BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404820.2.1
(830 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ259588.1|BJ259588 BJ259588 Y. Ogihara unpublished cDNA... 178 4e-043
gb|BJ267676.1|BJ267676 BJ267676 Y. Ogihara unpublished cDNA... 170 1e-040
gb|CD902052.1|CD902052 G356.105M05F010918 G356 Triticum aes... 170 1e-040
gb|CD927659.1|CD927659 GR45.102M21F010315 GR45 Triticum aes... 170 1e-040
gb|CA617488.1|CA617488 wl1n.pk0020.b11 wl1n Triticum aestiv... 161 9e-038
gb|DR432259.1|DR432259 441E-AH2 Line 441 epidermal library ... 155 6e-036
gb|DQ086484.1| Triticum aestivum putative 1,3-beta-glucan s... 155 6e-036
gb|CA612893.1|CA612893 wr1.pk0160.a2 wr1 Triticum aestivum ... 149 4e-034
gb|BJ211685.1|BJ211685 BJ211685 Y. Ogihara unpublished cDNA... 143 2e-032
gb|CD927326.1|CD927326 GR45.101M21R010607 GR45 Triticum aes... 141 9e-032
gb|BE416009.1|BE416009 MUG003.D02R990623 ITEC MUG Wheat Spi... 133 2e-029
gb|BQ236623.1|BQ236623 TaE05029A09F TaE05 Triticum aestivum... 133 2e-029
gb|BJ265301.1|BJ265301 BJ265301 Y. Ogihara unpublished cDNA... 119 3e-025
gb|BJ272623.1|BJ272623 BJ272623 Y. Ogihara unpublished cDNA... 117 1e-024
gb|BQ170786.1|BQ170786 WHE2305_E08_I15ZT Wheat pre-anthesis... 117 1e-024
gb|CA613808.1|CA613808 wr1.pk0157.a9 wr1 Triticum aestivum ... 115 5e-024
gb|CD934561.1|CD934561 OV.001G12R001002 OV Triticum aestivu... 109 3e-022
gb|BJ208630.1|BJ208630 BJ208630 Y. Ogihara unpublished cDNA... 103 2e-020
gb|BQ239591.1|BQ239591 TaE05029A09R TaE05 Triticum aestivum... 98 1e-018
gb|CN010180.1|CN010180 WHE3867_F07_K13ZS Wheat Fusarium gra... 90 3e-016
gb|BQ905728.1|BQ905728 Ta04_17p23_R Ta04_AAFC_ECORC_Fusariu... 88 1e-015
gb|CA612946.1|CA612946 wr1.pk0149.f7 wr1 Triticum aestivum ... 84 2e-014
gb|CD934560.1|CD934560 OV.001G12F000920 OV Triticum aestivu... 82 7e-014
gb|CK153351.1|CK153351 FGAS031946 Triticum aestivum FGAS: T... 76 4e-012
gb|CV768769.1|CV768769 FGAS063160 Triticum aestivum FGAS: L... 76 4e-012
gb|BF199676.1|BF199676 WHE0591-0594_I13_I13ZE Triticum mono... 74 2e-011
gb|BG607810.1|BG607810 WHE2487_G04_M07ZS Triticum monococcu... 74 2e-011
gb|CD490322.1|CD490322 WHE2494_D06_H12ZT Triticum monococcu... 72 7e-011
gb|CK207448.1|CK207448 FGAS019071 Triticum aestivum FGAS: L... 70 3e-010
gb|BG607488.1|BG607488 WHE2494_D06_H12ZS Triticum monococcu... 66 4e-009
gb|CK154392.1|CK154392 FGAS033093 Triticum aestivum FGAS: T... 66 4e-009
gb|BJ273587.1|BJ273587 BJ273587 Y. Ogihara unpublished cDNA... 64 2e-008
gb|BJ273393.1|BJ273393 BJ273393 Y. Ogihara unpublished cDNA... 48 0.001
gb|CA650294.1|CA650294 wre1n.pk0150.g10 wre1n Triticum aest... 48 0.001
gb|CA667480.1|CA667480 wlsu1.pk015.b6 wlsu1 Triticum aestiv... 48 0.001
gb|CA669387.1|CA669387 wlsu1.pk022.h13 wlsu1 Triticum aesti... 48 0.001
gb|CA670118.1|CA670118 wlsu1.pk025.m7 wlsu1 Triticum aestiv... 48 0.001
gb|CD918312.1|CD918312 G608.108N24F010907 G608 Triticum aes... 48 0.001
gb|CK154616.1|CK154616 FGAS033318 Triticum aestivum FGAS: T... 48 0.001
gb|BE492039.1|BE492039 WHE0552_B02_B02ZE Triticum monococcu... 46 0.004
gb|CA604015.1|CA604015 wr1.pk0033.a10 wr1 Triticum aestivum... 46 0.004
gb|CA668899.1|CA668899 wlsu1.pk023.i2 wlsu1 Triticum aestiv... 44 0.015
gb|BE428096.1|BE428096 MTD003.C04F990615 ITEC MTD Durum Whe... 40 0.24
gb|BJ274419.1|BJ274419 BJ274419 Y. Ogihara unpublished cDNA... 40 0.24
gb|AL820316.1|AL820316 AL820316 N:130 Triticum aestivum cDN... 40 0.24
gb|CA499643.1|CA499643 WHE4009_G12_M23ZT Wheat meiotic anth... 40 0.24
gb|CA660459.1|CA660459 wlm1.pk0019.f4 wlm1 Triticum aestivu... 40 0.24
gb|CA667704.1|CA667704 wlsu1.pk017.p1 wlsu1 Triticum aestiv... 40 0.24
gb|CD454191.1|CD454191 WHE0991-0994_B23_B23ZT CS wheat pre-... 40 0.24
gb|CD938994.1|CD938994 OV.111N14F010309 OV Triticum aestivu... 40 0.24
gb|DR733707.1|DR733707 FGAS079465 Triticum aestivum FGAS: L... 40 0.24
gb|DQ086487.1| Triticum aestivum putative 1,3-beta-glucan s... 40 0.24
>gb|BJ259588.1|BJ259588 BJ259588 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh21h03 5', mRNA sequence
Length = 527
Score = 178 bits (90), Expect = 4e-043
Identities = 168/194 (86%)
Strand = Plus / Minus
Query: 360 atcagaagcaaaccccatccagttggcatgaacgcaaggatgcaaacaaagatgtcctga 419
||||||||||| |||||||||||||||||||| || |||||||| || |||||||| |
Sbjct: 293 atcagaagcaagccccatccagttggcatgaaggcgaggatgcagacgaagatgtcaagg 234
Query: 420 actgtcatgtgtgggattgctatcaagattatgataatagagataaacgttatgaatatc 479
||||||||||| | ||||||| | ||||||||||| || ||||| || ||||||||||||
Sbjct: 233 actgtcatgtgggcgattgctgttaagattatgatgatggagatgaatgttatgaatatc 174
Query: 480 agccccttgatcagccggaacacaagctggaactctgcactgaatttcctcctgccaact 539
|||||||||||||| ||||| || ||||||||||| || ||||| |||||||||| |||
Sbjct: 173 agccccttgatcagacggaagacgagctggaactccgcgctgaacctcctcctgccgact 114
Query: 540 gatacagtcttcat 553
|| || ||||||||
Sbjct: 113 gacacggtcttcat 100
Score = 109 bits (55), Expect = 3e-022
Identities = 157/191 (82%)
Strand = Plus / Minus
Query: 135 cggtctttcttgtgtccgcctaggatacgagaaatctgcagacctctactgaaggcctgg 194
||||| |||||||| ||||| |||||||| || |||||||| ||||| ||||| ||||||
Sbjct: 518 cggtccttcttgtggccgccgaggatacgggagatctgcaggcctctgctgaacgcctgg 459
Query: 195 ttgaacagcatccttggctggaactccgaaacaaacgggaaccaagcgaggaatgcgatc 254
||||| |||||||| | ||||||||| || || || |||||||| ||||| || |||||
Sbjct: 458 ttgaagagcatcctggtctggaactcggacacgaaggggaaccacgcgagaaacgcgatg 399
