BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419417.2.5
(733 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG607934.1|BG607934 WHE2475_E05_I09ZS Triticum monococcu... 321 4e-086
gb|CD492130.1|CD492130 WHE2475_E05_I09ZT Triticum monococcu... 321 4e-086
gb|CD879996.1|CD879996 AZO4.106P21R011122 AZO4 Triticum aes... 252 3e-065
gb|CA624436.1|CA624436 wl1n.pk0119.c5 wl1n Triticum aestivu... 202 2e-050
gb|BJ240563.1|BJ240563 BJ240563 Y. Ogihara unpublished cDNA... 190 9e-047
gb|BJ240770.1|BJ240770 BJ240770 Y. Ogihara unpublished cDNA... 190 9e-047
gb|BJ239251.1|BJ239251 BJ239251 Y. Ogihara unpublished cDNA... 165 5e-039
gb|BJ266139.1|BJ266139 BJ266139 Y. Ogihara unpublished cDNA... 165 5e-039
gb|BJ239461.1|BJ239461 BJ239461 Y. Ogihara unpublished cDNA... 121 7e-026
gb|CA609359.1|CA609359 wr1.pk0106.e4 wr1 Triticum aestivum ... 115 4e-024
gb|BJ234487.1|BJ234487 BJ234487 Y. Ogihara unpublished cDNA... 66 4e-009
gb|CA625704.1|CA625704 wl1n.pk0133.c11 wl1n Triticum aestiv... 54 1e-005
gb|CD913800.1|CD913800 G550.119F02R010920 G550 Triticum aes... 54 1e-005
gb|CD894683.1|CD894683 G118.126N14R011119 G118 Triticum aes... 48 9e-004
gb|CD897190.1|CD897190 G174.105B18F010824 G174 Triticum aes... 48 9e-004
gb|CD897191.1|CD897191 G174.105B18R011120 G174 Triticum aes... 48 9e-004
gb|CD490941.1|CD490941 WHE3008_H06_P12ZT Wheat etiolated se... 44 0.013
gb|BF473283.1|BF473283 WHE0926_F12_K24ZS Wheat 5-15 DAP spi... 42 0.053
gb|BF483316.1|BF483316 WHE1791_D05_G09ZS Wheat pre-anthesis... 42 0.053
gb|BM137936.1|BM137936 WHE473_F02_L03ZS Wheat Fusarium gram... 42 0.053
gb|BM138675.1|BM138675 WHE0496_E09_I18ZS Wheat Fusarium gra... 42 0.053
gb|BJ207110.1|BJ207110 BJ207110 Y. Ogihara unpublished cDNA... 42 0.053
gb|BJ208051.1|BJ208051 BJ208051 Y. Ogihara unpublished cDNA... 42 0.053
gb|BJ214392.1|BJ214392 BJ214392 Y. Ogihara unpublished cDNA... 42 0.053
gb|BJ215331.1|BJ215331 BJ215331 Y. Ogihara unpublished cDNA... 42 0.053
gb|BJ218685.1|BJ218685 BJ218685 Y. Ogihara unpublished cDNA... 42 0.053
gb|BJ315409.1|BJ315409 BJ315409 Y. Ogihara unpublished cDNA... 42 0.053
gb|BJ320914.1|BJ320914 BJ320914 Y. Ogihara unpublished cDNA... 42 0.053
gb|CA629271.1|CA629271 wle1n.pk0024.f5 wle1n Triticum aesti... 42 0.053
gb|CD871802.1|CD871802 AZO2.119B15F010207 AZO2 Triticum aes... 42 0.053
gb|CD894557.1|CD894557 G118.126I10F010823 G118 Triticum aes... 42 0.053
gb|CD894558.1|CD894558 G118.126I10R011119 G118 Triticum aes... 42 0.053
gb|CD895053.1|CD895053 G118.127N13R011119 G118 Triticum aes... 42 0.053
gb|CD930608.1|CD930608 GR45.111N11F010418 GR45 Triticum aes... 42 0.053
gb|CD938061.1|CD938061 OV.108P07F010206 OV Triticum aestivu... 42 0.053
gb|CK162328.1|CK162328 FGAS014920 Triticum aestivum FGAS: L... 42 0.053
gb|CK208206.1|CK208206 FGAS019890 Triticum aestivum FGAS: L... 42 0.053
gb|AL810086.1|AL810086 AL810086 d:15 Triticum aestivum cDNA... 42 0.053
gb|AL810577.1|AL810577 AL810577 e:29 Triticum aestivum cDNA... 42 0.053
gb|AL811907.1|AL811907 AL811907 d:15 Triticum aestivum cDNA... 42 0.053
gb|CV064525.1|CV064525 WNEL12a12 Wheat EST endosperm librar... 42 0.053
gb|CV781981.1|CV781981 FGAS076394 Triticum aestivum FGAS: L... 42 0.053
