BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2430806.2.1
(1380 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA617131.1|CA617131 wl1n.pk0002.d8 wl1n Triticum aestivu... 813 0.0
gb|BJ279279.1|BJ279279 BJ279279 Y. Ogihara unpublished cDNA... 529 e-148
gb|CA619844.1|CA619844 wl1n.pk0061.a10 wl1n Triticum aestiv... 515 e-144
gb|BJ262652.1|BJ262652 BJ262652 Y. Ogihara unpublished cDNA... 454 e-126
gb|BQ608734.1|BQ608734 BRY_4645 wheat EST endosperm library... 357 1e-096
gb|BJ284330.1|BJ284330 BJ284330 Y. Ogihara unpublished cDNA... 331 8e-089
gb|BJ257082.1|BJ257082 BJ257082 Y. Ogihara unpublished cDNA... 325 5e-087
gb|CD920019.1|CD920019 G608.115I16F010911 G608 Triticum aes... 325 5e-087
gb|CA621143.1|CA621143 wl1n.pk0073.d11 wl1n Triticum aestiv... 264 1e-068
gb|AJ613824.1|AJ613824 AJ613824 Triticum turgidum subsp. du... 264 1e-068
gb|BQ239768.1|BQ239768 TaE05027A04R TaE05 Triticum aestivum... 234 1e-059
gb|CA483801.1|CA483801 WHE3205_D12_G23ZS Wheat meiotic anth... 234 1e-059
gb|CK169116.1|CK169116 FGAS043724 Triticum aestivum FGAS: T... 234 1e-059
gb|BQ236778.1|BQ236778 TaE05027A04F TaE05 Triticum aestivum... 218 8e-055
gb|BM136776.1|BM136776 WHE2617_C02_E03ZS Wheat Fusarium gra... 141 1e-031
gb|CA682278.1|CA682278 wlm24.pk0028.e3 wlm24 Triticum aesti... 133 4e-029
gb|BE400193.1|BE400193 AWB001.A07F000328 ITEC AWB Wheat Mei... 42 0.10
gb|BM136452.1|BM136452 WHE2610_F03_K06ZS Wheat Fusarium gra... 42 0.10
gb|BJ214492.1|BJ214492 BJ214492 Y. Ogihara unpublished cDNA... 42 0.10
gb|BJ290122.1|BJ290122 BJ290122 Y. Ogihara unpublished cDNA... 42 0.10
gb|CA599307.1|CA599307 waw1c.pk001.m9 waw1c Triticum aestiv... 42 0.10
gb|CA612112.1|CA612112 wr1.pk0140.g12 wr1 Triticum aestivum... 42 0.10
gb|CD373894.1|CD373894 WHE2610_F03_K06ZT Sumai3 Wheat Fusar... 42 0.10
gb|CK162977.1|CK162977 FGAS015588 Triticum aestivum FGAS: L... 42 0.10
gb|CK162978.1|CK162978 FGAS015589 Triticum aestivum FGAS: L... 42 0.10
gb|CA498406.1|CA498406 WHE3243_A03_B05ZT Wheat meiotic anth... 40 0.40
gb|CD878754.1|CD878754 AZO4.103I24F010929 AZO4 Triticum aes... 40 0.40
gb|AL813053.1|AL813053 AL813053 e:411 Triticum aestivum cDN... 40 0.40
>gb|CA617131.1|CA617131 wl1n.pk0002.d8 wl1n Triticum aestivum cDNA clone wl1n.pk0002.d8 5'
end, mRNA sequence
Length = 525
Score = 813 bits (410), Expect = 0.0
Identities = 424/426 (99%), Gaps = 2/426 (0%)
Strand = Plus / Plus
Query: 427 caaggccaagagcgaggggtacctgtgggggaacaggactgcagctgtggactccgacaa 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaggccaagagcgaggggtacctgtgggggaacaggactgcagctgtggactccgacaa 60
Query: 487 gaagcagcagcttcttgccgtcattggagtttacactgggtttggctcccgtctcaagag 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaagcagcagcttcttgccgtcattggagtttacactgggtttggctcccgtctcaagag 120
Query: 547 gaacgtcttccgtggctcctggatgccaagaggtgatgctctgaagaagcttgaggaaaa 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaacgtcttccgtggctcctggatgccaagaggtgatgctctgaagaagcttgaggaaaa 180
Query: 607 gggtgtagctattcgttttgttattggtcggagtgcaaatcgaggtgatagcttggaccg 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gggtgtagctattcgttttgttattggtcggagtgcaaatcgaggtgatagcttggaccg 240
Query: 667 taatattgatgatgaaaatcggcagacaaaggacttcttgattcttgaaagtcatgaaga 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taatattgatgatgaaaatcggcagacaaaggacttcttgattcttgaaagtcatgaaga 300
Query: 727 ggctgcagaagaattaccgagcaaagcaaaaattttcttcagtgctgcagttgaagcctg 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggctgcagaagaattaccgagcaaagcaaaaattttcttcagtgctgcagttgaagcctg 360
Query: 787 ggatgcagaattttatgtcaaagttgaagataacattaatcttgacttagctgggttaat 846
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 361 ggatgcagaattttatgtcaaagttgaagataacattaa-cttgacttagctggg-taat 418
Query: 847 tgagat 852
||||||
Sbjct: 419 tgagat 424
>gb|BJ279279.1|BJ279279 BJ279279 Y. Ogihara unpublished cDNA library, Wh_r Triticum aestivum
cDNA clone whr2c12 5', mRNA sequence
Length = 720
Score = 529 bits (267), Expect = e-148
Identities = 504/583 (86%)
Strand = Plus / Plus
Query: 500 cttgccgtcattggagtttacactgggtttggctcccgtctcaagaggaacgtcttccgt 559
||||| |||||||||||||||||||| ||||||||||| |||||||||||| |||||||
