||||||||||| |||| | |||||||||||||||||| ||||| |||||||||||||||
Sbjct: 567 gatcagaagtcaaagatcatcttccggaacttctccatatgctcggcctgcagcgagatg 508
Query: 335 gccacggacaggctgccgtcgcggttggcgctggggagcacgaacgcgagcccctcgtag 394
||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 507 gccaccgacaggctgccgtcgcggctggcgctggggagcacgaatgcgagcccctcgtac 448
Query: 395 gcgatgccgccggggcccatgaacacgggccgcccccacccgaagtccgcgtcgtggatg 454
||||||||||||||||||||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 447 gcgatgccgccggggcccatgaagacgggccggccccagccgaagtcggcatcgtggatg 388
Query: 455 ggcaggcgcacccagctggtgagccccaggttggggcaccggaacgtgtgcgccccgcgg 514
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 387 ggcaggcgcacccagctggtgagcccgaggttggggcaccggaacgtgtgcgcgccgcgg 328
Query: 515 accagcgccgacaggtccggctgcagctccaggtagtccagcgctgaccggcagtacccg 574
||||||||||||||||||||||||| |||||||||||||||||| || ||||||||| ||
Sbjct: 327 accagcgccgacaggtccggctgcatctccaggtagtccagcgccgagcggcagtactcg 268
Query: 575 tcgtccatccggtccaacgcggcctggatcacggacgcgccctctgccaccccggccgtc 634
| |||||| |||| ||| ||||||||| || |||||| || |||| | | | |||
Sbjct: 267 ttgtccataacctccagcgccgcctggatcgtggtcgcgccgtccgccagcgagccggtc 208
Query: 635 accgtgccggcgttggccagcggcgtcgccgtgaaagatcacgttgccgaagtagccctc 694
||| |||| || || |||||||| |||||| ||||| ||||||||||||||||||||
Sbjct: 207 accttgcccgccaccgcgagcggcgtggccgtg-aagatgacgttgccgaagtagccctc 149
Query: 695 cggaagcggcggctgcagccgctgccgcccgtccgtggcgcagtacagcttggtgggctg 754
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 cgggagcggcggctgcagccgctgccgcccgtccgtggcgcagtacagcttggtgggctg 89
Query: 755 gtcggccggcaggccgcgcgccagggacgcgcaccgccacacgtgcgccgccagcacagc 814
|| | | |||||| || |||||||||||||||||||| ||||||||| | ||||| ||
Sbjct: 88 ctctggggacaggccacgggccagggacgcgcaccgccagacgtgcgccccgagcaccgc 29
Query: 815 gtacgtgctgaaccgcggc 833
||| |||||||||||||||
Sbjct: 28 gtaggtgctgaaccgcggc 10
>gb|CA625239.1|CA625239 wl1n.pk0129.d3 wl1n Triticum aestivum cDNA clone wl1n.pk0129.d3 5'
end, mRNA sequence
Length = 318
Score = 601 bits (303), Expect = e-170
Identities = 317/319 (99%), Gaps = 2/319 (0%)
Strand = Plus / Minus
Query: 447 cgtggatgggcaggcgcacccagctggtgagccccaggttggggcaccggaacgtgtgcg 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 cgtggatgggcaggcgcacccagctggtgagccccaggttggggcaccggaacgtgtgcg 259
Query: 507 cccc-gcggaccagcgccgacaggtccggctgcagctccaggtagtccagcgctgaccgg 565
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cccccgcggaccagcgccgacaggtccggctgcagctccaggtagtccagcgctgaccgg 199
Query: 566 cagtacccgtcgtccatccggtccaacgcggcctggatcacggacgcgccctctgccacc 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 cagtacccgtcgtccatccggtccaacgcggcctggatcacggacgcgccctctgccacc 139
Query: 626 ccggccgtcaccgtgccggcgttggccagcggcgtcgccgtgaaagatcacgttgccgaa 685
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 138 ccggccgtcaccgtgccggcgttggccagcggcgtcgccgtg-aagatcacgttgccgaa 80
Query: 686 gtagccctccggaagcggcggctgcagccgctgccgcccgtccgtggcgcagtacagctt 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 gtagccctccggaagcggcggctgcagccgctgccgcccgtccgtggcgcagtacagctt 20
Query: 746 ggtgggctggtcggccggc 764
|||||||||||||||||||
Sbjct: 19 ggtgggctggtcggccggc 1
>gb|BQ806052.1|BQ806052 WHE3574_C01_F02ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3574_C01_F02, mRNA sequence
Length = 630
Score = 571 bits (288), Expect = e-161
Identities = 517/592 (87%), Gaps = 1/592 (0%)
Strand = Plus / Minus
Query: 350 ccgtcgcggttggcgctggggagcacgaacgcgagcccctcgtaggcgatgccgccgggg 409
||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 630 ccgtcgcggctggcgctggggagcacgaacgcgagcccctcgtacgcgatgccgccgggg 571
Query: 410 cccatgaacacgggccgcccccacccgaagtccgcgtcgtggatgggcaggcgcacccag 469
||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 570 cccatgaacacgggccggccccagccgaagtcggcgtcgtggatgggcaggcgcacccag 511
Query: 470 ctggtgagccccaggttggggcaccggaacgtgtgcgccccgcggaccagcgccgacagg 529
||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 510 ctggtgagcccaaggttggggcaccggaacgtgtgcgcgccacggaccagcgccgacagg 451
Query: 530 tccggctgcagctccaggtagtccagcgctgaccggcagtacccgtcgtccatccggtcc 589
|||||||||| |||||||||||||||||| || ||||||||| ||| ||||||| |||
Sbjct: 450 tccggctgcatctccaggtagtccagcgccgagcggcagtactcgttgtccatcacctcc 391
Query: 590 aacgcggcctggatcacggacgcgccctctgccaccccggccgtcaccgtgccggcgttg 649
| ||| ||||||||| || |||||| || |||| | | | |||||| |||| ||
Sbjct: 390 agcgccgcctggatcgtggtcgcgccgtccgccagcgagccggtcaccttgcccgccacc 331
Query: 650 gccagcggcgtcgccgtgaaagatcacgttgccgaagtagccctccggaagcggcggctg 709
|| |||||||| |||||| ||||| ||||||||||||||||||||||| ||| |||||||
Sbjct: 330 gcgagcggcgtggccgtg-aagatgacgttgccgaagtagccctccgggagcagcggctg 272
Query: 710 cagccgctgccgcccgtccgtggcgcagtacagcttggtgggctggtcggccggcaggcc 769
|||||||||||||||||||||||||||||||| ||| |||||||| || | | ||||||
Sbjct: 271 cagccgctgccgcccgtccgtggcgcagtacaacttcgtgggctgctctggggacaggcc 212
Query: 770 gcgcgccagggacgcgcaccgccacacgtgcgccgccagcacagcgtacgtgctgaaccg 829
|| |||||||||||||||||||| ||||| || | ||||| ||||| |||||||||||
Sbjct: 211 acgggccagggacgcgcaccgccagacgtgtgcaccgagcaccgcgtaggtgctgaaccg 152
Query: 830 cggcgcgccctcgcgcgcggggacctgcgaacggaggcggacgagctcggcgcgggagag 889
|||||||||||||| | ||| | ||| | ||||||||| |||| ||||||||||| ||
Sbjct: 151 cggcgcgccctcgcctgtgggaagctgggcgcggaggcggccgaggtcggcgcgggacag 92
Query: 890 cttgaagatagccacggctgtgggcggcgtcgccggcttggacgtgagggcc 941
||||||||| ||||||| |||||||||| ||||||||| |||||||||
Sbjct: 91 cttgaagatgtccacggccgtgggcggcgcttccggcttggcggtgagggcc 40
>gb|CA617928.1|CA617928 wl1n.pk0026.d12 wl1n Triticum aestivum cDNA clone wl1n.pk0026.d12
5' end, mRNA sequence
Length = 317
Score = 504 bits (254), Expect = e-141
Identities = 269/273 (98%), Gaps = 1/273 (0%)
Strand = Plus / Minus
Query: 622 caccccggccgtcaccgtgccggcgttggccagcggcgtcgccgtgaaagatcacgttgc 681
|||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 272 caccccggccgtcaccgtgccggcgttgnccagcggcgtcgccgtgaa-gatcacgttgc 214
Query: 682 cgaagtagccctccggaagcggcggctgcagccgctgccgcccgtccgtggcgcagtaca 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 cgaagtagccctccggaagcggcggctgcagccgctgccgcccgtccgtggcgcagtaca 154
Query: 742 gcttggtgggctggtcggccggcaggccgcgcgccagggacgcgcaccgccacacgtgcg 801
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 153 gcttggtgggctggtcggccggcaagccgggcgccagggacgcgcaccgccacacgtgcg 94
Query: 802 ccgccagcacagcgtacgtgctgaaccgcggcgcgccctcgcgcgcggggacctgcgaac 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 ccgccagcacagcgtacgtgctgaaccgcggcgcgccctcgcgcgcggggacctgcgaac 34
Query: 862 ggaggcggacgagctcggcgcgggagagcttga 894
|||||||||||||||||||||||||||||||||
Sbjct: 33 ggaggcggacgagctcggcgcgggagagcttga 1
>gb|CD928159.1|CD928159 GR45.104C12R010608 GR45 Triticum aestivum cDNA clone GR45104C12,
mRNA sequence
Length = 635
Score = 468 bits (236), Expect = e-130
Identities = 375/420 (89%), Gaps = 1/420 (0%)
Strand = Plus / Plus
Query: 275 gatcagaagtcgtagatgagcttccggaacttctccatgtgctccgcctgcagcgagatg 334
||||||||||| |||| | |||||||||||||||||| ||||| |||||||||||||||
Sbjct: 216 gatcagaagtcaaagatcatcttccggaacttctccatatgctcggcctgcagcgagatg 275
Query: 335 gccacggacaggctgccgtcgcggttggcgctggggagcacgaacgcgagcccctcgtag 394