Query: 255 ggggtgaacaacagcaagcccatgatgatctcatagcctcgggcaagcgccttgaccgat 314
|| ||||||| ||| | ||||||| ||||| ||||| ||||| || ||||| || ||
Sbjct: 398 ggcgtgaacagcaggagccccatgagaatctcgtagccacgggcgagagccttcacagac 339
Query: 315 ccccatagccc 325
||||| |||||
Sbjct: 338 ccccacagccc 328
>gb|BJ267676.1|BJ267676 BJ267676 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh12m05 5', mRNA sequence
Length = 633
Score = 170 bits (86), Expect = 1e-040
Identities = 158/182 (86%)
Strand = Plus / Minus
Query: 360 atcagaagcaaaccccatccagttggcatgaacgcaaggatgcaaacaaagatgtcctga 419
||||||||||| |||||||||||||||||||| || |||||||| || |||||||| |
Sbjct: 188 atcagaagcaagccccatccagttggcatgaaggcgaggatgcagacgaagatgtcaagg 129
Query: 420 actgtcatgtgtgggattgctatcaagattatgataatagagataaacgttatgaatatc 479
||||||||||| | ||||||| | ||||||||||| || ||||| || ||||||||||||
Sbjct: 128 actgtcatgtgggcgattgctgttaagattatgatgatggagatgaatgttatgaatatc 69
Query: 480 agccccttgatcagccggaacacaagctggaactctgcactgaatttcctcctgccaact 539
|||||||||||||| ||||| || ||||||||||| || ||||| |||||||||| |||
Sbjct: 68 agccccttgatcagacggaagacgagctggaactccgcgctgaacctcctcctgccgact 9
Query: 540 ga 541
||
Sbjct: 8 ga 7
Score = 117 bits (59), Expect = 1e-024
Identities = 173/211 (81%)
Strand = Plus / Minus
Query: 115 actccttgttccgtgcagcccggtctttcttgtgtccgcctaggatacgagaaatctgca 174
||||||||||||| | || ||||| |||||||| ||||| |||||||| || |||||||
Sbjct: 433 actccttgttccgggtggctcggtccttcttgtggccgccgaggatacgggagatctgca 374
Query: 175 gacctctactgaaggcctggttgaacagcatccttggctggaactccgaaacaaacggga 234
| ||||| ||||| ||||||||||| |||||||| | ||||||||| || || || ||||
Sbjct: 373 ggcctctgctgaacgcctggttgaagagcatcctggtctggaactcggacacgaagggga 314
Query: 235 accaagcgaggaatgcgatcggggtgaacaacagcaagcccatgatgatctcatagcctc 294
|||| ||||| || ||||| || ||||||| ||| | ||||||| ||||| ||||| |
Sbjct: 313 accacgcgagaaacgcgatgggcgtgaacagcaggagccccatgagaatctcgtagccac 254
Query: 295 gggcaagcgccttgaccgatccccatagccc 325
|||| || ||||| || || ||||| |||||
Sbjct: 253 gggcgagagccttcacagacccccacagccc 223
>gb|CD902052.1|CD902052 G356.105M05F010918 G356 Triticum aestivum cDNA clone G356105M05,
mRNA sequence
Length = 525
Score = 170 bits (86), Expect = 1e-040
Identities = 167/194 (86%)
Strand = Plus / Minus
Query: 360 atcagaagcaaaccccatccagttggcatgaacgcaaggatgcaaacaaagatgtcctga 419
|||||||||| ||||||||||| |||||||| || |||||||| || |||||||| |
Sbjct: 274 atcagaagcaggccccatccagtcggcatgaaggcgaggatgcagacgaagatgtcaagg 215
Query: 420 actgtcatgtgtgggattgctatcaagattatgataatagagataaacgttatgaatatc 479
||||||||||| | ||||||| | ||||||||||| || ||||| || ||||||||||||
Sbjct: 214 actgtcatgtgggcgattgctgttaagattatgatgatggagatgaatgttatgaatatc 155
Query: 480 agccccttgatcagccggaacacaagctggaactctgcactgaatttcctcctgccaact 539
|||||||||||||||||||| || ||||||||||| || ||||| |||||||||| |||
Sbjct: 154 agccccttgatcagccggaagacgagctggaactccgcgctgaacctcctcctgccgact 95
Query: 540 gatacagtcttcat 553
|| || ||||||||
Sbjct: 94 gacacggtcttcat 81
Score = 141 bits (71), Expect = 9e-032
Identities = 176/211 (83%)
Strand = Plus / Minus
Query: 115 actccttgttccgtgcagcccggtctttcttgtgtccgcctaggatacgagaaatctgca 174
||||||||||||| | || ||||| |||||||| ||||| |||||||| || |||||||
Sbjct: 519 actccttgttccgggtggctcggtccttcttgtgcccgccgaggatacgggagatctgca 460
Query: 175 gacctctactgaaggcctggttgaacagcatccttggctggaactccgaaacaaacggga 234
| ||||| ||||| ||||||||||| |||||||| | ||||||||| || || |||||||
Sbjct: 459 ggcctctgctgaacgcctggttgaagagcatcctggtctggaactcggacacgaacggga 400
Query: 235 accaagcgaggaatgcgatcggggtgaacaacagcaagcccatgatgatctcatagcctc 294
|||| |||||||| ||||| || ||||||| ||| | ||||| | |||||| ||||| |
Sbjct: 399 accacgcgaggaacgcgatgggcgtgaacagcaggagccccatcaggatctcgtagcccc 340
Query: 295 gggcaagcgccttgaccgatccccatagccc 325
|||| || ||||| ||||| ||||| |||||
Sbjct: 339 gggcgagggccttcaccgacccccacagccc 309
>gb|CD927659.1|CD927659 GR45.102M21F010315 GR45 Triticum aestivum cDNA clone GR45102M21,
mRNA sequence
Length = 706
Score = 170 bits (86), Expect = 1e-040
Identities = 167/194 (86%)
Strand = Plus / Minus
Query: 360 atcagaagcaaaccccatccagttggcatgaacgcaaggatgcaaacaaagatgtcctga 419
|||||||||| ||||||||||| |||||||| || |||||||| || |||||||| |
Sbjct: 599 atcagaagcaggccccatccagtcggcatgaaggcgaggatgcagacgaagatgtcaagg 540
Query: 420 actgtcatgtgtgggattgctatcaagattatgataatagagataaacgttatgaatatc 479
||||||||||| | ||||||| | ||||||||||| || ||||| || ||||||||||||
Sbjct: 539 actgtcatgtgggcgattgctgttaagattatgatgatggagatgaatgttatgaatatc 480
Query: 480 agccccttgatcagccggaacacaagctggaactctgcactgaatttcctcctgccaact 539
|||||||||||||||||||| || ||||||||||| || ||||| |||||||||| |||
Sbjct: 479 agccccttgatcagccggaagacgagctggaactccgcgctgaacctcctcctgccgact 420
Query: 540 gatacagtcttcat 553
|| || ||||||||
Sbjct: 419 gacacggtcttcat 406
Score = 89.7 bits (45), Expect = 3e-016
Identities = 112/136 (82%)
Strand = Plus / Minus
Query: 627 ttcaaatgataaacaagaccatactggtaaataaagaagcgcaacgaaagcactatttca 686
||||||||||| ||||| || || ||||| || ||||| ||||| | ||| | |||||||
Sbjct: 329 ttcaaatgatacacaagcccgtattggtagatgaagaaacgcaatgcaagaagtatttca 270
Query: 687 agaacagtgccacgctttccagaatgcctaagannctcctgctctttttcccaccatgac 746
|||| ||||||||||| ||||| || | |||| | |||||||||| ||||||||||||
Sbjct: 269 agaatggtgccacgcttcccagagtgacgaagaggcccctgctctttgtcccaccatgac 210
Query: 747 tnncancttttctctg 762
| || ||||||||||
Sbjct: 209 tcccagcttttctctg 194
>gb|CA617488.1|CA617488 wl1n.pk0020.b11 wl1n Triticum aestivum cDNA clone wl1n.pk0020.b11
5' end, mRNA sequence
Length = 591