Sbjct: 138 cttgcggtcattggagtttacactggctttggctcccggctcaagaggaacaccttccgt 197
Query: 560 ggctcctggatgccaagaggtgatgctctgaagaagcttgaggaaaagggtgtagctatt 619
|||||||||||||| |||||||||||| | |||| |||||||||||||||||| | ||||
Sbjct: 198 ggctcctggatgcccagaggtgatgctttaaagacgcttgaggaaaagggtgtggttatt 257
Query: 620 cgttttgttattggtcggagtgcaaatcgaggtgatagcttggaccgtaatattgatgat 679
|||||||||||||| || ||| | |||||||||||||||||||||||||||||| ||||
Sbjct: 258 cgttttgttattggccgaagtcctaatcgaggtgatagcttggaccgtaatattaatgaa 317
Query: 680 gaaaatcggcagacaaaggacttcttgattcttgaaagtcatgaagaggctgcagaagaa 739
|| || | ||||||| || ||||||||||| |||||||| || ||||||||||| |||
Sbjct: 318 gagaacagaaagacaaacgatttcttgattctggaaagtcacgaggaggctgcagaggaa 377
Query: 740 ttaccgagcaaagcaaaaattttcttcagtgctgcagttgaagcctgggatgcagaattt 799
||||| | |||| || ||||||||||||| ||| | ||||| ||||||||||| ||
Sbjct: 378 ttacctaaaaaagttaagtttttcttcagtgcagcaatagaagcttgggatgcagagttc 437
Query: 800 tatgtcaaagttgaagataacattaatcttgacttagctgggttaattgagatgctcgaa 859
|| ||||| |||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 438 tacgtcaagattgacgataacattaatcttgacttggctgggttaattgagatgcttaac 497
Query: 860 ggccgtcgaggtagccaaggattgtacatgggttgtatgaaatcagggatggtcataagt 919
|||||||||||||| || ||||||||||| || ||||||||||| ||| | |||
Sbjct: 498 atccgtcgaggtagccctgggttgtacatgggctgcatgaaatcaggagctgtcgttagt 557
Query: 920 gaagagggccaacaatggtatgaacctgagtggtggaaatttggagattcaaaaacgtat 979
||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 558 gaagaggagcaacaatggtatgaacctgaatggtggaaatttggagattcaaggacgtat 617
Query: 980 tttcgacacgcttctggttctttgtttatcctctcaaaaaatttggctcgctacatcaac 1039
||||| || ||| |||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 618 tttcgccatgctgctggttctttatttatcctctcaaacaatttggctcgctacatcaac 677
Query: 1040 ataaatagtgcgtcactgcagagttatgcacacgatgatatat 1082
||||| ||||| || |||||||| ||||| || ||||| ||||
Sbjct: 678 ataaacagtgcatcgctgcagagctatgcgcatgatgacatat 720
Score = 65.9 bits (33), Expect = 7e-009
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 407 gaggcggagatggacctgaccaaggccaagagcgaggggtacctgtgggggaacaggact 466
||||||||||||||| | ||||||| ||||||||||| ||| ||||||||||| |||||
Sbjct: 39 gaggcggagatggacattgccaaggcgaagagcgagggctacttgtgggggaacgggact 98
Query: 467 g 467
|
Sbjct: 99 g 99
>gb|CA619844.1|CA619844 wl1n.pk0061.a10 wl1n Triticum aestivum cDNA clone wl1n.pk0061.a10 5'
end, mRNA sequence
Length = 272
Score = 515 bits (260), Expect = e-144
Identities = 260/260 (100%)
Strand = Plus / Plus
Query: 1069 acacgatgatatatcagtaggttcatggatgatgggactgaatgcaacttacgtggatga 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acacgatgatatatcagtaggttcatggatgatgggactgaatgcaacttacgtggatga 60
Query: 1129 tgaccggttgtgctgcagcagttccagacaagagaaaatctgttccaatgcttgagcgga 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaccggttgtgctgcagcagttccagacaagagaaaatctgttccaatgcttgagcgga 120
Query: 1189 aggcgtggctgctggcctgttgctgtacatcctgatgaagattttgcacacctgtcattt 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggcgtggctgctggcctgttgctgtacatcctgatgaagattttgcacacctgtcattt 180
Query: 1249 tgtatacactgctttcgtgaaccggaaaaggctactatccagatagaaacggcttgcacc 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtatacactgctttcgtgaaccggaaaaggctactatccagatagaaacggcttgcacc 240
Query: 1309 aaaatttaggaacttccatc 1328
||||||||||||||||||||
Sbjct: 241 aaaatttaggaacttccatc 260
>gb|BJ262652.1|BJ262652 BJ262652 Y. Ogihara unpublished cDNA library, Wh_h Triticum aestivum
cDNA clone whh19m04 3', mRNA sequence
Length = 760
Score = 454 bits (229), Expect = e-126
Identities = 458/533 (85%), Gaps = 1/533 (0%)
Strand = Plus / Minus
Query: 603 aaaagggtgtagctattcgttttgttattggtcggagtgcaaatcgaggtgatagcttgg 662
|||||||||| | |||||||||||||||||| || ||| | |||||||||||||||||||
Sbjct: 760 aaaagggtgtggttattcgttttgttattggccgaagtcctaatcgaggtgatagcttgg 701
Query: 663 accgtaatattgatgatgaaaatcggcagacaaaggacttcttgattcttgaaagtcatg 722
|||||||||| |||| ||||| | ||||||| || ||||||||||| |||||||| |
Sbjct: 700 accgtaatatcaatgaagaaaacagaaagacaaatgatttcttgattctggaaagtcacg 641
Query: 723 aagaggctgcagaagaattaccgagcaaagcaaaaattttcttcagtgctgcagttgaag 782
| || |||||||| |||||||| | |||| || ||||||||||||| ||| | ||||