||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 276 gccaccgacaggctgccgtcgcggctggcgctggggagcacgaacgcgagcccctcgtac 335
Query: 395 gcgatgccgccggggcccatgaacacgggccgcccccacccgaagtccgcgtcgtggatg 454
|||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 336 gcgatgccgccggggcccatgaacacgggccggccccagccgaagtcggcgtcgtggatg 395
Query: 455 ggcaggcgcacccagctggtgagccccaggttggggcaccggaacgtgtgcgccccgcgg 514
|||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 396 ggcaggcgcacccagctggtgagcccaaggttggggcaccggaacgtgtgcgcgccacgg 455
Query: 515 accagcgccgacaggtccggctgcagctccaggtagtccagcgctgaccggcagtacccg 574
||||||||||||||||||||||||| |||||||||||||||||| || ||||||||| ||
Sbjct: 456 accagcgccgacaggtccggctgcatctccaggtagtccagcgccgagcggcagtactcg 515
Query: 575 tcgtccatccggtccaacgcggcctggatcacggacgcgccctctgccaccccggccgtc 634
| ||||||| |||| ||| ||||||||| || |||||| || |||| | | | |||
Sbjct: 516 ttgtccatcacctccagcgccgcctggatcgtggtcgcgccgtccgccagcgagccggtc 575
Query: 635 accgtgccggcgttggccagcggcgtcgccgtgaaagatcacgttgccgaagtagccctc 694
||| |||| || || |||||||| |||||| ||||| ||||||||||||||||||||
Sbjct: 576 accttgcccgccaccgcgagcggcgtggccgtg-aagatgacgttgccgaagtagccctc 634
Score = 56.0 bits (28), Expect = 7e-006
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 162 tgtgcaggaactatgtgtgaaatcaaagaat-attgctgcaacctact 208
||||||||||||| ||||| ||||||||||| ||||||||| ||||||
Sbjct: 114 tgtgcaggaactacgtgtgtaatcaaagaatcattgctgcatcctact 161
>gb|BQ744105.1|BQ744105 WHE4111_G08_N15ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4111_G08_N15, mRNA sequence
Length = 573
Score = 446 bits (225), Expect = e-123
Identities = 279/297 (93%)
Strand = Plus / Minus
Query: 275 gatcagaagtcgtagatgagcttccggaacttctccatgtgctccgcctgcagcgagatg 334
||||||||||| |||| | |||||||||||||||||| ||||| |||||||||||||||
Sbjct: 315 gatcagaagtcaaagatcatcttccggaacttctccatatgctcggcctgcagcgagatg 256
Query: 335 gccacggacaggctgccgtcgcggttggcgctggggagcacgaacgcgagcccctcgtag 394
||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 255 gccaccgacaggctgccgtcgcggctggcgctggggagcacgaacgcgagcccctcgtac 196
Query: 395 gcgatgccgccggggcccatgaacacgggccgcccccacccgaagtccgcgtcgtggatg 454
|||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 195 gcgatgccgccggggcccatgaacacgggccggccccagccgaagtcggcgtcgtggatg 136
Query: 455 ggcaggcgcacccagctggtgagccccaggttggggcaccggaacgtgtgcgccccgcgg 514
|||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 135 ggcaggcgcacccagctggtgagcccaaggttggggcaccggaacgtgtgcgcgccacgg 76
Query: 515 accagcgccgacaggtccggctgcagctccaggtagtccagcgctgaccggcagtac 571
||||||||||||||||||||||||| |||||||||||||||||| || |||||||||
Sbjct: 75 accagcgccgacaggtccggctgcatctccaggtagtccagcgccgagcggcagtac 19
Score = 56.0 bits (28), Expect = 7e-006
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 162 tgtgcaggaactatgtgtgaaatcaaagaat-attgctgcaacctact 208
||||||||||||| ||||| ||||||||||| ||||||||| ||||||
Sbjct: 417 tgtgcaggaactacgtgtgtaatcaaagaatcattgctgcatcctact 370
>gb|CD937391.1|CD937391 OV.106O01R010430 OV Triticum aestivum cDNA clone OV106O01, mRNA
sequence
Length = 595
Score = 428 bits (216), Expect = e-118
Identities = 270/288 (93%)
Strand = Plus / Plus
Query: 295 cttccggaacttctccatgtgctccgcctgcagcgagatggccacggacaggctgccgtc 354
|||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 243 cttccggaacttctccatatgctcggcctgcagcgagatggccaccgacaggctgccgtc 302
Query: 355 gcggttggcgctggggagcacgaacgcgagcccctcgtaggcgatgccgccggggcccat 414
|||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 303 gcggctggcgctggggagcacgaatgcgagcccctcgtacgcgatgccgccggggcccat 362
Query: 415 gaacacgggccgcccccacccgaagtccgcgtcgtggatgggcaggcgcacccagctggt 474
||| |||||||| ||||| |||||||| || |||||||||||||||||||||||||||||
Sbjct: 363 gaagacgggccggccccagccgaagtcggcatcgtggatgggcaggcgcacccagctggt 422
Query: 475 gagccccaggttggggcaccggaacgtgtgcgccccgcggaccagcgccgacaggtccgg 534
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 423 gagcccgaggttggggcaccggaacgtgtgcgcgccgcggaccagcgccgacaggtccgg 482
Query: 535 ctgcagctccaggtagtccagcgctgaccggcagtacccgtcgtccat 582
||||| |||||||||||||||||| || ||||||||| ||| ||||||
Sbjct: 483 ctgcatctccaggtagtccagcgccgagcggcagtactcgttgtccat 530
Score = 46.1 bits (23), Expect = 0.007
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 162 tgtgcaggaactatgtgtgaaatcaaagaat 192
||||||||||||| ||||| |||||||||||
Sbjct: 124 tgtgcaggaactacgtgtgtaatcaaagaat 154
>gb|CK193498.1|CK193498 FGAS001912 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 832
Score = 420 bits (212), Expect = e-115
Identities = 284/308 (92%)
Strand = Plus / Minus
Query: 275 gatcagaagtcgtagatgagcttccggaacttctccatgtgctccgcctgcagcgagatg 334
||||||||||| |||| | |||||||||||||||||| ||||| |||||||||||| |
Sbjct: 508 gatcagaagtcaaagatcatcttccggaacttctccatatgctcggcctgcagcgaggag 449
Query: 335 gccacggacaggctgccgtcgcggttggcgctggggagcacgaacgcgagcccctcgtag 394
||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 448 gccaccgacaggctgccgtcgcggctggcgctggggagcacgaatgcgagcccctcgtac 389
Query: 395 gcgatgccgccggggcccatgaacacgggccgcccccacccgaagtccgcgtcgtggatg 454
||||||||||||||||||||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 388 gcgatgccgccggggcccatgaagacgggccggccccagccgaagtcggcatcgtggatg 329
Query: 455 ggcaggcgcacccagctggtgagccccaggttggggcaccggaacgtgtgcgccccgcgg 514
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 328 ggcaggcgcacccagctggtgagcccgaggttggggcaccggaacgtgtgcgcgccgcgg 269
Query: 515 accagcgccgacaggtccggctgcagctccaggtagtccagcgctgaccggcagtacccg 574
||||||||||||||||||||||||| |||||||||||||||||| || ||||||||| ||
Sbjct: 268 accagcgccgacaggtccggctgcatctccaggtagtccagcgccgagcggcagtactcg 209
Query: 575 tcgtccat 582
| ||||||
Sbjct: 208 ttgtccat 201
Score = 46.1 bits (23), Expect = 0.007
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 162 tgtgcaggaactatgtgtgaaatcaaagaat 192
||||||||||||| ||||| |||||||||||
Sbjct: 607 tgtgcaggaactacgtgtgtaatcaaagaat 577
>gb|CK193153.1|CK193153 FGAS001567 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 842
Score = 414 bits (209), Expect = e-114
Identities = 283/308 (91%)
Strand = Plus / Plus
Query: 275 gatcagaagtcgtagatgagcttccggaacttctccatgtgctccgcctgcagcgagatg 334
||||||||||| |||| | |||||||||||||||||| ||||| |||||||||||||||
Sbjct: 392 gatcagaagtcaaagatcatcttccggaacttctccatatgctcggcctgcagcgagatg 451
Query: 335 gccacggacaggctgccgtcgcggttggcgctggggagcacgaacgcgagcccctcgtag 394
||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 452 gccaccgacaggctgccgtcgcggctggcgctggggagcacgaatgcgagcccctcgtac 511
Query: 395 gcgatgccgccggggcccatgaacacgggccgcccccacccgaagtccgcgtcgtggatg 454
||||||||||||||||||||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 512 gcgatgccgccggggcccatgaagacgggccggccccagccgaagtcggcatcgtggatg 571
Query: 455 ggcaggcgcacccagctggtgagccccaggttggggcaccggaacgtgtgcgccccgcgg 514
|||||||||||||||||||||||||| |||||||||| ||| || |||||||| ||||||
Sbjct: 572 ggcaggcgcacccagctggtgagcccgaggttggggccccgaaatgtgtgcgcnccgcgg 631
Query: 515 accagcgccgacaggtccggctgcagctccaggtagtccagcgctgaccggcagtacccg 574
||||||||||||||||||||||||| |||||||||||||||||| || ||||||||| ||
Sbjct: 632 accagcgccgacaggtccggctgcatctccaggtagtccagcgccgagcggcagtactcg 691
Query: 575 tcgtccat 582
| ||||||
Sbjct: 692 ttgtccat 699
Score = 46.1 bits (23), Expect = 0.007
