BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2306429.2.1
(1175 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK204227.1|CK204227 FGAS012763 Triticum aestivum FGAS: L... 232 4e-059
gb|CK203901.1|CK203901 FGAS012436 Triticum aestivum FGAS: L... 224 1e-056
gb|CK194020.1|CK194020 FGAS002439 Triticum aestivum FGAS: L... 216 3e-054
gb|BQ237865.1|BQ237865 TaE05011C08F TaE05 Triticum aestivum... 208 6e-052
gb|CV768252.1|CV768252 FGAS062643 Triticum aestivum FGAS: L... 133 3e-029
gb|CA647598.1|CA647598 wre1n.pk0112.c5 wre1n Triticum aesti... 127 2e-027
gb|CA651482.1|CA651482 wre1n.pk177.e10 wre1n Triticum aesti... 115 7e-024
gb|CD928477.1|CD928477 GR45.104P06F010319 GR45 Triticum aes... 113 3e-023
gb|CA661459.1|CA661459 wlmk1.pk0001.d7 wlmk1 Triticum aesti... 84 3e-014
gb|CK196210.1|CK196210 FGAS004659 Triticum aestivum FGAS: L... 84 3e-014
gb|CA632642.1|CA632642 wle1n.pk0060.a2 wle1n Triticum aesti... 74 2e-011
gb|CD491409.1|CD491409 WHE3087_A06_A11ZT CS wheat cold-stre... 64 2e-008
gb|CA647287.1|CA647287 wre1n.pk0116.h1 wre1n Triticum aesti... 60 4e-007
gb|BE429853.1|BE429853 TAS004.E02R990616 ITEC TAS Wheat cDN... 58 1e-006
gb|BJ295816.1|BJ295816 BJ295816 Y. Ogihara unpublished cDNA... 58 1e-006
gb|CD864167.1|CD864167 AZO1.109F13F000829 AZO1 Triticum aes... 58 1e-006
gb|CD905845.1|CD905845 G468.103A18F010809 G468 Triticum aes... 58 1e-006
gb|AJ602763.1|AJ602763 AJ602763 T06 Triticum aestivum cDNA ... 58 1e-006
gb|CK162546.1|CK162546 FGAS015142 Triticum aestivum FGAS: L... 58 1e-006
gb|BE429450.1|BE429450 TAS000.C07R990618 ITEC TAS Wheat cDN... 56 6e-006
gb|BU099275.1|BU099275 WHE3305_F03_K05ZS Chinese Spring whe... 56 6e-006
gb|CA609684.1|CA609684 wr1.pk0111.b7 wr1 Triticum aestivum ... 56 6e-006
gb|CA620492.1|CA620492 wl1n.pk0057.d4 wl1n Triticum aestivu... 56 6e-006
gb|CA643335.1|CA643335 wre1n.pk0072.d5 wre1n Triticum aesti... 56 6e-006
gb|CD882667.1|CD882667 F1.110K22R010628 F1 Triticum aestivu... 56 6e-006
gb|CD938611.1|CD938611 OV.110H18R010406 OV Triticum aestivu... 56 6e-006
gb|AL811339.1|AL811339 AL811339 d:37 Triticum aestivum cDNA... 56 6e-006
gb|BJ261259.1|BJ261259 BJ261259 Y. Ogihara unpublished cDNA... 52 9e-005
gb|BQ168060.1|BQ168060 WHE0031.E05F990514ZK Cheyenne wheat ... 52 9e-005
gb|CD880379.1|CD880379 F1.001I23F001129 F1 Triticum aestivu... 52 9e-005
gb|CD938609.1|CD938609 OV.110H16R010406 OV Triticum aestivu... 52 9e-005
gb|AJ603831.1|AJ603831 AJ603831 T07 Triticum aestivum cDNA ... 52 9e-005
gb|AJ604366.1|AJ604366 AJ604366 T07 Triticum aestivum cDNA ... 52 9e-005
gb|BT009044.1| Triticum aestivum clone wdk5c.pk006.o4:fis, ... 52 9e-005
gb|BJ218914.1|BJ218914 BJ218914 Y. Ogihara unpublished cDNA... 50 4e-004
gb|CA664112.1|CA664112 wlmk1.pk036.d5 wlmk1 Triticum aestiv... 50 4e-004
gb|CA484453.1|CA484453 WHE4306_G02_M04ZS Wheat meiotic anth... 48 0.001
gb|BJ290807.1|BJ290807 BJ290807 Y. Ogihara unpublished cDNA... 46 0.005
gb|BU672156.1|BU672156 WHE3301_C05_E09ZS Chinese Spring whe... 46 0.005