Score = 161 bits (81), Expect = 9e-038
Identities = 183/217 (84%)
Strand = Plus / Minus
Query: 360 atcagaagcaaaccccatccagttggcatgaacgcaaggatgcaaacaaagatgtcctga 419
||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||| |
Sbjct: 239 atcagcagcaaaccccatccagtgggcatgaaagcaaggatgcaaacaaatatgtccagc 180
Query: 420 actgtcatgtgtgggattgctatcaagattatgataatagagataaacgttatgaatatc 479
|| |||||| ||||| ||||| | ||||| | || | |||| ||||| ||||||
Sbjct: 179 accgtcatgccagggatcgctattaggattaccacgatggctgtaaatgttataaatatc 120
Query: 480 agccccttgatcagccggaacacaagctggaactctgcactgaatttcctcctgccaact 539
|| |||||||||| ||||||||| |||||||||||||||||||| | |||||||| |||
Sbjct: 119 agacccttgatcaaccggaacactagctggaactctgcactgaaccttctcctgcccact 60
Query: 540 gatacagtcttcatcacgagcaaaatgacaaagatta 576
||||| |||||||| ||||||||||| ||||| ||||
Sbjct: 59 gatacggtcttcataacgagcaaaatcacaaaaatta 23
Score = 58.0 bits (29), Expect = 1e-006
Identities = 113/137 (82%), Gaps = 3/137 (2%)
Strand = Plus / Minus
Query: 189 gcctggttgaacagcatccttggctggaactccgaaacaaacgggaaccaagcgaggaat 248
|||| ||||||||||||| ||| ||| || ||||| || ||||||||||| ||||||||
Sbjct: 407 gccttgttgaacagcatc-ttgtctg-aattccgacacgaacgggaaccaggcgaggaa- 351
Query: 249 gcgatcggggtgaacaacagcaagcccatgatgatctcatagcctcgggcaagcgccttg 308
||||| || ||||||| || | ||||| | |||||| ||||| |||||||| ||||||
Sbjct: 350 gcgatgggcgtgaacaggagaagtcccatcaggatctcgtagccccgggcaagagccttg 291
Query: 309 accgatccccatagccc 325
| ||| ||||| |||||
Sbjct: 290 atcgagccccagagccc 274
>gb|DR432259.1|DR432259 441E-AH2 Line 441 epidermal library Triticum monococcum cDNA, mRNA
sequence
Length = 649
Score = 155 bits (78), Expect = 6e-036
Identities = 265/328 (80%)
Strand = Plus / Minus
Query: 372 ccccatccagttggcatgaacgcaaggatgcaaacaaagatgtcctgaactgtcatgtgt 431
|||||||| || |||||||| || |||||||| ||||| |||||||| | ||||||||
Sbjct: 328 ccccatcccgtcggcatgaaggcgaggatgcagacaaatatgtcctggatcgtcatgtgg 269
Query: 432 gggattgctatcaagattatgataatagagataaacgttatgaatatcagccccttgatc 491
||||| | |||| ||| | ||| | ||||| || ||||| ||||||||||||| |
Sbjct: 268 gggatcacgatcaggatcacgatggtggagatgaagacgatgaagatcagccccttgagc 209
Query: 492 agccggaacacaagctggaactctgcactgaatttcctcctgccaactgatacagtcttc 551
||||||||||||||||||||||| || |||||||||| || ||||| || |||| ||||
Sbjct: 208 agccggaacacaagctggaactcggcgctgaatttccgccgaccaaccgacacagccttc 149
Query: 552 atcacgagcaaaatgacaaagattatgacccacgagatgcnntaaaccagaacgctcttc 611
||||| ||||| |||| ||||| | ||||| || | || || ||||| ||||||||
Sbjct: 148 atcaccagcaatatgaagaagatgacaacccatgacaagcaatacaccaggacgctcttg 89
Query: 612 gtgtgagtggtgatgttcaaatgataaacaagaccatactggtaaataaagaagcgcaac 671
||||| |||| ||||| | ||| |||||||| ||||||||||| || |||||||||| |
Sbjct: 88 gtgtgtttggttatgttgagatggtaaacaagcccatactggtagatgaagaagcgcacc 29
Query: 672 gaaagcactatttcaagaacagtgccac 699
| |||||||| |||||||| |||||||
Sbjct: 28 gccagcactatctcaagaacggtgccac 1
Score = 93.7 bits (47), Expect = 2e-017
Identities = 153/187 (81%), Gaps = 1/187 (0%)
Strand = Plus / Minus
Query: 141 ttcttgtgtccgcctaggatacgagaaatctgcagacctctactgaaggcctggttgaac 200
|||||||| ||||| ||||| | || |||||||| || | |||||||||||||||||
Sbjct: 558 ttcttgtgcccgcccaggatcctcgagatctgcagcccacggctgaaggcctggttgaag 499
Query: 201 agcatccttggctggaactccgaaacaaacgggaaccaagcgaggaatgcgatcggggtg 260
||||||| | ||||||||| || || ||||||||||| || ||||| ||||||||||||
Sbjct: 498 agcatccg-gtctggaactcagacacgaacgggaaccacgccaggaacgcgatcggggtg 440
Query: 261 aacaacagcaagcccatgatgatctcatagcctcgggcaagcgccttgaccgatccccat 320
|| | ||||| |||||||||||||| || || || || |||||| || ||| |||||
Sbjct: 439 aagagcagcagccccatgatgatctcgtacccacgagccagcgcccggatcgacccccac 380
Query: 321 agcccca 327
|||||||
Sbjct: 379 agcccca 373
>gb|DQ086484.1| Triticum aestivum putative 1,3-beta-glucan synthase 3 (GSL3) mRNA,
partial cds
Length = 481
Score = 155 bits (78), Expect = 6e-036
Identities = 156/182 (85%)
Strand = Plus / Minus
Query: 360 atcagaagcaaaccccatccagttggcatgaacgcaaggatgcaaacaaagatgtcctga 419
|||||||||| ||||||||||| |||||||| || |||||||| || |||||||| |
Sbjct: 247 atcagaagcaggccccatccagtcggcatgaaggcgaggatgcagacgaagatgtcaagg 188
Query: 420 actgtcatgtgtgggattgctatcaagattatgataatagagataaacgttatgaatatc 479
||||||||||| | ||||||| | ||||||||||| || ||||| || ||||||||||||
Sbjct: 187 actgtcatgtgggcgattgctgttaagattatgatgatggagatgaatgttatgaatatc 128
Query: 480 agccccttgatcagccggaacacaagctggaactctgcactgaatttcctcctgccaact 539
|||||||||||||| ||||| || ||||||||||| || ||||| |||||||||| |||
Sbjct: 127 agccccttgatcagacggaagacgagctggaactccgcgctgaacctcctcctgccgact 68
Query: 540 ga 541
||
Sbjct: 67 ga 66
Score = 125 bits (63), Expect = 5e-027
Identities = 159/191 (83%)
Strand = Plus / Minus
Query: 135 cggtctttcttgtgtccgcctaggatacgagaaatctgcagacctctactgaaggcctgg 194
||||| |||||||| ||||| |||||||| || |||||||| ||||| ||||| ||||||
Sbjct: 472 cggtccttcttgtggccgccgaggatacgggagatctgcaggcctctgctgaacgcctgg 413
Query: 195 ttgaacagcatccttggctggaactccgaaacaaacgggaaccaagcgaggaatgcgatc 254
||||| |||||||| | ||||||||| || ||||| |||||||| || ||||| |||||
Sbjct: 412 ttgaaaagcatcctggtctggaactcggacacaaaggggaaccacgcaaggaacgcgatg 353
Query: 255 ggggtgaacaacagcaagcccatgatgatctcatagcctcgggcaagcgccttgaccgat 314
|| ||||||| ||| | ||||| | |||||| ||||| ||||| || ||||| |||||
Sbjct: 352 ggcgtgaacagcaggagccccatcaggatctcgtagccccgggcgagagccttcaccgac 293
Query: 315 ccccatagccc 325
||||| |||||
Sbjct: 292 ccccacagccc 282
>gb|CA612893.1|CA612893 wr1.pk0160.a2 wr1 Triticum aestivum cDNA clone wr1.pk0160.a2 5'
