BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440444.2.1
(237 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ242481.1|BQ242481 TaE15027H01F TaE15 Triticum aestivum... 115 1e-024
gb|CD897335.1|CD897335 G174.105I15F010823 G174 Triticum aes... 115 1e-024
gb|BQ237218.1|BQ237218 TaE05020B10F TaE05 Triticum aestivum... 107 3e-022
gb|BQ620594.1|BQ620594 TaLr1140E01R TaLr1 Triticum aestivum... 107 3e-022
gb|CD873915.1|CD873915 AZO3.100P16R011123 AZO3 Triticum aes... 107 3e-022
gb|BQ238373.1|BQ238373 TaE05005A02F TaE05 Triticum aestivum... 100 8e-020
gb|CA638926.1|CA638926 wre1n.pk0018.f12 wre1n Triticum aest... 100 8e-020
gb|CD454334.1|CD454334 WHE1795_G03_M05ZT CS wheat pre-anthe... 100 8e-020
gb|CK207648.1|CK207648 FGAS019296 Triticum aestivum FGAS: L... 100 8e-020
gb|CD931958.1|CD931958 GR45.116D11F010420 GR45 Triticum aes... 98 3e-019
gb|CK210535.1|CK210535 FGAS022356 Triticum aestivum FGAS: L... 96 1e-018
gb|CA707835.1|CA707835 wdk2c.pk007.h20 wdk2c Triticum aesti... 80 7e-014
gb|BQ242692.1|BQ242692 TaE15024F04F TaE15 Triticum aestivum... 76 1e-012
gb|CD895472.1|CD895472 G174.001O19R011120 G174 Triticum aes... 76 1e-012
gb|CK152584.1|CK152584 FGAS035656 Triticum aestivum FGAS: T... 68 3e-010
gb|AL809843.1|AL809843 AL809843 d:15 Triticum aestivum cDNA... 66 1e-009
gb|BE430865.1|BE430865 SUN006.F08F991220 ITEC SUN Wheat cDN... 56 1e-006
gb|BQ245437.1|BQ245437 TaE15024F04R TaE15 Triticum aestivum... 52 2e-005
gb|CA625342.1|CA625342 wl1n.pk0132.a5 wl1n Triticum aestivu... 50 7e-005
gb|CA635584.1|CA635584 wle1n.pk0102.a11 wle1n Triticum aest... 44 0.004
gb|CA710522.1|CA710522 wdk2c.pk017.g7 wdk2c Triticum aestiv... 44 0.004
gb|BE431142.1|BE431142 SUN011.H02F991223 ITEC SUN Wheat cDN... 42 0.016
>gb|BQ242481.1|BQ242481 TaE15027H01F TaE15 Triticum aestivum cDNA clone TaE15027H01F, mRNA
sequence
Length = 525
Score = 115 bits (58), Expect = 1e-024
Identities = 145/174 (83%)
Strand = Plus / Plus
Query: 2 ctcaaacctaatctccatctcatggttgtcaaccatgaagaaatgagacccaatatcgat 61
||||||| |||||||||||||||| ||||||||||||| ||||||| | || | || |
Sbjct: 124 ctcaaacgtaatctccatctcatgcttgtcaaccatgaggaaatgaaatcctttgtctac 183
Query: 62 caccttcctgccatccgccctcaccctggagaaatgcttacacgggctgatgtcaaacct 121
|||||| ||||||||| |||||||||| ||||| | |||||||||||| ||||| |
Sbjct: 184 caccttgctgccatccttcctcaccctgctaaaatgttcacacgggctgatatcaaatgt 243
Query: 122 gagcttagccgtctcccctgccttgagatgctggctcctgaacccaatcagctg 175
||| | ||| |||||||||||||||| ||||| ||||||||||| || |||||
Sbjct: 244 gagtctggccttctcccctgccttgaggtgctgtctcctgaacccgatgagctg 297
>gb|CD897335.1|CD897335 G174.105I15F010823 G174 Triticum aestivum cDNA clone G174105I15,
mRNA sequence
Length = 515
Score = 115 bits (58), Expect = 1e-024
Identities = 139/166 (83%)
Strand = Plus / Minus
Query: 10 taatctccatctcatggttgtcaaccatgaagaaatgagacccaatatcgatcaccttcc 69
|||||||||||||||| ||||||||||||| ||||||||| || | || | |||||| |
Sbjct: 438 taatctccatctcatgcttgtcaaccatgaggaaatgagatcctctgtctaccaccttgc 379