gb|CA665709.1|CA665709 wlk1.pk0026.b8 wlk1 Triticum aestivu... 46 0.005
gb|BE591927.1|BE591927 WHE1651-1654_I19_I19ZS Wheat heat st... 44 0.022
gb|BU099644.1|BU099644 WHE3309_G11_M21ZS Chinese Spring whe... 44 0.022
gb|CA649930.1|CA649930 wre1n.pk0145.f3 wre1n Triticum aesti... 44 0.022
gb|CA651639.1|CA651639 wre1n.pk176.e11 wre1n Triticum aesti... 44 0.022
gb|CK163206.1|CK163206 FGAS015826 Triticum aestivum FGAS: L... 44 0.022
gb|CK163680.1|CK163680 FGAS016310 Triticum aestivum FGAS: L... 44 0.022
gb|CK194917.1|CK194917 FGAS003350 Triticum aestivum FGAS: L... 44 0.022
gb|BE604359.1|BE604359 WHE1405-1408_G02_G02ZS Wheat drought... 42 0.086
gb|BQ620368.1|BQ620368 TaLr1166H03R TaLr1 Triticum aestivum... 42 0.086
gb|AL823053.1|AL823053 AL823053 p:133 Triticum aestivum cDN... 42 0.086
gb|AL830478.1|AL830478 AL830478 q:343 Triticum aestivum cDN... 42 0.086
gb|BQ744069.1|BQ744069 WHE4111_D05_H09ZS Wheat salt-stresse... 42 0.086
gb|CA498544.1|CA498544 WHE3244_G06_N12ZT Wheat meiotic anth... 42 0.086
gb|CA644986.1|CA644986 wre1n.pk0085.f8 wre1n Triticum aesti... 42 0.086
gb|CA722592.1|CA722592 wds1c.pk004.e22.f wds1c Triticum mon... 42 0.086
gb|CD882666.1|CD882666 F1.110K22F010502 F1 Triticum aestivu... 42 0.086
gb|CD921760.1|CD921760 G750.001O08F010308 G750 Triticum aes... 42 0.086
gb|BJ209432.1|BJ209432 BJ209432 Y. Ogihara unpublished cDNA... 40 0.34
gb|BQ804745.1|BQ804745 WHE3558_D06_H12ZS Wheat developing g... 40 0.34
>gb|CK204227.1|CK204227 FGAS012763 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 812
Score = 232 bits (117), Expect = 4e-059
Identities = 317/383 (82%), Gaps = 3/383 (0%)
Strand = Plus / Plus
Query: 6 tgccgggatatctaccgttcagatcctgaatggaagatcattttacttaggtacttcaat 65
||||| ||||| ||||| |||||| |||| |||| |||||||||||||||||||||||
Sbjct: 282 tgccgtgatatataccggtcagattctgagtggagaatcattttacttaggtacttcaac 341
Query: 66 ccagttggtgctcatcctagtggatatcttggcgaggacccacgaggaattcccaacaat 125
|| ||||| ||||| || |||||||| ||||| || |||||||| ||| |||| |||||
Sbjct: 342 ccggttggggctcaccccagtggataccttggtgaagacccacgtggagttccaaacaac 401
Query: 126 cttatgccctatgttcagcaagttgcggttggtaggaggccagctctgacagttttagga 185
||||||||||| |||||||||||||| ||||| |||||||| | ||||| | || |||
Sbjct: 402 cttatgccctacgttcagcaagttgctgttgggaggaggccgtcagtgacaatctttgga 461
Query: 186 aatgactatgcaacaagagacgggactggggtccgagattacatccatgtggttgacctt 245
||| |||||||||| | ||| ||||| ||||| ||||||||||| |||||| |||| |||
Sbjct: 462 aataactatgcaactaaagatgggaccggggtacgagattacattcatgtgcttgatctt 521
Query: 246 gctgacggacatattgctgcattgcagaagctttttgaga---actctagcatagggtgt 302
||||| || |||||||||||| ||| |||||||||||| | |||| |||||| |||
Sbjct: 522 gctgaggggcatattgctgcactgcggaagctttttgatagttcgtctaacataggatgt 581
Query: 303 gaagcgtacaaccttggaaccggaagaggtacatctgtgctggagattgttaaagcattt 362
||| | ||||||||||| || |||| || || || ||| ||||||| || || |||| |
Sbjct: 582 gaaccatacaaccttgggactggaaaggggacgtcagtgttggagatagtcaatgcatat 641
Query: 363 gagaaggcttctgggaagaaaat 385
||||||||||||| ||||||||
