BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2448655.2.1
(682 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ743225.1|BQ743225 WHE4101_E11_I21ZS Wheat salt-stresse... 387 e-106
gb|CD872783.1|CD872783 AZO2.121I12R010405 AZO2 Triticum aes... 379 e-103
gb|CF134208.1|CF134208 WHE4369_B08_D15ZT Wheat meiotic flor... 379 e-103
gb|DR741182.1|DR741182 FGAS001114 Triticum aestivum FGAS: L... 333 9e-090
gb|CV522439.1|CV522439 RH-592 Triticum aestivum subtracted,... 305 2e-081
gb|AL811207.1|AL811207 AL811207 d:37 Triticum aestivum cDNA... 303 8e-081
gb|CV522228.1|CV522228 RH-453 Triticum aestivum subtracted,... 299 1e-079
gb|CV522230.1|CV522230 RH-529 Triticum aestivum subtracted,... 272 3e-071
gb|CD867159.1|CD867159 AZO2.105I06F001123 AZO2 Triticum aes... 264 7e-069
gb|CA615643.1|CA615643 wr1.pk170.g10 wr1 Triticum aestivum ... 172 2e-041
gb|CD872782.1|CD872782 AZO2.121I12F010209 AZO2 Triticum aes... 151 7e-035
gb|CA659240.1|CA659240 wlm1.pk0001.c11 wlm1 Triticum aestiv... 121 7e-026
gb|CD889117.1|CD889117 G118.111A06F010720 G118 Triticum aes... 117 1e-024
gb|BG905419.1|BG905419 TaLr1139F03F TaLr1 Triticum aestivum... 80 2e-013
gb|DR739905.1|DR739905 FGAS000172 Triticum aestivum FGAS: L... 70 2e-010
gb|AL821565.1|AL821565 AL821565 p:133 Triticum aestivum cDN... 64 1e-008
gb|CA605590.1|CA605590 wr1.pk0055.h7 wr1 Triticum aestivum ... 58 8e-007
gb|CA622828.1|CA622828 wl1n.pk0099.f8 wl1n Triticum aestivu... 52 5e-005
gb|BG905582.1|BG905582 TaLr1140G04F TaLr1 Triticum aestivum... 50 2e-004
>gb|BQ743225.1|BQ743225 WHE4101_E11_I21ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4101_E11_I21, mRNA sequence
Length = 700
Score = 387 bits (195), Expect = e-106
Identities = 324/367 (88%)
Strand = Plus / Plus
Query: 5 caccatgagttcactgcgccaataggattcgcagctccatatgcacactgggctgaggtg 64
|||||||||| ||| ||||| || || || || || ||||| ||||||||||| |||||
Sbjct: 217 caccatgagtacaccgcgcccattggctttgccgcgccatacgcacactgggcagaggtt 276
Query: 65 ctgatactcggcatcccctccttcgtcgggccagccattgttccaggccacatgatcaca 124
|| |||||||||||||||||||||| ||||||||||||| |||||||||||||| |||
Sbjct: 277 ctcatactcggcatcccctccttcgctgggccagccattgcaccaggccacatgataaca 336
Query: 125 ttctggctctggattatactccgtcaggtggaggctatcgagacacatagcggctttgat 184
|||||||||||||||||||| |||||| |||| || || || ||||| ||||| ||||||
Sbjct: 337 ttctggctctggattatacttcgtcagatggaagccattgatacacacagcggttttgat 396
Query: 185 ttcccattcaccccgacaaagtatattccattctatggaggagcagaataccatgactat 244
|||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 397 ttcccattcagcctgacaaagtatattccattctatggaggagcagaataccatgattat 456
Query: 245 catcattatgtaggaggccagagccaaagcaattttgcttctgttttcacttactgtgat 304
||||| || || |||||||| ||||| |||||||||||||| |||||||| |||||||||
Sbjct: 457 catcactacgttggaggccaaagccagagcaattttgcttccgttttcacgtactgtgat 516
Query: 305 tacttatatggcactgacaaaggttacagattccacaaaacatacctagcaaagctgaag 364