end, mRNA sequence
Length = 691
Score = 149 bits (75), Expect = 4e-034
Identities = 166/195 (85%), Gaps = 1/195 (0%)
Strand = Plus / Minus
Query: 360 atcagaagcaaaccccatcc-agttggcatgaacgcaaggatgcaaacaaagatgtcctg 418
|||||||||| |||||||| ||| |||||||| || |||||||| || |||||||| |
Sbjct: 321 atcagaagcaggccccatcccagtcggcatgaaggcgaggatgcagacgaagatgtcaag 262
Query: 419 aactgtcatgtgtgggattgctatcaagattatgataatagagataaacgttatgaatat 478
||||||||||| | ||||||| | ||||||||||| || ||||| || |||||||||||
Sbjct: 261 gactgtcatgtgggcgattgctgttaagattatgatgatggagatgaatgttatgaatat 202
Query: 479 cagccccttgatcagccggaacacaagctggaactctgcactgaatttcctcctgccaac 538
||||||||||||||| ||||| || ||||||||||| || ||||| |||||||||| ||
Sbjct: 201 cagccccttgatcagacggaagacgagctggaactccgcgctgaacctcctcctgccgac 142
Query: 539 tgatacagtcttcat 553
||| || ||||||||
Sbjct: 141 tgacacggtcttcat 127
>gb|BJ211685.1|BJ211685 BJ211685 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh32i15 5', mRNA sequence
Length = 342
Score = 143 bits (72), Expect = 2e-032
Identities = 165/195 (84%), Gaps = 1/195 (0%)
Strand = Plus / Minus
Query: 360 atcagaagcaaa-ccccatccagttggcatgaacgcaaggatgcaaacaaagatgtcctg 418
||||||||||| ||||||||||| |||||||| || |||||||| | |||||||| |
Sbjct: 324 atcagaagcaaggccccatccagtcggcatgaaggcgaggatgcagncgaagatgtcaag 265
Query: 419 aactgtcatgtgtgggattgctatcaagattatgataatagagataaacgttatgaatat 478
|||||||||| | ||||||| | ||||||||||| || ||||| || |||||||||||
Sbjct: 264 ggctgtcatgtgggcgattgctgttaagattatgatgatggagatgaatgttatgaatat 205
Query: 479 cagccccttgatcagccggaacacaagctggaactctgcactgaatttcctcctgccaac 538
||||||||||||||| ||||| || ||||||||||| || ||||| |||||||||| ||
Sbjct: 204 cagccccttgatcagacggaagacgagctggaactccgcgctgaacctcctcctgccgac 145
Query: 539 tgatacagtcttcat 553
||| || ||||||||
Sbjct: 144 tgacacggtcttcat 130
>gb|CD927326.1|CD927326 GR45.101M21R010607 GR45 Triticum aestivum cDNA clone GR45101M21,
mRNA sequence
Length = 567
Score = 141 bits (71), Expect = 9e-032
Identities = 176/211 (83%)
Strand = Plus / Plus
Query: 115 actccttgttccgtgcagcccggtctttcttgtgtccgcctaggatacgagaaatctgca 174
||||||||||||| | || ||||| |||||||| ||||| |||||||| || |||||||
Sbjct: 322 actccttgttccgggtggctcggtccttcttgtgcccgccgaggatacgggagatctgca 381
Query: 175 gacctctactgaaggcctggttgaacagcatccttggctggaactccgaaacaaacggga 234
| ||||| ||||| ||||||||||| |||||||| | ||||||||| || || |||||||
Sbjct: 382 ggcctctgctgaacgcctggttgaagagcatcctggtctggaactcggacacgaacggga 441
Query: 235 accaagcgaggaatgcgatcggggtgaacaacagcaagcccatgatgatctcatagcctc 294
|||| |||||||| ||||| || ||||||| ||| | ||||| | |||||| ||||| |
Sbjct: 442 accacgcgaggaacgcgatgggcgtgaacagcaggagccccatcaggatctcgtagcccc 501
Query: 295 gggcaagcgccttgaccgatccccatagccc 325
|||| || ||||| ||||| ||||| |||||
Sbjct: 502 gggcgagggccttcaccgaaccccacagccc 532
>gb|BE416009.1|BE416009 MUG003.D02R990623 ITEC MUG Wheat Spikelet Library Triticum aestivum
cDNA clone MUG003.D02, mRNA sequence
Length = 600
Score = 133 bits (67), Expect = 2e-029
Identities = 175/211 (82%)
Strand = Plus / Minus
Query: 115 actccttgttccgtgcagcccggtctttcttgtgtccgcctaggatacgagaaatctgca 174
||||||||||||| | || ||||| |||||||| ||||| |||||||| || |||||||
Sbjct: 326 actccttgttccgggtggctcggtccttcttgtggccgccgaggatacgggagatctgca 267
Query: 175 gacctctactgaaggcctggttgaacagcatccttggctggaactccgaaacaaacggga 234
| ||||| ||||| ||||||||||| |||||||| | ||||||||| || ||||| ||||
Sbjct: 266 ggcctctgctgaacgcctggttgaaaagcatcctggtctggaactcggacacaaagggga 207
Query: 235 accaagcgaggaatgcgatcggggtgaacaacagcaagcccatgatgatctcatagcctc 294
|||| || ||||| ||||| || ||||||| ||| | ||||| | |||||| ||||| |
Sbjct: 206 accacgcaaggaacgcgatgggcgtgaacagcaggagccccatcaggatctcgtagcccc 147
Query: 295 gggcaagcgccttgaccgatccccatagccc 325
|||| || ||||| ||||| ||||| |||||
Sbjct: 146 gggcgagagccttcaccgacccccacagccc 116
Score = 65.9 bits (33), Expect = 4e-009
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 360 atcagaagcaaaccccatccagttggcatgaacgcaaggatgcaaacaaagatgtcctga 419
|||||||||| ||||||||||| |||||||| || |||||||| || |||||||| |
Sbjct: 81 atcagaagcaggccccatccagtcggcatgaaggcgaggatgcagacgaagatgtcaagg 22
Query: 420 actgtcatgtgtgggattgct 440
||||||||||| | |||||||
Sbjct: 21 actgtcatgtgggcgattgct 1
>gb|BQ236623.1|BQ236623 TaE05029A09F TaE05 Triticum aestivum cDNA clone TaE05029A09F, mRNA
sequence
Length = 587
Score = 133 bits (67), Expect = 2e-029
Identities = 175/211 (82%)
Strand = Plus / Plus
Query: 115 actccttgttccgtgcagcccggtctttcttgtgtccgcctaggatacgagaaatctgca 174
||||||||||||| | || ||||| |||||||| ||||| |||||||| || |||||||
Sbjct: 372 actccttgttccgggtggctcggtccttcttgtggccgccgaggatacgggagatctgca 431
Query: 175 gacctctactgaaggcctggttgaacagcatccttggctggaactccgaaacaaacggga 234
| ||||| ||||| ||||||||||| |||||||| | ||||||||| || ||||| ||||
Sbjct: 432 ggcctctgctgaacgcctggttgaaaagcatcctggtctggaactcggacacaaagggga 491
Query: 235 accaagcgaggaatgcgatcggggtgaacaacagcaagcccatgatgatctcatagcctc 294
|||| || ||||| ||||| || ||||||| ||| | ||||| | |||||| ||||| |
Sbjct: 492 accacgcaaggaacgcgatgggcgtgaacagcaggagccccatcaggatctcgtagcccc 551
Query: 295 gggcaagcgccttgaccgatccccatagccc 325
|||| || ||||| ||||| ||||| |||||
Sbjct: 552 gggcgagagccttcaccgacccccacagccc 582
>gb|BJ265301.1|BJ265301 BJ265301 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh21h03 3', mRNA sequence
Length = 686
Score = 119 bits (60), Expect = 3e-025
Identities = 108/124 (87%)
Strand = Plus / Plus