Sbjct: 642 gagaaggcttctgcaaagaaaat 664
>gb|CK203901.1|CK203901 FGAS012436 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 858
Score = 224 bits (113), Expect = 1e-056
Identities = 316/383 (82%), Gaps = 3/383 (0%)
Strand = Plus / Plus
Query: 6 tgccgggatatctaccgttcagatcctgaatggaagatcattttacttaggtacttcaat 65
||||| ||||| ||||| |||||| |||| |||| |||||||||||||||||||||||
Sbjct: 281 tgccgtgatatataccggtcagattctgagtggagaatcattttacttaggtacttcaac 340
Query: 66 ccagttggtgctcatcctagtggatatcttggcgaggacccacgaggaattcccaacaat 125
|| ||||| ||||| || |||||||| ||||| || |||||||| ||| |||| |||||
Sbjct: 341 ccggttggggctcaccccagtggataccttggtgaagacccacgtggagttccaaacaac 400
Query: 126 cttatgccctatgttcagcaagttgcggttggtaggaggccagctctgacagttttagga 185
||||||||||| |||||||||||||| ||||| |||||||| | ||||| | || |||
Sbjct: 401 cttatgccctacgttcagcaagttgctgttgggaggaggccgtcagtgacaatctttgga 460
Query: 186 aatgactatgcaacaagagacgggactggggtccgagattacatccatgtggttgacctt 245
||| |||||||||| | ||| ||||| ||||| ||||||||||| |||||| |||| |||
Sbjct: 461 aataactatgcaactaaagatgggaccggggtacgagattacattcatgtgcttgatctt 520
Query: 246 gctgacggacatattgctgcattgcagaagctttttgaga---actctagcatagggtgt 302
||||| || |||||||||||| ||| ||||||| |||| | |||| |||||| |||
Sbjct: 521 gctgaggggcatattgctgcactgcggaagcttgttgatagttcgtctaacataggatgt 580
Query: 303 gaagcgtacaaccttggaaccggaagaggtacatctgtgctggagattgttaaagcattt 362
||| | ||||||||||| || |||| || || || ||| |||||| || || |||| |
Sbjct: 581 gaaccatacaaccttgggactggaaaggggacgtcagtgtaggagatagtcaatgcatat 640
Query: 363 gagaaggcttctgggaagaaaat 385
|||||||||||||| ||||||||
Sbjct: 641 gagaaggcttctggaaagaaaat 663
>gb|CK194020.1|CK194020 FGAS002439 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 840
Score = 216 bits (109), Expect = 3e-054
Identities = 315/383 (82%), Gaps = 3/383 (0%)
Strand = Plus / Plus
Query: 6 tgccgggatatctaccgttcagatcctgaatggaagatcattttacttaggtacttcaat 65
||||| ||||| ||||| |||||| |||| |||| |||||||||||||||||||||||
Sbjct: 266 tgccgtgatatataccggtcagattctgagtggagaatcattttacttaggtacttcaac 325
Query: 66 ccagttggtgctcatcctagtggatatcttggcgaggacccacgaggaattcccaacaat 125
|| ||||| ||||| || |||||||| ||||| || |||||||| ||| |||| |||||
Sbjct: 326 ccggttggggctcaccccagtggataccttggtgaagacccacgtggagttccaaacaac 385
Query: 126 cttatgccctatgttcagcaagttgcggttggtaggaggccagctctgacagttttagga 185
||||||||||| |||||||||||||| ||||| |||||||| | ||||| | || |||
Sbjct: 386 cttatgccctacgttcagcaagttgctgttgggaggaggccgtcagtgacaatctttgga 445
Query: 186 aatgactatgcaacaagagacgggactggggtccgagattacatccatgtggttgacctt 245
||| |||||||||| | ||| | ||| ||||| |||||||| || |||||| |||| |||
Sbjct: 446 aataactatgcaactaaagatgtgaccggggtacgagattatattcatgtgcttgatctt 505
Query: 246 gctgacggacatattgctgcattgcagaagctttttgaga---actctagcatagggtgt 302
||||| || |||||||||||| | | |||||||||||| | |||| |||||| |||
Sbjct: 506 gctgaggggcatattgctgcactacggaagctttttgatagttcgtctaacataggatgt 565
Query: 303 gaagcgtacaaccttggaaccggaagaggtacatctgtgctggagattgttaaagcattt 362
||| | ||||||||||| || |||| || || || ||| ||||||| || || |||||