||| ||||||| || |||| ||||||||||||||||||| | ||| |||||||| |||||
Sbjct: 517 tacctatatgggaccgacagaggttacagattccacaaagcttacttagcaaagttgaag 576
Query: 365 gatctgg 371
|||||||
Sbjct: 577 gatctgg 583
>gb|CD872783.1|CD872783 AZO2.121I12R010405 AZO2 Triticum aestivum cDNA clone AZO2121I12,
mRNA sequence
Length = 728
Score = 379 bits (191), Expect = e-103
Identities = 323/367 (88%)
Strand = Plus / Minus
Query: 5 caccatgagttcactgcgccaataggattcgcagctccatatgcacactgggctgaggtg 64
|||||||||| ||| ||||| || || || ||||| ||||| ||||||||||| ||||||
Sbjct: 611 caccatgagtacaccgcgcccattggctttgcagcgccatacgcacactgggcagaggtg 552
Query: 65 ctgatactcggcatcccctccttcgtcgggccagccattgttccaggccacatgatcaca 124
|| ||||| |||||||||||||||| ||||| ||||||| |||||||||||||| |||
Sbjct: 551 ctcatacttggcatcccctccttcgctgggccggccattgcaccaggccacatgataaca 492
Query: 125 ttctggctctggattatactccgtcaggtggaggctatcgagacacatagcggctttgat 184
|||||||||||||||||||| |||||| |||| || || || ||||| ||||| ||||||
Sbjct: 491 ttctggctctggattatacttcgtcagatggaagccattgacacacacagcggttttgat 432
Query: 185 ttcccattcaccccgacaaagtatattccattctatggaggagcagaataccatgactat 244
|||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 431 ttcccattcagcctgacaaagtatattccattctatggaggagcagaataccatgattat 372
Query: 245 catcattatgtaggaggccagagccaaagcaattttgcttctgttttcacttactgtgat 304
||||| || || |||||||| ||||| |||||||||||||| |||||||| |||||||||
Sbjct: 371 catcactacgttggaggccaaagccagagcaattttgcttccgttttcacgtactgtgat 312
Query: 305 tacttatatggcactgacaaaggttacagattccacaaaacatacctagcaaagctgaag 364
||| ||||||| || |||| |||||||||||||||||| | ||| |||||||| |||||
Sbjct: 311 tacctatatgggaccgacagaggttacagattccacaaggcttacttagcaaagttgaag 252
Query: 365 gatctgg 371
|||||||
Sbjct: 251 gatctgg 245
>gb|CF134208.1|CF134208 WHE4369_B08_D15ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4369_B08_D15, mRNA sequence
Length = 782
Score = 379 bits (191), Expect = e-103
Identities = 323/367 (88%)
Strand = Plus / Plus
Query: 5 caccatgagttcactgcgccaataggattcgcagctccatatgcacactgggctgaggtg 64
|||||||||| ||| ||||| || || || ||||| ||||| ||||||||||| ||||||
Sbjct: 371 caccatgagtacaccgcgcccattggctttgcagcgccatacgcacactgggcagaggtg 430
Query: 65 ctgatactcggcatcccctccttcgtcgggccagccattgttccaggccacatgatcaca 124
|| ||||| |||||||||||||||| ||||| ||||||| |||||||||||||| |||
Sbjct: 431 ctcatacttggcatcccctccttcgctgggccggccattgcaccaggccacatgataaca 490
Query: 125 ttctggctctggattatactccgtcaggtggaggctatcgagacacatagcggctttgat 184
|||||||||||||||||||| |||||| |||| || || || ||||| ||||| ||||||
Sbjct: 491 ttctggctctggattatacttcgtcagatggaagccattgacacacacagcggttttgat 550
Query: 185 ttcccattcaccccgacaaagtatattccattctatggaggagcagaataccatgactat 244
|||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 551 ttcccattcagcctgacaaagtatattccattctatggaggagcagaataccatgattat 610
Query: 245 catcattatgtaggaggccagagccaaagcaattttgcttctgttttcacttactgtgat 304