Sbjct: 640 aggaagctgcagaggaattacctaaaaaagttaagtttttcttcagtgcagcaatagaag 581
Query: 783 cctgggatgcagaattttatgtcaaag-ttgaagataacattaatcttgacttagctggg 841
| ||||||||||| || || ||||||| |||| |||||||||||||||||||| ||||||
Sbjct: 580 cttgggatgcagagttctacgtcaaagattgacgataacattaatcttgacttggctggg 521
Query: 842 ttaattgagatgctcgaaggccgtcgaggtagccaaggattgtacatgggttgtatgaaa 901
|||||||||||||| | | ||||||||||||||| || ||||||||||| || ||||||
Sbjct: 520 ttaattgagatgcttaacgtccgtcgaggtagccatgggttgtacatgggctgcatgaaa 461
Query: 902 tcagggatggtcataagtgaagagggccaacaatggtatgaacctgagtggtggaaattt 961
||||| ||| | |||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 460 tcaggagctgtcgttagtgaagaggagcaacaatggtatgaacctgaatggtggaaattt 401
Query: 962 ggagattcaaaaacgtattttcgacacgcttctggttctttgtttatcctctcaaaaaat 1021
|||||||||| ||||||||||| || ||| |||||||||| |||||||||||||| |||
Sbjct: 400 ggagattcaaggacgtattttcgccatgctgctggttctttatttatcctctcaaacaat 341
Query: 1022 ttggctcgctacatcaacataaatagtgcgtcactgcagagttatgcacacgatgatata 1081
|||||||| |||||||||||||| ||||| || |||||||| ||||| || ||||| |||
Sbjct: 340 ttggctcggtacatcaacataaacagtgcatcgctgcagagctatgcgcatgatgacata 281
Query: 1082 tcagtaggttcatggatgatgggactgaatgcaacttacgtggatgatgaccg 1134
||||| ||||||||||||||||| || ||||| |||||||| ||||| |||||
Sbjct: 280 tcagttggttcatggatgatggggcttaatgccacttacgttgatgacgaccg 228
>gb|BQ608734.1|BQ608734 BRY_4645 wheat EST endosperm library Triticum aestivum cDNA 5', mRNA
sequence
Length = 564
Score = 357 bits (180), Expect = 1e-096
Identities = 396/464 (85%), Gaps = 3/464 (0%)
Strand = Plus / Plus
Query: 644 aatcgaggtgatagcttggaccgtaatattgatgatgaaaatcggcagacaaaggacttc 703
||||||||||||||||||||||||||||| |||| ||||| | ||||||| || |||
Sbjct: 4 aatcgaggtgatagcttggaccgtaatatcaatgaagaaaacagaaagacaaatgatttc 63
Query: 704 ttgattcttgaaagtcatgaagaggctgcagaagaattaccgagcaaagcaaaaattttc 763
|||||||| |||||||| || || |||||||| |||||||| | |||| || |||||
Sbjct: 64 ttgattctggaaagtcacgaggaagctgcagaggaattacctaaaaaagttaagtttttc 123
Query: 764 ttcagtgctgcagttgaagcctgggatgcagaattttatgtcaaagttgaagataacatt 823
|||||||| ||| | ||||| ||||||||||| || || ||||| |||| |||||||||
Sbjct: 124 ttcagtgcagcaatagaagcttgggatgcagagttctacgtcaagattgacgataacatt 183
Query: 824 aatcttgacttagctgggttaattgagatgctcgaaggccgtcgaggtagccaaggattg 883
||||||||||| |||||||||||||||||||| | | ||||||||||||||| || |||
Sbjct: 184 aatcttgacttggctgggttaattgagatgcttaacgtccgtcgaggtagccatgggttg 243
Query: 884 tacatgggttgtatgaaatcagggatggtcataagtgaagagggccaacaatggtatgaa 943
|||||||| || ||||||||||| ||| | |||||||||| |||||||||||||||
Sbjct: 244 tacatgggctgcatgaaatcaggagctgtcgttagtgaagaggagcaacaatggtatgaa 303
Query: 944 cctgagtggtggaaatttggagattcaaaaacgtattttcgacacgcttctggttctttg 1003
||||| |||||||||||||||||||||| ||||||||||| || ||| ||||||||||
Sbjct: 304 cctgaatggtggaaatttggagattcaaggacgtattttcgccatgctgctggttcttta 363
Query: 1004 tttatcctctcaaa-aaatttggctcgctacatcaacataaatagtgcgtcactgcagag 1062
|||||||||||||| || ||||||||| |||||||||||||| ||||| || ||||||||
Sbjct: 364 tttatcctctcaaacaattttggctcggtacatcaacataaacagtgcatcgctgcagag 423
Query: 1063 ttatgcacacgatgatatatc-agtaggttca-tggatgatggg 1104
||||| || ||||| ||||| ||| |||||| |||||||||||
Sbjct: 424 ctatgcgcatgatgacatatcaagttggttcattggatgatggg 467
>gb|BJ284330.1|BJ284330 BJ284330 Y. Ogihara unpublished cDNA library, Wh_r Triticum aestivum
cDNA clone whr2c12 3', mRNA sequence
Length = 560
Score = 331 bits (167), Expect = 8e-089
Identities = 323/376 (85%)
Strand = Plus / Minus
Query: 759 ttttcttcagtgctgcagttgaagcctgggatgcagaattttatgtcaaagttgaagata 818
|||| |||||||| ||| | |||| ||||||||||| || || ||||| |||| ||||
Sbjct: 528 ttttnttcagtgcagcaatanaagcttgggatgcagagttntacgtcaagattgacgata 469
Query: 819 acattaatcttgacttagctgggttaattgagatgctcgaaggccgtcgaggtagccaag 878
|||||||||||||||| |||||||||||||||||||| | |||||||||||||| |
Sbjct: 468 acattaatcttgacttggctgggttaattgagatgcttaacatccgtcgaggtagccctg 409
Query: 879 gattgtacatgggttgtatgaaatcagggatggtcataagtgaagagggccaacaatggt 938
| ||||||||||| || ||||||||||| ||| | |||||||||| ||||||||||
Sbjct: 408 ggttgtacatgggctgcatgaaatcaggagctgtcgttagtgaagaggagcaacaatggt 349
Query: 939 atgaacctgagtggtggaaatttggagattcaaaaacgtattttcgacacgcttctggtt 998
