BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2405341.2.2
(1164 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA484335.1|CA484335 WHE4305_C09_E17ZS Wheat meiotic anth... 846 0.0
gb|BQ167741.1|BQ167741 WHE0089_D07_H13ZK Cheyenne wheat end... 517 e-145
gb|BE419339.1|BE419339 WWR06.H1R000101 ITEC WWR Wheat Root ... 488 e-136
gb|BJ311691.1|BJ311691 BJ311691 Y. Ogihara unpublished cDNA... 402 e-110
gb|BE518042.1|BE518042 WHE0806_F02_K04ZS Wheat vernalized c... 398 e-109
gb|BQ236667.1|BQ236667 TaE05028E02F TaE05 Triticum aestivum... 351 7e-095
gb|BE424764.1|BE424764 WHE0089_D07_H13ZS Wheat endosperm cD... 210 2e-052
gb|BQ165933.1|BQ165933 WHE0806_F02_K04ZT Wheat vernalized c... 206 2e-051
gb|CA615193.1|CA615193 wr1.pk178.h4 wr1 Triticum aestivum c... 184 9e-045
gb|CF133432.1|CF133432 WHE4357_H09_P17ZT Wheat meiotic flor... 111 1e-022
gb|CA606239.1|CA606239 wr1.pk0062.e12 wr1 Triticum aestivum... 80 4e-013
gb|CA619740.1|CA619740 wl1n.pk0063.e7 wl1n Triticum aestivu... 48 0.001
gb|CV768479.1|CV768479 FGAS062870 Triticum aestivum FGAS: L... 48 0.001
gb|CA682724.1|CA682724 wlm96.pk0004.g3 wlm96 Triticum aesti... 46 0.005
gb|CA740016.1|CA740016 wet2s.pk001.i12 wet2s Triticum aesti... 44 0.021
gb|CA740037.1|CA740037 wet2s.pk001.g11 wet2s Triticum aesti... 44 0.021
gb|CA740074.1|CA740074 wet2s.pk001.j2 wet2s Triticum aestiv... 44 0.021
gb|CA740104.1|CA740104 wet2s.pk001.n8 wet2s Triticum aestiv... 44 0.021
gb|CA740108.1|CA740108 wet2s.pk001.d15 wet2s Triticum aesti... 44 0.021
gb|CA740349.1|CA740349 wet2s.pk003.h16 wet2s Triticum aesti... 44 0.021
gb|CA740361.1|CA740361 wet2s.pk003.p16 wet2s Triticum aesti... 44 0.021
gb|CA740431.1|CA740431 wet2s.pk002.d7 wet2s Triticum aestiv... 44 0.021
gb|CA740442.1|CA740442 wet2s.pk003.k20 wet2s Triticum aesti... 44 0.021
gb|CA740499.1|CA740499 wet2s.pk002.b7 wet2s Triticum aestiv... 44 0.021
gb|CA740531.1|CA740531 wet2s.pk003.e20 wet2s Triticum aesti... 44 0.021
gb|CA740566.1|CA740566 wet2s.pk002.h10 wet2s Triticum aesti... 44 0.021
gb|CA740575.1|CA740575 wet2s.pk003.p5 wet2s Triticum aestiv... 44 0.021
gb|CA740610.1|CA740610 wet2s.pk002.f4 wet2s Triticum aestiv... 44 0.021
gb|CA740633.1|CA740633 wet2s.pk003.h3 wet2s Triticum aestiv... 44 0.021
gb|CA740671.1|CA740671 wet2s.pk003.n3 wet2s Triticum aestiv... 44 0.021
gb|CA740783.1|CA740783 wet2s.pk004.j15 wet2s Triticum aesti... 44 0.021
gb|CA740871.1|CA740871 wet2s.pk004.l18 wet2s Triticum aesti... 44 0.021
gb|BE413662.1|BE413662 SCU001.G01.R990714 ITEC SCU Wheat En... 42 0.085
gb|BJ207672.1|BJ207672 BJ207672 Y. Ogihara unpublished cDNA... 42 0.085
gb|BJ208399.1|BJ208399 BJ208399 Y. Ogihara unpublished cDNA... 42 0.085
gb|CD453857.1|CD453857 WHE2161_B05_D09ZT Triticum turgidum ... 42 0.085
gb|CK203985.1|CK203985 FGAS012520 Triticum aestivum FGAS: L... 42 0.085
gb|CK204326.1|CK204326 FGAS012862 Triticum aestivum FGAS: L... 42 0.085
gb|BF428709.1|BF428709 WHE1412_D03_H06ZS Wheat drought stre... 40 0.33
gb|BF484706.1|BF484706 WHE2318_G04_M08ZS Wheat pre-anthesis... 40 0.33
gb|BM136273.1|BM136273 WHE2607_F10_L19ZS Wheat Fusarium gra... 40 0.33
gb|BJ266130.1|BJ266130 BJ266130 Y. Ogihara unpublished cDNA... 40 0.33
gb|BJ300624.1|BJ300624 BJ300624 Y. Ogihara unpublished cDNA... 40 0.33
gb|BJ314391.1|BJ314391 BJ314391 Y. Ogihara unpublished cDNA... 40 0.33
gb|BQ804428.1|BQ804428 WHE3554_E08_J16ZS Wheat developing g... 40 0.33
gb|BQ806139.1|BQ806139 WHE3575_C05_E09ZS Wheat developing g... 40 0.33
gb|BJ245814.1|BJ245814 BJ245814 Y. Ogihara unpublished cDNA... 40 0.33
gb|BJ251706.1|BJ251706 BJ251706 Y. Ogihara unpublished cDNA... 40 0.33
gb|BJ271561.1|BJ271561 BJ271561 Y. Ogihara unpublished cDNA... 40 0.33
gb|BJ312481.1|BJ312481 BJ312481 Y. Ogihara unpublished cDNA... 40 0.33
gb|CA603082.1|CA603082 wr1.pk0023.d3 wr1 Triticum aestivum ... 40 0.33
gb|CK161774.1|CK161774 FGAS014348 Triticum aestivum FGAS: L... 40 0.33
gb|CK161775.1|CK161775 FGAS014349 Triticum aestivum FGAS: L... 40 0.33
gb|CV765570.1|CV765570 FGAS059957 Triticum aestivum FGAS: L... 40 0.33
gb|CV766715.1|CV766715 FGAS061102 Triticum aestivum FGAS: L... 40 0.33
gb|CV780337.1|CV780337 FGAS074746 Triticum aestivum FGAS: L... 40 0.33
gb|DN829396.1|DN829396 KUCD01_03_G05_T3 WSWR cDNA library T... 40 0.33
gb|DR741340.1|DR741340 FGAS030396 Triticum aestivum FGAS: L... 40 0.33
>gb|CA484335.1|CA484335 WHE4305_C09_E17ZS Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4305_C09_E17, mRNA sequence