||||| || || |||||||| ||||| |||||||||||||| |||||||| |||||||||
Sbjct: 611 catcactacgttggaggccaaagccagagcaattttgcttccgttttcacgtactgtgat 670
Query: 305 tacttatatggcactgacaaaggttacagattccacaaaacatacctagcaaagctgaag 364
||| ||||||| || |||| |||||||||||||||||| | ||| |||||||| |||||
Sbjct: 671 tacctatatgggaccgacagaggttacagattccacaaggcttacttagcaaagttgaag 730
Query: 365 gatctgg 371
|||||||
Sbjct: 731 gatctgg 737
>gb|DR741182.1|DR741182 FGAS001114 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1091
Score = 333 bits (168), Expect = 9e-090
Identities = 322/368 (87%), Gaps = 4/368 (1%)
Strand = Plus / Plus
Query: 5 caccatgagttcactgcgccaataggattcgcagctccatatgcacactgggctgaggtg 64
|||||||||| ||| ||||| || || || ||||| ||||| ||||||||||| ||||||
Sbjct: 512 caccatgagtacaccgcgcccattggctttgcagcgccatacgcacactgggcagaggtg 571
Query: 65 ctgatactcggcatcccctccttcgtcgggccagccattgttccaggccacatgatcaca 124
|| ||||| |||||||||||||||| ||||| ||||||| |||||||||||||| |||
Sbjct: 572 ctcatacttggcatcccctccttcgctgggccggccattgcaccaggccacatgataaca 631
Query: 125 ttctggctctggattatactccgtcaggtggaggctatcgagacacatagcggctttgat 184
|||||||||||||||||||| |||||| |||| || || || ||||| ||||| ||||||
Sbjct: 632 ttctggctctggattatacttcgtcagatggaagccattgacacacacagcggttttgat 691
Query: 185 ttcccattca-ccccgacaaagtatattccattctatggaggagcagaataccatgacta 243
|||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 692 ttcccattcagccctgac-aagtatattccattctatggaggagcagaataccatgatta 750
Query: 244 tcatcattatgtaggaggccagagccaaagcaattttgcttctgttttcacttactgtga 303
|||||| || || |||||||| ||||| |||||||||||||| |||||||| ||||||||
Sbjct: 751 tcatcactacgttggaggcca-agccagagcaattttgcttccgttttcacgtactgtga 809
Query: 304 ttacttatatggcactgacaaaggttacagattccacaaaacatacctagcaaagctgaa 363
|||| ||||||| || |||| |||||||||||||||| | | ||| |||||||| ||||
Sbjct: 810 ttacctatatgggaccgacagaggttacagattccac-aggcttacttagcaaagttgaa 868
Query: 364 ggatctgg 371
||||||||
Sbjct: 869 ggatctgg 876
>gb|CV522439.1|CV522439 RH-592 Triticum aestivum subtracted, clontech Triticum aestivum
cDNA, mRNA sequence
Length = 497
Score = 305 bits (154), Expect = 2e-081
Identities = 256/290 (88%)
Strand = Plus / Plus
Query: 5 caccatgagttcactgcgccaataggattcgcagctccatatgcacactgggctgaggtg 64
|||||||||| ||| ||||| || || || || || ||||| ||||||||||| |||||
Sbjct: 186 caccatgagtacaccgcgcccattggctttgccgcgccatacgcacactgggcagaggtt 245
Query: 65 ctgatactcggcatcccctccttcgtcgggccagccattgttccaggccacatgatcaca 124
|| |||||||||||||||||||||| ||||||||||||| |||||||||||||| |||
Sbjct: 246 ctcatactcggcatcccctccttcgctgggccagccattgcaccaggccacatgataaca 305
Query: 125 ttctggctctggattatactccgtcaggtggaggctatcgagacacatagcggctttgat 184
|||||||||||||||||||| |||||| |||| || || || ||||| ||||| ||||||
Sbjct: 306 ttctggctctggattatacttcgtcagatggaagccattgatacacacagcggttttgat 365
Query: 185 ttcccattcaccccgacaaagtatattccattctatggaggagcagaataccatgactat 244