Query: 360 atcagaagcaaaccccatccagttggcatgaacgcaaggatgcaaacaaagatgtcctga 419
||||||||||| |||||||||||||||||||| || |||||||| || |||||||| |
Sbjct: 563 atcagaagcaagccccatccagttggcatgaaggcgaggatgcagacgaagatgtcaagg 622
Query: 420 actgtcatgtgtgggattgctatcaagattatgataatagagataaacgttatgaatatc 479
||||||||||| | ||||||| | ||||||||||| || ||||| || ||||||||||||
Sbjct: 623 actgtcatgtgggcgattgctgttaagattatgatgatggagatgaatgttatgaatatc 682
Query: 480 agcc 483
||||
Sbjct: 683 agcc 686
Score = 117 bits (59), Expect = 1e-024
Identities = 173/211 (81%)
Strand = Plus / Plus
Query: 115 actccttgttccgtgcagcccggtctttcttgtgtccgcctaggatacgagaaatctgca 174
||||||||||||| | || ||||| |||||||| ||||| |||||||| || |||||||
Sbjct: 318 actccttgttccgggtggctcggtccttcttgtggccgccgaggatacgggagatctgca 377
Query: 175 gacctctactgaaggcctggttgaacagcatccttggctggaactccgaaacaaacggga 234
| ||||| ||||| ||||||||||| |||||||| | ||||||||| || || || ||||
Sbjct: 378 ggcctctgctgaacgcctggttgaagagcatcctggtctggaactcggacacgaagggga 437
Query: 235 accaagcgaggaatgcgatcggggtgaacaacagcaagcccatgatgatctcatagcctc 294
|||| ||||| || ||||| || ||||||| ||| | ||||||| ||||| ||||| |
Sbjct: 438 accacgcgagaaacgcgatgggcgtgaacagcaggagccccatgagaatctcgtagccac 497
Query: 295 gggcaagcgccttgaccgatccccatagccc 325
|||| || ||||| || || ||||| |||||
Sbjct: 498 gggcgagagccttcacagacccccacagccc 528
>gb|BJ272623.1|BJ272623 BJ272623 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh12m05 3', mRNA sequence
Length = 678
Score = 117 bits (59), Expect = 1e-024
Identities = 173/211 (81%)
Strand = Plus / Plus
Query: 115 actccttgttccgtgcagcccggtctttcttgtgtccgcctaggatacgagaaatctgca 174
||||||||||||| | || ||||| |||||||| ||||| |||||||| || |||||||
Sbjct: 326 actccttgttccgggtggctcggtccttcttgtggccgccgaggatacgggagatctgca 385
Query: 175 gacctctactgaaggcctggttgaacagcatccttggctggaactccgaaacaaacggga 234
| ||||| ||||| ||||||||||| |||||||| | ||||||||| || || || ||||
Sbjct: 386 ggcctctgctgaacgcctggttgaagagcatcctggtctggaactcggacacgaagggga 445
Query: 235 accaagcgaggaatgcgatcggggtgaacaacagcaagcccatgatgatctcatagcctc 294
|||| ||||| || ||||| || ||||||| ||| | ||||||| ||||| ||||| |
Sbjct: 446 accacgcgagaaacgcgatgggcgtgaacagcaggagccccatgagaatctcgtagccac 505
Query: 295 gggcaagcgccttgaccgatccccatagccc 325
|||| || ||||| || || ||||| |||||
Sbjct: 506 gggcgagagccttcacagacccccacagccc 536
Score = 95.6 bits (48), Expect = 5e-018
Identities = 90/104 (86%)
Strand = Plus / Plus
Query: 360 atcagaagcaaaccccatccagttggcatgaacgcaaggatgcaaacaaagatgtcctga 419
||||||||||| |||||||||||||||||||| || |||||||| || |||||||| |
Sbjct: 571 atcagaagcaagccccatccagttggcatgaaggcgaggatgcagacgaagatgtcaagg 630
Query: 420 actgtcatgtgtgggattgctatcaagattatgataatagagat 463
||||||||||| | ||||||| | ||||||||||| || |||||
Sbjct: 631 actgtcatgtgggcgattgctgttaagattatgatgatggagat 674
>gb|BQ170786.1|BQ170786 WHE2305_E08_I15ZT Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2305_E08_I15, mRNA sequence
Length = 534
Score = 117 bits (59), Expect = 1e-024
Identities = 119/139 (85%)
Strand = Plus / Plus
Query: 115 actccttgttccgtgcagcccggtctttcttgtgtccgcctaggatacgagaaatctgca 174
||||||||||||| | || ||||| |||||||| ||||| |||||||| || |||||||
Sbjct: 390 actccttgttccgggtggctcggtccttcttgtgcccgccgaggatacgggagatctgca 449
Query: 175 gacctctactgaaggcctggttgaacagcatccttggctggaactccgaaacaaacggga 234
| ||||| ||||| ||||||||||| |||||||| | ||||||||| || || |||||||
Sbjct: 450 ggcctctgctgaacgcctggttgaagagcatcctggtctggaactcggacacgaacggga 509
Query: 235 accaagcgaggaatgcgat 253
|||| |||||||| |||||
Sbjct: 510 accacgcgaggaacgcgat 528
>gb|CA613808.1|CA613808 wr1.pk0157.a9 wr1 Triticum aestivum cDNA clone wr1.pk0157.a9 5'
end, mRNA sequence
Length = 404
Score = 115 bits (58), Expect = 5e-024
Identities = 127/150 (84%)
Strand = Plus / Minus
Query: 115 actccttgttccgtgcagcccggtctttcttgtgtccgcctaggatacgagaaatctgca 174
||||||||||||| | || ||||| |||||||| ||||| |||||||| || |||||||
Sbjct: 162 actccttgttccgggtggctcggtccttcttgtggccgccgaggatacgggagatctgca 103
Query: 175 gacctctactgaaggcctggttgaacagcatccttggctggaactccgaaacaaacggga 234
| ||||| ||||| ||||||||||| |||||||| | ||||||||| || ||||| ||||
Sbjct: 102 ggcctctgctgaacgcctggttgaaaagcatcctggtctggaactcggacacaaagggga 43
Query: 235 accaagcgaggaatgcgatcggggtgaaca 264
|||| || ||||| ||||| || |||||||
Sbjct: 42 accacgcaaggaacgcgatgggcgtgaaca 13
>gb|CD934561.1|CD934561 OV.001G12R001002 OV Triticum aestivum cDNA clone OV001G12, mRNA
sequence
Length = 730
Score = 109 bits (55), Expect = 3e-022
Identities = 172/211 (81%)
Strand = Plus / Plus
Query: 115 actccttgttccgtgcagcccggtctttcttgtgtccgcctaggatacgagaaatctgca 174
||||||||||||| | || ||||| |||||||| ||||| |||||||| || |||||||
Sbjct: 383 actccttgttccgggtggctcggtccttcttgtggccgccgaggatacgggagatctgca 442
Query: 175 gacctctactgaaggcctggttgaacagcatccttggctggaactccgaaacaaacggga 234
| ||| | ||||| ||||||||||| |||||||| | ||||||||| || || || ||||
Sbjct: 443 ggcctttgctgaacgcctggttgaagagcatcctggtctggaactcggacacgaagggga 502
Query: 235 accaagcgaggaatgcgatcggggtgaacaacagcaagcccatgatgatctcatagcctc 294
|||| ||||| || ||||| || ||||||| ||| | ||||||| ||||| ||||| |
Sbjct: 503 accacgcgagaaacgcgatgggcgtgaacagcaggagccccatgagaatctcgtagccac 562
Query: 295 gggcaagcgccttgaccgatccccatagccc 325
|||| || ||||| || || ||||| |||||
Sbjct: 563 gggcgagagccttcacagacccccacagccc 593
Score = 93.7 bits (47), Expect = 2e-017
Identities = 83/95 (87%)
Strand = Plus / Plus
Query: 360 atcagaagcaaaccccatccagttggcatgaacgcaaggatgcaaacaaagatgtcctga 419
||||||||||| |||||||||||||||||||| || |||||||| || |||||||| |