Sbjct: 566 gaaccatacaaccttgggactggaaaggggacgtcagtgttggagatagtcaatgcattc 625
Query: 363 gagaaggcttctgggaagaaaat 385
|||||||||||||| ||||||||
Sbjct: 626 gagaaggcttctggaaagaaaat 648
>gb|BQ237865.1|BQ237865 TaE05011C08F TaE05 Triticum aestivum cDNA clone TaE05011C08F, mRNA
sequence
Length = 613
Score = 208 bits (105), Expect = 6e-052
Identities = 359/443 (81%), Gaps = 3/443 (0%)
Strand = Plus / Minus
Query: 129 atgccctatgttcagcaagttgcggttggtaggaggccagctctgacagttttaggaaat 188
|||||||| |||||||||||||| ||||| |||||||| | ||||| | || ||||||
Sbjct: 613 atgccctacgttcagcaagttgctgttgggaggaggccgtcagtgacaatctttggaaat 554
Query: 189 gactatgcaacaagagacgggactggggtccgagattacatccatgtggttgaccttgct 248
|||||||||| | ||| ||||| ||||| ||||||||||| |||||| |||| ||||||
Sbjct: 553 aactatgcaactaaagatgggaccggggtacgagattacattcatgtgcttgatcttgct 494
Query: 249 gacggacatattgctgcattgcagaagctttttgaga---actctagcatagggtgtgaa 305
|| || |||||||||||| ||| |||||||||||| | |||| |||||| ||||||
Sbjct: 493 gaggggcatattgctgcactgcggaagctttttgatagttcgtctaacataggatgtgaa 434
Query: 306 gcgtacaaccttggaaccggaagaggtacatctgtgctggagattgttaaagcatttgag 365
| ||||||||||| || |||| || || || ||| ||||||| || || |||||||||
Sbjct: 433 ccatacaaccttgggactggaaaggggacgtcagtgttggagatagtcaatgcatttgag 374
Query: 366 aaggcttctgggaagaaaatacctctgatttttggtgaaaggcgcccaggtgatgcagag 425
||||||||||| |||||||| || ||| | | ||| | | ||||| |||||||| |||
Sbjct: 373 aaggcttctggaaagaaaatcccgctggtcatcggtcagcgccgccctggtgatgccgag 314
Query: 426 attctgttttcagagactactaaagcagagagggagcttaactggaaagcaaaatacggt 485
||||| ||| ||| ||| ||||||||||| || || ||||||||||||||||| ||
Sbjct: 313 attctctttgcaggaactggcaaagcagagagagaactcaactggaaagcaaaatatggc 254
Query: 486 attgaagagatgtgccgcgaccaatggaactgggccagcaagaacccttatggctatgga 545
|| ||||||||| | ||||| ||||||||||| |||||||||||||| || || ||
Sbjct: 253 atcacggagatgtgcagggaccagtggaactgggctagcaagaacccttacgggtacggg 194
Query: 546 tcacctgactctatcaagcagaa 568
||||| ||||| | |||||||||
Sbjct: 193 tcacccgactcgaccaagcagaa 171
>gb|CV768252.1|CV768252 FGAS062643 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 822
Score = 133 bits (67), Expect = 3e-029
Identities = 264/329 (80%), Gaps = 3/329 (0%)
Strand = Plus / Plus
Query: 243 cttgctgacggacatattgctgcattgcagaagctttttgagaactc---tagcataggg 299
|||||||| || |||||||||||| ||| |||||||||||| | || || ||||||
Sbjct: 111 cttgctgaggggcatattgctgcactgcggaagctttttgatagttcgtctaacatagga 170
Query: 300 tgtgaagcgtacaaccttggaaccggaagaggtacatctgtgctggagattgttaaagca 359
|||||| | ||||||||||| || |||| || || || ||| ||||||| || || |||
Sbjct: 171 tgtgaaccatacaaccttgggactggaaaggggacgtcagtgttggagatagtcaatgca 230
Query: 360 tttgagaaggcttctgggaagaaaatacctctgatttttggtgaaaggcgcccaggtgat 419
||||||||||||||||| |||||||| || ||| | | ||| | | ||||| ||||||
Sbjct: 231 tttgagaaggcttctggaaagaaaatcccgctggtcatcggtcagcgccgccctggtgat 290
Query: 420 gcagagattctgttttcagagactactaaagcagagagggagcttaactggaaagcaaaa 479
|| |||||||| ||| ||| ||| ||||||||||| || || |||||||||||||||