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 162 tgtgcaggaactatgtgtgaaatcaaagaat 192
||||||||||||| ||||| |||||||||||
Sbjct: 293 tgtgcaggaactacgtgtgtaatcaaagaat 323
>gb|CV763616.1|CV763616 FGAS057999 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 832
Score = 392 bits (198), Expect = e-107
Identities = 413/482 (85%), Gaps = 2/482 (0%)
Strand = Plus / Minus
Query: 460 gcgcacccagctggtgagccccaggttggggcaccggaacgtgtgcgccccgcggaccag 519
||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||
Sbjct: 832 gcgcacccagctggtgagcccgaggt-ggggcaccggaacgtgtgcgcgccgcggaccag 774
Query: 520 cgccgacaggtccggctgcagctccaggtagtccagcgctgaccggcagtacccgtcgtc 579
||||||||| | ||||||| |||||||||||||||||| || ||||||||| ||| |||
Sbjct: 773 cgccgacagtccgggctgcatctccaggtagtccagcgccgagcggcagtactcgttgtc 714
Query: 580 catccggtccaacgcggcctggatcacggacgcgccctctgccaccccggccgtcaccgt 639
||| |||| ||| ||||||||| || |||||| || |||| | | | |||||| |
Sbjct: 713 cataacctccagcgccgcctggatcgtggtcgcgccgtccgccagcgagccggtcacctt 654
Query: 640 gccggcgttggccagcggcgtcgccgtgaaagatcacgttgccgaagtagccctccggaa 699
||| || || |||||||| |||||||| ||| ||||||||||||||||||||||| |
Sbjct: 653 gcccgccaccgcgagcggcgtggccgtgaa-gatgacgttgccgaagtagccctccggga 595
Query: 700 gcggcggctgcagccgctgccgcccgtccgtggcgcagtacagcttggtgggctggtcgg 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 594 gcggcggctgcagccgctgccgcccgtccgtggcgcagtacagcttggtgggctgctctg 535
Query: 760 ccggcaggccgcgcgccagggacgcgcaccgccacacgtgcgccgccagcacagcgtacg 819
| |||||| || |||||||||||||||||||| ||||||||| | ||||| ||||| |
Sbjct: 534 gggacaggccacgggccagggacgcgcaccgccagacgtgcgccccgagcaccgcgtagg 475
Query: 820 tgctgaaccgcggcgcgccctcgcgcgcggggacctgcgaacggaggcggacgagctcgg 879
|||||||||||||||||||||||| | ||||| ||| | ||||||||| |||| ||||
Sbjct: 474 tgctgaaccgcggcgcgccctcgccagtggggagctgggcgcggaggcggccgaggtcgg 415
Query: 880 cgcgggagagcttgaagatagccacggctgtgggcggcgtcgccggcttggacgtgaggg 939
||||||| ||||||||||| ||||||| |||||| ||| ||||||||| |||||||
Sbjct: 414 cgcgggaaagcttgaagatgtccacggccgtgggccgcgcttccggcttggcggtgaggg 355
Query: 940 cc 941
||
Sbjct: 354 cc 353
Score = 190 bits (96), Expect = 2e-046
Identities = 156/176 (88%)
Strand = Plus / Minus
Query: 960 agcatggcgggcgccggctggtactcgatgtgcgggtagcccggggtcggcggatcgcgc 1019
|||||||||||||| |||||||||||||||||||| | | ||| |||||||| |||||
Sbjct: 334 agcatggcgggcgctggctggtactcgatgtgcggatgggacggcgtcggcgggtcgcgt 275
Query: 1020 gcgcggaggagcgaccggtcaatgaagggcatgccggcgatcgggacgccgcggcagagg 1079
||||||||||| | ||||||||||| |||||| |||| ||||| |||||||||||||||
Sbjct: 274 gcgcggaggagggtgcggtcaatgaacggcatgacggcaatcggcacgccgcggcagagg 215
Query: 1080 tccgcccacgagttgatgaagtgcagtccggagaagccgccggccacgtggtgctg 1135
|| ||||| ||||||||||||||||| |||||||||||| |||| |||||||||||
Sbjct: 214 tcggcccatgagttgatgaagtgcaggccggagaagccgtcggcgacgtggtgctg 159
Score = 40.1 bits (20), Expect = 0.40
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1165 cacttgaagtgggtcacctg 1184
||||||||||||||||||||
Sbjct: 130 cacttgaagtgggtcacctg 111
>gb|CD882469.1|CD882469 F1.106O03R010628 F1 Triticum aestivum cDNA clone F1106O03, mRNA
sequence
Length = 486
Score = 361 bits (182), Expect = 9e-098
Identities = 230/246 (93%)
Strand = Plus / Plus
Query: 275 gatcagaagtcgtagatgagcttccggaacttctccatgtgctccgcctgcagcgagatg 334
||||||||||| |||| | |||||||||||||||||| ||||| |||||||||||||||
Sbjct: 241 gatcagaagtcaaagatcatcttccggaacttctccatatgctcggcctgcagcgagatg 300
Query: 335 gccacggacaggctgccgtcgcggttggcgctggggagcacgaacgcgagcccctcgtag 394
||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 301 gccaccgacaggctgccgtcgcggctggcgctggggagcacgaacgcgagcccctcgtac 360
Query: 395 gcgatgccgccggggcccatgaacacgggccgcccccacccgaagtccgcgtcgtggatg 454
|||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 361 gcgatgccgccggggcccatgaacacgggccggccccagccgaagtcggcgtcgtggatg 420
Query: 455 ggcaggcgcacccagctggtgagccccaggttggggcaccggaacgtgtgcgccccgcgg 514
|||||||||||||||||||||||||| |||| ||||||||||||||||||||| || |||
Sbjct: 421 ggcaggcgcacccagctggtgagcccaaggtgggggcaccggaacgtgtgcgcgccacgg 480
Query: 515 accagc 520
||||||
Sbjct: 481 accagc 486
Score = 48.1 bits (24), Expect = 0.002
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 162 tgtgcaggaactatgtgtgaaatcaaagaat-attgctgcaacctact 208
||||||||||||| ||||| ||||||||||| || |||||| ||||||
Sbjct: 139 tgtgcaggaactacgtgtgtaatcaaagaatcatggctgcatcctact 186
>gb|CV782592.1|CV782592 FGAS077005 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 857
Score = 357 bits (180), Expect = 1e-096
Identities = 517/616 (83%), Gaps = 15/616 (2%)
Strand = Plus / Minus
Query: 426 gcccccacccgaa-gtccgcgtcgt-ggatggg-caggcgcaccc-agctggtgagcccc 481
||||||||||||| ||| ||||||| ||||||| ||||||||||| ||||||||||||||
Sbjct: 727 gcccccacccgaaagtcggcgtcgttggatggggcaggcgcaccccagctggtgagcccc 668
Query: 482 a-ggttggggcaccggaacgt-gtgcgc-cccgcggaccagcgccgacaggtccgg-ctg 537
| ||||||||||||||||||| |||||| ||| ||||||||||||||| |||||| |||
Sbjct: 667 aaggttggggcaccggaacgttgtgcgcgcccagggaccagcgccgacaagtccgggctg 608
Query: 538 cagctccaggtagtccagcgctgaccggcagtacccgtcgtccatccggtccaacgcggc 597
|| |||||||||||||||||| || ||||||||| ||| ||||||| |||| ||| ||
Sbjct: 607 catctccaggtagtccagcgccgagcggcagtactcgttgtccatcacctccagcgccgc 548
Query: 598 ctggatcacggacgcgccctctgccaccccggccgtcaccgtgccggcgttggccagcgg 657
||||||| || |||||| || |||| | | | |||||| |||| || || |||||
Sbjct: 547 ctggatcgtggtcgcgccgtccgccagcgagccggtcaccttgcccgccaccgcgagcgg 488
Query: 658 cgtcgccgtgaaagatcacgttgccgaagtagccctccggaagcggcggctgcagccgct 717
||| |||||||| ||| ||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 487 cgtggccgtgaa-gatgacgttgccgaagtagccctccgggagcagcggctgcagccgct 429
Query: 718 gccgcccgtccgtggcgcagtacagcttggtgggctggtcggccggcaggccgcgcgcca 777
|||||||||||||||||||||||| ||| |||||||| || | | |||||| || ||||
Sbjct: 428 gccgcccgtccgtggcgcagtacaacttcgtgggctgctctggggacaggccacgggcca 369
Query: 778 gggacgcgcaccgccacacgtgcgccgccagcacagcgtacgtgctgaaccgcggcgcgc 837
|||||||||||||||| ||||| || | ||||| ||||| |||||||||||||||||||
Sbjct: 368 gggacgcgcaccgccagacgtgtgcaccgagcaccgcgtaggtgctgaaccgcggcgcgc 309
Query: 838 cctcgcgcgcggggacctgcgaacggaggcggacgagctcggcgcgggagagcttgaaga 897
|||||| | ||| | ||| | ||||||||| |||| ||||||||||| ||||||||||
Sbjct: 308 cctcgcctgtgggaagctgggcgcggaggcggccgaggtcggcgcgggacagcttgaaga 249
Query: 898 tagccacggctgtgggcggcgtcgccggcttggacgtgagggccgcctgtggcggctcag 957
| ||||||| |||||||||| ||||||||| ||||||| |||| ||| ||| |
Sbjct: 248 tgtccacggccgtgggcggcgcttccggcttggcggtgaggg---cctgcggctcctccg 192
Query: 958 at---agcatggcgggcgccggctggtactcgatgtgcgggtagcccggggtcggcggat 1014
| |||||||||||||| ||||||| |||||||||||||| | ||||||||||| |
Sbjct: 191 agtccagcatggcgggcgctggctggtcctcgatgtgcgggtgggaaggggtcggcgggt 132
Query: 1015 cgcgcgcgcggaggag 1030
| || |||||||||||
Sbjct: 131 cacgtgcgcggaggag 116
>gb|AJ614336.1|AJ614336 AJ614336 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 10068R, mRNA
sequence
Length = 352
Score = 325 bits (164), Expect = 5e-087
Identities = 296/338 (87%), Gaps = 2/338 (0%)
Strand = Plus / Minus
Query: 411 ccatgaacacgggccgcccccacccgaagtccgcgtcgtggatgggcaggcgcacccagc 470
|||| || |||||||| | ||| |||||||| || |||||||||||||||||||||||||