gb|CA594383.1|CA594383 wpa1c.pk006.h19 wpa1c Triticum aesti... 40 0.21
gb|CD454581.1|CD454581 WHE2328_C01_F02ZT CS wheat pre-anthe... 40 0.21
gb|CD907429.1|CD907429 G468.106N24F010813 G468 Triticum aes... 40 0.21
gb|CD926767.1|CD926767 GR45.100A06F010302 GR45 Triticum aes... 40 0.21
>gb|BG607934.1|BG607934 WHE2475_E05_I09ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2475_E05_I09,
mRNA sequence
Length = 707
Score = 321 bits (162), Expect = 4e-086
Identities = 282/322 (87%)
Strand = Plus / Plus
Query: 11 ctgatgaactatgtcaaggagcggtacaatagcccaacggtttacatcactgaaaatggg 70
|||||||||||||||||| | ||||||| |||||| | | |||||||| ||||| |||
Sbjct: 315 ctgatgaactatgtcaagaacaggtacaacagcccaccaatctacatcaccgaaaacggg 374
Query: 71 atggacgacggcaacagccctttcacctccatccaggacgccctcaaggacagcaagagg 130
||||| ||| |||||||||| |||| || || |||||||||||||||||| |||| ||
Sbjct: 375 atggatgacagcaacagccccttcattgccctcaaggacgccctcaaggacaccaagcgg 434
Query: 131 atcaagtaccacaacggctacctcaacaacgttgctgcctccataaaggaggacgggtgt 190
|||||||||||||||| |||||||| ||| | ||||||||||||||||||||||||||
Sbjct: 435 atcaagtaccacaacgactacctcaccaatctggctgcctccataaaggaggacgggtgc 494
Query: 191 gacgtgcgtgggtacttcgcgtggtcgttgctggacaactgggaatgggccgccgggtac 250
|||||||| || |||||||||||||| |||| ||||||||||| ||||| ||||| |||
Sbjct: 495 gacgtgcgcggatacttcgcgtggtctctgctagacaactgggagtgggcggccggatac 554
Query: 251 acctccagattcgggctctacttcgtggactacaaggataacctcaagaggtaccccaag 310
|| ||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 555 acgtccaggttcgggctctacttcgtggactacaacgataagctcaagaggtaccccaag 614
Query: 311 aactcggtccagtggttcaaga 332
| |||||| |||||||||||||
Sbjct: 615 agctcggtacagtggttcaaga 636
>gb|CD492130.1|CD492130 WHE2475_E05_I09ZT Triticum monococcum DV92 early reproductive apex
cDNA library Triticum monococcum cDNA clone
WHE2475_E05_I09, mRNA sequence
Length = 694
Score = 321 bits (162), Expect = 4e-086
Identities = 282/322 (87%)
Strand = Plus / Minus
Query: 11 ctgatgaactatgtcaaggagcggtacaatagcccaacggtttacatcactgaaaatggg 70
|||||||||||||||||| | ||||||| |||||| | | |||||||| ||||| |||
Sbjct: 569 ctgatgaactatgtcaagaacaggtacaacagcccaccaatctacatcaccgaaaacggg 510
Query: 71 atggacgacggcaacagccctttcacctccatccaggacgccctcaaggacagcaagagg 130
||||| ||| |||||||||| |||| || || |||||||||||||||||| |||| ||
Sbjct: 509 atggatgacagcaacagccccttcattgccctcaaggacgccctcaaggacaccaagcgg 450
Query: 131 atcaagtaccacaacggctacctcaacaacgttgctgcctccataaaggaggacgggtgt 190
|||||||||||||||| |||||||| ||| | ||||||||||||||||||||||||||
Sbjct: 449 atcaagtaccacaacgactacctcaccaatctggctgcctccataaaggaggacgggtgc 390
Query: 191 gacgtgcgtgggtacttcgcgtggtcgttgctggacaactgggaatgggccgccgggtac 250
|||||||| || |||||||||||||| |||| ||||||||||| ||||| ||||| |||
Sbjct: 389 gacgtgcgcggatacttcgcgtggtctctgctagacaactgggagtgggcggccggatac 330
Query: 251 acctccagattcgggctctacttcgtggactacaaggataacctcaagaggtaccccaag 310
|| ||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 329 acgtccaggttcgggctctacttcgtggactacaacgataagctcaagaggtaccccaag 270
Query: 311 aactcggtccagtggttcaaga 332
| |||||| |||||||||||||
Sbjct: 269 agctcggtacagtggttcaaga 248
>gb|CD879996.1|CD879996 AZO4.106P21R011122 AZO4 Triticum aestivum cDNA clone AZO4106P21,