|||||||||| |||||||||||||||||||||| ||||||||||| || ||| ||||||
Sbjct: 348 atgaacctgaatggtggaaatttggagattcaaggacgtattttcgccatgctgctggtt 289
Query: 999 ctttgtttatcctctcaaaaaatttggctcgctacatcaacataaatagtgcgtcactgc 1058
|||| |||||||||||||| |||||||||||||||||||||||||| ||||| || ||||
Sbjct: 288 ctttatttatcctctcaaacaatttggctcgctacatcaacataaacagtgcatcgctgc 229
Query: 1059 agagttatgcacacgatgatatatcagtaggttcatggatgatgggactgaatgcaactt 1118
|||| ||||| || ||||| |||||||| ||||||||||||||||| || ||||| || |
Sbjct: 228 agagctatgcgcatgatgacatatcagttggttcatggatgatggggcttaatgccacct 169
Query: 1119 acgtggatgatgaccg 1134
|||| ||||| |||||
Sbjct: 168 acgttgatgacgaccg 153
>gb|BJ257082.1|BJ257082 BJ257082 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh19m04 5', mRNA sequence
Length = 655
Score = 325 bits (164), Expect = 5e-087
Identities = 308/356 (86%)
Strand = Plus / Plus
Query: 500 cttgccgtcattggagtttacactgggtttggctcccgtctcaagaggaacgtcttccgt 559
||||| |||||||||||||||||||| ||||||||||| |||||||||||| ||||||
Sbjct: 298 cttgcggtcattggagtttacactggctttggctcccggctcaagaggaacaccttccgc 357
Query: 560 ggctcctggatgccaagaggtgatgctctgaagaagcttgaggaaaagggtgtagctatt 619
|||||||||||||| |||||||||||| | |||| |||||||||||||||||| | ||||
Sbjct: 358 ggctcctggatgcccagaggtgatgctttaaagacgcttgaggaaaagggtgtggttatt 417
Query: 620 cgttttgttattggtcggagtgcaaatcgaggtgatagcttggaccgtaatattgatgat 679
|||||||||||||| || ||| | ||||||||||||||||||||||||||||| ||||
Sbjct: 418 cgttttgttattggccgaagtcctaatcgaggtgatagcttggaccgtaatatcaatgaa 477
Query: 680 gaaaatcggcagacaaaggacttcttgattcttgaaagtcatgaagaggctgcagaagaa 739
||||| | ||||||| || ||||||||||| |||||||| || || |||||||| |||
Sbjct: 478 gaaaacagaaagacaaatgatttcttgattctggaaagtcacgaggaagctgcagaggaa 537
Query: 740 ttaccgagcaaagcaaaaattttcttcagtgctgcagttgaagcctgggatgcagaattt 799
||||| | |||| || ||||||||||||| ||| | ||||| ||||||||||| ||
Sbjct: 538 ttacctaaaaaagttaagtttttcttcagtgcagcaatagaagcttgggatgcagagttc 597
Query: 800 tatgtcaaagttgaagataacattaatcttgacttagctgggttaattgagatgct 855
|| ||||| |||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 598 tacgtcaagattgacgataacattaatcttgacttggctgggttaattgagatgct 653
Score = 188 bits (95), Expect = 7e-046
Identities = 212/251 (84%)
Strand = Plus / Plus
Query: 209 ggcagggtccctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgccggc 268
||||||| ||| |||||||||||||||||| |||||||||||||| | ||||||||||||
Sbjct: 1 ggcagggcccccctcgtcatggccttcctcgcctgcctcgcctgggtgtacgtcgccggc 60
Query: 269 cgtttgtggcaggacgcgcagacccgggcgatcctgtccggcctcctcgagaagagctct 328
|| | |||||||||||||||||||||||| |||| ||||||||||| |||||||| |
Sbjct: 61 cggctatggcaggacgcgcagacccgggcggtcctctccggcctcctgcagaagagcacc 120
Query: 329 accagcgtcccgaaggtgctctcggtggaggacaagcttaggaaccttgggtgcaaggcg 388
| || |||| |||| | |||||||||| |||||||| ||| |||| || |||| | |
Sbjct: 121 agcaatctccccaaggagatctcggtggacgacaagctgagggacctcggatgcactggg 180
Query: 389 attggaaggaaaattgttgaggcggagatggacctgaccaaggccaagagcgaggggtac 448
||||| ||||| || | ||||||||||||||| | ||||||||||||||||||| |||
Sbjct: 181 attgggaggaagatcgccgaggcggagatggacattgccaaggccaagagcgagggctac 240
Query: 449 ctgtgggggaa 459
||||||||||
Sbjct: 241 ttgtgggggaa 251
>gb|CD920019.1|CD920019 G608.115I16F010911 G608 Triticum aestivum cDNA clone G608115I16, mRNA
sequence
Length = 657
Score = 325 bits (164), Expect = 5e-087
Identities = 281/320 (87%)
Strand = Plus / Plus
Query: 815 gataacattaatcttgacttagctgggttaattgagatgctcgaaggccgtcgaggtagc 874
|||||||||||||||||||| |||||||||||||||||||| | | |||||||||||||
Sbjct: 35 gataacattaatcttgacttggctgggttaattgagatgcttaacgtccgtcgaggtagc 94
Query: 875 caaggattgtacatgggttgtatgaaatcagggatggtcataagtgaagagggccaacaa 934
|| || ||||||||||| || ||||||||||| ||| | |||||||||| ||||||
Sbjct: 95 catgggttgtacatgggctgcatgaaatcaggagctgtcgttagtgaagaggagcaacaa 154
Query: 935 tggtatgaacctgagtggtggaaatttggagattcaaaaacgtattttcgacacgcttct 994
|||||||||||||| |||||||||||||||||||||| ||||||||||| || ||| ||
Sbjct: 155 tggtatgaacctgaatggtggaaatttggagattcaaggacgtattttcgccatgctgct 214
Query: 995 ggttctttgtttatcctctcaaaaaatttggctcgctacatcaacataaatagtgcgtca 1054
|||||||| |||||||||||||| ||||||||||| |||||||||||||| ||||| ||