Sbjct: 291 gccgagattctctttgcaggaactggcaaagcagagagagaactcaactggaaagcaaaa 350
Query: 480 tacggtattgaagagatgtgccgcgaccaatggaactgggccagcaagaacccttatggc 539
|| || || ||||||||| | ||||| ||||||||||| |||||||||||||| ||
Sbjct: 351 tatggcatcacggagatgtgcagggaccagtggaactgggctagcaagaacccttacggg 410
Query: 540 tatggatcacctgactctatcaagcagaa 568
|| || ||||| ||||| | |||||||||
Sbjct: 411 tacgggtcacccgactcgaccaagcagaa 439
>gb|CA647598.1|CA647598 wre1n.pk0112.c5 wre1n Triticum aestivum cDNA clone wre1n.pk0112.c5
5' end, mRNA sequence
Length = 367
Score = 127 bits (64), Expect = 2e-027
Identities = 155/184 (84%), Gaps = 1/184 (0%)
Strand = Plus / Plus
Query: 84 agtggatatcttggcgaggacccacgaggaattcccaacaatcttatgccctatgttcag 143
|||||||| ||||| || |||||||| ||| |||| ||||| ||||||||||| ||||||
Sbjct: 10 agtggataccttggtgaagacccacgtggagttccaaacaaccttatgccctacgttcag 69
Query: 144 caagttgcggttggtaggaggccagctctgacagttttaggaaatgactatgcaacaaga 203
|||||||| ||||| |||||||| | ||||| | || |||||| |||||||||| | |
Sbjct: 70 caagttgctgttgggaggaggccgtcagtgacaatctttggaaataactatgcaactaaa 129
Query: 204 gacgggactggggtccgagattacatccatgtggtt-gaccttgctgacggacatattgc 262
|| ||||||||||| |||||||| || |||||| || || |||||||| || ||||||||
Sbjct: 130 gatgggactggggtacgagattatattcatgtgcttggatcttgctgaggggcatattgc 189
Query: 263 tgca 266
||||
Sbjct: 190 tgca 193
>gb|CA651482.1|CA651482 wre1n.pk177.e10 wre1n Triticum aestivum cDNA clone wre1n.pk177.e10
5' end, mRNA sequence
Length = 346
Score = 115 bits (58), Expect = 7e-024
Identities = 141/169 (83%)
Strand = Plus / Plus
Query: 115 ttcccaacaatcttatgccctatgttcagcaagttgcggttggtaggaggccagctctga 174
|||| ||||| ||||||||||| |||||||||||||| ||||| |||||||| | |||
Sbjct: 9 ttccaaacaaccttatgccctacgttcagcaagttgctgttgggaggaggccgtcagtga 68
Query: 175 cagttttaggaaatgactatgcaacaagagacgggactggggtccgagattacatccatg 234
|| | || |||||| ||||||||| | ||| ||||| ||||| |||||||| || ||||
Sbjct: 69 caatctttggaaatanctatgcaactaaagatgggaccggggtacgagattatattcatg 128
Query: 235 tggttgaccttgctgacggacatattgctgcattgcagaagctttttga 283
|| |||| |||||||| || |||||||||||| | | ||||||||||||
Sbjct: 129 tgcttgatcttgctgaggggcatattgctgcactacggaagctttttga 177
>gb|CD928477.1|CD928477 GR45.104P06F010319 GR45 Triticum aestivum cDNA clone GR45104P06,
mRNA sequence
Length = 465
Score = 113 bits (57), Expect = 3e-023
Identities = 225/281 (80%)
Strand = Plus / Plus
Query: 288 tctagcatagggtgtgaagcgtacaaccttggaaccggaagaggtacatctgtgctggag 347
|||| |||||| |||||| | ||||||||||| || |||| || || || ||| |||||
Sbjct: 22 tctaacataggatgtgaaccatacaaccttgggactggaaaggggacgtcagtgttggag 81
Query: 348 attgttaaagcatttgagaaggcttctgggaagaaaatacctctgatttttggtgaaagg 407
|| || || ||||| |||||||||||||| |||||||| || ||| | | ||| | |
Sbjct: 82 atagtcaatgcattcgagaaggcttctggaaagaaaatcccgctggtcatcggtcagcgc 141
Query: 408 cgcccaggtgatgcagagattctgttttcagagactactaaagcagagagggagcttaac 467
||||| |||||||| |||||||| ||| ||| ||| |||||||||||| || || |||
Sbjct: 142 cgccctggtgatgccgagattctctttgcaggaactggtaaagcagagagagaactcaac 201