mRNA sequence
Length = 530
Score = 252 bits (127), Expect = 3e-065
Identities = 235/271 (86%)
Strand = Plus / Minus
Query: 62 gaaaatgggatggacgacggcaacagccctttcacctccatccaggacgccctcaaggac 121
||||| |||||||| ||| || ||||||| |||| || || |||||||||||||||||
Sbjct: 525 gaaaacgggatggatgacagccacagccccttcattgccctcaaggacgccctcaaggac 466
Query: 122 agcaagaggatcaagtaccacaacggctacctcaacaacgttgctgcctccataaaggag 181
| || |||| ||||||||| ||| |||||||| ||| | || |||||||||||||||
Sbjct: 465 ccctagcggataaagtaccaccacgactacctcaccaatctggccgcctccataaaggag 406
Query: 182 gacgggtgtgacgtgcgtgggtacttcgcgtggtcgttgctggacaactgggaatgggcc 241
|||||||| |||||||| || ||||||||||||||| |||||||||||||||| |||||
Sbjct: 405 gacgggtgcgacgtgcgcggctacttcgcgtggtcgctgctggacaactgggagtgggcg 346
Query: 242 gccgggtacacctccagattcgggctctacttcgtggactacaaggataacctcaagagg 301
||||||||| | ||||| ||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 345 gccgggtactcgtccaggttcgggctctacttcgtcgactacaacgataagctcaagagg 286
Query: 302 taccccaagaactcggtccagtggttcaaga 332
|||||||||| |||||| |||||||||||||
Sbjct: 285 taccccaagagctcggtgcagtggttcaaga 255
>gb|CA624436.1|CA624436 wl1n.pk0119.c5 wl1n Triticum aestivum cDNA clone wl1n.pk0119.c5 5'
end, mRNA sequence
Length = 181
Score = 202 bits (102), Expect = 2e-050
Identities = 118/126 (93%)
Strand = Plus / Minus
Query: 415 tggctacaagccgacactgttgcagctgtttggactgctgcagctgcaatccatagagag 474
||| ||||| |||||||| ||||||||||||||| | ||||||||||||||||||||| |
Sbjct: 181 tggntacaanccgacactnttgcagctgtttggantnctgcagctgcaatccatagagng 122
Query: 475 aaaaatactgtagaagccgcagccgcagccggattgcagccgcagcaagccgcagcgaac 534
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaaatactntngaagccgcagccgcagccggattgcagccgcagcaagccgcagcgaac 62
Query: 535 aagctg 540
||||||
Sbjct: 61 aagctg 56
>gb|BJ240563.1|BJ240563 BJ240563 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe16c10 3', mRNA sequence
Length = 649
Score = 190 bits (96), Expect = 9e-047
Identities = 270/328 (82%)
Strand = Plus / Minus
Query: 5 aggaagctgatgaactatgtcaaggagcggtacaatagcccaacggtttacatcactgaa 64
|||| ||| |||||||||||||| || | ||||| | ||||| || ||||||||||||
Sbjct: 478 aggaggctcatgaactatgtcaaagatagatacaacactccaactgtctacatcactgaa 419
Query: 65 aatgggatggacgacggcaacagccctttcacctccatccaggacgccctcaaggacagc 124
||||||||||| ||| |||||||||| |||| |||| || || | ||||||||||||
Sbjct: 418 aatgggatggatgacagcaacagccccttcatctccctcaagaaggccctcaaggactca 359
Query: 125 aagaggatcaagtaccacaacggctacctcaacaacgttgctgcctccataaaggaggac 184
|| |||||||| |||||||| | |||||||| || | |||| || |||| |||||||
Sbjct: 358 aaaaggatcaactaccacaatgactacctcacaaatctagctgattctataagggaggac 299
Query: 185 gggtgtgacgtgcgtgggtacttcgcgtggtcgttgctggacaactgggaatgggccgcc 244
|| || || || || ||||| || | |||||| | || ||||| ||||| ||| | ||
Sbjct: 298 ggttgcgatgttcgcgggtattttgtgtggtctcttctcgacaattgggagtggactgct 239
Query: 245 gggtacacctccagattcgggctctacttcgtggactacaaggataacctcaagaggtac 304
|| |||||||| ||||||||| | |||||||||||||||||||||||||||||||| |||
Sbjct: 238 ggatacacctcgagattcgggttgtacttcgtggactacaaggataacctcaagagatac 179
Query: 305 cccaagaactcggtccagtggttcaaga 332
||||||||||| ||||||||||||||||