Sbjct: 215 ggttctttatttatcctctcaaacaatttggctcggtacatcaacataaacagtgcatcg 274
Query: 1055 ctgcagagttatgcacacgatgatatatcagtaggttcatggatgatgggactgaatgca 1114
|||||||| ||||| || ||||| |||||||| ||||||||||||||||| || |||||
Sbjct: 275 ctgcagagctatgcgcatgatgacatatcagttggttcatggatgatggggcttaatgcc 334
Query: 1115 acttacgtggatgatgaccg 1134
|||||||| ||||| |||||
Sbjct: 335 acttacgttgatgacgaccg 354
>gb|CA621143.1|CA621143 wl1n.pk0073.d11 wl1n Triticum aestivum cDNA clone wl1n.pk0073.d11 5'
end, mRNA sequence
Length = 391
Score = 264 bits (133), Expect = 1e-068
Identities = 284/322 (88%), Gaps = 11/322 (3%)
Strand = Plus / Plus
Query: 939 atgaacctgagtggtggaaatttggagattcaaaaacgtattttcgacacgcttctggtt 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 atgaacctgagtggtggaaatttggagattcaaaaacgtattttcgacacgcttcnggtt 60
Query: 999 ctttgtttatcctctcaaaaaatttggctc-gctacatcaacataaatagtgcgtcactg 1057
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 61 ctttgtttatcctcncaaaaaatttggctccgctacatcaacataaatagtgcgtcactg 120
Query: 1058 cagagttatgcacacgatgatatatcagtaggttca-tggatgatggg-actgaatgcaa 1115
||||||| ||||||||||||||||| | ||||| ||||||||||| |||||||||||
Sbjct: 121 cagagttnatcacacgatgatatatcaatnagttcaatggatgatggggactgaatgcaa 180
Query: 1116 ctta-cgt-ggatgatgaccggttgtgctgcagc-agttccagac-aagagaaaatctgt 1171
|||| ||| |||||||||||| | ||||||| | |||||||| |||||||| || |
Sbjct: 181 cttaacgtnggatgatgaccgntntgcctgcagcnatttccagaccaagagaaatcct-t 239
Query: 1172 tccaatgc-ttgagcggaaggcgtggctgctggcctgttgctgtacatcctgatgaagat 1230
|||||||| || | | | | || | ||||||||| |||||| ||||| ||||||||| ||
Sbjct: 240 tccaatgcctttanccggaagccttgctgctggc-tgttgccgtacaccctgatgaa-at 297
Query: 1231 tttgcacacctgtcattttgta 1252
||||||||||| |||||||||
Sbjct: 298 tttgcacaccttccattttgta 319
>gb|AJ613824.1|AJ613824 AJ613824 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 09322R, mRNA
sequence
Length = 688
Score = 264 bits (133), Expect = 1e-068
Identities = 217/245 (88%)
Strand = Plus / Plus
Query: 500 cttgccgtcattggagtttacactgggtttggctcccgtctcaagaggaacgtcttccgt 559
||||| |||||||||||||||||||| ||||||||||| |||||||||||| |||||||
Sbjct: 429 cttgcggtcattggagtttacactggctttggctcccggctcaagaggaacaccttccgt 488
Query: 560 ggctcctggatgccaagaggtgatgctctgaagaagcttgaggaaaagggtgtagctatt 619
|||||||||||||| |||||||||||| | |||| |||||||||||||||||| | ||||
Sbjct: 489 ggctcctggatgcccagaggtgatgctttaaagacgcttgaggaaaagggtgtggttatt 548
Query: 620 cgttttgttattggtcggagtgcaaatcgaggtgatagcttggaccgtaatattgatgat 679
|||||||||||||| || ||| | |||||||||||||||||||||||||||||| ||||
Sbjct: 549 cgttttgttattggccgaagtcctaatcgaggtgatagcttggaccgtaatattaatgaa 608
Query: 680 gaaaatcggcagacaaaggacttcttgattcttgaaagtcatgaagaggctgcagaagaa 739
|| || | ||||||| || ||||||||||| |||||||| || ||||||||||| |||
Sbjct: 609 gagaacagaaagacaaacgatttcttgattctggaaagtcacgaggaggctgcagaggaa 668
Query: 740 ttacc 744
|||||
Sbjct: 669 ttacc 673
Score = 226 bits (114), Expect = 3e-057
Identities = 296/356 (83%), Gaps = 3/356 (0%)
Strand = Plus / Plus
Query: 115 cgccgccatggagacgctggccagcgccatgcggcgcgagaaccgccggtccaaggcccc 174
||||||||||||||| ||||| |||| ||||||||| || |||||||| | |||| ||||
Sbjct: 35 cgccgccatggagacactggcgagcgtcatgcggcgggacaaccgccgcttcaagccccc 94
Query: 175 gccctcctcctctgcttcctccgccctcgcctcgg---gcagggtccctctcgtcatggc 231
|||||||||||| || | ||||| |||||| | |||||| ||| |||||||||||
Sbjct: 95 gccctcctcctccgccgcggccgcctccgcctccgccggcagggcccccctcgtcatggc 154
Query: 232 cttcctctcctgcctcgcctggctctacgtcgccggccgtttgtggcaggacgcgcagac 291
||||||| |||||||||||||| | |||||||||||||| | |||||||||||||||||
Sbjct: 155 cttcctcgcctgcctcgcctgggtgtacgtcgccggccggctatggcaggacgcgcagac 214
Query: 292 ccgggcgatcctgtccggcctcctcgagaagagctctaccagcgtcccgaaggtgctctc 351
||||||| |||| ||||||||||| |||||||| | | || |||| |||| | ||||
Sbjct: 215 ccgggcggtcctctccggcctcctgcagaagagcaccagcaatctccccaaggagatctc 274
Query: 352 ggtggaggacaagcttaggaaccttgggtgcaaggcgattggaaggaaaattgttgaggc 411
|||||| |||||||| ||| |||| || |||| | |||||| ||||| || | |||||
Sbjct: 275 ggtggacgacaagctgagggacctcggatgcactgggattgggaggaagatcgccgaggc 334
Query: 412 ggagatggacctgaccaaggccaagagcgaggggtacctgtgggggaacaggactg 467
|||||||||| | ||||||| ||||||||||| ||| ||||||||||| ||||||