Length = 563
Score = 846 bits (427), Expect = 0.0
Identities = 524/555 (94%), Gaps = 1/555 (0%)
Strand = Plus / Plus
Query: 76 actgtttataaactgcaaatggatgatggcaatgtccttgctttgaaaagaatagtgaaa 135
|||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 10 actgtttataaacttgcaatggatgatggcaatgtctttgccttgaaaagaatagtgaaa 69
Query: 136 acaaatgaagggtctagatcggttctttgatagagaacttgagatattgggaagtgttaa 195
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 acaaatgaaggg-ctagatcggttctttgatagagaacttgagatattgggaagtgttaa 128
Query: 196 acatcgttacttggtcaatcttcgtggttattgcaactctccttcatcaaaacttttgat 255
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 acatcgctatttggtcaatcttcgtggttattgcaactctccttcatcaaaacttttgat 188
Query: 256 atatgattatcttcaaggtggaagcctggatgaagtgctgcatgaaaagtctgaacagtt 315
|||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 189 atatgattatcttccaggtggaagcctggatgaagtgcttcatgaaaaatctgaacagtt 248
Query: 316 ggattgggatgcacgtattaacatcatacttggagctgcaaaaggcttgtcttacttgca 375
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 249 ggattgggatgcacgtattaacattatacttggagctgcaaaaggcttgtcttatttgca 308
Query: 376 tcacgattgttcgcctcgaataatacatcgtgatatcaagtcgagcaacatcttgcttga 435
||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 309 tcatgactgttcgcctcgaataatacatcgtgatattaagtcaagcaacatcttgcttga 368
Query: 436 cggcagttttgaggcccgcgtatcagactttggacttgcaaagcttttagaggacgaaga 495
|||| |||||||||||| || || ||||||||||||||||||||||||||||| |||||
Sbjct: 369 tggcaattttgaggcccgtgtgtcggactttggacttgcaaagcttttagaggatgaaga 428
Query: 496 atcccatatcactacaatagttgcaggaacatttggttatcttgcgccagagtatatgca 555
||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 429 atcacatattactacaatagttgcaggaacatttggttatcttgcaccagagtatatgca 488
Query: 556 gtttggcagagccaccgagaagaccgatgtctacagttttggggttctggtacttgaaat 615
||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 489 atttggcagagccaccgagaagactgatgtctacagttttggggttttggtacttgaaat 548
Query: 616 actcagcggaaagcg 630
||| || ||||||||
Sbjct: 549 acttagtggaaagcg 563
>gb|BQ167741.1|BQ167741 WHE0089_D07_H13ZK Cheyenne wheat endosperm cDNA library Triticum
aestivum cDNA clone WHE0089_D07_H13, mRNA sequence
Length = 566
Score = 517 bits (261), Expect = e-145
Identities = 466/533 (87%), Gaps = 1/533 (0%)
Strand = Plus / Plus
Query: 22 aagaagctagagactatggatgaagaaaatatcattggagcaggaggcttcggaactgtt 81
|||||| ||||||| |||||||| |||||||||||||||||||| ||||| || || ||
Sbjct: 35 aagaagttagagaccatggatgaggaaaatatcattggagcagggggctttgggaccgtg 94
Query: 82 tataaactgcaaatggatgatggcaatgtccttgctttgaaaagaatagtgaaaacaaat 141
|||||||| |||||||||||| || || |||| |||||||| |||||||||||||||
Sbjct: 95 tataaacttgcaatggatgatggtaacgtttttgcattgaaaaggatagtgaaaacaaat 154
Query: 142 gaagggtctagatcggttctttgatagagaacttgagatattgggaagtgttaaacatcg 201
|| ||| | || |||||||||||||||||| ||||||||||||||||||| || ||
Sbjct: 155 gaggggcgt-gacaaattctttgatagagaacttaagatattgggaagtgttaagcaccg 213
Query: 202 ttacttggtcaatcttcgtggttattgcaactctccttcatcaaaacttttgatatatga 261
| | ||||||||||| ||||| |||||||| || |||||||| ||||| |||||||||||
Sbjct: 214 taatttggtcaatctccgtggctattgcaattccccttcatcgaaactgttgatatatga 273
Query: 262 ttatcttcaaggtggaagcctggatgaagtgctgcatgaaaagtctgaacagttggattg 321
|| |||| |||||||||||||||||||||||| |||||||| |||| |||||||| ||
Sbjct: 274 ctaccttccaggtggaagcctggatgaagtgctacatgaaaaaactgagcagttggaatg 333
Query: 322 ggatgcacgtattaacatcatacttggagctgcaaaaggcttgtcttacttgcatcacga 381
||| ||||| |||||||| ||||||||||||||||||||| || ||||||||||||| ||
Sbjct: 334 ggaggcacgcattaacataatacttggagctgcaaaaggcctggcttacttgcatcatga 393
Query: 382 ttgttcgcctcgaataatacatcgtgatatcaagtcgagcaacatcttgcttgacggcag 441
||| || ||||||||||||||||||||||| ||||||||||| ||||| || |||||||
Sbjct: 394 ttgctcacctcgaataatacatcgtgatattaagtcgagcaatatcttactggacggcaa 453
Query: 442 ttttgaggcccgcgtatcagactttggacttgcaaagcttttagaggacgaagaatccca 501
||||||||| || ||||||||||| |||||||||||||| | ||||| |||||||| ||
Sbjct: 454 ttttgaggcacgtgtatcagacttcggacttgcaaagctactggaggatgaagaatctca 513
Query: 502 tatcactacaatagttgcaggaacatttggttatcttgcgccagagtatatgc 554
||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 514 tattactacaatagttgcaggaacatttggatatcttgcgccagagtatatgc 566
>gb|BE419339.1|BE419339 WWR06.H1R000101 ITEC WWR Wheat Root Library Triticum aestivum cDNA
clone WWR06.H1, mRNA sequence
Length = 648
Score = 488 bits (246), Expect = e-136
Identities = 430/490 (87%), Gaps = 1/490 (0%)