Sbjct: 178 cccaagaactcagtccagtggttcaaga 151
>gb|BJ240770.1|BJ240770 BJ240770 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe17c10 3', mRNA sequence
Length = 532
Score = 190 bits (96), Expect = 9e-047
Identities = 270/328 (82%)
Strand = Plus / Minus
Query: 5 aggaagctgatgaactatgtcaaggagcggtacaatagcccaacggtttacatcactgaa 64
|||| ||| |||||||||||||| || | ||||| | ||||| || ||||||||||||
Sbjct: 447 aggaggctcatgaactatgtcaaagatagatacaacactccaactgtctacatcactgaa 388
Query: 65 aatgggatggacgacggcaacagccctttcacctccatccaggacgccctcaaggacagc 124
||||||||||| ||| |||||||||| |||| |||| || || | ||||||||||||
Sbjct: 387 aatgggatggatgacagcaacagccccttcatctccctcaagaaggccctcaaggactca 328
Query: 125 aagaggatcaagtaccacaacggctacctcaacaacgttgctgcctccataaaggaggac 184
|| |||||||| |||||||| | |||||||| || | |||| || |||| |||||||
Sbjct: 327 aaaaggatcaactaccacaatgactacctcacaaatctagctgattctataagggaggac 268
Query: 185 gggtgtgacgtgcgtgggtacttcgcgtggtcgttgctggacaactgggaatgggccgcc 244
|| || || || || ||||| || | |||||| | || ||||| ||||| ||| | ||
Sbjct: 267 ggttgcgatgttcgcgggtattttgtgtggtctcttctcgacaattgggagtggactgct 208
Query: 245 gggtacacctccagattcgggctctacttcgtggactacaaggataacctcaagaggtac 304
|| |||||||| ||||||||| | |||||||||||||||||||||||||||||||| |||
Sbjct: 207 ggatacacctcgagattcgggttgtacttcgtggactacaaggataacctcaagagatac 148
Query: 305 cccaagaactcggtccagtggttcaaga 332
||||||||||| ||||||||||||||||
Sbjct: 147 cccaagaactcagtccagtggttcaaga 120
>gb|BJ239251.1|BJ239251 BJ239251 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe5h14 3', mRNA sequence
Length = 685
Score = 165 bits (83), Expect = 5e-039
Identities = 260/319 (81%)
Strand = Plus / Minus
Query: 14 atgaactatgtcaaggagcggtacaatagcccaacggtttacatcactgaaaatgggatg 73
|||||||||||||| || | ||| | | |||||| || ||||||||||||||||| |||
Sbjct: 503 atgaactatgtcaaagatagatacgacaccccaactgtctacatcactgaaaatggaatg 444
Query: 74 gacgacggcaacagccctttcacctccatccaggacgccctcaaggacagcaagaggatc 133
|| ||| |||||||||| |||| |||| || || | |||||||| |||| || || |||
Sbjct: 443 gatgacagcaacagccccttcatctccctcaagaaggccctcaaagacacaaaaagaatc 384
Query: 134 aagtaccacaacggctacctcaacaacgttgctgcctccataaaggaggacgggtgtgac 193
|| |||||||| | |||||||| || | |||| ||||||| |||||| || || ||
Sbjct: 383 aactaccacaatgactacctcacaaatctagctgattccataagggaggatggctgcgat 324
Query: 194 gtgcgtgggtacttcgcgtggtcgttgctggacaactgggaatgggccgccgggtacacc 253
|| || ||||| || | |||||| | || ||||||||||| ||| |||| || ||||||
Sbjct: 323 gttcgcgggtattttgtgtggtctcttctcgacaactgggagtggaccgctggatacacc 264
Query: 254 tccagattcgggctctacttcgtggactacaaggataacctcaagaggtaccccaagaac 313
|| |||||||| | | |||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 263 tcaagattcggtttgttcttcgtagactacaaggataacctcaagagataccccaagaac 204
Query: 314 tcggtccagtggttcaaga 332
|| ||||||||||||||||
Sbjct: 203 tcagtccagtggttcaaga 185
>gb|BJ266139.1|BJ266139 BJ266139 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh24p24 3', mRNA sequence
Length = 666
Score = 165 bits (83), Expect = 5e-039
Identities = 260/319 (81%)
Strand = Plus / Minus
Query: 14 atgaactatgtcaaggagcggtacaatagcccaacggtttacatcactgaaaatgggatg 73
|||||||||||||| || | ||| | | |||||| || ||||||||||||||||| |||