|||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 366 ttcccattcagcctgacaaagtatattccattctatggaggagcagaataccatgattat 425
Query: 245 catcattatgtaggaggccagagccaaagcaattttgcttctgttttcac 294
||||| || || |||||||| ||||| |||||||||||||| ||||||||
Sbjct: 426 catcactacgttggaggccaaagccagagcaattttgcttccgttttcac 475
>gb|AL811207.1|AL811207 AL811207 d:37 Triticum aestivum cDNA clone D10_d37_plate_2_run_2,
mRNA sequence
Length = 517
Score = 303 bits (153), Expect = 8e-081
Identities = 248/280 (88%)
Strand = Plus / Plus
Query: 92 gggccagccattgttccaggccacatgatcacattctggctctggattatactccgtcag 151
||||| ||||||| |||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 17 gggccggccattgcaccaggccacatgataacattctggctctggattatacttcgtcag 76
Query: 152 gtggaggctatcgagacacatagcggctttgatttcccattcaccccgacaaagtatatt 211
|||| || || || ||||| ||||| |||||||||||||||| || |||||||||||||
Sbjct: 77 atggaagccattgacacacacagcggttttgatttcccattcagcctgacaaagtatatt 136
Query: 212 ccattctatggaggagcagaataccatgactatcatcattatgtaggaggccagagccaa 271
||||||||||||||||||||||||||||| |||||||| || || |||||||| |||||
Sbjct: 137 ccattctatggaggagcagaataccatgattatcatcactacgttggaggccaaagccag 196
Query: 272 agcaattttgcttctgttttcacttactgtgattacttatatggcactgacaaaggttac 331
|||||||||||||| |||||||| |||||||||||| ||||||| || |||| |||||||
Sbjct: 197 agcaattttgcttccgttttcacgtactgtgattacctatatgggaccgacagaggttac 256
Query: 332 agattccacaaaacatacctagcaaagctgaaggatctgg 371
||||||||||| | ||| ||||| || ||||||||||||
Sbjct: 257 agattccacaaggcttacttagcanagttgaaggatctgg 296
>gb|CV522228.1|CV522228 RH-453 Triticum aestivum subtracted, clontech Triticum aestivum
cDNA, mRNA sequence
Length = 493
Score = 299 bits (151), Expect = 1e-079
Identities = 255/290 (87%)
Strand = Plus / Plus
Query: 5 caccatgagttcactgcgccaataggattcgcagctccatatgcacactgggctgaggtg 64
|||||||||| ||| ||||| || || || || || ||||| ||||||||||| |||||
Sbjct: 186 caccatgagtacaccgcgcccattggctttgccgcgccatacgcacactgggcagaggtt 245
Query: 65 ctgatactcggcatcccctccttcgtcgggccagccattgttccaggccacatgatcaca 124
|| |||||||||||||||||||||| ||||||||||||| |||||||||||||| |||
Sbjct: 246 ctcatactcggcatcccctccttcgctgggccagccattgcaccaggccacatgataaca 305
Query: 125 ttctggctctggattatactccgtcaggtggaggctatcgagacacatagcggctttgat 184
|||||||||||||||||||| |||||| |||| || || || ||||| ||||| ||||||
Sbjct: 306 ttctggctctggattatacttcgtcagatggaagccattgatacacacagcggttttgat 365
Query: 185 ttcccattcaccccgacaaagtatattccattctatggaggagcagaataccatgactat 244
|||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 366 ttcccattcagcctgacaaagtatattccattctatggaggagcagaataccatgattat 425
Query: 245 catcattatgtaggaggccagagccaaagcaattttgcttctgttttcac 294
||||| || || ||||| || ||||| |||||||||||||| ||||||||
Sbjct: 426 catcactacgttggaggncaaagccagagcaattttgcttccgttttcac 475
>gb|CV522230.1|CV522230 RH-529 Triticum aestivum subtracted, clontech Triticum aestivum
cDNA, mRNA sequence
Length = 490
Score = 272 bits (137), Expect = 3e-071
Identities = 239/273 (87%)