Query: 468 tggaaagcaaaatacggtattgaagagatgtgccgcgaccaatggaactgggccagcaag 527
|||||||| || || || || ||||||||| | ||||| ||||||||||| ||||||
Sbjct: 202 tggaaagcgaagtatggcatcacggagatgtgcagggaccagtggaactgggctagcaag 261
Query: 528 aacccttatggctatggatcacctgactctatcaagcagaa 568
|||||||| || ||||| ||||| ||||| | |||||||||
Sbjct: 262 aacccttacgggtatgggtcacccgactcgaccaagcagaa 302
>gb|CA661459.1|CA661459 wlmk1.pk0001.d7 wlmk1 Triticum aestivum cDNA clone wlmk1.pk0001.d7
5' end, mRNA sequence
Length = 590
Score = 83.8 bits (42), Expect = 3e-014
Identities = 102/122 (83%)
Strand = Plus / Minus
Query: 447 aaagcagagagggagcttaactggaaagcaaaatacggtattgaagagatgtgccgcgac 506
||||||||||| || || ||||||||||||||||| || || ||||||||| | |||
Sbjct: 383 aaagcagagagagaactcaactggaaagcaaaatatggcatcacggagatgtgcagggac 324
Query: 507 caatggaactgggccagcaagaacccttatggctatggatcacctgactctatcaagcag 566
|| ||||||||||| |||||||||||||| || || || ||||| ||||| | |||||||
Sbjct: 323 cagtggaactgggctagcaagaacccttacgggtacgggtcacccgactcgaccaagcag 264
Query: 567 aa 568
||
Sbjct: 263 aa 262
>gb|CK196210.1|CK196210 FGAS004659 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 851
Score = 83.8 bits (42), Expect = 3e-014
Identities = 102/122 (83%)
Strand = Plus / Minus
Query: 447 aaagcagagagggagcttaactggaaagcaaaatacggtattgaagagatgtgccgcgac 506
||||||||||| || || ||||||||||||||||| || || ||||||||| | |||
Sbjct: 650 aaagcagagagagaactcaactggaaagcaaaatatggcataacggagatgtgcagggac 591
Query: 507 caatggaactgggccagcaagaacccttatggctatggatcacctgactctatcaagcag 566
|| ||||||||||| |||||||||||||| || || || ||||| ||||| | |||||||
Sbjct: 590 cagtggaactgggctagcaagaacccttacgggtacgggtcacccgactcgaccaagcag 531
Query: 567 aa 568
||
Sbjct: 530 aa 529
>gb|CA632642.1|CA632642 wle1n.pk0060.a2 wle1n Triticum aestivum cDNA clone wle1n.pk0060.a2
5' end, mRNA sequence
Length = 212
Score = 73.8 bits (37), Expect = 2e-011
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 492 gagatgtgccgcgaccaatggaactgggccagcaagaacccttatggctatggatcacct 551
||||||||| | ||||| ||||||||||| |||||||||||||| || ||||| |||||
Sbjct: 6 gagatgtgcagggaccagtggaactgggctagcaagaacccttacgggtatgggtcaccc 65
Query: 552 gactctatcaagcagaa 568
||||| | |||||||||
Sbjct: 66 gactcgaccaagcagaa 82
>gb|CD491409.1|CD491409 WHE3087_A06_A11ZT CS wheat cold-stressed seedling subtracted cDNA
library Triticum aestivum cDNA clone WHE3087_A06_A11,
mRNA sequence
Length = 697
Score = 63.9 bits (32), Expect = 2e-008
Identities = 155/196 (79%)
Strand = Plus / Minus
Query: 379 agaaaatacctctgatttttggtgaaaggcgcccaggtgatgcagagattctgttttcag 438
||||||||||| || || ||||| | | ||||| |||||||| |||||||| |||||
Sbjct: 562 agaaaatacctttggttattggtccacgacgccctggtgatgctgagattctcttttcgt 503
Query: 439 agactactaaagcagagagggagcttaactggaaagcaaaatacggtattgaagagatgt 498
|| ||||||||||||| || | || ||||| |||||||| || || | ||| ||||
Sbjct: 502 cagctgctaaagcagagagagaattcaagtggaaggcaaaatatggcatcggagaaatgt 443
Query: 499 gccgcgaccaatggaactgggccagcaagaacccttatggctatggatcacctgactcta 558
|| | ||||||||||||||||| |||||||| |||| || || | || || ||||| |