Sbjct: 335 ggagatggacattgccaaggcgaagagcgagggctacttgtgggggaacgggactg 390
>gb|BQ239768.1|BQ239768 TaE05027A04R TaE05 Triticum aestivum cDNA clone TaE05027A04R, mRNA
sequence
Length = 501
Score = 234 bits (118), Expect = 1e-059
Identities = 297/356 (83%), Gaps = 3/356 (0%)
Strand = Plus / Plus
Query: 115 cgccgccatggagacgctggccagcgccatgcggcgcgagaaccgccggtccaaggcccc 174
||||||||||||||| ||||| |||| ||||||||| || |||||||| | |||| ||||
Sbjct: 78 cgccgccatggagacactggcgagcgtcatgcggcgggacaaccgccgcttcaagccccc 137
Query: 175 gccctcctcctctgcttcctccgccctcgcctcgg---gcagggtccctctcgtcatggc 231
|||||||||||| || || ||||| |||||| | |||||| ||| |||||||||||
Sbjct: 138 gccctcctcctccgccgccgccgcctccgcctccgccggcagggcccccctcgtcatggc 197
Query: 232 cttcctctcctgcctcgcctggctctacgtcgccggccgtttgtggcaggacgcgcagac 291
||||||| |||||||||||||| | |||||||||||||| | |||||||||||||||||
Sbjct: 198 cttcctcgcctgcctcgcctgggtgtacgtcgccggccggctatggcaggacgcgcagac 257
Query: 292 ccgggcgatcctgtccggcctcctcgagaagagctctaccagcgtcccgaaggtgctctc 351
||||||| |||| ||||||||||| |||||||| | | || |||| |||| | ||||
Sbjct: 258 ccgggcggtcctctccggcctcctgcagaagagcaccagcaatctccccaaggagatctc 317
Query: 352 ggtggaggacaagcttaggaaccttgggtgcaaggcgattggaaggaaaattgttgaggc 411
|||||| |||||||| ||| |||| || |||| | |||||| ||||| || | |||||
Sbjct: 318 ggtggacgacaagctgagggacctcggatgcactgggattgggaggaagatcgccgaggc 377
Query: 412 ggagatggacctgaccaaggccaagagcgaggggtacctgtgggggaacaggactg 467
|||||||||| | ||||||| ||||||||||| ||| ||||||||||| ||||||
Sbjct: 378 ggagatggacattgccaaggcgaagagcgagggctacttgtgggggaacgggactg 433
Score = 44.1 bits (22), Expect = 0.025
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 500 cttgccgtcattggagtttacactgg 525
||||| ||||||||||||||||||||
Sbjct: 472 cttgcggtcattggagtttacactgg 497
>gb|CA483801.1|CA483801 WHE3205_D12_G23ZS Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE3205_D12_G23, mRNA sequence
Length = 448
Score = 234 bits (118), Expect = 1e-059
Identities = 297/356 (83%), Gaps = 3/356 (0%)
Strand = Plus / Plus
Query: 115 cgccgccatggagacgctggccagcgccatgcggcgcgagaaccgccggtccaaggcccc 174
||||||||||||||| ||||| |||| ||||||||| || |||||||| | |||| ||||
Sbjct: 83 cgccgccatggagacactggcgagcgtcatgcggcgggacaaccgccgcttcaagccccc 142
Query: 175 gccctcctcctctgcttcctccgccctcgcctcgg---gcagggtccctctcgtcatggc 231
|||||||||||| || || ||||| |||||| | |||||| ||| |||||||||||
Sbjct: 143 gccctcctcctccgccgccgccgcctccgcctccgccggcagggcccccctcgtcatggc 202
Query: 232 cttcctctcctgcctcgcctggctctacgtcgccggccgtttgtggcaggacgcgcagac 291
||||||| |||||||||||||| | |||||||||||||| | |||||||||||||||||
Sbjct: 203 cttcctcgcctgcctcgcctgggtgtacgtcgccggccggctatggcaggacgcgcagac 262
Query: 292 ccgggcgatcctgtccggcctcctcgagaagagctctaccagcgtcccgaaggtgctctc 351
||||||| |||| ||||||||||| |||||||| | | || |||| |||| | ||||
Sbjct: 263 ccgggcggtcctctccggcctcctgcagaagagcaccagcaatctccccaaggagatctc 322
Query: 352 ggtggaggacaagcttaggaaccttgggtgcaaggcgattggaaggaaaattgttgaggc 411
|||||| |||||||| ||| |||| || |||| | |||||| ||||| || | |||||
Sbjct: 323 ggtggacgacaagctgagggacctcggatgcactgggattgggaggaagatcgccgaggc 382
Query: 412 ggagatggacctgaccaaggccaagagcgaggggtacctgtgggggaacaggactg 467
|||||||||| | ||||||| ||||||||||| ||| ||||||||||| ||||||
Sbjct: 383 ggagatggacattgccaaggcgaagagcgagggctacttgtgggggaacgggactg 438
>gb|CK169116.1|CK169116 FGAS043724 Triticum aestivum FGAS: TaLt6 Triticum aestivum cDNA, mRNA
sequence
Length = 896
Score = 234 bits (118), Expect = 1e-059
Identities = 184/206 (89%)
Strand = Plus / Minus
Query: 929 caacaatggtatgaacctgagtggtggaaatttggagattcaaaaacgtattttcgacac 988
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||
Sbjct: 555 caacaatggtatgaacctgaatggtggaaatttggagattcaaggacgtattttcgccat 496
Query: 989 gcttctggttctttgtttatcctctcaaaaaatttggctcgctacatcaacataaatagt 1048
||| |||||||||| |||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 495 gctgctggttctttatttatcctctcaaacaatttggctcgctacatcaacataaacagt 436
Query: 1049 gcgtcactgcagagttatgcacacgatgatatatcagtaggttcatggatgatgggactg 1108
|| || |||||||| ||||| || ||||| |||||||| ||||||||||||||||| ||
Sbjct: 435 gcatcgctgcagagctatgcgcatgatgacatatcagttggttcatggatgatggggctt 376
Query: 1109 aatgcaacttacgtggatgatgaccg 1134