Sbjct: 628 atcagaagcaagccccatccagttggcatgaaggcgaggatgcagacgaagatgtcaagg 687
Query: 420 actgtcatgtgtgggattgctatcaagattatgat 454
||||||||||| | ||||||| | |||||||||||
Sbjct: 688 actgtcatgtgggcgattgctgttaagattatgat 722
>gb|BJ208630.1|BJ208630 BJ208630 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh10a17 5', mRNA sequence
Length = 451
Score = 103 bits (52), Expect = 2e-020
Identities = 91/104 (87%)
Strand = Plus / Minus
Query: 183 ctgaaggcctggttgaacagcatccttggctggaactccgaaacaaacgggaaccaagcg 242
||||||||||||||||| ||||||| | |||||||||||| || ||||||||||| ||
Sbjct: 436 ctgaaggcctggttgaagagcatccgggtctggaactccgacacgaacgggaaccacgcc 377
Query: 243 aggaatgcgatcggggtgaacaacagcaagcccatgatgatctc 286
||||| |||||||||||||| | ||||| ||||||||||||||
Sbjct: 376 aggaacgcgatcggggtgaagagcagcagccccatgatgatctc 333
Score = 87.7 bits (44), Expect = 1e-015
Identities = 158/196 (80%)
Strand = Plus / Minus
Query: 372 ccccatccagttggcatgaacgcaaggatgcaaacaaagatgtcctgaactgtcatgtgt 431
|||||||| || ||||||||||| |||||||| || || |||||||| | ||||||||
Sbjct: 247 ccccatcctgtcggcatgaacgcgaggatgcagacgaatatgtcctggatcgtcatgtgg 188
Query: 432 gggattgctatcaagattatgataatagagataaacgttatgaatatcagccccttgatc 491
||||| | |||| ||| | ||| | ||||| || ||||| || |||||||||| |
Sbjct: 187 gggatcacgatcaggatcacgatggtggagatgaagacgatgaagatgagccccttgagc 128
Query: 492 agccggaacacaagctggaactctgcactgaatttcctcctgccaactgatacagtcttc 551
||||||||||||||||||||||| || |||||||||| | || || || |||| ||||
Sbjct: 127 agccggaacacaagctggaactccgcgctgaatttccgtcgaccgaccgacacagccttc 68
Query: 552 atcacgagcaaaatga 567
||||| ||||||||||
Sbjct: 67 atcaccagcaaaatga 52
>gb|BQ239591.1|BQ239591 TaE05029A09R TaE05 Triticum aestivum cDNA clone TaE05029A09R, mRNA
sequence
Length = 603
Score = 97.6 bits (49), Expect = 1e-018
Identities = 113/136 (83%)
Strand = Plus / Minus
Query: 627 ttcaaatgataaacaagaccatactggtaaataaagaagcgcaacgaaagcactatttca 686
||||||||||| ||||| || || ||||| || ||||| ||||| | ||| | |||||||
Sbjct: 473 ttcaaatgatacacaagcccgtattggtagatgaagaaacgcaatgcaagaagtatttca 414
Query: 687 agaacagtgccacgctttccagaatgcctaagannctcctgctctttttcccaccatgac 746
|||| ||||||||||| |||||||||| |||| | |||||||||| |||||||||||
Sbjct: 413 agaatggtgccacgcttcccagaatgccgaagaggcccctgctctttgtcccaccatgat 354
Query: 747 tnncancttttctctg 762
| || ||||||||||
Sbjct: 353 tcccagcttttctctg 338
Score = 44.1 bits (22), Expect = 0.015
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 504 agctggaactctgcactgaatttcctcctgccaactgatacagtcttcat 553
||||||||||| || ||||| |||||||||| ||||| || ||||||||
Sbjct: 599 agctggaactccgcgctgaacctcctcctgccgactgacacggtcttcat 550
>gb|CN010180.1|CN010180 WHE3867_F07_K13ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3867_F07_K13,
mRNA sequence
Length = 684
Score = 89.7 bits (45), Expect = 3e-016
Identities = 112/136 (82%)
Strand = Plus / Minus
Query: 627 ttcaaatgataaacaagaccatactggtaaataaagaagcgcaacgaaagcactatttca 686
||||||||||| ||||| || || ||||| || ||||| ||||| | ||| | |||||||
Sbjct: 605 ttcaaatgatacacaagcccgtattggtagatgaagaaacgcaatgcaagaagtatttca 546
Query: 687 agaacagtgccacgctttccagaatgcctaagannctcctgctctttttcccaccatgac 746
|||| ||||||||||| ||||| || | |||| | |||||||||| ||||||||||||
Sbjct: 545 agaatggtgccacgcttcccagagtgacgaagaggcccctgctctttgtcccaccatgac 486
Query: 747 tnncancttttctctg 762
| || ||||||||||
Sbjct: 485 tcccagcttttctctg 470
>gb|BQ905728.1|BQ905728 Ta04_17p23_R
Ta04_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta04_17p23, mRNA
sequence
Length = 351
Score = 87.7 bits (44), Expect = 1e-015
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 115 actccttgttccgtgcagcccggtctttcttgtgtccgcctaggatacgagaaatctgca 174
||||||||||||| | || ||||| |||||||| ||||| |||||||| || |||||||
Sbjct: 227 actccttgttccgggtggctcggtccttcttgtggccgccgaggatacgggakatctgca 286
Query: 175 gacctctactgaaggcctggttgaacagcatccttggctggaactccgaaacaaacggga 234
| ||||| ||||| |||||||||| |||||||| | |||| |||| || ||||| ||||
Sbjct: 287 ggcctctkctgaacgcctggttgayaagcatcctggtctggwactcggacacaaagggga 346
Query: 235 ac 236
||
Sbjct: 347 ac 348
>gb|CA612946.1|CA612946 wr1.pk0149.f7 wr1 Triticum aestivum cDNA clone wr1.pk0149.f7 5'
end, mRNA sequence
Length = 495
Score = 83.8 bits (42), Expect = 2e-014
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 165 gaaatctgcagacctctactgaaggcctggttgaacagcatccttggctggaactccgaa 224
||||||||||||||||||||||| ||||||||||||||||||| | ||||||||| ||
Sbjct: 134 gaaatctgcagacctctactgaacgcctggttgaacagcatccgcgtctggaactcggag 75
Query: 225 acaaacgggaacca 238
|| || ||||||||
Sbjct: 74 acgaaggggaacca 61
>gb|CD934560.1|CD934560 OV.001G12F000920 OV Triticum aestivum cDNA clone OV001G12, mRNA
sequence
Length = 571
Score = 81.8 bits (41), Expect = 7e-014
Identities = 111/136 (81%)
Strand = Plus / Minus
Query: 627 ttcaaatgataaacaagaccatactggtaaataaagaagcgcaacgaaagcactatttca 686
||||||||||| ||||| || || ||||| || ||||| ||||| | ||| | |||||||
Sbjct: 437 ttcaaatgatacacaagcccgtattggtagatgaagaaacgcaatgcaagaagtatttca 378
Query: 687 agaacagtgccacgctttccagaatgcctaagannctcctgctctttttcccaccatgac 746
|||| ||||||||||| ||||| || | |||| | |||||||||| |||||||||||
Sbjct: 377 agaatggtgccacgcttcccagagtgacgaagaggcccctgctctttgtcccaccatgat 318
Query: 747 tnncancttttctctg 762
| || ||||||||||
Sbjct: 317 tcccagcttttctctg 302
>gb|CK153351.1|CK153351 FGAS031946 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 869
Score = 75.8 bits (38), Expect = 4e-012