Sbjct: 480 atgaactatgtcaaagatagatacgacaccccaactgtctacatcactgaaaatggaatg 421
Query: 74 gacgacggcaacagccctttcacctccatccaggacgccctcaaggacagcaagaggatc 133
|| ||| |||||||||| |||| |||| || || | |||||||| |||| || || |||
Sbjct: 420 gatgacagcaacagccccttcatctccctcaagaaggccctcaaagacacaaaaagaatc 361
Query: 134 aagtaccacaacggctacctcaacaacgttgctgcctccataaaggaggacgggtgtgac 193
|| |||||||| | |||||||| || | |||| ||||||| |||||| || || ||
Sbjct: 360 aactaccacaatgactacctcacaaatctagctgattccataagggaggatggctgcgat 301
Query: 194 gtgcgtgggtacttcgcgtggtcgttgctggacaactgggaatgggccgccgggtacacc 253
|| || ||||| || | |||||| | || ||||||||||| ||| |||| || ||||||
Sbjct: 300 gttcgcgggtattttgtgtggtctcttctcgacaactgggagtggaccgctggatacacc 241
Query: 254 tccagattcgggctctacttcgtggactacaaggataacctcaagaggtaccccaagaac 313
|| |||||||| | | |||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 240 tcaagattcggtttgttcttcgtagactacaaggataacctcaagagataccccaagaac 181
Query: 314 tcggtccagtggttcaaga 332
|| ||||||||||||||||
Sbjct: 180 tcagtccagtggttcaaga 162
>gb|BJ239461.1|BJ239461 BJ239461 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe6h14 3', mRNA sequence
Length = 378
Score = 121 bits (61), Expect = 7e-026
Identities = 97/109 (88%)
Strand = Plus / Minus
Query: 224 gacaactgggaatgggccgccgggtacacctccagattcgggctctacttcgtggactac 283
||||||||||| ||| |||| || |||||||| |||||||| | | |||||| ||||||
Sbjct: 308 gacaactgggagtggaccgctggatacacctcaagattcggtttgttcttcgtagactac 249
Query: 284 aaggataacctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 248 aaggataacctcaagagataccccaagaactcagtccagtggttcaaga 200
>gb|CA609359.1|CA609359 wr1.pk0106.e4 wr1 Triticum aestivum cDNA clone wr1.pk0106.e4 5'
end, mRNA sequence
Length = 439
Score = 115 bits (58), Expect = 4e-024
Identities = 94/107 (87%)
Strand = Plus / Plus
Query: 242 gccgggtacacctccagattcgggctctacttcgtggactacaaggataacctcaagagg 301
||||||||||| ||||| |||||||||||||||| ||||||||| |||| ||||||||
Sbjct: 5 gccgggtacacgtccaggttcgggctctacttcgnggactacaacgatangctcaagaga 64
Query: 302 taccccaagaactcggtccagtggttcaagaccctgctgagctccag 348
|||||||||| ||| || ||||||||||||| ||| || ||||||||
Sbjct: 65 taccccaagagctccgtgcagtggttcaagancctcctcagctccag 111
>gb|BJ234487.1|BJ234487 BJ234487 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe5h14 5', mRNA sequence
Length = 637
Score = 65.9 bits (33), Expect = 4e-009
Identities = 90/109 (82%)
Strand = Plus / Plus
Query: 14 atgaactatgtcaaggagcggtacaatagcccaacggtttacatcactgaaaatgggatg 73
|||||||||||||| || | ||| | | |||||| || ||||||||||||||||| |||
Sbjct: 527 atgaactatgtcaaagatagatacgacaccccaactgtctacatcactgaaaatggaatg 586
Query: 74 gacgacggcaacagccctttcacctccatccaggacgccctcaaggaca 122
|| ||| |||||||||| |||| |||| || || | |||||||| ||||
Sbjct: 587 gatgacagcaacagccccttcatctccctcaagaaggccctcaaagaca 635
>gb|CA625704.1|CA625704 wl1n.pk0133.c11 wl1n Triticum aestivum cDNA clone wl1n.pk0133.c11
5' end, mRNA sequence
Length = 286
Score = 54.0 bits (27), Expect = 1e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 180 aggacgggtgtgacgtgcgtgggtacttcgcgtggtcgttgctggacaact 230
|||||||| ||| || |||||||||||||||||||| || ||||||||||
Sbjct: 198 aggacggggctgatgtccgtgggtacttcgcgtggtcattcctggacaact 248