||||| || ||||| ||||| |||||
Sbjct: 375 aatgccacctacgttgatgacgaccg 350
Score = 188 bits (95), Expect = 7e-046
Identities = 258/309 (83%), Gaps = 3/309 (0%)
Strand = Plus / Minus
Query: 527 tttggctcccgtctcaagaggaacgtcttccgtggctcctggatgccaagaggtgatgct 586
||||||||| | ||||||||| || ||||||||||||||||||||| ||||||||||||
Sbjct: 868 tttggctccgggctcaagagggacaccttccgtggctcctggatgcccagaggtgatgct 809
Query: 587 ctgaagaagcttgaggaaaa-gggtgtagctattcgttttgttattggtcggagtgcaaa 645
| |||| || ||||||||| |||||| | |||||||||||| ||| || ||| | ||
Sbjct: 808 ttaaagacgc-tgaggaaaangggtgt-gttattcgttttgtanttgnccgaagtcctaa 751
Query: 646 tcgaggtgatagcttggaccgtaatattgatgatgaaaatcggcagacaaaggacttctt 705
||||||||||||||||||||||||| || |||| || || | ||||||| || |||||
Sbjct: 750 tcgaggtgatagcttggaccgtaatgttaatgaagagaacagaaagacaaacgatttctt 691
Query: 706 gattcttgaaagtcatgaagaggctgcagaagaattaccgagcaaagcaaaaattttctt 765
|||||| |||||||| || ||||||||||| |||||||| | |||| || |||||||
Sbjct: 690 gattctggaaagtcacgaggaggctgcagaggaattacctaaaaaagttaagtttttctt 631
Query: 766 cagtgctgcagttgaagcctgggatgcagaattttatgtcaaagttgaagataacattaa 825
|||||| ||| | ||||| ||||||||||| || || ||||| |||| |||||||||||
Sbjct: 630 cagtgcagcaatagaagcttgggatgcagagttctacgtcaagattgacgataacattaa 571
Query: 826 tcttgactt 834
|||||||||
Sbjct: 570 tcttgactt 562
>gb|BQ236778.1|BQ236778 TaE05027A04F TaE05 Triticum aestivum cDNA clone TaE05027A04F, mRNA
sequence
Length = 495
Score = 218 bits (110), Expect = 8e-055
Identities = 191/218 (87%)
Strand = Plus / Minus
Query: 917 agtgaagagggccaacaatggtatgaacctgagtggtggaaatttggagattcaaaaacg 976
|||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 422 agtgaagaggagcaacaatggtatgaacctgaatggtggaaatttggagattcaaggacg 363
Query: 977 tattttcgacacgcttctggttctttgtttatcctctcaaaaaatttggctcgctacatc 1036
|||||||| || ||| |||| ||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 362 tattttcgccaagctgctgggtctttatttatcctctcaaacaatttggctcggtacatc 303
Query: 1037 aacataaatagtgcgtcactgcagagttatgcacacgatgatatatcagtaggttcatgg 1096
|||||||| ||||| || |||||||| |||| || ||||| |||||||| |||||||||
Sbjct: 302 aacataaacagtgcatcgctgcagagctatgggcatgatgacatatcagttggttcatgg 243
Query: 1097 atgatgggactgaatgcaacttacgtggatgatgaccg 1134
|||||||| || ||||| || ||||| ||||| |||||
Sbjct: 242 atgatggggcttaatgccacctacgttgatgacgaccg 205
>gb|BM136776.1|BM136776 WHE2617_C02_E03ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2617_C02_E03,
mRNA sequence
Length = 155
Score = 141 bits (71), Expect = 1e-031
Identities = 98/107 (91%)
Strand = Plus / Plus
Query: 209 ggcagggtccctctcgtcatggccttcctctcctgcctcgcctggctctacgtcgccggc 268
||||||||||| |||||||||||||||||| |||||||||||||| | ||||||||||||
Sbjct: 49 ggcagggtccccctcgtcatggccttcctcgcctgcctcgcctgggtgtacgtcgccggc 108
Query: 269 cgtttgtggcaggacgcgcagacccgggcgatcctgtccggcctcct 315
|| | ||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 109 cggctatggcaggacgcgcagacccgggctatcctctccggcctcct 155
>gb|CA682278.1|CA682278 wlm24.pk0028.e3 wlm24 Triticum aestivum cDNA clone wlm24.pk0028.e3
5' end, mRNA sequence
Length = 502
Score = 133 bits (67), Expect = 4e-029
Identities = 150/177 (84%), Gaps = 3/177 (1%)
Strand = Plus / Plus
Query: 115 cgccgccatggagacgctggccagcgccatgcggcgcgagaaccgccggtccaaggcccc 174
||||||||||||||| ||||| |||| ||||||||| || |||||||| | |||| ||||
Sbjct: 99 cgccgccatggagacactggcgagcgtcatgcggcgggacaaccgccgcttcaagccccc 158
Query: 175 gccctcctcctctgcttcctccgccctcgcctcgg---gcagggtccctctcgtcatggc 231
|||||||||||| || || ||||| |||||| | |||||| ||| |||||||||||
Sbjct: 159 gccctcctcctccgccgccgccgcctccgcctccgccggcagggcccccctcgtcatggc 218
Query: 232 cttcctctcctgcctcgcctggctctacgtcgccggccgtttgtggcaggacgcgca 288
||||||| |||||||||||||| | |||||||||||||| | ||||| ||||||||
Sbjct: 219 cttcctcgcctgcctcgcctgggtgtacgtcgccggccggctatggcaagacgcgca 275
>gb|BE400193.1|BE400193 AWB001.A07F000328 ITEC AWB Wheat Meiotic Stage Library Triticum
aestivum cDNA clone AWB001.A07, mRNA sequence
Length = 530
Score = 42.1 bits (21), Expect = 0.10
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 171 ccccgccctcctcctctgcttcctc 195
||||| |||||||||||||||||||
Sbjct: 104 ccccgtcctcctcctctgcttcctc 128