Strand = Plus / Plus
Query: 5 caccatgagttcactgcgccaataggattcgcagctccatatgcacactgggctgaggtg 64
|||||||||| ||| ||||| || || || || || ||||| ||||||||||| |||||
Sbjct: 186 caccatgagtacaccgcgcccattggctttgccgcgccatacgcacactgggcagaggtt 245
Query: 65 ctgatactcggcatcccctccttcgtcgggccagccattgttccaggccacatgatcaca 124
|| |||||||||||||||||||||| ||||||||||||| |||||||||||||| |||
Sbjct: 246 ctcatactcggcatcccctccttcgctgggccagccattgcaccaggccacatgataaca 305
Query: 125 ttctggctctggattatactccgtcaggtggaggctatcgagacacatagcggctttgat 184
|||||||||||||||||||| |||||| |||| || || || |||| ||||| ||||||
Sbjct: 306 ttctggctctggattatacttcgtcagatggaagccattgatacacgcagcggttttgat 365
Query: 185 ttcccattcaccccgacaaagtatattccattctatggaggagcagaataccatgactat 244
|||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 366 ttcccattcagcctgacaaagtatattccattctatggaggagcagaataccatgattat 425
Query: 245 catcattatgtaggaggccagagccaaagcaat 277
||||| || || |||||||| ||||| ||||||
Sbjct: 426 catcactacgttggaggccaaagccagagcaat 458
>gb|CD867159.1|CD867159 AZO2.105I06F001123 AZO2 Triticum aestivum cDNA clone AZO2105I06,
mRNA sequence
Length = 486
Score = 264 bits (133), Expect = 7e-069
Identities = 211/237 (89%)
Strand = Plus / Plus
Query: 135 ggattatactccgtcaggtggaggctatcgagacacatagcggctttgatttcccattca 194
|||||||||| |||||| |||| || || || ||||| ||||| ||||||||||||||||
Sbjct: 1 ggattatacttcgtcagatggaagccattgatacacacagcggttttgatttcccattca 60
Query: 195 ccccgacaaagtatattccattctatggaggagcagaataccatgactatcatcattatg 254
|| |||||||||||||||||||||||||||||||||||||||||| |||||||| || |
Sbjct: 61 gcctgacaaagtatattccattctatggaggagcagaataccatgattatcatcactacg 120
Query: 255 taggaggccagagccaaagcaattttgcttctgttttcacttactgtgattacttatatg 314
| |||||||| ||||| |||||||||||||| |||||||| |||||||||||| ||||||
Sbjct: 121 ttggaggccaaagccagagcaattttgcttccgttttcacgtactgtgattacctatatg 180
Query: 315 gcactgacaaaggttacagattccacaaaacatacctagcaaagctgaaggatctgg 371
| || |||| ||||||||||||||||||| | ||| |||||||| ||||||||||||
Sbjct: 181 ggaccgacagaggttacagattccacaaagcttacttagcaaagttgaaggatctgg 237
>gb|CA615643.1|CA615643 wr1.pk170.g10 wr1 Triticum aestivum cDNA clone wr1.pk170.g10 5'
end, mRNA sequence
Length = 493
Score = 172 bits (87), Expect = 2e-041
Identities = 189/222 (85%), Gaps = 1/222 (0%)
Strand = Plus / Plus
Query: 5 caccatgagttcactgcgccaataggattcgcagctccatatgcacactgggctgaggtg 64
|||||||||| ||| ||||| || || || || || ||||| ||||| ||||| |||||
Sbjct: 5 caccatgagtacaccgcgcccattggctttgccgcgccatacgcacattgggcaaaggtg 64
Query: 65 ctgatactcggcatcccctccttcgtcgggccagccattgttccaggccacatgatcaca 124
|| ||||| || ||||||||||||| ||||| ||||||| |||||||||||||| |||
Sbjct: 65 ctcatacttggnatcccctccttcgctgggccggccattgcaccaggccacatgataaca 124
Query: 125 ttctggctctggattatactccgtcaggtggaggctatcgagacacatagcggctttgat 184
|||||||||||||||||||| |||||| |||| || || || ||||| ||||| ||||||
Sbjct: 125 ttctggctctggattatacttcgtcagatggaagccattgatacacacagcggttttgat 184