Strand = Plus / Plus
Query: 120 gaaaagaatagtgaaaacaaatgaagggtctagatcggttctttgatagagaacttgaga 179
|||||| ||||||||||||||||||||| | || ||||||||||||||||||||||
Sbjct: 7 gaaaaggatagtgaaaacaaatgaagggcgt-gacaaattctttgatagagaacttgaga 65
Query: 180 tattgggaagtgttaaacatcgttacttggtcaatcttcgtggttattgcaactctcctt 239
|||||||||||||||| || ||| | ||||||||||| ||||| |||||||| || ||||
Sbjct: 66 tattgggaagtgttaagcaccgtaatttggtcaatctccgtggctattgcaattcccctt 125
Query: 240 catcaaaacttttgatatatgattatcttcaaggtggaagcctggatgaagtgctgcatg 299
|||| ||||| ||||||||||| || |||| |||||||||||||||||||||||| ||||
Sbjct: 126 catcgaaactgttgatatatgactaccttccaggtggaagcctggatgaagtgctacatg 185
Query: 300 aaaagtctgaacagttggattgggatgcacgtattaacatcatacttggagctgcaaaag 359
|||| |||| |||||||| ||||| ||||| |||||||| |||||||||||||||||||
Sbjct: 186 aaaaaactgagcagttggaatgggaggcacgcattaacataatacttggagctgcaaaag 245
Query: 360 gcttgtcttacttgcatcacgattgttcgcctcgaataatacatcgtgatatcaagtcga 419
|| || ||||||||||||| ||||| || ||||||||||||||||||||||| |||||||
Sbjct: 246 gcctggcttacttgcatcatgattgctcacctcgaataatacatcgtgatattaagtcga 305
Query: 420 gcaacatcttgcttgacggcagttttgaggcccgcgtatcagactttggacttgcaaagc 479
|||| ||||| || ||||||| ||||||||| || ||||||||||| ||||||||||| |
Sbjct: 306 gcaatatcttactggacggcaattttgaggcacgtgtatcagacttcggacttgcaaaac 365
Query: 480 ttttagaggacgaagaatcccatatcactacaatagttgcaggaacatttggttatcttg 539
| | ||||| |||||||| ||||| |||||||||||||||||||||||||| |||||||
Sbjct: 366 tactggaggatgaagaatctcatattactacaatagttgcaggaacatttggatatcttg 425
Query: 540 cgccagagtatatgcagtttggcagagccaccgagaagaccgatgtctacagttttgggg 599
| |||||||||||||| |||||| || ||||| ||||| ||||||||||||||||| |
Sbjct: 426 ccccagagtatatgcaaagtggcagggctaccgaaaagacggatgtctacagttttggag 485
Query: 600 ttctggtact 609
|| |||||||
Sbjct: 486 ttttggtact 495
>gb|BJ311691.1|BJ311691 BJ311691 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd28p06 3', mRNA sequence
Length = 603
Score = 402 bits (203), Expect = e-110
Identities = 326/367 (88%)
Strand = Plus / Minus
Query: 279 gcctggatgaagtgctgcatgaaaagtctgaacagttggattgggatgcacgtattaaca 338
|||||||||||||||| |||||||| |||| |||||||| ||||| ||||| |||||||
Sbjct: 603 gcctggatgaagtgctacatgaaaaaactgagcagttggaatgggaggcacgcattaaca 544
Query: 339 tcatacttggagctgcaaaaggcttgtcttacttgcatcacgattgttcgcctcgaataa 398
| ||||||||||||||||||||| || ||||||||||||| ||||| || ||||||||||
Sbjct: 543 taatacttggagctgcaaaaggcctggcttacttgcatcatgattgctcacctcgaataa 484
Query: 399 tacatcgtgatatcaagtcgagcaacatcttgcttgacggcagttttgaggcccgcgtat 458
||||||||||||| ||||||||||| ||||| || ||||||| ||||||||| || ||||
Sbjct: 483 tacatcgtgatattaagtcgagcaatatcttactggacggcaattttgaggcacgtgtat 424
Query: 459 cagactttggacttgcaaagcttttagaggacgaagaatcccatatcactacaatagttg 518
||||||| |||||||||||||| | ||||| |||||||| ||||| |||||||||||||
Sbjct: 423 cagacttcggacttgcaaagctactggaggatgaagaatctcatattactacaatagttg 364
Query: 519 caggaacatttggttatcttgcgccagagtatatgcagtttggcagagccaccgagaaga 578
||||||||||||| ||||||||||||||||||||||| |||||| |||||||| ||||
Sbjct: 363 caggaacatttggatatcttgcgccagagtatatgcaaagtggcagggccaccgaaaaga 304
Query: 579 ccgatgtctacagttttggggttctggtacttgaaatactcagcggaaagcgacctaccg 638
| ||||| ||||||||||| ||| ||||||| || ||||| ||||||||||||||||| |
Sbjct: 303 cggatgtatacagttttggagttttggtactcgagatactgagcggaaagcgacctactg 244
Query: 639 atgcatc 645
|||||||
Sbjct: 243 atgcatc 237
Score = 48.1 bits (24), Expect = 0.001
Identities = 44/48 (91%), Gaps = 2/48 (4%)
Strand = Plus / Minus
Query: 919 tgccgctagtttccc-gtggaggcgcattcc-tttattctttgcagat 964
||||||| ||||||| |||||||| |||||| ||||||||||||||||
Sbjct: 181 tgccgctggtttccctgtggaggcacattccatttattctttgcagat 134
>gb|BE518042.1|BE518042 WHE0806_F02_K04ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0806_F02_K04, mRNA sequence
Length = 463
Score = 398 bits (201), Expect = e-109
Identities = 369/425 (86%)
Strand = Plus / Plus
Query: 218 cgtggttattgcaactctccttcatcaaaacttttgatatatgattatcttcaaggtgga 277
||||| ||| |||| || |||||||| ||||| ||||||||||| || |||| | |||||
Sbjct: 38 cgtggctatcgcaattccccttcatcgaaactgttgatatatgactaccttccaagtgga 97
Query: 278 agcctggatgaagtgctgcatgaaaagtctgaacagttggattgggatgcacgtattaac 337
| |||| ||||| |||| |||||||| |||| |||||||| ||||| ||||| ||||||
Sbjct: 98 aacctgtatgaattgctacatgaaaaaactgagcagttggaatgggaggcacgcattaac 157
Query: 338 atcatacttggagctgcaaaaggcttgtcttacttgcatcacgattgttcgcctcgaata 397
|| ||||||||||||||||||||| || ||||||||||||| ||||| || |||||||||