Sbjct: 352 ccatnaagacgggccggcnccagccgaagtcggcatcgtggatgggcaggcgcacccagc 293
Query: 471 tggtgagccccaggttggggcaccggaac-gtgtgcgccccgcggaccagcgccgacagg 529
|||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 292 tggtgagcccgaggttggggcaccggaactgtgtgcgcgccgcggaccagcgccgacagg 233
Query: 530 tccggctgcagctccaggtagtccagcgctgaccggcagtacccgtcgtccatccggtcc 589
|||||||||| |||||||||||||||||| || ||||||||| ||| |||||| |||
Sbjct: 232 tccggctgcatctccaggtagtccagcgccgagcggcagtactcgttgtccataacctcc 173
Query: 590 aacgcggcctggatcacggacgcgccctctgccaccccggccgtcaccgtgccggcgttg 649
| ||| ||||||||| || |||||| || |||| | | | |||||| |||| ||
Sbjct: 172 agcgccgcctggatcgtggtcgcgccgtccgccagcgagccggtcaccttgcccgccacc 113
Query: 650 gccagcggcgtcgccgtgaaagatcacgttgccgaagtagccctccggaagcggcggctg 709
|| |||||||| |||||| ||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 112 gcgagcggcgtggccgtg-aagatgacgttgccgaagtagccctccgggagcggcggctg 54
Query: 710 cagccgctgccgcccgtccgtggcgcagtacagcttgg 747
||||||||||||||||||||||||||||||||||||||
Sbjct: 53 cagccgctgccgcccgtccgtggcgcagtacagcttgg 16
>gb|BE415761.1|BE415761 MWL037.B06000418 ITEC MWL Wheat Root Library Triticum aestivum cDNA
clone MWL037.B06, mRNA sequence
Length = 298
Score = 317 bits (160), Expect = 1e-084
Identities = 215/234 (91%)
Strand = Plus / Minus
Query: 371 agcacgaacgcgagcccctcgtaggcgatgccgccggggcccatgaacacgggccgcccc 430
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 298 agcacgaacgcgagcccctcgtacgcgatgccgccggggcccatgaacacgggccggccc 239
Query: 431 cacccgaagtccgcgtcgtggatgggcaggcgcacccagctggtgagccccaggttgggg 490
|| || ||||| |||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 238 cagccnaagtcggcgtcgtgnatgggcaggcgcacccagctggtgagcccaaggttgggg 179
Query: 491 caccggaacgtgtgcgccccgcggaccagcgccgacaggtccggctgcagctccaggtag 550
||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||
Sbjct: 178 caccggaacgtgtgcgcgccacggaccagcgccgacaggtccggctgcatctccaggtag 119
Query: 551 tccagcgctgaccggcagtacccgtcgtccatccggtccaacgcggcctggatc 604
|||||||| || ||||||||| ||| ||||||| |||| ||| |||||||||
Sbjct: 118 tccagcgccgagcggcagtactcgttgtccatcacctccagcgccgcctggatc 65
>gb|BJ280998.1|BJ280998 BJ280998 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr20b03 5', mRNA sequence
Length = 509
Score = 274 bits (138), Expect = 2e-071
Identities = 243/278 (87%)
Strand = Plus / Minus
Query: 293 agcttccggaacttctccatgtgctccgcctgcagcgagatggccacggacaggctgccg 352
||||||| |||||||||||||||||| ||||||| |||||||| | |||||||||||||
Sbjct: 307 agcttcctgaacttctccatgtgctctgcctgcaatgagatggcgatggacaggctgccg 248
Query: 353 tcgcggttggcgctggggagcacgaacgcgagcccctcgtaggcgatgccgccggggccc 412
|| | | ||||| ||||| |||||||| || |||||||| ||||||||||| || |||
Sbjct: 247 tccttggtcgcgctcgggaggacgaacgccagtccctcgtacgcgatgccgccaggaccc 188
Query: 413 atgaacacgggccgcccccacccgaagtccgcgtcgtggatgggcaggcgcacccagctg 472
|||||||| ||||||||||| ||||| || ||||||||||| ||||||||||||||||||
Sbjct: 187 atgaacaccggccgcccccagccgaaatcggcgtcgtggatcggcaggcgcacccagctg 128
Query: 473 gtgagccccaggttggggcaccggaacgtgtgcgccccgcggaccagcgccgacaggtcc 532
||||| || ||||||||||||||||| |||||||| || ||||||| || |||||||||
Sbjct: 127 gtgaggccgaggttggggcaccggaaagtgtgcgctccacggaccaatgctgacaggtcc 68
Query: 533 ggctgcagctccaggtagtccagcgctgaccggcagta 570
||||||| ||||||||||||||| ||||| |||||||
Sbjct: 67 ggctgcatctccaggtagtccagggctgattggcagta 30
>gb|BJ281022.1|BJ281022 BJ281022 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr20d01 5', mRNA sequence
Length = 508
Score = 274 bits (138), Expect = 2e-071
Identities = 243/278 (87%)
Strand = Plus / Minus
Query: 293 agcttccggaacttctccatgtgctccgcctgcagcgagatggccacggacaggctgccg 352
||||||| |||||||||||||||||| ||||||| |||||||| | |||||||||||||
Sbjct: 307 agcttcctgaacttctccatgtgctctgcctgcaatgagatggcgatggacaggctgccg 248
Query: 353 tcgcggttggcgctggggagcacgaacgcgagcccctcgtaggcgatgccgccggggccc 412
|| | | ||||| ||||| |||||||| || |||||||| ||||||||||| || |||
Sbjct: 247 tccttggtcgcgctcgggaggacgaacgccagtccctcgtacgcgatgccgccaggaccc 188
Query: 413 atgaacacgggccgcccccacccgaagtccgcgtcgtggatgggcaggcgcacccagctg 472
|||||||| ||||||||||| ||||| || ||||||||||| ||||||||||||||||||
Sbjct: 187 atgaacaccggccgcccccagccgaaatcggcgtcgtggatcggcaggcgcacccagctg 128
Query: 473 gtgagccccaggttggggcaccggaacgtgtgcgccccgcggaccagcgccgacaggtcc 532
||||| || ||||||||||||||||| |||||||| || ||||||| || |||||||||
Sbjct: 127 gtgaggccgaggttggggcaccggaaagtgtgcgctccacggaccaatgctgacaggtcc 68
Query: 533 ggctgcagctccaggtagtccagcgctgaccggcagta 570
||||||| ||||||||||||||| ||||| |||||||
Sbjct: 67 ggctgcatctccaggtagtccagggctgattggcagta 30
>gb|BJ286059.1|BJ286059 BJ286059 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr19b03 3', mRNA sequence
Length = 477
Score = 274 bits (138), Expect = 2e-071
Identities = 243/278 (87%)
Strand = Plus / Plus
Query: 293 agcttccggaacttctccatgtgctccgcctgcagcgagatggccacggacaggctgccg 352
||||||| |||||||||||||||||| ||||||| |||||||| | |||||||||||||
Sbjct: 171 agcttcctgaacttctccatgtgctctgcctgcaatgagatggcgatggacaggctgccg 230
Query: 353 tcgcggttggcgctggggagcacgaacgcgagcccctcgtaggcgatgccgccggggccc 412
|| | | ||||| ||||| |||||||| || |||||||| ||||||||||| || |||
Sbjct: 231 tccttggtcgcgctcgggaggacgaacgccagtccctcgtacgcgatgccgccaggaccc 290
Query: 413 atgaacacgggccgcccccacccgaagtccgcgtcgtggatgggcaggcgcacccagctg 472
|||||||| ||||||||||| ||||| || ||||||||||| ||||||||||||||||||
Sbjct: 291 atgaacaccggccgcccccagccgaaatcggcgtcgtggatcggcaggcgcacccagctg 350
Query: 473 gtgagccccaggttggggcaccggaacgtgtgcgccccgcggaccagcgccgacaggtcc 532
||||| || ||||||||||||||||| |||||||| || ||||||| || |||||||||
Sbjct: 351 gtgaggccgaggttggggcaccggaaagtgtgcgctccacggaccaatgctgacaggtcc 410
Query: 533 ggctgcagctccaggtagtccagcgctgaccggcagta 570
||||||| ||||||||||||||| ||||| |||||||
Sbjct: 411 ggctgcatctccaggtagtccagggctgattggcagta 448
>gb|CK199443.1|CK199443 FGAS007942 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 860
Score = 274 bits (138), Expect = 2e-071
Identities = 243/278 (87%)
Strand = Plus / Plus
Query: 293 agcttccggaacttctccatgtgctccgcctgcagcgagatggccacggacaggctgccg 352
||||||| |||||||||||||||||| ||||||| |||||||| | |||||||||||||
Sbjct: 351 agcttcctgaacttctccatgtgctctgcctgcaatgagatggcgatggacaggctgccg 410
Query: 353 tcgcggttggcgctggggagcacgaacgcgagcccctcgtaggcgatgccgccggggccc 412
|| | | ||||| ||||| |||||||| || |||||||| ||||||||||| || |||
Sbjct: 411 tccttggtcgcgctcgggaggacgaacgccagtccctcgtacgcgatgccgccaggaccc 470
Query: 413 atgaacacgggccgcccccacccgaagtccgcgtcgtggatgggcaggcgcacccagctg 472
|||||||| ||||||||||| ||||| || ||||||||||| ||||||||||||||||||
Sbjct: 471 atgaacaccggccgcccccagccgaaatcggcgtcgtggatcggcaggcgcacccagctg 530
Query: 473 gtgagccccaggttggggcaccggaacgtgtgcgccccgcggaccagcgccgacaggtcc 532
||||| || ||||||||||||||||| |||||||| || ||||||| || |||||||||
Sbjct: 531 gtgaggccgaggttggggcaccggaaagtgtgcgctccacggaccaatgctgacaggtcc 590
Query: 533 ggctgcagctccaggtagtccagcgctgaccggcagta 570
||||||| ||||||||||||||| ||||| |||||||
Sbjct: 591 ggctgcatctccaggtagtccagggctgattggcagta 628
Score = 50.1 bits (25), Expect = 4e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 699 agcggcggctgcagccgctgccgcccgtccgtggcgcagtacagcttggtggg 751
||||| ||||||||||| || ||||| || ||||| || ||||||||||||||
Sbjct: 756 agcgggggctgcagccgttgtcgcccatcggtggcacaatacagcttggtggg 808