Query: 185 ttcccattc-accccgacaaagtatattccattctatggagg 225
||||||||| | || ||| |||||||||||||||||||||||
Sbjct: 185 ttcccattcaagcctgacgaagtatattccattctatggagg 226
>gb|CD872782.1|CD872782 AZO2.121I12F010209 AZO2 Triticum aestivum cDNA clone AZO2121I12,
mRNA sequence
Length = 710
Score = 151 bits (76), Expect = 7e-035
Identities = 133/152 (87%)
Strand = Plus / Plus
Query: 5 caccatgagttcactgcgccaataggattcgcagctccatatgcacactgggctgaggtg 64
|||||||||| ||| ||||| || || || ||||| ||||| ||||||||||| ||||||
Sbjct: 546 caccatgagtacaccgcgcccattggctttgcagcgccatacgcacactgggcagaggtg 605
Query: 65 ctgatactcggcatcccctccttcgtcgggccagccattgttccaggccacatgatcaca 124
|| ||||| |||||||||||||||| ||||| ||||||| |||||||||||||| |||
Sbjct: 606 ctcatacttggcatcccctccttcgctgggccggccattgcaccaggccacatgataaca 665
Query: 125 ttctggctctggattatactccgtcaggtgga 156
|||||||||||||||||||| |||||| ||||
Sbjct: 666 ttctggctctggattatacttcgtcagatgga 697
>gb|CA659240.1|CA659240 wlm1.pk0001.c11 wlm1 Triticum aestivum cDNA clone wlm1.pk0001.c11
5' end, mRNA sequence
Length = 245
Score = 121 bits (61), Expect = 7e-026
Identities = 100/113 (88%)
Strand = Plus / Plus
Query: 259 aggccagagccaaagcaattttgcttctgttttcacttactgtgattacttatatggcac 318
|||||| ||||| |||||||||||||| |||||||| |||||||||||| ||||||| ||
Sbjct: 1 aggccaaagccagagcaattttgcttccgttttcacgtactgtgattacctatatgggac 60
Query: 319 tgacaaaggttacagattccacaaaacatacctagcaaagctgaaggatctgg 371
|||| |||||||||||||||||| | ||| |||||||| ||||||||||||
Sbjct: 61 cgacagaggttacagattccacaaggcttacttagcaaagttgaaggatctgg 113
>gb|CD889117.1|CD889117 G118.111A06F010720 G118 Triticum aestivum cDNA clone G118111A06,
mRNA sequence
Length = 358
Score = 117 bits (59), Expect = 1e-024
Identities = 95/107 (88%)
Strand = Plus / Plus
Query: 265 gagccaaagcaattttgcttctgttttcacttactgtgattacttatatggcactgacaa 324
|||||| |||||||||||||| |||||||| |||||||||||| ||||||| || ||||
Sbjct: 11 gagccagagcaattttgcttccgttttcacgtactgtgattacctatatgggaccgacag 70
Query: 325 aggttacagattccacaaaacatacctagcaaagctgaaggatctgg 371
|||||||||||||||||| | ||| |||||||| ||||||||||||
Sbjct: 71 aggttacagattccacaaggcttacttagcaaagttgaaggatctgg 117
>gb|BG905419.1|BG905419 TaLr1139F03F TaLr1 Triticum aestivum cDNA clone TaLr1139F03 3',
mRNA sequence
Length = 693
Score = 79.8 bits (40), Expect = 2e-013
Identities = 88/104 (84%)
Strand = Plus / Minus
Query: 203 aagtatattccattctatggaggagcagaataccatgactatcatcattatgtaggaggc 262
|||||||| || ||||||||||| ||||| |||||||||| ||||| || |||||||
Sbjct: 666 aagtatataccgttctatggaggggcagagcaccatgactaccatcactacataggagga 607
Query: 263 cagagccaaagcaattttgcttctgttttcacttactgtgatta 306
|||||| | ||||| || ||| |||||||||| |||||||||||
Sbjct: 606 cagagcaagagcaacttcgctcctgttttcacctactgtgatta 563
>gb|DR739905.1|DR739905 FGAS000172 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1160
Score = 69.9 bits (35), Expect = 2e-010