Sbjct: 158 ataatacttggagctgcaaaaggcctggcttacttgcatcatgattgctcacctcgaata 217
Query: 398 atacatcgtgatatcaagtcgagcaacatcttgcttgacggcagttttgaggcccgcgta 457
|||||||||||||| ||||||||||| ||||| || ||| ||| ||||||||| || |||
Sbjct: 218 atacatcgtgatattaagtcgagcaatatcttactggacagcaattttgaggcacgtgta 277
Query: 458 tcagactttggacttgcaaagcttttagaggacgaagaatcccatatcactacaatagtt 517
|||||||| ||||||||||| || | ||||| |||||||| ||||| ||||||||||||
Sbjct: 278 tcagacttcggacttgcaaaactactggaggatgaagaatctcatattactacaatagtt 337
Query: 518 gcaggaacatttggttatcttgcgccagagtatatgcagtttggcagagccaccgagaag 577
|||||||||||||| |||||||| |||||||||||||| |||||| || ||||| |||
Sbjct: 338 gcaggaacatttggatatcttgccccagagtatatgcaaagtggcagggctaccgaaaag 397
Query: 578 accgatgtctacagttttggggttctggtacttgaaatactcagcggaaagcgacctacc 637
|| ||||||||||||||||| ||||||||||| || ||||| |||||||||||||||||
Sbjct: 398 acggatgtctacagttttggagttctggtactcgagatactgagcggaaagcgacctact 457
Query: 638 gatgc 642
|||||
Sbjct: 458 gatgc 462
>gb|BQ236667.1|BQ236667 TaE05028E02F TaE05 Triticum aestivum cDNA clone TaE05028E02F, mRNA
sequence
Length = 632
Score = 351 bits (177), Expect = 7e-095
Identities = 312/357 (87%)
Strand = Plus / Minus
Query: 536 cttgcgccagagtatatgcagtttggcagagccaccgagaagaccgatgtctacagtttt 595
|||||||||||||||||||| |||||| |||||||| ||||| ||||| |||||||||
Sbjct: 632 cttgcgccagagtatatgcaaagtggcagggccaccgaaaagacggatgtatacagtttt 573
Query: 596 ggggttctggtacttgaaatactcagcggaaagcgacctaccgatgcatccttcattgag 655
|| ||| ||||||| || ||||| ||||||||||||||||| |||||||| |||||||||
Sbjct: 572 ggagttttggtactcgagatactgagcggaaagcgacctactgatgcatcattcattgag 513
Query: 656 aagggattaaacattgttggatggttaaattttctggctggcgagaaccgggagagggaa 715
||||| || ||||||||||||||| | || || ||||||| |||| | | ||| ||||
Sbjct: 512 aaggggttgaacattgttggatggctgaacttcttggctggagagagcagagagcgggag 453
Query: 716 atcgtcgatctgaattgtgaaggagtgcacaccgagaccttggacgctctgctctctctc 775
||||| |||| | |||| || || ||||| | ||||||| ||||||| ||||||||||||
Sbjct: 452 atcgtggatccggattgcgacggcgtgcagatcgagaccctggacgccctgctctctctc 393
Query: 776 gccaagcagtgtgtcagctctttgccggaggagcggccgacgatgcacagggtggtacag 835
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gccaagcaatgtgtgagctctttgccggaggagcggccgacgatgcacagggtggtacag 333
Query: 836 atgctggagtcggatgtaattacgccgtgccctagcgacttctacgattcagagtag 892
||||||||||||||||||||||| |||||| || || ||||||||||||||||||
Sbjct: 332 atgctggagtcggatgtaattacaccgtgcggcagtgatttctacgattcagagtag 276
Score = 48.1 bits (24), Expect = 0.001
Identities = 44/48 (91%), Gaps = 2/48 (4%)
Strand = Plus / Minus
Query: 919 tgccgctagtttccc-gtggaggcgcattcc-tttattctttgcagat 964
||||||| ||||||| |||||||| |||||| ||||||||||||||||
Sbjct: 193 tgccgctggtttccctgtggaggcacattccatttattctttgcagat 146
>gb|BE424764.1|BE424764 WHE0089_D07_H13ZS Wheat endosperm cDNA library Triticum aestivum
cDNA clone WHE0089_D07_H13, mRNA sequence
Length = 450
Score = 210 bits (106), Expect = 2e-052
Identities = 163/182 (89%)
Strand = Plus / Minus
Query: 711 gggaaatcgtcgatctgaattgtgaaggagtgcacaccgagaccttggacgctctgctct 770
|||| ||||| |||| | |||| || || ||||| | ||||||| ||||||| |||||||
Sbjct: 432 gggagatcgtggatccggattgcgacggcgtgcagatcgagaccctggacgccctgctct 373
Query: 771 ctctcgccaagcagtgtgtcagctctttgccggaggagcggccgacgatgcacagggtgg 830
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ctctcgccaagcaatgtgtgagctctttgccggaggagcggccgacgatgcacagggtgg 313
Query: 831 tacagatgctggagtcggatgtaattacgccgtgccctagcgacttctacgattcagagt 890
|||||||||||||||||||||||||||| |||||| || || ||||||||||||||||
Sbjct: 312 tacagatgctggagtcggatgtaattacaccgtgcggcagtgatttctacgattcagagt 253
Query: 891 ag 892
||
Sbjct: 252 ag 251
Score = 48.1 bits (24), Expect = 0.001
Identities = 44/48 (91%), Gaps = 2/48 (4%)
Strand = Plus / Minus
Query: 919 tgccgctagtttccc-gtggaggcgcattcc-tttattctttgcagat 964
||||||| ||||||| |||||||| |||||| ||||||||||||||||
Sbjct: 168 tgccgctggtttccctgtggaggcacattccatttattctttgcagat 121
>gb|BQ165933.1|BQ165933 WHE0806_F02_K04ZT Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0806_F02_K04, mRNA sequence
Length = 547
Score = 206 bits (104), Expect = 2e-051
Identities = 197/228 (86%)
Strand = Plus / Minus
Query: 665 aacattgttggatggttaaattttctggctggcgagaaccgggagagggaaatcgtcgat 724
||||||||||||||| |||| || ||||||| |||| | | ||| |||| || || |||
Sbjct: 546 aacattgttggatggctaaacttcttggctggagagagcagagagcgggagattgtggat 487
Query: 725 ctgaattgtgaaggagtgcacaccgagaccttggacgctctgctctctctcgccaagcag 784