>gb|CD913800.1|CD913800 G550.119F02R010920 G550 Triticum aestivum cDNA clone G550119F02,
mRNA sequence
Length = 475
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 200 gggtacttcgcgtggtcgttgctggacaactggga 234
|||||||||| ||||||| ||||||||||||||||
Sbjct: 419 gggtacttcgtgtggtcgctgctggacaactggga 385
>gb|CD894683.1|CD894683 G118.126N14R011119 G118 Triticum aestivum cDNA clone G118126N14,
mRNA sequence
Length = 595
Score = 48.1 bits (24), Expect = 9e-004
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 203 tacttcgcgtggtcgttgctggacaactggga 234
||||||| ||||||| ||||||||||||||||
Sbjct: 379 tacttcgtgtggtcgctgctggacaactggga 348
>gb|CD897190.1|CD897190 G174.105B18F010824 G174 Triticum aestivum cDNA clone G174105B18,
mRNA sequence
Length = 554
Score = 48.1 bits (24), Expect = 9e-004
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 203 tacttcgcgtggtcgttgctggacaactggga 234
||||||| ||||||| ||||||||||||||||
Sbjct: 448 tacttcgtgtggtcgctgctggacaactggga 479
>gb|CD897191.1|CD897191 G174.105B18R011120 G174 Triticum aestivum cDNA clone G174105B18,
mRNA sequence
Length = 763
Score = 48.1 bits (24), Expect = 9e-004
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 203 tacttcgcgtggtcgttgctggacaactggga 234
||||||| ||||||| ||||||||||||||||
Sbjct: 350 tacttcgtgtggtcgctgctggacaactggga 319
>gb|CD490941.1|CD490941 WHE3008_H06_P12ZT Wheat etiolated seedling shoot normalized cDNA
library Triticum aestivum cDNA clone WHE3008_H06_P12,
mRNA sequence
Length = 745
Score = 44.1 bits (22), Expect = 0.013
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 197 cgtgggtacttcgcgtggtcgttgctggacaact 230
||||||||||| |||||||| || ||||||||||
Sbjct: 415 cgtgggtactttgcgtggtcattcctggacaact 382
>gb|BF473283.1|BF473283 WHE0926_F12_K24ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0926_F12_K24, mRNA sequence
Length = 592
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 357 cctcaagcggtaccccaaggactcggcctactggttcaaga 397
>gb|BF483316.1|BF483316 WHE1791_D05_G09ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1791_D05_G09, mRNA sequence
Length = 553
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 449 cctcaagcggtaccccaaggactcggcctactggttcaaga 489
>gb|BM137936.1|BM137936 WHE473_F02_L03ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE473_F02_L03,
mRNA sequence
Length = 242
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 52 cctcaagcggtaccccaaggactcggcctactggttcaaga 92
>gb|BM138675.1|BM138675 WHE0496_E09_I18ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0496_E09_I18,
mRNA sequence
Length = 533
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 335 cctcaagcggtaccccaaggactcggcctactggttcaaga 375
>gb|BJ207110.1|BJ207110 BJ207110 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh2c22 5', mRNA sequence
Length = 598
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 294 cctcaagcggtaccccaaggactcggcctactggttcaaga 334
>gb|BJ208051.1|BJ208051 BJ208051 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh6j23 5', mRNA sequence
Length = 621
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 169 cctcaagcggtaccccaaggactcggcctactggttcaaga 209
>gb|BJ214392.1|BJ214392 BJ214392 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh2c22 3', mRNA sequence