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 165 gaaatctgcagacctctactgaaggcctggttgaacagcatccttggctggaactccgaa 224
||||||||||| ||||||||||| ||||||||||||||||||| | ||||||||| ||
Sbjct: 453 gaaatctgcagtcctctactgaatgcctggttgaacagcatccgcgtctggaactcggag 394
Query: 225 acaaacgggaacca 238
|| || ||||||||
Sbjct: 393 acgaaggggaacca 380
>gb|CV768769.1|CV768769 FGAS063160 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 852
Score = 75.8 bits (38), Expect = 4e-012
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 165 gaaatctgcagacctctactgaaggcctggttgaacagcatccttggctggaactccgaa 224
||||||||||| ||||||||||| ||||||||||||||||||| | ||||||||| ||
Sbjct: 404 gaaatctgcagtcctctactgaatgcctggttgaacagcatccgcgtctggaactcggag 345
Query: 225 acaaacgggaacca 238
|| || ||||||||
Sbjct: 344 acgaaggggaacca 331
>gb|BF199676.1|BF199676 WHE0591-0594_I13_I13ZE Triticum monococcum vegetative apex cDNA
library Triticum monococcum cDNA clone
WHE0591-0594_I13_I13, mRNA sequence
Length = 380
Score = 73.8 bits (37), Expect = 2e-011
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 115 actccttgttccgtgcagcccggtctttcttgtgtccgcctaggatacgagaaatctgca 174
||||||||||||| | || ||||| |||||||| ||||| |||||||| || |||||||
Sbjct: 88 actccttgttccgggtggctcggtccttcttgtggccgccgaggatacgggagatctgca 29
Query: 175 gacctctactgaaggcctggttgaa 199
| ||||| ||||| |||||||||||
Sbjct: 28 ggcctctgctgaacgcctggttgaa 4
>gb|BG607810.1|BG607810 WHE2487_G04_M07ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2487_G04_M07,
mRNA sequence
Length = 480
Score = 73.8 bits (37), Expect = 2e-011
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 115 actccttgttccgtgcagcccggtctttcttgtgtccgcctaggatacgagaaatctgca 174
||||||||||||| | || ||||| |||||||| ||||| |||||||| || |||||||
Sbjct: 88 actccttgttccgggtggctcggtccttcttgtggccgccgaggatacgggagatctgca 29
Query: 175 gacctctactgaaggcctggttgaa 199
| ||||| ||||| |||||||||||
Sbjct: 28 ggcctctgctgaacgcctggttgaa 4
>gb|CD490322.1|CD490322 WHE2494_D06_H12ZT Triticum monococcum DV92 early reproductive apex
cDNA library Triticum monococcum cDNA clone
WHE2494_D06_H12, mRNA sequence
Length = 421
Score = 71.9 bits (36), Expect = 7e-011
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 165 gaaatctgcagacctctactgaaggcctggttgaacagcatccttggctggaactc 220
||||||||||| ||||||||||| ||||||||||||||||||| | |||||||||
Sbjct: 362 gaaatctgcagtcctctactgaacgcctggttgaacagcatccgcgtctggaactc 417
>gb|CK207448.1|CK207448 FGAS019071 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1129
Score = 69.9 bits (35), Expect = 3e-010
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 165 gaaatctgcagacctctactgaaggcctggttgaacagcatcc 207
||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 803 gaaatctgcagtcctctactgaatgcctggttgaacagcatcc 761
>gb|BG607488.1|BG607488 WHE2494_D06_H12ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2494_D06_H12,
mRNA sequence
Length = 379
Score = 65.9 bits (33), Expect = 4e-009
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 138 tctttcttgtgtccgcctaggatacgagaaatctgcagacctctactgaaggcctggttg 197
|||||||| || ||||| || || || ||||||||||| ||||||||||| |||||||||
Sbjct: 65 tctttcttctgaccgccaagaatccgggaaatctgcagtcctctactgaacgcctggttg 6
Query: 198 aacag 202
|||||
Sbjct: 5 aacag 1
>gb|CK154392.1|CK154392 FGAS033093 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 931
Score = 65.9 bits (33), Expect = 4e-009
Identities = 89/109 (81%)
Strand = Plus / Plus
Query: 156 aggatacgagaaatctgcagacctctactgaaggcctggttgaacagcatccttggctgg 215
||||||| || ||||||| ||||| ||||| |||||||||| |||||||| | ||||
Sbjct: 625 aggatacnggagatctgcangcctctgctgaacgcctggttgangagcatcctggtctgg 684
Query: 216 aactccgaaacaaacgggaaccaagcgaggaatgcgatcggggtgaaca 264
||||| || || || |||||||| ||||| || ||||| || |||||||
Sbjct: 685 aactcggacacgaangggaaccacgcgagaaacgcgatgggcgtgaaca 733
>gb|BJ273587.1|BJ273587 BJ273587 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh17p13 3', mRNA sequence
Length = 509
Score = 63.9 bits (32), Expect = 2e-008
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 165 gaaatctgcagacctctactgaaggcctggttgaac 200
||||||||||||||||||||||| ||||||||||||
Sbjct: 473 gaaatctgcagacctctactgaacgcctggttgaac 508
>gb|BJ273393.1|BJ273393 BJ273393 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh17b01 3', mRNA sequence
Length = 468
Score = 48.1 bits (24), Expect = 0.001
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 163 gagaaatctgcagacctctactgaaggcctggttgaacag 202
||||||||| || |||||| ||||| ||||||||||||||
Sbjct: 138 gagaaatctccaaacctctgctgaaagcctggttgaacag 177
>gb|CA650294.1|CA650294 wre1n.pk0150.g10 wre1n Triticum aestivum cDNA clone
wre1n.pk0150.g10 5' end, mRNA sequence
Length = 435
Score = 48.1 bits (24), Expect = 0.001
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 163 gagaaatctgcagacctctactgaaggcctggttgaacag 202
||||||||| || |||||| ||||| ||||||||||||||
Sbjct: 293 gagaaatctccaaacctctgctgaaagcctggttgaacag 254
>gb|CA667480.1|CA667480 wlsu1.pk015.b6 wlsu1 Triticum aestivum cDNA clone wlsu1.pk015.b6 5'
end, mRNA sequence
Length = 455
Score = 48.1 bits (24), Expect = 0.001
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 163 gagaaatctgcagacctctactgaaggcctggttgaacag 202
||||||||| || |||||| ||||| ||||||||||||||
Sbjct: 182 gagaaatctccaaacctctgctgaaagcctggttgaacag 143
>gb|CA669387.1|CA669387 wlsu1.pk022.h13 wlsu1 Triticum aestivum cDNA clone wlsu1.pk022.h13
5' end, mRNA sequence
Length = 437
Score = 48.1 bits (24), Expect = 0.001