>gb|CA616478.1|CA616478 wl1n.pk0003.f4 wl1n Triticum aestivum cDNA clone wl1n.pk0003.f4 5'
end, mRNA sequence
Length = 159
Score = 230 bits (116), Expect = 2e-058
Identities = 145/159 (91%)
Strand = Plus / Minus
Query: 397 gatgccgccggggcccatgaacacgggccgcccccacccgaagtccgcgtcgtggatggg 456
||||| | |||||| ||||| |||||| ||| ||| | ||||||||||||||||||| |
Sbjct: 159 gatgcngncggggcntatgaanacgggcngccnccancngaagtccgcgtcgtggatgng 100
Query: 457 caggcgcacccagctggtgagccccaggttggggcaccggaacgtgtgcgccccgcggac 516
||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 99 caggcgcacccngctggtgagccccaggttggggcncnggaacgtgtgcgccccgcggac 40
Query: 517 cagcgccgacaggtccggctgcagctccaggtagtccag 555
||||||| |||||||||||||||||||||||||||||||
Sbjct: 39 cagcgccnacaggtccggctgcagctccaggtagtccag 1
>gb|CD883568.1|CD883568 F1.113M06F010531 F1 Triticum aestivum cDNA clone F1113M06, mRNA
sequence
Length = 581
Score = 194 bits (98), Expect = 1e-047
Identities = 249/298 (83%), Gaps = 6/298 (2%)
Strand = Plus / Minus
Query: 735 cagtacagcttggtgggctggtcggccggcaggccgcgcgccagggacgcgcaccgccac 794
|||||||||||||||| ||| || | | ||| || || ||||||||||||||||||||
Sbjct: 578 cagtacagcttggtggcctgctctggggacagtccacgggccagggacgcgcaccgccag 519
Query: 795 acgtgcgccgccagcacagcgtacgtgctgaaccgcggcgcgccctcgcgcgcggggacc 854
||||||||| | ||||| ||||| ||||||||||||||||||||||||| || ||||| |
Sbjct: 518 acgtgcgccccgagcaccgcgtaggtgctgaaccgcggcgcgccctcgcccgtggggagc 459
Query: 855 tgcgaacggaggcggacgagctcggcgcgggagagcttgaagatagccacggctgtgggc 914
|| | ||||||||| |||| ||||||||||| ||||||||||| ||||||| ||||||
Sbjct: 458 tgggcgcggaggcggccgaggtcggcgcgggacagcttgaagatgtccacggccgtgggc 399
Query: 915 ggcgtcgccggcttggacgtgagggccgcctgtggcggctcagat---agcatggcgggc 971
|||| ||||||||| ||||||| |||| ||| ||| || ||||||||||||
Sbjct: 398 ggcgcttccggcttggcggtgaggg---cctgcggctcctccgagtccagcatggcgggc 342
Query: 972 gccggctggtactcgatgtgcgggtagcccggggtcggcggatcgcgcgcgcggagga 1029
|| |||||||||||||||||||||| | ||| |||||||| ||||| ||||||||||
Sbjct: 341 gctggctggtactcgatgtgcgggtgggacggcgtcggcgggtcgcgtgcgcggagga 284
>gb|BE420307.1|BE420307 WWS05.B4R000101 ITEC WWS Wheat Scutellum Library Triticum aestivum
cDNA clone WWS05.B4, mRNA sequence
Length = 309
Score = 186 bits (94), Expect = 3e-045
Identities = 187/218 (85%)
Strand = Plus / Minus
Query: 724 cgtccgtggcgcagtacagcttggtgggctggtcggccggcaggccgcgcgccagggacg 783
||||||||||||||||||||||||||||||| || | | |||||| || ||||||||||
Sbjct: 309 cgtccgtggcgcagtacagcttggtgggctgctctggggacaggccacgggccagggacg 250
Query: 784 cgcaccgccacacgtgcgccgccagcacagcgtacgtgctgaaccgcggcgcgccctcgc 843
|||||||||| ||||||||| | ||||| ||||| |||||||||||||||||||||||||
Sbjct: 249 cgcaccgccagacgtgcgccccgagcaccgcgtaggtgctgaaccgcggcgcgccctcgc 190
Query: 844 gcgcggggacctgcgaacggaggcggacgagctcggcgcgggagagcttgaagatagcca 903
| ||||| ||| | ||||||||| |||| ||||||||||| ||||||||||| |||
Sbjct: 189 cagtggggagctgggcgcggaggcggccgaggtcggcgcgggaaagcttgaagatgtcca 130
Query: 904 cggctgtgggcggcgtcgccggcttggacgtgagggcc 941
|||| |||||| ||| ||||||||| |||||||||
Sbjct: 129 cggccgtgggccgcgcttccggcttggcggtgagggcc 92
Score = 65.9 bits (33), Expect = 7e-009
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 960 agcatggcgggcgccggctggtactcgatgtgcgggtagcccggggtcggcggatcgcgc 1019
|||||||||||||| |||||||||||||||||||| | | ||| |||||||| |||||
Sbjct: 73 agcatggcgggcgctggctggtactcgatgtgcggatgggacggcgtcggcgggtcgcgt 14
Query: 1020 gcgcg 1024
|||||
Sbjct: 13 gcgcg 9
>gb|CA691704.1|CA691704 wlm96.pk054.i11 wlm96 Triticum aestivum cDNA clone wlm96.pk054.i11
5' end, mRNA sequence
Length = 456
Score = 182 bits (92), Expect = 4e-044
Identities = 134/149 (89%)
Strand = Plus / Plus
Query: 275 gatcagaagtcgtagatgagcttccggaacttctccatgtgctccgcctgcagcgagatg 334
||||||||||| |||| | |||||||||||||||||| ||||| | |||||||||||||
Sbjct: 186 gatcagaagtcaaagatcatcttccggaacttctccatatgctcggnctgcagcgagatg 245
Query: 335 gccacggacaggctgccgtcgcggttggcgctggggagcacgaacgcgagcccctcgtag 394
||||| |||||||||||||||||| |||||||||||||||||||||| || ||||||||
Sbjct: 246 gccaccgacaggctgccgtcgcggctggcgctggggagcacgaacgcnaggccctcgtac 305
Query: 395 gcgatgccgccggggcccatgaacacggg 423
|| ||||||||||||||||| || |||||
Sbjct: 306 gctatgccgccggggcccatnaagacggg 334
Score = 56.0 bits (28), Expect = 7e-006
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 162 tgtgcaggaactatgtgtgaaatcaaagaat-attgctgcaacctact 208
||||||||||||| ||||| ||||||||||| ||||||||| ||||||
Sbjct: 84 tgtgcaggaactacgtgtgtaatcaaagaatcattgctgcatcctact 131
>gb|CK206040.1|CK206040 FGAS017615 Triticum aestivum FGAS: Library 5 GATE 7 Triticum aestivum
cDNA, mRNA sequence
Length = 1067
Score = 167 bits (84), Expect = 3e-039
Identities = 153/176 (86%)
Strand = Plus / Minus
Query: 960 agcatggcgggcgccggctggtactcgatgtgcgggtagcccggggtcggcggatcgcgc 1019
|||||||||||||| |||||||||||||||||||||| | ||||||||||| || ||
Sbjct: 787 agcatggcgggcgctggctggtactcgatgtgcgggtgggaaggggtcggcgggtcacgt 728
Query: 1020 gcgcggaggagcgaccggtcaatgaagggcatgccggcgatcgggacgccgcggcagagg 1079
||||||||||| | ||||||||||| |||||| |||| ||||| ||||| |||||||||
Sbjct: 727 gcgcggaggagggtgcggtcaatgaacggcatgacggcaatcggcacgccacggcagagg 668
Query: 1080 tccgcccacgagttgatgaagtgcagtccggagaagccgccggccacgtggtgctg 1135
|| ||||| ||||||||||||||||| |||||||||||| | || || ||||||||
Sbjct: 667 tcggcccatgagttgatgaagtgcaggccggagaagccgtccgcgacatggtgctg 612
Score = 101 bits (51), Expect = 1e-019
Identities = 91/103 (88%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 1165 cacttgaagtgggtcacctggagcacgagcagcgggaaggaggagatgtcgtccgtgaag 1224
|||||||||||||||||||||| |||||| |||||| ||||||||||| | | ||||||
Sbjct: 583 cacttgaagtgggtcacctggaccacgaggagcgggtaggaggagatgcccccggtgaag 524
Query: 1225 tcgacggtggggatgaggcgctcgagatcacctggtgggcgcg 1267
||||||| |||||||||||||| ||| || | |||||||||||
Sbjct: 523 tcgacggcggggatgaggcgcttgaggtc-catggtgggcgcg 482
>gb|CK211037.1|CK211037 FGAS022865 Triticum aestivum FGAS: Library 5 GATE 7 Triticum aestivum
cDNA, mRNA sequence
Length = 1118
Score = 147 bits (74), Expect = 2e-033
Identities = 150/176 (85%)
Strand = Plus / Minus
Query: 960 agcatggcgggcgccggctggtactcgatgtgcgggtagcccggggtcggcggatcgcgc 1019
|||||| ||||||| |||||||||||||||||||||| | ||| |||||| || ||
Sbjct: 835 agcatgncgggcgctggctggtactcgatgtgcgggtgggaagggtncggcgggtcacgt 776
Query: 1020 gcgcggaggagcgaccggtcaatgaagggcatgccggcgatcgggacgccgcggcagagg 1079
||||||||||| | ||||||||||| |||||| |||| ||||| ||||| |||||||||
Sbjct: 775 gcgcggaggagggtgcggtcaatgaacggcatgacggcaatcggcacgccacggcagagg 716
Query: 1080 tccgcccacgagttgatgaagtgcagtccggagaagccgccggccacgtggtgctg 1135
|| ||||| ||||||||||||||||| |||||||||||| | || || ||||||||
Sbjct: 715 tcggcccatgagttgatgaagtgcaggccggagaagccgtccgcgacatggtgctg 660
Score = 101 bits (51), Expect = 1e-019
Identities = 91/103 (88%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 1165 cacttgaagtgggtcacctggagcacgagcagcgggaaggaggagatgtcgtccgtgaag 1224
|||||||||||||||||||||| |||||| |||||| ||||||||||| | | ||||||
Sbjct: 631 cacttgaagtgggtcacctggaccacgaggagcgggtaggaggagatgcccccggtgaag 572
Query: 1225 tcgacggtggggatgaggcgctcgagatcacctggtgggcgcg 1267
||||||| |||||||||||||| ||| || | |||||||||||
Sbjct: 571 tcgacggcggggatgaggcgcttgaggtc-catggtgggcgcg 530
Score = 44.1 bits (22), Expect = 0.026