| | |||| || || ||||| | ||||||| ||||||| ||||||||||||||||||||
Sbjct: 486 ccggattgcgacggcgtgcagatcgagaccctggacgccctgctctctctcgccaagcaa 427
Query: 785 tgtgtcagctctttgccggaggagcggccgacgatgcacagggtggtacagatgctggag 844
|| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 426 tgcgtgagctctttgccggaggagcggccgacgatgcatagggtggtacagatgctggag 367
Query: 845 tcggatgtaattacgccgtgccctagcgacttctacgattcagagtag 892
|||||||||||||| |||||| || || ||||||||||||||||||
Sbjct: 366 tcggatgtaattacaccgtgcggaagtgatttctacgattcagagtag 319
Score = 46.1 bits (23), Expect = 0.005
Identities = 56/63 (88%), Gaps = 3/63 (4%)
Strand = Plus / Minus
Query: 919 tgccgctagtttccc-gtggaggcgcattcc-tttattctttgcagatattgtgtaaatg 976
||||||| ||||||| |||||||| |||||| |||| ||||||||||| || ||||||||
Sbjct: 236 tgccgctggtttccctgtggaggcacattccatttagtctttgcagat-ttttgtaaatg 178
Query: 977 cat 979
|||
Sbjct: 177 cat 175
>gb|CA615193.1|CA615193 wr1.pk178.h4 wr1 Triticum aestivum cDNA clone wr1.pk178.h4 5' end,
mRNA sequence
Length = 490
Score = 184 bits (93), Expect = 9e-045
Identities = 132/145 (91%)
Strand = Plus / Plus
Query: 748 cgagaccttggacgctctgctctctctcgccaagcagtgtgtcagctctttgccggagga 807
||||||| ||||||| |||||||||||||||||||| || || |||||||||||||||||
Sbjct: 61 cgagaccctggacgccctgctctctctcgccaagcaatgcgtgagctctttgccggagga 120
Query: 808 gcggccgacgatgcacagggtggtacagatgctggagtcggatgtaattacgccgtgccc 867
||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 121 gcgtccgacgatgcatagggtggtacagatgctggagtcggatgtaattacaccgtgcgg 180
Query: 868 tagcgacttctacgattcagagtag 892
|| || ||||||||||||||||||
Sbjct: 181 cagtgatttctacgattcagagtag 205
Score = 48.1 bits (24), Expect = 0.001
Identities = 56/63 (88%), Gaps = 3/63 (4%)
Strand = Plus / Plus
Query: 919 tgccgctagtttccc-gtggaggcgcattcc-tttattctttgcagatattgtgtaaatg 976
||||||| ||||||| |||||||| |||||| ||||||| |||||||| || ||||||||
Sbjct: 288 tgccgctggtttccctgtggaggcacattccatttattcnttgcagat-ttttgtaaatg 346
Query: 977 cat 979
|||
Sbjct: 347 cat 349
>gb|CF133432.1|CF133432 WHE4357_H09_P17ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4357_H09_P17, mRNA sequence
Length = 626
Score = 111 bits (56), Expect = 1e-022
Identities = 119/140 (85%)
Strand = Plus / Plus
Query: 8 caaaagacatactcaagaagctagagactatggatgaagaaaatatcattggagcaggag 67
||||||| || || |||||| |||||| |||||||| |||||||||||||||||||| |
Sbjct: 459 caaaagatatccttaagaagttagagatcatggatgaggaaaatatcattggagcagggg 518
Query: 68 gcttcggaactgtttataaactgcaaatggatgatggcaatgtccttgctttgaaaagaa 127
| || || ||||| || ||||| ||||||||||||||| || |||| |||||||| |
Sbjct: 519 gttttgggactgtgtacaaacttgcaatggatgatggcaacgtttttgcattgaaaagga 578
Query: 128 tagtgaaaacaaatgaaggg 147
||||||||||||||||||||
Sbjct: 579 tagtgaaaacaaatgaaggg 598
>gb|CA606239.1|CA606239 wr1.pk0062.e12 wr1 Triticum aestivum cDNA clone wr1.pk0062.e12 5'
end, mRNA sequence
Length = 619
Score = 79.8 bits (40), Expect = 4e-013
Identities = 62/67 (92%), Gaps = 2/67 (2%)
Strand = Plus / Minus
Query: 800 ccggaggagcggccgacgatgcacagggtggtacagatgct-ggagtcggatgtaattac 858
|||||||| |||||||||||||| ||||||||||||||||| |||||| |||||||||||
Sbjct: 368 ccggagga-cggccgacgatgcatagggtggtacagatgctgggagtcngatgtaattac 310
Query: 859 gccgtgc 865
||||||
Sbjct: 309 accgtgc 303
Score = 56.0 bits (28), Expect = 6e-006
Identities = 57/63 (90%), Gaps = 3/63 (4%)
Strand = Plus / Minus
Query: 919 tgccgctagtttccc-gtggaggcgcattcc-tttattctttgcagatattgtgtaaatg 976
||||||| ||||||| |||||||| |||||| |||||||||||||||| || ||||||||
Sbjct: 194 tgccgctggtttccctgtggaggcacattccatttattctttgcagatntt-tgtaaatg 136
Query: 977 cat 979
|||
Sbjct: 135 cat 133
>gb|CA619740.1|CA619740 wl1n.pk0063.e7 wl1n Triticum aestivum cDNA clone wl1n.pk0063.e7 5'
end, mRNA sequence
Length = 320
Score = 48.1 bits (24), Expect = 0.001
Identities = 44/48 (91%), Gaps = 2/48 (4%)
Strand = Plus / Plus
Query: 919 tgccgctagtttccc-gtggaggcgcattcc-tttattctttgcagat 964
||||||| ||||||| |||||||| |||||| ||||||||||||||||
Sbjct: 118 tgccgctggtttccctgtggaggcacattccatttattctttgcagat 165
>gb|CV768479.1|CV768479 FGAS062870 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 848
Score = 48.1 bits (24), Expect = 0.001
Identities = 44/48 (91%), Gaps = 2/48 (4%)
Strand = Plus / Plus
Query: 919 tgccgctagtttccc-gtggaggcgcattcc-tttattctttgcagat 964
||||||| ||||||| |||||||| |||||| ||||||||||||||||
Sbjct: 245 tgccgctggtttccctgtggaggcacattccatttattctttgcagat 292
Score = 44.1 bits (22), Expect = 0.021