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 163 gagaaatctgcagacctctactgaaggcctggttgaacag 202
||||||||| || |||||| ||||| ||||||||||||||
Sbjct: 351 gagaaatctccaaacctctgctgaaagcctggttgaacag 390
>gb|CA670118.1|CA670118 wlsu1.pk025.m7 wlsu1 Triticum aestivum cDNA clone wlsu1.pk025.m7 5'
end, mRNA sequence
Length = 460
Score = 48.1 bits (24), Expect = 0.001
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 163 gagaaatctgcagacctctactgaaggcctggttgaacag 202
||||||||| || |||||| ||||| ||||||||||||||
Sbjct: 166 gagaaatctccaaacctctgctgaaagcctggttgaacag 127
>gb|CD918312.1|CD918312 G608.108N24F010907 G608 Triticum aestivum cDNA clone G608108N24,
mRNA sequence
Length = 586
Score = 48.1 bits (24), Expect = 0.001
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 163 gagaaatctgcagacctctactgaaggcctggttgaacag 202
||||||||| || |||||| ||||| ||||||||||||||
Sbjct: 277 gagaaatctccaaacctctgctgaaagcctggttgaacag 238
>gb|CK154616.1|CK154616 FGAS033318 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 847
Score = 48.1 bits (24), Expect = 0.001
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 158 gatacgagaaatctgcagacctctactgaaggcctggttgaacagcatcct 208
|||||| || |||||||| ||||| ||||| |||||||||| ||||||||
Sbjct: 628 gatacgggagatctgcaggcctctgctgaacgcctggttgangagcatcct 678
>gb|BE492039.1|BE492039 WHE0552_B02_B02ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE0552_B02_B02, mRNA
sequence
Length = 524
Score = 46.1 bits (23), Expect = 0.004
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 183 ctgaaggcctggttgaacagcat 205
|||||||||||||||||||||||
Sbjct: 179 ctgaaggcctggttgaacagcat 157
>gb|CA604015.1|CA604015 wr1.pk0033.a10 wr1 Triticum aestivum cDNA clone wr1.pk0033.a10 5'
end, mRNA sequence
Length = 412
Score = 46.1 bits (23), Expect = 0.004
Identities = 56/67 (83%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 680 tatttcaagaacagtgccacgctttccagaatg-cctaagannctcctgctctttttccc 738
||||||||||| |||||||||| |||||||| || |||| | | |||||||| ||||
Sbjct: 306 tatttcaagaatgntgccacgcttcccagaatgcccgaagaggcccntgctctttgtccc 247
Query: 739 accatga 745
|||||||
Sbjct: 246 accatga 240
>gb|CA668899.1|CA668899 wlsu1.pk023.i2 wlsu1 Triticum aestivum cDNA clone wlsu1.pk023.i2 5'
end, mRNA sequence
Length = 500
Score = 44.1 bits (22), Expect = 0.015
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 165 gaaatctgcagacctctactgaaggcctggttgaacag 202
||||||| || |||||| ||||| ||||||||||||||
Sbjct: 355 gaaatctccaaacctctgctgaaagcctggttgaacag 392
>gb|BE428096.1|BE428096 MTD003.C04F990615 ITEC MTD Durum Wheat Root Library Triticum
turgidum subsp. durum cDNA clone MTD003.C04, mRNA
sequence
Length = 399
Score = 40.1 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 183 ctgaaggcctggttgaacag 202
||||||||||||||||||||
Sbjct: 252 ctgaaggcctggttgaacag 233
>gb|BJ274419.1|BJ274419 BJ274419 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh22b10 3', mRNA sequence
Length = 757
Score = 40.1 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 183 ctgaaggcctggttgaacag 202
||||||||||||||||||||
Sbjct: 286 ctgaaggcctggttgaacag 305
>gb|AL820316.1|AL820316 AL820316 N:130 Triticum aestivum cDNA clone H03_N130_plate_28, mRNA
sequence
Length = 437
Score = 40.1 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 183 ctgaaggcctggttgaacag 202
||||||||||||||||||||
Sbjct: 101 ctgaaggcctggttgaacag 82
>gb|CA499643.1|CA499643 WHE4009_G12_M23ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4009_G12_M23, mRNA sequence
Length = 554
Score = 40.1 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 183 ctgaaggcctggttgaacag 202
||||||||||||||||||||
Sbjct: 446 ctgaaggcctggttgaacag 427
>gb|CA660459.1|CA660459 wlm1.pk0019.f4 wlm1 Triticum aestivum cDNA clone wlm1.pk0019.f4 5'
end, mRNA sequence
Length = 515
Score = 40.1 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 183 ctgaaggcctggttgaacag 202
||||||||||||||||||||
Sbjct: 81 ctgaaggcctggttgaacag 100
>gb|CA667704.1|CA667704 wlsu1.pk017.p1 wlsu1 Triticum aestivum cDNA clone wlsu1.pk017.p1 5'
end, mRNA sequence
Length = 461
Score = 40.1 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 183 ctgaaggcctggttgaacag 202
||||||||||||||||||||
Sbjct: 334 ctgaaggcctggttgaacag 315
>gb|CD454191.1|CD454191 WHE0991-0994_B23_B23ZT CS wheat pre-anthesis spike cDNA library
Triticum aestivum cDNA clone WHE0991-0994_B23_B23, mRNA
sequence
Length = 762
Score = 40.1 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 183 ctgaaggcctggttgaacag 202
||||||||||||||||||||
Sbjct: 294 ctgaaggcctggttgaacag 313
>gb|CD938994.1|CD938994 OV.111N14F010309 OV Triticum aestivum cDNA clone OV111N14, mRNA
sequence
Length = 508
Score = 40.1 bits (20), Expect = 0.24
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 183 ctgaaggcctggttgaacag 202
||||||||||||||||||||
Sbjct: 161 ctgaaggcctggttgaacag 142
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 107,483
Number of Sequences: 636343
Number of extensions: 107483
Number of successful extensions: 27983
Number of sequences better than 0.5: 52
Number of HSP's better than 0.5 without gapping: 51
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 27895
Number of HSP's gapped (non-prelim): 85
length of query: 830
length of database: 367,240,239
effective HSP length: 19
effective length of query: 811
effective length of database: 355,149,722
effective search space: 288026424542
effective search space used: 288026424542
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)