Sbjct: 442 gcagagaccaatggaactgggcgagcaagaatcctttcgggtacgcctcgcccgactcca 383
Query: 559 tcaagcagaatggtca 574
|||||||||||||||
Sbjct: 382 ccaagcagaatggtca 367
>gb|CA647287.1|CA647287 wre1n.pk0116.h1 wre1n Triticum aestivum cDNA clone wre1n.pk0116.h1
5' end, mRNA sequence
Length = 290
Score = 60.0 bits (30), Expect = 4e-007
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 288 tctagcatagggtgtgaagcgtacaaccttggaaccggaagaggtacatctgtgctggag 347
|||| |||||| |||||| | ||||||||||| || |||| || || || ||| |||||
Sbjct: 11 tctaacataggatgtgaaccatacaaccttgggactggaaaggggacgtcagtgttggag 70
Query: 348 attgttaaagcatttgagaaggcttctgggaagaaaat 385
|| || || ||||| |||||||||||||| ||||||||
Sbjct: 71 atagtcaatgcattcgagaaggcttctggaaagaaaat 108
>gb|BE429853.1|BE429853 TAS004.E02R990616 ITEC TAS Wheat cDNA Library Triticum aestivum
cDNA clone TAS004.E02, mRNA sequence
Length = 512
Score = 58.0 bits (29), Expect = 1e-006
Identities = 83/101 (82%)
Strand = Plus / Minus
Query: 447 aaagcagagagggagcttaactggaaagcaaaatacggtattgaagagatgtgccgcgac 506
|||||||||| |||||| || ||||| || || || || | || ||||||||| | |||
Sbjct: 473 aaagcagagaaggagctcaagtggaaggccaagtatggggtggaggagatgtgcagagac 414
Query: 507 caatggaactgggccagcaagaacccttatggctatggatc 547
| ||||||||||||||||||||||| || ||||| |||||
Sbjct: 413 ctgtggaactgggccagcaagaacccctacggctacggatc 373
>gb|BJ295816.1|BJ295816 BJ295816 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl5j02 3', mRNA sequence
Length = 606
Score = 58.0 bits (29), Expect = 1e-006
Identities = 83/101 (82%)
Strand = Plus / Minus
Query: 447 aaagcagagagggagcttaactggaaagcaaaatacggtattgaagagatgtgccgcgac 506
|||||||||| |||||| || ||||| || || || || | || ||||||||| | |||
Sbjct: 430 aaagcagagaaggagctcaagtggaaggccaagtatggggtggaggagatgtgcagagac 371
Query: 507 caatggaactgggccagcaagaacccttatggctatggatc 547
| ||||||||||||||||||||||| || ||||| |||||
Sbjct: 370 ctgtggaactgggccagcaagaacccctacggctacggatc 330
>gb|CD864167.1|CD864167 AZO1.109F13F000829 AZO1 Triticum aestivum cDNA clone AZO1109F13,
mRNA sequence
Length = 580
Score = 58.0 bits (29), Expect = 1e-006
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 447 aaagcagagagggagcttaactggaaagcaaaatacggtattgaagagatgtgccgcgac 506
|||||||||| |||||| || ||||| || || || || | || ||||||||| | |||
Sbjct: 145 aaagcagagaaggagctcaagtggaaggccaagtatggggtggaggagatgtgcagagac 204
Query: 507 caatggaactgggccagcaagaacccttatggctatggatc 547
| ||||||||||||||||||||||| || ||||| |||||
Sbjct: 205 ctgtggaactgggccagcaagaacccctacggctacggatc 245
>gb|CD905845.1|CD905845 G468.103A18F010809 G468 Triticum aestivum cDNA clone G468103A18,
mRNA sequence
Length = 526
Score = 58.0 bits (29), Expect = 1e-006
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 447 aaagcagagagggagcttaactggaaagcaaaatacggtattgaagagatgtgccgcgac 506
|||||||||| |||||| || ||||| || || || || | || ||||||||| | |||
Sbjct: 260 aaagcagagaaggagctcaagtggaaggccaagtatggggtggaggagatgtgcagagac 319
Query: 507 caatggaactgggccagcaagaacccttatggctatggatc 547
| ||||||||||||||||||||||| || ||||| |||||