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 861 cggaggcggacgagctcggcgcgggagagcttgaagatagccacggctgtgggcggcg 918
||||| ||| |||| ||||||||||| ||| ||||||| ||||| | ||||||||||
Sbjct: 934 cggagccggccgaggtcggcgcgggacagcctgaagatgtccacgcccgtgggcggcg 877
Score = 42.1 bits (21), Expect = 0.10
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 807 agcacagcgtacgtgctgaaccgcggcgcgccctcgc 843
||||| ||||| ||||||| ||||| |||||||||||
Sbjct: 987 agcaccgcgtaggtgctgacccgcgccgcgccctcgc 951
>gb|BE515450.1|BE515450 WHE0613_F07_K13ZA Wheat ABA-treated embryo cDNA library Triticum
aestivum cDNA clone WHE0613_F07_K13, mRNA sequence
Length = 444
Score = 141 bits (71), Expect = 1e-031
Identities = 116/131 (88%)
Strand = Plus / Minus
Query: 1005 gtcggcggatcgcgcgcgcggaggagcgaccggtcaatgaagggcatgccggcgatcggg 1064
|||||||| ||||| ||||||||||| | ||||||||||| |||||| ||| |||||
Sbjct: 440 gtcggcgggtcgcgtgcgcggaggagggtgcggtcaatgaacggcatgatggcaatcggc 381
Query: 1065 acgccgcggcagaggtccgcccacgagttgatgaagtgcagtccggagaagccgccggcc 1124
||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||
Sbjct: 380 acgccgcggcagaggtcggcccatgagttgatgaagtgcaggccggagaagccgtcggcg 321
Query: 1125 acgtggtgctg 1135
|||||||||||
Sbjct: 320 acgtggtgctg 310
Score = 93.7 bits (47), Expect = 3e-017
Identities = 90/103 (87%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 1165 cacttgaagtgggtcacctggagcacgagcagcgggaaggaggagatgtcgtccgtgaag 1224
|||||||||||||||||||||| |||||| |||||| ||||||||||| | | ||||||
Sbjct: 281 cacttgaagtgggtcacctggaccacgaggagcgggtaggaggagatgcccccggtgaag 222
Query: 1225 tcgacggtggggatgaggcgctcgagatcacctggtgggcgcg 1267
||||||| |||||| ||||||| ||| || | |||||||||||
Sbjct: 221 tcgacggcggggataaggcgcttgaggtc-catggtgggcgcg 180
>gb|CA678229.1|CA678229 wlm12.pk0025.g2 wlm12 Triticum aestivum cDNA clone wlm12.pk0025.g2
5' end, mRNA sequence
Length = 617
Score = 135 bits (68), Expect = 9e-030
Identities = 141/163 (86%), Gaps = 2/163 (1%)
Strand = Plus / Plus
Query: 293 agcttccggaacttctccatgtgctccgcctgcagcgagatggccacggacaggctgccg 352
||||||| |||||||||||||||||||||||||| ||||||||| | ||| |||||||||
Sbjct: 199 agcttcctgaacttctccatgtgctccgcctgcaacgagatggcgatggagaggctgccg 258
Query: 353 tcgcggttggcgctggggagcacgaacgcgagcccct-cgtaggcgatgccgccggggcc 411
|| | | ||||| ||||| |||||||| ||||||| |||| ||||||||||| ||||
Sbjct: 259 tccttggtcgcgctcgggaggacgaacgccagcccctccgtacgcgatgccgccaaggcc 318
Query: 412 catgaacacgggccgccccc-acccgaagtccgcgtcgtggat 453
||||||||| |||||||||| ||||||| || ||||| |||||
Sbjct: 319 catgaacaccggccgcccccaacccgaaatcggcgtcntggat 361
>gb|CD937367.1|CD937367 OV.106M21F010202 OV Triticum aestivum cDNA clone OV106M21, mRNA
sequence
Length = 725
Score = 133 bits (67), Expect = 4e-029
Identities = 115/131 (87%)
Strand = Plus / Minus
Query: 1005 gtcggcggatcgcgcgcgcggaggagcgaccggtcaatgaagggcatgccggcgatcggg 1064
|||||||| ||||| ||||| || || | ||||||||||| |||||| |||| |||||
Sbjct: 723 gtcggcgggtcgcgtgcgcgaagaagggtgcggtcaatgaacggcatgacggcaatcggc 664
Query: 1065 acgccgcggcagaggtccgcccacgagttgatgaagtgcagtccggagaagccgccggcc 1124
||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||
Sbjct: 663 acgccgcggcagaggtcggcccatgagttgatgaagtgcaggccggagaagccgtcggcg 604
Query: 1125 acgtggtgctg 1135
|||||||||||
Sbjct: 603 acgtggtgctg 593
Score = 101 bits (51), Expect = 1e-019
Identities = 91/103 (88%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 1165 cacttgaagtgggtcacctggagcacgagcagcgggaaggaggagatgtcgtccgtgaag 1224
|||||||||||||||||||||| |||||| |||||| ||||||||||| | | ||||||
Sbjct: 564 cacttgaagtgggtcacctggaccacgaggagcgggtaggaggagatgcccccggtgaag 505
Query: 1225 tcgacggtggggatgaggcgctcgagatcacctggtgggcgcg 1267
||||||| |||||||||||||| ||| || | |||||||||||
Sbjct: 504 tcgacggcggggatgaggcgcttgaggtc-catggtgggcgcg 463
>gb|CA614785.1|CA614785 wr1.pk177.h6 wr1 Triticum aestivum cDNA clone wr1.pk177.h6 5' end,
mRNA sequence
Length = 531
Score = 123 bits (62), Expect = 3e-026
Identities = 103/114 (90%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 275 gatcagaagtcgtagatgagcttccggaacttctccatgtgctccgcctgcagcgagatg 334
||||||||||| |||| | ||||||||||| |||||| ||||| |||||||||||||||
Sbjct: 208 gatcagaagtcaaagatcatcttccggaact-ctccatatgctcggcctgcagcgagatg 266
Query: 335 gccacggacaggctgccgtcgcgg-ttggcgctggggagcacgaacgcgagccc 387
||||| |||||||||||||||||| | |||||||||||||||||| ||||||||
Sbjct: 267 gccaccgacaggctgccgtcgcggctgggcgctggggagcacgaatgcgagccc 320
Score = 46.1 bits (23), Expect = 0.007
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 162 tgtgcaggaactatgtgtgaaatcaaagaat 192
||||||||||||| ||||| |||||||||||
Sbjct: 110 tgtgcaggaactacgtgtgtaatcaaagaat 140
>gb|BJ286085.1|BJ286085 BJ286085 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr19d01 3', mRNA sequence
Length = 285
Score = 109 bits (55), Expect = 5e-022
Identities = 109/127 (85%)
Strand = Plus / Plus
Query: 293 agcttccggaacttctccatgtgctccgcctgcagcgagatggccacggacaggctgccg 352
||||||| |||||||||||||||||| ||||||| |||||||| | |||||||||||||
Sbjct: 159 agcttcctgaacttctccatgtgctctgcctgcaatgagatggcgatggacaggctgccg 218
Query: 353 tcgcggttggcgctggggagcacgaacgcgagcccctcgtaggcgatgccgccggggccc 412
|| | | ||||| ||||| |||||||| || |||||||| ||||||||||| || |||
Sbjct: 219 tccttggtcgcgctcgggaggacgaacgccagtccctcgtacgcgatgccgccaggaccc 278
Query: 413 atgaaca 419
|||||||
Sbjct: 279 atgaaca 285
>gb|CK206184.1|CK206184 FGAS017763 Triticum aestivum FGAS: Library 5 GATE 7 Triticum aestivum
cDNA, mRNA sequence
Length = 1094
Score = 109 bits (55), Expect = 5e-022
Identities = 92/103 (89%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 1165 cacttgaagtgggtcacctggagcacgagcagcgggaaggaggagatgtcgtccgtgaag 1224
|||||||||| ||||||||| |||||||| |||||||||||||| |||||||||| | ||
Sbjct: 558 cacttgaagtaggtcacctgaagcacgaggagcgggaaggaggatatgtcgtccgagtag 499
Query: 1225 tcgacggtggggatgaggcgctcgagatcacctggtgggcgcg 1267
||||||| |||||||||||||| ||| || | |||||||||||
Sbjct: 498 tcgacggcggggatgaggcgcttgaggtc-catggtgggcgcg 457
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 1071 cggcagaggtccgcccacgagttgatgaagtgca 1104
||||||||||| | ||||||||||||||||||||
Sbjct: 651 cggcagaggtcagaccacgagttgatgaagtgca 618
>gb|CV777285.1|CV777285 FGAS071690 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 814
Score = 109 bits (55), Expect = 5e-022
Identities = 92/103 (89%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 1165 cacttgaagtgggtcacctggagcacgagcagcgggaaggaggagatgtcgtccgtgaag 1224
|||||||||| ||||||||| |||||||| |||||||||||||| |||||||||| | ||
Sbjct: 579 cacttgaagtaggtcacctgaagcacgaggagcgggaaggaggatatgtcgtccgagtag 520
Query: 1225 tcgacggtggggatgaggcgctcgagatcacctggtgggcgcg 1267
||||||| |||||||||||||| ||| || | |||||||||||
Sbjct: 519 tcgacggcggggatgaggcgcttgaggtc-catggtgggcgcg 478
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 1071 cggcagaggtccgcccacgagttgatgaagtgca 1104
||||||||||| |||| |||||||||||||||||
Sbjct: 672 cggcagaggtcagcccccgagttgatgaagtgca 639
>gb|BQ804331.1|BQ804331 WHE3553_C05_F09ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3553_C05_F09, mRNA sequence
Length = 687
Score = 105 bits (53), Expect = 8e-021
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 1059 atcgggacgccgcggcagaggtccgcccacgagttgatgaagtgcagtccggagaagccg 1118