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 838 gctggagtcggatgtaattacgccgtgccctagcgacttctacgattcagagta 891
||||||||||||| |||||| |||||| || || |||||||||||||||||
Sbjct: 108 gctggagtcggatccaattacaccgtgcggcagtgatttctacgattcagagta 161
>gb|CA682724.1|CA682724 wlm96.pk0004.g3 wlm96 Triticum aestivum cDNA clone wlm96.pk0004.g3
5' end, mRNA sequence
Length = 571
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 458 tcagactttggacttgcaaagct 480
|||||||||||||||||||||||
Sbjct: 148 tcagactttggacttgcaaagct 170
>gb|CA740016.1|CA740016 wet2s.pk001.i12 wet2s Triticum aestivum cDNA clone wet2s.pk001.i12
5' end, mRNA sequence
Length = 525
Score = 44.1 bits (22), Expect = 0.021
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 748 cgagaccttggacgctctgctctctctcgc 777
||||||| ||||||| ||||||||||||||
Sbjct: 42 cgagaccctggacgccctgctctctctcgc 71
>gb|CA740037.1|CA740037 wet2s.pk001.g11 wet2s Triticum aestivum cDNA clone wet2s.pk001.g11
5' end, mRNA sequence
Length = 519
Score = 44.1 bits (22), Expect = 0.021
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 748 cgagaccttggacgctctgctctctctcgc 777
||||||| ||||||| ||||||||||||||
Sbjct: 42 cgagaccctggacgccctgctctctctcgc 71
>gb|CA740074.1|CA740074 wet2s.pk001.j2 wet2s Triticum aestivum cDNA clone wet2s.pk001.j2 5'
end, mRNA sequence
Length = 523
Score = 44.1 bits (22), Expect = 0.021
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 748 cgagaccttggacgctctgctctctctcgc 777
||||||| ||||||| ||||||||||||||
Sbjct: 42 cgagaccctggacgccctgctctctctcgc 71
>gb|CA740104.1|CA740104 wet2s.pk001.n8 wet2s Triticum aestivum cDNA clone wet2s.pk001.n8 5'
end, mRNA sequence
Length = 524
Score = 44.1 bits (22), Expect = 0.021
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 748 cgagaccttggacgctctgctctctctcgc 777
||||||| ||||||| ||||||||||||||
Sbjct: 42 cgagaccctggacgccctgctctctctcgc 71
>gb|CA740108.1|CA740108 wet2s.pk001.d15 wet2s Triticum aestivum cDNA clone wet2s.pk001.d15
5' end, mRNA sequence
Length = 523
Score = 44.1 bits (22), Expect = 0.021
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 748 cgagaccttggacgctctgctctctctcgc 777
||||||| ||||||| ||||||||||||||
Sbjct: 42 cgagaccctggacgccctgctctctctcgc 71
>gb|CA740349.1|CA740349 wet2s.pk003.h16 wet2s Triticum aestivum cDNA clone wet2s.pk003.h16
5' end, mRNA sequence
Length = 520
Score = 44.1 bits (22), Expect = 0.021
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 748 cgagaccttggacgctctgctctctctcgc 777
||||||| ||||||| ||||||||||||||
Sbjct: 42 cgagaccctggacgccctgctctctctcgc 71
>gb|CA740361.1|CA740361 wet2s.pk003.p16 wet2s Triticum aestivum cDNA clone wet2s.pk003.p16
5' end, mRNA sequence
Length = 523
Score = 44.1 bits (22), Expect = 0.021
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 748 cgagaccttggacgctctgctctctctcgc 777
||||||| ||||||| ||||||||||||||
Sbjct: 42 cgagaccctggacgccctgctctctctcgc 71
>gb|CA740431.1|CA740431 wet2s.pk002.d7 wet2s Triticum aestivum cDNA clone wet2s.pk002.d7 5'
end, mRNA sequence
Length = 519
Score = 44.1 bits (22), Expect = 0.021
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 748 cgagaccttggacgctctgctctctctcgc 777
||||||| ||||||| ||||||||||||||
Sbjct: 42 cgagaccctggacgccctgctctctctcgc 71
>gb|CA740442.1|CA740442 wet2s.pk003.k20 wet2s Triticum aestivum cDNA clone wet2s.pk003.k20
5' end, mRNA sequence
Length = 520
Score = 44.1 bits (22), Expect = 0.021
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 748 cgagaccttggacgctctgctctctctcgc 777
||||||| ||||||| ||||||||||||||
Sbjct: 42 cgagaccctggacgccctgctctctctcgc 71
>gb|CA740499.1|CA740499 wet2s.pk002.b7 wet2s Triticum aestivum cDNA clone wet2s.pk002.b7 5'
end, mRNA sequence
Length = 518
Score = 44.1 bits (22), Expect = 0.021
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 748 cgagaccttggacgctctgctctctctcgc 777
||||||| ||||||| ||||||||||||||
Sbjct: 42 cgagaccctggacgccctgctctctctcgc 71
>gb|CA740531.1|CA740531 wet2s.pk003.e20 wet2s Triticum aestivum cDNA clone wet2s.pk003.e20
5' end, mRNA sequence
Length = 519
Score = 44.1 bits (22), Expect = 0.021
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 748 cgagaccttggacgctctgctctctctcgc 777
||||||| ||||||| ||||||||||||||
Sbjct: 42 cgagaccctggacgccctgctctctctcgc 71
>gb|CA740566.1|CA740566 wet2s.pk002.h10 wet2s Triticum aestivum cDNA clone wet2s.pk002.h10
5' end, mRNA sequence
Length = 522
Score = 44.1 bits (22), Expect = 0.021