Length = 610
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 435 cctcaagcggtaccccaaggactcggcctactggttcaaga 395
>gb|BJ215331.1|BJ215331 BJ215331 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh6j23 3', mRNA sequence
Length = 468
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 455 cctcaagcggtaccccaaggactcggcctactggttcaaga 415
>gb|BJ218685.1|BJ218685 BJ218685 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh9e23 3', mRNA sequence
Length = 735
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 363 cctcaagcggtaccccaaggactcggcctactggttcaaga 323
>gb|BJ315409.1|BJ315409 BJ315409 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf18e01 5', mRNA sequence
Length = 232
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 182 cctcaagcggtaccccaaggactcggcctactggttcaaga 222
>gb|BJ320914.1|BJ320914 BJ320914 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf18e01 3', mRNA sequence
Length = 541
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 305 cctcaagcggtaccccaaggactcggcctactggttcaaga 265
>gb|CA629271.1|CA629271 wle1n.pk0024.f5 wle1n Triticum aestivum cDNA clone wle1n.pk0024.f5
5' end, mRNA sequence
Length = 370
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 15 cctcaagcggtaccccaaggactcggcctactggttcaaga 55
>gb|CD871802.1|CD871802 AZO2.119B15F010207 AZO2 Triticum aestivum cDNA clone AZO2119B15,
mRNA sequence
Length = 511
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 47 cctcaagcggtaccccaaggactcggcctactggttcaaga 87
>gb|CD894557.1|CD894557 G118.126I10F010823 G118 Triticum aestivum cDNA clone G118126I10,
mRNA sequence
Length = 669
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 417 cctcaagcggtaccccaaggactcggcctactggttcaaga 457
>gb|CD894558.1|CD894558 G118.126I10R011119 G118 Triticum aestivum cDNA clone G118126I10,
mRNA sequence
Length = 629
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 385 cctcaagcggtaccccaaggactcggcctactggttcaaga 345
>gb|CD895053.1|CD895053 G118.127N13R011119 G118 Triticum aestivum cDNA clone G118127N13,
mRNA sequence
Length = 613
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 358 cctcaagcggtaccccaaggactcggcctactggttcaaga 318
>gb|CD930608.1|CD930608 GR45.111N11F010418 GR45 Triticum aestivum cDNA clone GR45111N11,
mRNA sequence
Length = 601
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 488 cctcaagcggtaccccaaggactcggcctactggttcaaga 448
>gb|CD938061.1|CD938061 OV.108P07F010206 OV Triticum aestivum cDNA clone OV108P07, mRNA
sequence
Length = 654
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 288 cctcaagcggtaccccaaggactcggcctactggttcaaga 328
>gb|CK162328.1|CK162328 FGAS014920 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1068
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 129 cctcaagcggtaccccaaggactcggcctactggttcaaga 169
>gb|CK208206.1|CK208206 FGAS019890 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1115
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 651 cctcaagcggtaccccaaggactcggcctactggttcaaga 611
>gb|AL810086.1|AL810086 AL810086 d:15 Triticum aestivum cDNA clone H01_d15_plate_5, mRNA
sequence
Length = 528