||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 681 atcggcacgccgcggcagaggtcggcccatgagttgatgaagtgcaggccggagaagccg 622
Query: 1119 ccggccacgtggtgctg 1135
|||| |||||||||||
Sbjct: 621 tcggcgacgtggtgctg 605
Score = 93.7 bits (47), Expect = 3e-017
Identities = 90/103 (87%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 1165 cacttgaagtgggtcacctggagcacgagcagcgggaaggaggagatgtcgtccgtgaag 1224
|||||||||||||||||||||| |||||| |||||| ||||||||||| | | ||||||
Sbjct: 576 cacttgaagtgggtcacctggaccacgaggagcgggtaggaggagatgcccccggtgaag 517
Query: 1225 tcgacggtggggatgaggcgctcgagatcacctggtgggcgcg 1267
||||||| |||||| ||||||| ||| || | |||||||||||
Sbjct: 516 tcgacggcggggataaggcgcttgaggtc-catggtgggcgcg 475
>gb|CA726875.1|CA726875 wde1f.pk002.k1 wde1f Triticum aestivum cDNA clone wde1f.pk002.k1 5'
end, mRNA sequence
Length = 615
Score = 105 bits (53), Expect = 8e-021
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 1059 atcgggacgccgcggcagaggtccgcccacgagttgatgaagtgcagtccggagaagccg 1118
||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 601 atcggcacgccgcggcagaggtcggcccatgagttgatgaagtgcaggccggagaagccg 542
Query: 1119 ccggccacgtggtgctg 1135
|||| |||||||||||
Sbjct: 541 tcggcgacgtggtgctg 525
Score = 101 bits (51), Expect = 1e-019
Identities = 91/103 (88%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 1165 cacttgaagtgggtcacctggagcacgagcagcgggaaggaggagatgtcgtccgtgaag 1224
|||||||||||||||||||||| |||||| |||||| ||||||||||| | | ||||||
Sbjct: 496 cacttgaagtgggtcacctggaccacgaggagcgggtaggaggagatgcccccggtgaag 437
Query: 1225 tcgacggtggggatgaggcgctcgagatcacctggtgggcgcg 1267
||||||| |||||||||||||| ||| || | |||||||||||
Sbjct: 436 tcgacggcggggatgaggcgcttgaggtc-catggtgggcgcg 395
>gb|AL822978.1|AL822978 AL822978 p:335 Triticum aestivum cDNA clone C04_p335_plate_5, mRNA
sequence
Length = 358
Score = 103 bits (52), Expect = 3e-020
Identities = 91/103 (88%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 1165 cacttgaagtgggtcacctggagcacgagcagcgggaaggaggagatgtcgtccgtgaag 1224
|||||||||| |||||| || |||||||| |||||||||||||| |||||||||| | ||
Sbjct: 214 cacttgaagtaggtcacntgaagcacgaggagcgggaaggaggatatgtcgtccgagtag 155
Query: 1225 tcgacggtggggatgaggcgctcgagatcacctggtgggcgcg 1267
||||||| |||||||||||||| ||| || | |||||||||||
Sbjct: 154 tcgacggcggggatgaggcgcttgaggtc-catggtgggcgcg 113
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 1071 cggcagaggtccgcccacgagttgatgaagtgca 1104
||||||||||| | ||||||||||||||||||||
Sbjct: 307 cggcagaggtcagaccacgagttgatgaagtgca 274
>gb|CD882468.1|CD882468 F1.106O03F010330 F1 Triticum aestivum cDNA clone F1106O03, mRNA
sequence
Length = 722
Score = 101 bits (51), Expect = 1e-019
Identities = 91/103 (88%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 1165 cacttgaagtgggtcacctggagcacgagcagcgggaaggaggagatgtcgtccgtgaag 1224
|||||||||||||||||||||| |||||| |||||| ||||||||||| | | ||||||
Sbjct: 544 cacttgaagtgggtcacctggaccacgaggagcgggtaggaggagatgcccccggtgaag 485
Query: 1225 tcgacggtggggatgaggcgctcgagatcacctggtgggcgcg 1267
||||||| |||||||||||||| ||| || | |||||||||||
Sbjct: 484 tcgacggcggggatgaggcgcttgaggtc-catggtgggcgcg 443
Score = 95.6 bits (48), Expect = 8e-018
Identities = 84/96 (87%)
Strand = Plus / Minus
Query: 1040 aatgaagggcatgccggcgatcgggacgccgcggcagaggtccgcccacgagttgatgaa 1099
|||||| |||||| |||| ||||| ||||| ||||||||||| ||||| |||||||||||
Sbjct: 668 aatgaacggcatgacggcaatcggcacgccacggcagaggtcggcccatgagttgatgaa 609
Query: 1100 gtgcagtccggagaagccgccggccacgtggtgctg 1135
|||||| |||||||||||| | || || ||||||||
Sbjct: 608 gtgcaggccggagaagccgtccgcgacatggtgctg 573
>gb|CD928158.1|CD928158 GR45.104C12F010316 GR45 Triticum aestivum cDNA clone GR45104C12, mRNA
sequence
Length = 757
Score = 101 bits (51), Expect = 1e-019
Identities = 91/103 (88%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 1165 cacttgaagtgggtcacctggagcacgagcagcgggaaggaggagatgtcgtccgtgaag 1224
|||||||||||||||||||||| |||||| |||||| ||||||||||| | | ||||||
Sbjct: 585 cacttgaagtgggtcacctggaccacgaggagcgggtaggaggagatgcccccggtgaag 526
Query: 1225 tcgacggtggggatgaggcgctcgagatcacctggtgggcgcg 1267
||||||| |||||||||||||| ||| || | |||||||||||
Sbjct: 525 tcgacggcggggatgaggcgcttgaggtc-catggtgggcgcg 484
Score = 97.6 bits (49), Expect = 2e-018
Identities = 88/101 (87%)
Strand = Plus / Minus
Query: 1035 cggtcaatgaagggcatgccggcgatcgggacgccgcggcagaggtccgcccacgagttg 1094
||||||||||| |||||| |||| ||||| ||||| || |||||||| ||||| ||||||
Sbjct: 714 cggtcaatgaacggcatgacggcaatcggcacgccacgtcagaggtcggcccatgagttg 655
Query: 1095 atgaagtgcagtccggagaagccgccggccacgtggtgctg 1135
||||||||||| |||||||||||| | || || ||||||||
Sbjct: 654 atgaagtgcaggccggagaagccgtccgcgacatggtgctg 614
>gb|CK200551.1|CK200551 FGAS009067 Triticum aestivum FGAS: Library 3 Gate 6 Triticum aestivum
cDNA, mRNA sequence
Length = 789
Score = 93.7 bits (47), Expect = 3e-017
Identities = 90/103 (87%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 1165 cacttgaagtgggtcacctggagcacgagcagcgggaaggaggagatgtcgtccgtgaag 1224
|||||||||||||||||||||| |||||| |||||| ||||||||||| | | ||||||
Sbjct: 633 cacttgaagtgggtcacctggaccacgaggagcgggtaggaggagatgcccccggtgaag 574
Query: 1225 tcgacggtggggatgaggcgctcgagatcacctggtgggcgcg 1267
||||||| |||||| ||||||| ||| || | |||||||||||
Sbjct: 573 tcgacggcggggataaggcgcttgaggtc-catggtgggcgcg 532
Score = 50.1 bits (25), Expect = 4e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 1095 atgaagtgcagtccggagaagccgccggccacgtggtgctg 1135
||||||||||| |||||||||||| || | |||||||||||
Sbjct: 702 atgaagtgcaggccggagaagccgtcgccgacgtggtgctg 662
>gb|CV774140.1|CV774140 FGAS068537 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 843
Score = 93.7 bits (47), Expect = 3e-017
Identities = 90/103 (87%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 1165 cacttgaagtgggtcacctggagcacgagcagcgggaaggaggagatgtcgtccgtgaag 1224
|||||||||| ||||||||| ||||| || |||||||||||||| |||||||| ||| ||
Sbjct: 566 cacttgaagtaggtcacctgaagcaccaggagcgggaaggaggatatgtcgtcggtgtag 507
Query: 1225 tcgacggtggggatgaggcgctcgagatcacctggtgggcgcg 1267
||||||| ||||||||||||| ||| || | |||||||||||
Sbjct: 506 tcgacgggcgggatgaggcgcttgaggtc-catggtgggcgcg 465
Score = 44.1 bits (22), Expect = 0.026
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 1071 cggcagaggtccgcccacgagttgatgaagtgca 1104
||||||||||| | ||||||||||||||| ||||
Sbjct: 658 cggcagaggtcagaccacgagttgatgaaatgca 625
>gb|CA693740.1|CA693740 wlmk4.pk0007.c8 wlmk4 Triticum aestivum cDNA clone wlmk4.pk0007.c8
5' end, mRNA sequence
Length = 630
Score = 87.7 bits (44), Expect = 2e-015
Identities = 104/120 (86%), Gaps = 3/120 (2%)
Strand = Plus / Plus
Query: 306 tctccatgtgctccgcctgcagcgagatggccacggacaggctgccgt-cgcggttggcg 364
||||||| ||||||| |||||||||||||||||| ||||||||||||| | || | ||||
Sbjct: 245 tctccatatgctccggctgcagcgagatggccaccgacaggctgccgtccccgctgggcg 304
Query: 365 ct-ggggagcacgaacgcgagcccctcgtaggcgatgccg-ccggggcccatgaacacgg 422
|| ||||||||| ||||| | ||| |||| ||||||||| |||||||| ||||||||||
Sbjct: 305 ctgggggagcacaaacgccacccctccgtacgcgatgccgcccggggccaatgaacacgg 364
Score = 56.0 bits (28), Expect = 7e-006
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 162 tgtgcaggaactatgtgtgaaatcaaagaat-attgctgcaacctact 208
||||||||||||| ||||| ||||||||||| ||||||||| ||||||
Sbjct: 114 tgtgcaggaactacgtgtgtaatcaaagaatcattgctgcatcctact 161