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 748 cgagaccttggacgctctgctctctctcgc 777
||||||| ||||||| ||||||||||||||
Sbjct: 42 cgagaccctggacgccctgctctctctcgc 71
>gb|CA740575.1|CA740575 wet2s.pk003.p5 wet2s Triticum aestivum cDNA clone wet2s.pk003.p5 5'
end, mRNA sequence
Length = 522
Score = 44.1 bits (22), Expect = 0.021
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 748 cgagaccttggacgctctgctctctctcgc 777
||||||| ||||||| ||||||||||||||
Sbjct: 42 cgagaccctggacgccctgctctctctcgc 71
>gb|CA740610.1|CA740610 wet2s.pk002.f4 wet2s Triticum aestivum cDNA clone wet2s.pk002.f4 5'
end, mRNA sequence
Length = 518
Score = 44.1 bits (22), Expect = 0.021
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 748 cgagaccttggacgctctgctctctctcgc 777
||||||| ||||||| ||||||||||||||
Sbjct: 42 cgagaccctggacgccctgctctctctcgc 71
>gb|CA740633.1|CA740633 wet2s.pk003.h3 wet2s Triticum aestivum cDNA clone wet2s.pk003.h3 5'
end, mRNA sequence
Length = 587
Score = 44.1 bits (22), Expect = 0.021
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 748 cgagaccttggacgctctgctctctctcgc 777
||||||| ||||||| ||||||||||||||
Sbjct: 201 cgagaccctggacgccctgctctctctcgc 230
>gb|CA740671.1|CA740671 wet2s.pk003.n3 wet2s Triticum aestivum cDNA clone wet2s.pk003.n3 5'
end, mRNA sequence
Length = 520
Score = 44.1 bits (22), Expect = 0.021
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 748 cgagaccttggacgctctgctctctctcgc 777
||||||| ||||||| ||||||||||||||
Sbjct: 42 cgagaccctggacgccctgctctctctcgc 71
>gb|CA740783.1|CA740783 wet2s.pk004.j15 wet2s Triticum aestivum cDNA clone wet2s.pk004.j15
5' end, mRNA sequence
Length = 676
Score = 44.1 bits (22), Expect = 0.021
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 748 cgagaccttggacgctctgctctctctcgc 777
||||||| ||||||| ||||||||||||||
Sbjct: 607 cgagaccctggacgccctgctctctctcgc 636
>gb|CA740871.1|CA740871 wet2s.pk004.l18 wet2s Triticum aestivum cDNA clone wet2s.pk004.l18
5' end, mRNA sequence
Length = 518
Score = 44.1 bits (22), Expect = 0.021
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 748 cgagaccttggacgctctgctctctctcgc 777
||||||| ||||||| ||||||||||||||
Sbjct: 42 cgagaccctggacgccctgctctctctcgc 71
>gb|BE413662.1|BE413662 SCU001.G01.R990714 ITEC SCU Wheat Endosperm Library Triticum
aestivum cDNA clone SCU001.G01, mRNA sequence
Length = 713
Score = 42.1 bits (21), Expect = 0.085
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 571 cgagaagaccgatgtctacag 591
|||||||||||||||||||||
Sbjct: 655 cgagaagaccgatgtctacag 675
>gb|BJ207672.1|BJ207672 BJ207672 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh4n13 5', mRNA sequence
Length = 464
Score = 42.1 bits (21), Expect = 0.085
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 399 tacatcgtgatatcaagtcgagcaacatcttgcttga 435
|||| |||||||| ||||| |||||||||||| ||||
Sbjct: 143 tacaccgtgatataaagtcaagcaacatcttgattga 179
>gb|BJ208399.1|BJ208399 BJ208399 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh8b18 5', mRNA sequence
Length = 638
Score = 42.1 bits (21), Expect = 0.085
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 399 tacatcgtgatatcaagtcgagcaacatcttgcttga 435
|||| |||||||| ||||| |||||||||||| ||||
Sbjct: 566 tacaccgtgatataaagtcaagcaacatcttgattga 602
>gb|CD453857.1|CD453857 WHE2161_B05_D09ZT Triticum turgidum L. var. durum (durum wheat)
Langdon-16 whole plant cDNA library Triticum turgidum
cDNA clone WHE2161_B05_D09, mRNA sequence
Length = 721
Score = 42.1 bits (21), Expect = 0.085
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 581 gatgtctacagttttggggtt 601
|||||||||||||||||||||
Sbjct: 498 gatgtctacagttttggggtt 478
>gb|CK203985.1|CK203985 FGAS012520 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 882
Score = 42.1 bits (21), Expect = 0.085
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 509 acaatagttgcaggaacatttggttatcttgcgccagagta 549
|||| ||||||||| ||||||||||| ||||| || |||||
Sbjct: 148 acaaaagttgcaggcacatttggttaccttgcacctgagta 188
>gb|CK204326.1|CK204326 FGAS012862 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 845
Score = 42.1 bits (21), Expect = 0.085
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 509 acaatagttgcaggaacatttggttatcttgcgccagagta 549
|||| ||||||||| ||||||||||| ||||| || |||||
Sbjct: 149 acaaaagttgcaggcacatttggttaccttgcacctgagta 189
>gb|BF428709.1|BF428709 WHE1412_D03_H06ZS Wheat drought stressed leaf cDNA library Triticum
aestivum cDNA clone WHE1412_D03_H06, mRNA sequence
Length = 375