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 203 aagtatattccattctatggaggagcagaataccatgactatcatcattatgtaggaggc 262
|||||||| || ||||||||||| ||||| |||||||||| ||||| || |||||||
Sbjct: 863 aagtatataccgttctatggaggggcagagcaccatgactaccatcactacataggagga 922
Query: 263 cagagccaaagcaattttgcttctgttttcacttactgtgat 304
|||| || ||||| || ||| |||||||||| |||||||||
Sbjct: 923 cagangcagagcaacttcgctcctgttttcacctactgtgat 964
>gb|AL821565.1|AL821565 AL821565 p:133 Triticum aestivum cDNA clone B08_p133_plate_14, mRNA
sequence
Length = 542
Score = 63.9 bits (32), Expect = 1e-008
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 203 aagtatattccattctatggaggagcagaataccatgactatcatcattatgtaggaggc 262
|||||||| || ||||||||||| || || |||||||||| ||||| || ||||| |
Sbjct: 269 aagtatataccgttctatggaggggcggagcaccatgactaccatcactacataggatga 328
Query: 263 cagagccaaagcaattttgcttctgttttcacttactgtgatta 306
|||||| | ||||| || ||| |||||||||| |||||||||||
Sbjct: 329 cagagcaagagcaacttcgctcctgttttcacctactgtgatta 372
>gb|CA605590.1|CA605590 wr1.pk0055.h7 wr1 Triticum aestivum cDNA clone wr1.pk0055.h7 5'
end, mRNA sequence
Length = 595
Score = 58.0 bits (29), Expect = 8e-007
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 287 gttttcacttactgtgattacttatatggcactgacaaaggttacagattccacaa 342
|||||||| |||||||||||| ||||||| | ||| ||||||||||||||||||
Sbjct: 426 gttttcacgtactgtgattacntatatggggccgacggaggttacagattccacaa 371
>gb|CA622828.1|CA622828 wl1n.pk0099.f8 wl1n Triticum aestivum cDNA clone wl1n.pk0099.f8 5'
end, mRNA sequence
Length = 364
Score = 52.0 bits (26), Expect = 5e-005
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 330 acagattccacaaaacatacctagcaaagctgaaggatctgg 371
|||||||||||||| | ||| |||||||| ||||||||||||
Sbjct: 1 acagattccacaaagcttacttagcaaagttgaaggatctgg 42
>gb|BG905582.1|BG905582 TaLr1140G04F TaLr1 Triticum aestivum cDNA clone TaLr1140G04 3',
mRNA sequence
Length = 600
Score = 50.1 bits (25), Expect = 2e-004
Identities = 67/81 (82%)
Strand = Plus / Minus
Query: 255 taggaggccagagccaaagcaattttgcttctgttttcacttactgtgattacttatatg 314
||||||| |||||| | ||||| || ||| |||||||||| ||||||||||| | ||||
Sbjct: 591 taggaggacagagcaagagcaacttcgctcctgttttcacctactgtgattatatttatg 532
Query: 315 gcactgacaaaggttacagat 335
| || ||||| || |||||||
Sbjct: 531 gaacggacaagggctacagat 511
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 94,945
Number of Sequences: 636343
Number of extensions: 94945
Number of successful extensions: 22767
Number of sequences better than 0.5: 19
Number of HSP's better than 0.5 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 22734
Number of HSP's gapped (non-prelim): 29
length of query: 682
length of database: 367,240,239
effective HSP length: 19
effective length of query: 663
effective length of database: 355,149,722
effective search space: 235464265686
effective search space used: 235464265686
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)