>gb|CK200258.1|CK200258 FGAS008768 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 819
Score = 85.7 bits (43), Expect = 8e-015
Identities = 117/139 (84%), Gaps = 2/139 (1%)
Strand = Plus / Plus
Query: 275 gatcagaagtcgtagatgagcttccggaacttctccatgtgctccgcctgcagcgagatg 334
||||||||||| |||| | ||| |||||||||||||| ||||| ||||| |||||||||
Sbjct: 349 gatcagaagtcaaagatcatcttgcggaacttctccatatgctcggcctggagcgagatg 408
Query: 335 gccacggacaggctgccgtc-gcggttggcgctggggagcacgaacgcgagcccctcgta 393
| ||| |||||||||||||| | || ||| ||||||||| | ||| || || |||||||
Sbjct: 409 ggcac-gacaggctgccgtcggggggtggtgctggggaggaggaatgcaagtgcctcgta 467
Query: 394 ggcgatgccgccggggccc 412
||||||| || ||||||||
Sbjct: 468 ggcgatgtcggcggggccc 486
Score = 42.1 bits (21), Expect = 0.10
Identities = 44/49 (89%), Gaps = 2/49 (4%)
Strand = Plus / Plus
Query: 162 tgtgcaggaact-atgtgtgaaatcaaagaat-attgctgcaacctact 208
|||||||||||| | ||||| ||||||||||| ||||||||| ||||||
Sbjct: 246 tgtgcaggaactcacgtgtgtaatcaaagaatcattgctgcatcctact 294
>gb|CV762236.1|CV762236 FGAS056625 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 859
Score = 85.7 bits (43), Expect = 8e-015
Identities = 89/103 (86%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 1165 cacttgaagtgggtcacctggagcacgagcagcgggaaggaggagatgtcgtccgtgaag 1224
|||||||||||||||||||| |||||| |||||| ||||||||||| | | ||||||
Sbjct: 679 cacttgaagtgggtcacctgacccacgaggagcgggtaggaggagatgcccccggtgaag 620
Query: 1225 tcgacggtggggatgaggcgctcgagatcacctggtgggcgcg 1267
||||||| |||||||||||||| ||| || | |||||||||||
Sbjct: 619 tcgacggcggggatgaggcgcttgaggtc-catggtgggcgcg 578
Score = 67.9 bits (34), Expect = 2e-009
Identities = 77/90 (85%), Gaps = 1/90 (1%)
Strand = Plus / Minus
Query: 1047 ggcatgccggcgatcgggacg-ccgcggcagaggtccgcccacgagttgatgaagtgcag 1105
|||||| |||| ||||| ||| || ||||||||||| ||||| |||||||||||||||||
Sbjct: 797 ggcatgacggcaatcggcacggccacggcagaggtcggcccatgagttgatgaagtgcag 738
Query: 1106 tccggagaagccgccggccacgtggtgctg 1135
|||||| ||||| | || || ||||||||
Sbjct: 737 cccggaggagccgtccgcgacatggtgctg 708
>gb|CV780967.1|CV780967 FGAS075378 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 845
Score = 85.7 bits (43), Expect = 8e-015
Identities = 89/103 (86%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 1165 cacttgaagtgggtcacctggagcacgagcagcgggaaggaggagatgtcgtccgtgaag 1224
|||||||||||||||||||||| |||||| ||| || ||||||||||| | | ||||||
Sbjct: 669 cacttgaagtgggtcacctggaccacgaggagccggtaggaggagatgcccccggtgaag 610
Query: 1225 tcgacggtggggatgaggcgctcgagatcacctggtgggcgcg 1267
||||||| |||||| ||||||| ||| || | |||||||||||
Sbjct: 609 tcgacggcggggataaggcgcttgaggtc-catggtgggcgcg 568
>gb|CK199238.1|CK199238 FGAS007732 Triticum aestivum FGAS: Library 3 Gate 6 Triticum aestivum
cDNA, mRNA sequence
Length = 815
Score = 79.8 bits (40), Expect = 5e-013
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 1175 gggtcacctggagcacgagcagcgggaaggaggagatgtcgtccgtgaagtcgacggtgg 1234
|||||||||||| |||||| |||||| ||||||||||| | | ||||||||||||| ||
Sbjct: 679 gggtcacctggaccacgaggagcgggtaggaggagatgcccccggtgaagtcgacggcgg 620
Query: 1235 ggatgaggcgct 1246
||||||||||||
Sbjct: 619 ggatgaggcgct 608
Score = 60.0 bits (30), Expect = 4e-007
Identities = 81/98 (82%)
Strand = Plus / Minus
Query: 1038 tcaatgaagggcatgccggcgatcgggacgccgcggcagaggtccgcccacgagttgatg 1097
|||||||| |||||| |||| ||||| ||||| |||||||| ||||| |||||||||
Sbjct: 815 tcaatgaacggcatgacggcaatcggcacgccacggcagagtcgggcccatgagttgatg 756
Query: 1098 aagtgcagtccggagaagccgccggccacgtggtgctg 1135
|||||||| | |||||| ||| | || || ||||||||
Sbjct: 755 aagtgcagccgggagaacccgtccgcgacatggtgctg 718
>gb|CK199765.1|CK199765 FGAS008272 Triticum aestivum FGAS: Library 3 Gate 6 Triticum aestivum
cDNA, mRNA sequence
Length = 842
Score = 69.9 bits (35), Expect = 5e-010
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 1165 cacttgaagtgggtcacctggagcacgagcagcgggaaggaggagatgtcgtccg 1219
|||||||||| ||||||||| |||||||| |||||||||||||| || |||||||
Sbjct: 655 cacttgaagtaggtcacctgaagcacgaggagcgggaaggaggatatatcgtccg 601
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 1071 cggcagaggtccgcccacgagttgatgaagtgca 1104
||||||||||| | ||||||||||||||||||||
Sbjct: 747 cggcagaggtcagaccacgagttgatgaagtgca 714
>gb|CA733196.1|CA733196 wlp1c.pk007.l14 wlp1c Triticum aestivum cDNA clone wlp1c.pk007.l14 5'
end, mRNA sequence
Length = 610
Score = 60.0 bits (30), Expect = 4e-007
Identities = 80/97 (82%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 1171 aagtgggtcacctggagcacgagcagcgggaaggaggagatgtcgtccgtgaagtcgacg 1230
|||||||||||||||| |||| |||| ||||||||||| | | ||||||||||||
Sbjct: 554 aagtgggtcacctggaccacgnnnnncgggtaggaggagatgcccccggtgaagtcgacg 495
Query: 1231 gtggggatgaggcgctcgagatcacctggtgggcgcg 1267
| |||||| ||||||| ||| || | |||||||||||
Sbjct: 494 gcggggataaggcgcttgaggtc-catggtgggcgcg 459
>gb|CA729853.1|CA729853 wip1c.pk002.c21 wip1c Triticum aestivum cDNA clone wip1c.pk002.c21 5'
end, mRNA sequence
Length = 565
Score = 52.0 bits (26), Expect = 1e-004
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 1202 aggaggagatgtcgtccgtgaagtcgacggtggggatgaggcgctcgagatcacctggtg 1261
||||||||||| | | ||||||||||||| |||||||||||||| ||| || | |||||
Sbjct: 527 aggaggagatgcccccggtgaagtcgacggcggggatgaggcgcttgaggtc-catggtg 469
Query: 1262 ggcgcg 1267
||||||
Sbjct: 468 ggcgcg 463
>gb|CA695532.1|CA695532 wlmk8.pk0011.a3 wlmk8 Triticum aestivum cDNA clone wlmk8.pk0011.a3
5' end, mRNA sequence
Length = 678
Score = 50.1 bits (25), Expect = 4e-004
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 699 agcggcggctgcagccgctgccgcccgtccgtggcgcagtacagcttggtggg 751
||||| ||||||||||| || ||||| || ||||| || ||||||||||||||
Sbjct: 345 agcgggggctgcagccgttgtcgcccatcggtggcacaatacagcttggtggg 293
>gb|CV768301.1|CV768301 FGAS062692 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 836
Score = 50.1 bits (25), Expect = 4e-004
Identities = 71/85 (83%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 1162 ccccacttgaagtgggtcacctggagcacgagc-agcgggaaggaggagatgtcgtccgt 1220
|||| ||| |||||||||||||||| | | || |||||| ||||||||||| | | ||
Sbjct: 686 ccccccttaaagtgggtcacctggacccccagggagcgggtaggaggagatgcccccggt 627
Query: 1221 gaagtcgacggtggggatgaggcgc 1245
||||||||||| |||||| ||||||
Sbjct: 626 gaagtcgacggcggggataaggcgc 602
>gb|BE405852.1|BE405852 WHE0425_A06_A11ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0425_A06_A11, mRNA
sequence
Length = 543
Score = 48.1 bits (24), Expect = 0.002
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 676 cgttgccgaagtagccctccggaagcggcggc 707
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Sbjct: 398 cgttgccgaagtagccgtccggaagaggcggc 367
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 367,941
Number of Sequences: 636343
Number of extensions: 367941
Number of successful extensions: 113712
Number of sequences better than 0.5: 88
Number of HSP's better than 0.5 without gapping: 87
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 113511
Number of HSP's gapped (non-prelim): 170
length of query: 1395
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1375
effective length of database: 354,513,379
effective search space: 487455896125
effective search space used: 487455896125
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)