Query: 70 tgccatccgccctcaccctggagaaatgcttacacgggctgatgtcaaacctgagcttag 129
|||||||| |||||||||| ||||| | |||||||||||| ||||| |||| | |
Sbjct: 378 tgccatccttcctcaccctgctaaaatgttcacacgggctgatatcaaatgtgagtctgg 319
Query: 130 ccgtctcccctgccttgagatgctggctcctgaacccaatcagctg 175
|| |||||||||||||||| ||||| ||||||||||| || |||||
Sbjct: 318 ccttctcccctgccttgaggtgctgtctcctgaacccgatgagctg 273
>gb|BQ237218.1|BQ237218 TaE05020B10F TaE05 Triticum aestivum cDNA clone TaE05020B10F, mRNA
sequence
Length = 509
Score = 107 bits (54), Expect = 3e-022
Identities = 150/182 (82%)
Strand = Plus / Plus
Query: 56 atcgatcaccttcctgccatccgccctcaccctggagaaatgcttacacgggctgatgtc 115
||||||||||||| |||||||| ||||| ||||| ||| |||| |||||||||| |||
Sbjct: 315 atcgatcaccttcttgccatcctccctcgccctgctgaagtgctcgcacgggctgacgtc 374
Query: 116 aaacctgagcttagccgtctcccctgccttgagatgctggctcctgaacccaatcagctg 175
|||||||| | ||| |||| || ||||||||||||||| | | |||||||||||||||
Sbjct: 375 gaacctgaggctggccttctcgccggccttgagatgctgggttcggaacccaatcagctg 434
Query: 176 gcttgccgggcgaccttgtttcgtgtttggccagcggaggaacatgagcaccgagtgctt 235
||| |||| || || ||| ||| ||||| ||||||||||| ||||||||||||||
Sbjct: 435 gctcaccggacgcccacccgtcgcgttgggccaccggaggaacattagcaccgagtgctt 494
Query: 236 cc 237
||
Sbjct: 495 cc 496
>gb|BQ620594.1|BQ620594 TaLr1140E01R TaLr1 Triticum aestivum cDNA clone TaLr1140E01R, mRNA
sequence
Length = 586
Score = 107 bits (54), Expect = 3e-022
Identities = 150/182 (82%)
Strand = Plus / Plus
Query: 56 atcgatcaccttcctgccatccgccctcaccctggagaaatgcttacacgggctgatgtc 115
||||||||||||| |||||||| ||||| ||||| ||| |||| |||||||||| |||
Sbjct: 152 atcgatcaccttcttgccatcctccctcgccctgctgaagtgctcgcacgggctgacgtc 211
Query: 116 aaacctgagcttagccgtctcccctgccttgagatgctggctcctgaacccaatcagctg 175
|||||||| | ||| |||| || ||||||||||||||| | | |||||||||||||||
Sbjct: 212 gaacctgaggctggccttctcgccggccttgagatgctgggttcggaacccaatcagctg 271
Query: 176 gcttgccgggcgaccttgtttcgtgtttggccagcggaggaacatgagcaccgagtgctt 235
||| |||| || || ||| ||| ||||| ||||||||||| ||||||||||||||
Sbjct: 272 gctcaccggacgcccacccgtcgcgttgggccaccggaggaacattagcaccgagtgctt 331
Query: 236 cc 237
||
Sbjct: 332 cc 333
>gb|CD873915.1|CD873915 AZO3.100P16R011123 AZO3 Triticum aestivum cDNA clone AZO3100P16,
mRNA sequence
Length = 705
Score = 107 bits (54), Expect = 3e-022
Identities = 150/182 (82%)
Strand = Plus / Plus
Query: 56 atcgatcaccttcctgccatccgccctcaccctggagaaatgcttacacgggctgatgtc 115
||||||||||||| |||||||| ||||| ||||| ||| |||| |||||||||| |||
Sbjct: 295 atcgatcaccttcttgccatcctccctcgccctgctgaagtgctcgcacgggctgacgtc 354
Query: 116 aaacctgagcttagccgtctcccctgccttgagatgctggctcctgaacccaatcagctg 175
|||||||| | ||| |||| || ||||||||||||||| | | |||||||||||||||
Sbjct: 355 gaacctgaggctggccttctcgccggccttgagatgctgggttcggaacccaatcagctg 414
Query: 176 gcttgccgggcgaccttgtttcgtgtttggccagcggaggaacatgagcaccgagtgctt 235
||| |||| || || ||| ||| ||||| ||||||||||| ||||||||||||||
Sbjct: 415 gctcaccggacgcccacccgtcgcgttgggccaccggaggaacattagcaccgagtgctt 474
Query: 236 cc 237
||
Sbjct: 475 cc 476