Score = 40.1 bits (20), Expect = 0.33
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 571 cgagaagaccgatgtctacagttt 594
|||||||| |||||||||||||||
Sbjct: 72 cgagaagagcgatgtctacagttt 95
>gb|BF484706.1|BF484706 WHE2318_G04_M08ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2318_G04_M08, mRNA sequence
Length = 335
Score = 40.1 bits (20), Expect = 0.33
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 571 cgagaagaccgatgtctacagttt 594
|||||||| |||||||||||||||
Sbjct: 122 cgagaagagcgatgtctacagttt 145
>gb|BM136273.1|BM136273 WHE2607_F10_L19ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE2607_F10_L19,
mRNA sequence
Length = 566
Score = 40.1 bits (20), Expect = 0.33
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 343 acttggagctgcaaaaggct 362
||||||||||||||||||||
Sbjct: 105 acttggagctgcaaaaggct 124
>gb|BJ266130.1|BJ266130 BJ266130 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh24p09 3', mRNA sequence
Length = 602
Score = 40.1 bits (20), Expect = 0.33
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 809 cggccgacgatgcacagggtggtacagatgctggag 844
||||||||||||||| ||||| ||||||||||||
Sbjct: 96 cggccgacgatgcaccatgtggtgcagatgctggag 61
>gb|BJ300624.1|BJ300624 BJ300624 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd3g06 5', mRNA sequence
Length = 669
Score = 40.1 bits (20), Expect = 0.33
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 572 gagaagaccgatgtctacagttttggggttct 603
||||||| ||||||||||| |||||||||||
Sbjct: 609 gagaagagtgatgtctacagctttggggttct 640
>gb|BJ314391.1|BJ314391 BJ314391 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf17i01 5', mRNA sequence
Length = 579
Score = 40.1 bits (20), Expect = 0.33
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 571 cgagaagaccgatgtctacagttt 594
|||||||| |||||||||||||||
Sbjct: 446 cgagaagagcgatgtctacagttt 469
>gb|BQ804428.1|BQ804428 WHE3554_E08_J16ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3554_E08_J16, mRNA sequence
Length = 792
Score = 40.1 bits (20), Expect = 0.33
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 404 cgtgatatcaagtcgagcaacatcttgcttga 435
|||||||||||| | ||||||||||| |||||
Sbjct: 747 cgtgatatcaaggctagcaacatcttacttga 778
>gb|BQ806139.1|BQ806139 WHE3575_C05_E09ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3575_C05_E09, mRNA sequence
Length = 587
Score = 40.1 bits (20), Expect = 0.33
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 571 cgagaagaccgatgtctacagttt 594
|||||||| |||||||||||||||
Sbjct: 491 cgagaagagcgatgtctacagttt 514
>gb|BJ245814.1|BJ245814 BJ245814 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf20e06 5', mRNA sequence
Length = 543
Score = 40.1 bits (20), Expect = 0.33
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 574 gaagaccgatgtctacagttttggggtt 601
||||| |||||||||||| |||||||||
Sbjct: 2 gaagagcgatgtctacagctttggggtt 29
>gb|BJ251706.1|BJ251706 BJ251706 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf20e06 3', mRNA sequence
Length = 555
Score = 40.1 bits (20), Expect = 0.33
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 574 gaagaccgatgtctacagttttggggtt 601
||||| |||||||||||| |||||||||
Sbjct: 523 gaagagcgatgtctacagctttggggtt 496
>gb|BJ271561.1|BJ271561 BJ271561 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh26i05 5', mRNA sequence
Length = 612
Score = 40.1 bits (20), Expect = 0.33
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 574 gaagaccgatgtctacagttttggggtt 601
||||| |||||||||||| |||||||||
Sbjct: 52 gaagagcgatgtctacagctttggggtt 79
>gb|BJ312481.1|BJ312481 BJ312481 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf10f14 5', mRNA sequence
Length = 663
Score = 40.1 bits (20), Expect = 0.33
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 574 gaagaccgatgtctacagttttggggtt 601
||||| |||||||||||| |||||||||
Sbjct: 142 gaagagcgatgtctacagctttggggtt 169
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 195,637
Number of Sequences: 636343
Number of extensions: 195637
Number of successful extensions: 56141
Number of sequences better than 0.5: 58
Number of HSP's better than 0.5 without gapping: 57
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 56039
Number of HSP's gapped (non-prelim): 102
length of query: 1164
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1144
effective length of database: 354,513,379
effective search space: 405563305576
effective search space used: 405563305576
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)