>gb|BM136452.1|BM136452 WHE2610_F03_K06ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2610_F03_K06,
mRNA sequence
Length = 484
Score = 42.1 bits (21), Expect = 0.10
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 935 tggtatgaacctgagtggtggaaatttgg 963
||||||||||| || ||||||||||||||
Sbjct: 326 tggtatgaaccggattggtggaaatttgg 354
>gb|BJ214492.1|BJ214492 BJ214492 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh2l02 3', mRNA sequence
Length = 691
Score = 42.1 bits (21), Expect = 0.10
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 935 tggtatgaacctgagtggtggaaatttgg 963
||||||||||| || ||||||||||||||
Sbjct: 532 tggtatgaaccggattggtggaaatttgg 504
>gb|BJ290122.1|BJ290122 BJ290122 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl8p10 5', mRNA sequence
Length = 615
Score = 42.1 bits (21), Expect = 0.10
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 785 tgggatgcagaattttatgtcaaagttga 813
||||||||||| |||||||| ||||||||
Sbjct: 40 tgggatgcagatttttatgtgaaagttga 68
>gb|CA599307.1|CA599307 waw1c.pk001.m9 waw1c Triticum aestivum cDNA clone waw1c.pk001.m9 5'
end, mRNA sequence
Length = 575
Score = 42.1 bits (21), Expect = 0.10
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 171 ccccgccctcctcctctgcttcctc 195
||||| |||||||||||||||||||
Sbjct: 455 ccccgtcctcctcctctgcttcctc 431
>gb|CA612112.1|CA612112 wr1.pk0140.g12 wr1 Triticum aestivum cDNA clone wr1.pk0140.g12 5'
end, mRNA sequence
Length = 365
Score = 42.1 bits (21), Expect = 0.10
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 785 tgggatgcagaattttatgtcaaagttga 813
||||||||||| |||||||| ||||||||
Sbjct: 40 tgggatgcagatttttatgtgaaagttga 68
>gb|CD373894.1|CD373894 WHE2610_F03_K06ZT Sumai3 Wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
WHE2610_F03_K06, mRNA sequence
Length = 738
Score = 42.1 bits (21), Expect = 0.10
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 935 tggtatgaacctgagtggtggaaatttgg 963
||||||||||| || ||||||||||||||
Sbjct: 559 tggtatgaaccggattggtggaaatttgg 531
>gb|CK162977.1|CK162977 FGAS015588 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1052
Score = 42.1 bits (21), Expect = 0.10
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 785 tgggatgcagaattttatgtcaaagttga 813
||||||||||| |||||||| ||||||||
Sbjct: 889 tgggatgcagatttttatgtgaaagttga 917
>gb|CK162978.1|CK162978 FGAS015589 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1097
Score = 42.1 bits (21), Expect = 0.10
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 785 tgggatgcagaattttatgtcaaagttga 813
||||||||||| |||||||| ||||||||
Sbjct: 885 tgggatgcagatttttatgtgaaagttga 913
>gb|CA498406.1|CA498406 WHE3243_A03_B05ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE3243_A03_B05, mRNA sequence
Length = 634
Score = 40.1 bits (20), Expect = 0.40
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 620 cgttttgttattggtcggagtgcaaatc 647
|||||||||||||| || ||||||||||
Sbjct: 535 cgttttgttattggacgaagtgcaaatc 562
>gb|CD878754.1|CD878754 AZO4.103I24F010929 AZO4 Triticum aestivum cDNA clone AZO4103I24,
mRNA sequence
Length = 647
Score = 40.1 bits (20), Expect = 0.40
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 620 cgttttgttattggtcggagtgcaaatc 647
|||||||||||||| || ||||||||||
Sbjct: 522 cgttttgttattggacgaagtgcaaatc 549
>gb|AL813053.1|AL813053 AL813053 e:411 Triticum aestivum cDNA clone A02_e411_plate_10, mRNA
sequence
Length = 441
Score = 40.1 bits (20), Expect = 0.40
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 620 cgttttgttattggtcggagtgcaaatc 647
|||||||||||||| || ||||||||||
Sbjct: 373 cgttttgttattggacgaagtgcaaatc 400
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 334,095
Number of Sequences: 636343
Number of extensions: 334095
Number of successful extensions: 95053
Number of sequences better than 0.5: 28
Number of HSP's better than 0.5 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94975
Number of HSP's gapped (non-prelim): 51
length of query: 1380
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1360
effective length of database: 354,513,379
effective search space: 482138195440
effective search space used: 482138195440
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)