>gb|BQ238373.1|BQ238373 TaE05005A02F TaE05 Triticum aestivum cDNA clone TaE05005A02F, mRNA
sequence
Length = 620
Score = 99.6 bits (50), Expect = 8e-020
Identities = 149/182 (81%)
Strand = Plus / Plus
Query: 56 atcgatcaccttcctgccatccgccctcaccctggagaaatgcttacacgggctgatgtc 115
||||||||||||| |||||||| ||||| ||||| ||| |||| |||||||||| |||
Sbjct: 271 atcgatcaccttcttgccatcctccctcgccctgctgaagtgctcgcacgggctgacgtc 330
Query: 116 aaacctgagcttagccgtctcccctgccttgagatgctggctcctgaacccaatcagctg 175
|||||||| | ||| |||| || ||||||||||| ||| | | |||||||||||||||
Sbjct: 331 gaacctgaggctggccttctcgccggccttgagatgatgggttcggaacccaatcagctg 390
Query: 176 gcttgccgggcgaccttgtttcgtgtttggccagcggaggaacatgagcaccgagtgctt 235
||| |||| || || ||| ||| ||||| ||||||||||| ||||||||||||||
Sbjct: 391 gctcaccggacgcccacccgtcgcgttgggccaccggaggaacatcagcaccgagtgctt 450
Query: 236 cc 237
||
Sbjct: 451 cc 452
>gb|CA638926.1|CA638926 wre1n.pk0018.f12 wre1n Triticum aestivum cDNA clone
wre1n.pk0018.f12 5' end, mRNA sequence
Length = 522
Score = 99.6 bits (50), Expect = 8e-020
Identities = 149/182 (81%)
Strand = Plus / Minus
Query: 56 atcgatcaccttcctgccatccgccctcaccctggagaaatgcttacacgggctgatgtc 115
||||||||||||| |||||||| ||||| ||||| ||| |||| |||||||||| |||
Sbjct: 206 atcgatcaccttcttgccatcctccctcgccctgctgaagtgctcgcacgggctgacgtc 147
Query: 116 aaacctgagcttagccgtctcccctgccttgagatgctggctcctgaacccaatcagctg 175
|||||||| | ||| |||| || ||||||||||| ||| | | |||||||||||||||
Sbjct: 146 gaacctgaggctggccttctcgccggccttgagatgatgggttcggaacccaatcagctg 87
Query: 176 gcttgccgggcgaccttgtttcgtgtttggccagcggaggaacatgagcaccgagtgctt 235
||| |||| || || ||| ||| ||||| ||||||||||| ||||||||||||||
Sbjct: 86 gctcaccggacgcccacccgtcgcgttgggccaccggaggaacatcagcaccgagtgctt 27
Query: 236 cc 237
||
Sbjct: 26 cc 25
>gb|CD454334.1|CD454334 WHE1795_G03_M05ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1795_G03_M05, mRNA sequence
Length = 681
Score = 99.6 bits (50), Expect = 8e-020
Identities = 149/182 (81%)
Strand = Plus / Plus
Query: 56 atcgatcaccttcctgccatccgccctcaccctggagaaatgcttacacgggctgatgtc 115
||||||||||||| |||||||| ||||| ||||| ||| |||| |||||||||| |||
Sbjct: 281 atcgatcaccttcttgccatcctccctcgccctgctgaagtgctcgcacgggctgacgtc 340
Query: 116 aaacctgagcttagccgtctcccctgccttgagatgctggctcctgaacccaatcagctg 175
|||||||| | ||| |||| || ||||||||||| ||| | | |||||||||||||||
Sbjct: 341 gaacctgaggctggccttctcgccggccttgagatgatgggttcggaacccaatcagctg 400
Query: 176 gcttgccgggcgaccttgtttcgtgtttggccagcggaggaacatgagcaccgagtgctt 235
||| |||| || || ||| ||| ||||| ||||||||||| ||||||||||||||
Sbjct: 401 gctcaccggacgcccacccgtcgcgttgggccaccggaggaacatcagcaccgagtgctt 460
Query: 236 cc 237
||
Sbjct: 461 cc 462
>gb|CK207648.1|CK207648 FGAS019296 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1114
Score = 99.6 bits (50), Expect = 8e-020
Identities = 149/182 (81%)
Strand = Plus / Plus
Query: 56 atcgatcaccttcctgccatccgccctcaccctggagaaatgcttacacgggctgatgtc 115
||||||||||||| |||||||| ||||| ||||| ||| |||| |||||||||| |||