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 189 cctcaagcggtaccccaaggactcggcctactggttcaaga 229
>gb|AL810577.1|AL810577 AL810577 e:29 Triticum aestivum cDNA clone F02_e29_plate_4, mRNA
sequence
Length = 565
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 520 cctcaagcggtaccccaaggactcggcctactggttcaaga 560
>gb|AL811907.1|AL811907 AL811907 d:15 Triticum aestivum cDNA clone A03_d15_plate_18, mRNA
sequence
Length = 422
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 189 cctcaagcggtaccccaaggactcggcctactggttcaaga 229
>gb|CV064525.1|CV064525 WNEL12a12 Wheat EST endosperm library Triticum aestivum cDNA clone
WNEL12a12 5' similar to Oryza sativa chromosome 3 BAC
OSJNBa0004L11 genomic sequence, complete sequence, mRNA
sequence
Length = 518
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 132 cctcaagcggtaccccaaggactcggcctactggttcaaga 172
>gb|CV781981.1|CV781981 FGAS076394 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 876
Score = 42.1 bits (21), Expect = 0.053
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 292 cctcaagaggtaccccaagaactcggtccagtggttcaaga 332
||||||| ||||||||||| |||||| | | ||||||||||
Sbjct: 339 cctcaagcggtaccccaaggactcggcctactggttcaaga 379
>gb|CA594383.1|CA594383 wpa1c.pk006.h19 wpa1c Triticum aestivum cDNA clone wpa1c.pk006.h19
5' end, mRNA sequence
Length = 527
Score = 40.1 bits (20), Expect = 0.21
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 203 tacttcgcgtggtcgttgctggacaact 230
|||||||| |||||| ||||||||||||
Sbjct: 279 tacttcgcatggtcgctgctggacaact 306
>gb|CD454581.1|CD454581 WHE2328_C01_F02ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2328_C01_F02, mRNA sequence
Length = 636
Score = 40.1 bits (20), Expect = 0.21
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 203 tacttcgcgtggtcgttgctggacaact 230
|||||||| |||||| ||||||||||||
Sbjct: 346 tacttcgcatggtcgctgctggacaact 319
>gb|CD907429.1|CD907429 G468.106N24F010813 G468 Triticum aestivum cDNA clone G468106N24,
mRNA sequence
Length = 432
Score = 40.1 bits (20), Expect = 0.21
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 296 aagaggtaccccaagaactcggtccagtggttcaagaccctgct 339
||||||||||||||| |||| | | ||||||||||||| ||||
Sbjct: 221 aagaggtaccccaaggactcagccttgtggttcaagaccatgct 264
>gb|CD926767.1|CD926767 GR45.100A06F010302 GR45 Triticum aestivum cDNA clone GR45100A06,
mRNA sequence
Length = 115
Score = 40.1 bits (20), Expect = 0.21
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 305 cccaagaactcggtccagtggttcaaga 332
|||||||| || ||||||||||||||||
Sbjct: 1 cccaagaattcagtccagtggttcaaga 28
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 150,304
Number of Sequences: 636343
Number of extensions: 150304
Number of successful extensions: 46233
Number of sequences better than 0.5: 46
Number of HSP's better than 0.5 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46171
Number of HSP's gapped (non-prelim): 54
length of query: 733
length of database: 367,240,239
effective HSP length: 19
effective length of query: 714
effective length of database: 355,149,722
effective search space: 253576901508
effective search space used: 253576901508
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)