Sbjct: 353 atcgatcaccttcttgccatcctccctcgccctgctgaagtgctcgcacgggctgacgtc 412
Query: 116 aaacctgagcttagccgtctcccctgccttgagatgctggctcctgaacccaatcagctg 175
|||||||| | ||| |||| || ||||||||||| ||| | | |||||||||||||||
Sbjct: 413 gaacctgaggctggccttctcgccggccttgagatgatgggttcggaacccaatcagctg 472
Query: 176 gcttgccgggcgaccttgtttcgtgtttggccagcggaggaacatgagcaccgagtgctt 235
||| |||| || || ||| ||| ||||| ||||||||||| ||||||||||||||
Sbjct: 473 gctcaccggacgcccacccgtcgcgttgggccaccggaggaacatcagcaccgagtgctt 532
Query: 236 cc 237
||
Sbjct: 533 cc 534
>gb|CD931958.1|CD931958 GR45.116D11F010420 GR45 Triticum aestivum cDNA clone GR45116D11,
mRNA sequence
Length = 342
Score = 97.6 bits (49), Expect = 3e-019
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 10 taatctccatctcatggttgtcaaccatgaagaaatgagacccaatatcgatcaccttcc 69
|||||||||||||||| ||||||||||||| |||||||||||| | || | ||||||
Sbjct: 134 taatctccatctcatgcttgtcaaccatgaggaaatgagaccctctgtctaccaccttgt 75
Query: 70 tgccatccgccctcaccctggagaaatgcttacacgggctgatgtcaaa 118
|||||||| |||||||||| ||||||| ||||||||||||||||||
Sbjct: 74 tgccatccttcctcaccctgctaaaatgctcacacgggctgatgtcaaa 26
>gb|CK210535.1|CK210535 FGAS022356 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1092
Score = 95.6 bits (48), Expect = 1e-018
Identities = 144/176 (81%)
Strand = Plus / Minus
Query: 56 atcgatcaccttcctgccatccgccctcaccctggagaaatgcttacacgggctgatgtc 115
||||||||||||| |||||||| ||||| ||||| ||| |||| |||||||||| |||
Sbjct: 210 atcgatcaccttcttgccatcctccctcgccctgctgaagtgctcgcacgggctgacgtc 151
Query: 116 aaacctgagcttagccgtctcccctgccttgagatgctggctcctgaacccaatcagctg 175
|||||||| | ||| |||| || ||||||||||||||| | | |||||||||||||||
Sbjct: 150 gaacctgaggctggccttctcgccggccttgagatgctgggttcggaacccaatcagctg 91
Query: 176 gcttgccgggcgaccttgtttcgtgtttggccagcggaggaacatgagcaccgagt 231
||| |||| || || ||| ||| ||||| ||||||||||| ||||||||||
Sbjct: 90 gctcaccggacgcccacccgtcgcgttgggccaccggaggaacattagcaccgagt 35
>gb|CA707835.1|CA707835 wdk2c.pk007.h20 wdk2c Triticum aestivum cDNA clone wdk2c.pk007.h20
5' end, mRNA sequence
Length = 478
Score = 79.8 bits (40), Expect = 7e-014
Identities = 97/116 (83%)
Strand = Plus / Plus
Query: 56 atcgatcaccttcctgccatccgccctcaccctggagaaatgcttacacgggctgatgtc 115
||||||||||||| |||||||| ||||| ||||| ||| |||| |||||||||| |||
Sbjct: 292 atcgatcaccttcttgccatcctccctcgccctgctgaagtgctcgcacgggctgacgtc 351
Query: 116 aaacctgagcttagccgtctcccctgccttgagatgctggctcctgaacccaatca 171
|||||||| | ||| |||| || ||||||||||||||| | | |||||||||||
Sbjct: 352 gaacctgaggctggccttctcgccggccttgagatgctgggttcggaacccaatca 407
>gb|BQ242692.1|BQ242692 TaE15024F04F TaE15 Triticum aestivum cDNA clone TaE15024F04F, mRNA
sequence
Length = 586
Score = 75.8 bits (38), Expect = 1e-012
Identities = 146/182 (80%)
Strand = Plus / Plus
Query: 56 atcgatcaccttcctgccatccgccctcaccctggagaaatgcttacacgggctgatgtc 115
||||||||||||| ||||||| ||||| ||||| ||| |||| |||||||||| |||
Sbjct: 237 atcgatcaccttctggccatcctccctcgccctgctgaagtgctcgcacgggctgacgtc 296
Query: 116 aaacctgagcttagccgtctcccctgccttgagatgctggctcctgaacccaatcagctg 175
|||||||| | ||| |||| || ||||||| ||||||| | | ||| || ||||||||
Sbjct: 297 gaacctgaggctggccttctcgccggccttgatatgctgggttcggaatcccatcagctg 356
Query: 176 gcttgccgggcgaccttgtttcgtgtttggccagcggaggaacatgagcaccgagtgctt 235
||| |||| || || ||| ||| ||||| ||||||||||| ||||||||||||||
Sbjct: 357 gctcaccggacgcccacccgtcgcgttgggccaccggaggaacatcagcaccgagtgctt 416
Query: 236 cc 237
||
Sbjct: 417 cc 418
>gb|CD895472.1|CD895472 G174.001O19R011120 G174 Triticum aestivum cDNA clone G174001O19,
mRNA sequence
Length = 654
Score = 75.8 bits (38), Expect = 1e-012
Identities = 146/182 (80%)
Strand = Plus / Plus
Query: 56 atcgatcaccttcctgccatccgccctcaccctggagaaatgcttacacgggctgatgtc 115
||||||||||||| ||||||| ||||| ||||| ||| |||| |||||||||| |||
Sbjct: 234 atcgatcaccttctggccatcctccctcgccctgctgaagtgctcgcacgggctgacgtc 293
Query: 116 aaacctgagcttagccgtctcccctgccttgagatgctggctcctgaacccaatcagctg 175
|||||||| | ||| |||| || ||||||| ||||||| | | ||| || ||||||||
Sbjct: 294 gaacctgaggctggccttctcgccggccttgatatgctgggttcggaatcccatcagctg 353
Query: 176 gcttgccgggcgaccttgtttcgtgtttggccagcggaggaacatgagcaccgagtgctt 235
||| |||| || || ||| ||| ||||| ||||||||||| ||||||||||||||
Sbjct: 354 gctcaccggacgcccacccgtcgcgttgggccaccggaggaacatcagcaccgagtgctt 413
Query: 236 cc 237
||
Sbjct: 414 cc 415
>gb|CK152584.1|CK152584 FGAS035656 Triticum aestivum FGAS: TaLt3 Triticum aestivum cDNA,
mRNA sequence
Length = 876
Score = 67.9 bits (34), Expect = 3e-010
Identities = 145/182 (79%)
Strand = Plus / Plus
Query: 56 atcgatcaccttcctgccatccgccctcaccctggagaaatgcttacacgggctgatgtc 115
||||||||||||| ||||||| ||||| ||||| ||| |||| |||||||||| |||
Sbjct: 415 atcgatcaccttctggccatcctccctcgccctgctgaagtgctcgcacgggctgacgtc 474
Query: 116 aaacctgagcttagccgtctcccctgccttgagatgctggctcctgaacccaatcagctg 175
|||||||| | ||| |||| || ||||||| ||||||| | | ||| || ||||||||
Sbjct: 475 gaacctgaggctggccttctcgccggccttgatatgctgggttcggaatcccatcagctg 534
Query: 176 gcttgccgggcgaccttgtttcgtgtttggccagcggaggaacatgagcaccgagtgctt 235
||| |||| || || || ||| ||||| ||||||||||| ||||||||||||||
Sbjct: 535 gctcaccggacgcccacccgtctcgttgggccaccggaggaacatcagcaccgagtgctt 594
Query: 236 cc 237
||
Sbjct: 595 cc 596
>gb|AL809843.1|AL809843 AL809843 d:15 Triticum aestivum cDNA clone A10_d15_plate_2, mRNA
sequence
Length = 555
Score = 65.9 bits (33), Expect = 1e-009
Identities = 90/109 (82%)
Strand = Plus / Minus
Query: 127 tagccgtctcccctgccttgagatgctggctcctgaacccaatcagctggcttgccgggc 186
||||| |||| || |||| ||| |||||||||| |||||| | ||||||||| |||||||
Sbjct: 184 tagccttctcgccggcctcgaggtgctggctccggaacccgaccagctggctcgccgggc 125
Query: 187 gaccttgtttcgtgtttggccagcggaggaacatgagcaccgagtgctt 235
| || ||| ||| ||||| ||||||||||| ||||||||||||||
Sbjct: 124 gcccacccgtcgcgttgggccaccggaggaacatcagcaccgagtgctt 76
>gb|BE430865.1|BE430865 SUN006.F08F991220 ITEC SUN Wheat cDNA Library Triticum aestivum
cDNA clone SUN006.F08, mRNA sequence
Length = 695
Score = 56.0 bits (28), Expect = 1e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 202 ttggccagcggaggaacatgagcaccgagtgcttcc 237
||||||| ||||||||||| ||||||||||||||||
Sbjct: 642 ttggccaccggaggaacatcagcaccgagtgcttcc 607
>gb|BQ245437.1|BQ245437 TaE15024F04R TaE15 Triticum aestivum cDNA clone TaE15024F04R, mRNA
sequence
Length = 545
Score = 52.0 bits (26), Expect = 2e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 204 ggccagcggaggaacatgagcaccgagtgcttcc 237
||||| ||||||||||| ||||||||||||||||
Sbjct: 469 ggccaccggaggaacatcagcaccgagtgcttcc 436
>gb|CA625342.1|CA625342 wl1n.pk0132.a5 wl1n Triticum aestivum cDNA clone wl1n.pk0132.a5 5'
end, mRNA sequence
Length = 321
Score = 50.1 bits (25), Expect = 7e-005
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 56 atcgatcaccttcctgccatccgccctcaccctggagaaatgcttacacgggctgatgtc 115
||||||||||||| ||||||| ||||| ||||| ||| |||| |||||||||| |||
Sbjct: 76 atcgatcaccttctggccatcctccctcgccctgctgaagtgctcgcacgggctgacgtc 17
Query: 116 aaacctgag 124
||||||||
Sbjct: 16 gaacctgag 8
>gb|CA635584.1|CA635584 wle1n.pk0102.a11 wle1n Triticum aestivum cDNA clone
wle1n.pk0102.a11 5' end, mRNA sequence
Length = 583
Score = 44.1 bits (22), Expect = 0.004
Identities = 58/69 (84%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 56 atcgatcaccttcctgccatccgccct-caccctggagaaatgcttacacgggctgatgt 114
||||||||||||| |||||||| |||| | ||||| ||| |||| |||||||||| ||
Sbjct: 337 atcgatcaccttcttgccatcctccctccgccctgctgaagtgctcgcacgggctgacgt 396
Query: 115 caaacctga 123
| |||||||
Sbjct: 397 cnaacctga 405
>gb|CA710522.1|CA710522 wdk2c.pk017.g7 wdk2c Triticum aestivum cDNA clone wdk2c.pk017.g7 5'
end, mRNA sequence
Length = 473
Score = 44.1 bits (22), Expect = 0.004
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 56 atcgatcaccttcctgccatccgccctcaccctg 89
||||||||||||| |||||||| ||||| |||||
Sbjct: 246 atcgatcaccttcttgccatcctccctcgccctg 279
>gb|BE431142.1|BE431142 SUN011.H02F991223 ITEC SUN Wheat cDNA Library Triticum aestivum
cDNA clone SUN011.H02, mRNA sequence
Length = 600
Score = 42.1 bits (21), Expect = 0.016
Identities = 67/81 (82%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 96 tgcttacacgggctgatgtcaaacctgagcttagccgtctcccctgccttgagatgctgg 155
|||| |||||||||||||||||| |||| | ||| |||| |||||||| || |||||
Sbjct: 577 tgctcacacgggctgatgtcaaatgtgagtctggccttctctcctgcctttaggtgctgt 518
Query: 156 ctc-ctgaacccaatcagctg 175
||| |||||||| || |||||
Sbjct: 517 ctcactgaacccgatgagctg 497
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 45,009
Number of Sequences: 636343
Number of extensions: 45009
Number of successful extensions: 12904
Number of sequences better than 0.5: 22
Number of HSP's better than 0.5 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12863
Number of HSP's gapped (non-prelim): 39
length of query: 237
length of database: 367,240,239
effective HSP length: 18
effective length of query: 219
effective length of database: 355,786,065
effective search space: 77917148235
effective search space used: 77917148235
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)