Sbjct: 320 ctgtggaactgggccagcaagaacccctacggctacggatc 360
>gb|AJ602763.1|AJ602763 AJ602763 T06 Triticum aestivum cDNA clone E06_T06_plate_25, mRNA
sequence
Length = 269
Score = 58.0 bits (29), Expect = 1e-006
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 447 aaagcagagagggagcttaactggaaagcaaaatacggtattgaagagatgtgccgcgac 506
|||||||||| |||||| || ||||| || || || || | || ||||||||| | |||
Sbjct: 36 aaagcagagaaggagctcaagtggaaggccaagtatggggtggaggagatgtgcagagac 95
Query: 507 caatggaactgggccagcaagaacccttatggctatggatc 547
| ||||||||||||||||||||||| || ||||| |||||
Sbjct: 96 ctgtggaactgggccagcaagaacccctacggctacggatc 136
>gb|CK162546.1|CK162546 FGAS015142 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1091
Score = 58.0 bits (29), Expect = 1e-006
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 447 aaagcagagagggagcttaactggaaagcaaaatacggtattgaagagatgtgccgcgac 506
|||||||||| |||||| || ||||| || || || || | || ||||||||| | |||
Sbjct: 699 aaagcagagaaggagctcaagtggaaggccaagtatggggtggaggagatgtgcagagac 758
Query: 507 caatggaactgggccagcaagaacccttatggctatggatc 547
| ||||||||||||||||||||||| || ||||| |||||
Sbjct: 759 ctgtggaactgggccagcaagaacccctacggctacggatc 799
Score = 46.1 bits (23), Expect = 0.005
Identities = 80/99 (80%)
Strand = Plus / Plus
Query: 294 atagggtgtgaagcgtacaaccttggaaccggaagaggtacatctgtgctggagattgtt 353
|||||||| |||| |||||| || || || |||| || ||||| ||||||||||| |||
Sbjct: 546 atagggtgcgaagtgtacaatctgggcactggaaaggggacatccgtgctggagatggtt 605
Query: 354 aaagcatttgagaaggcttctgggaagaaaatacctctg 392
||||| |||||||||| || |||||||| ||||||
Sbjct: 606 gccgcattcgagaaggcttgcggaaagaaaatccctctg 644
Score = 42.1 bits (21), Expect = 0.086
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 225 tacatccatgtggttgaccttgctgacgg 253
||||||||||| |||||||| ||||||||
Sbjct: 474 tacatccatgttgttgacctggctgacgg 502
Score = 40.1 bits (20), Expect = 0.34
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 117 cccaacaatcttatgccctatgttcagcaagt 148
|||||||| || ||||||||||| ||||||||
Sbjct: 366 cccaacaacctgatgccctatgtccagcaagt 397
>gb|BE429450.1|BE429450 TAS000.C07R990618 ITEC TAS Wheat cDNA Library Triticum aestivum
cDNA clone TAS000.C07, mRNA sequence
Length = 486
Score = 56.0 bits (28), Expect = 6e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 492 gagatgtgccgcgaccaatggaactgggccagcaagaacccttatggctatggatc 547
||||||||| | |||| ||||||||||||||||||||||| || ||||| |||||
Sbjct: 119 gagatgtgcagagacctgtggaactgggccagcaagaacccctacggctacggatc 174
>gb|BU099275.1|BU099275 WHE3305_F03_K05ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3305_F03_K05,
mRNA sequence
Length = 544
Score = 56.0 bits (28), Expect = 6e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 492 gagatgtgccgcgaccaatggaactgggccagcaagaacccttatggctatggatc 547
||||||||| | |||| ||||||||||||||||||||||| || ||||| |||||
Sbjct: 367 gagatgtgcagagacctgtggaactgggccagcaagaacccctacggctacggatc 312
>gb|CA609684.1|CA609684 wr1.pk0111.b7 wr1 Triticum aestivum cDNA clone wr1.pk0111.b7 5'
end, mRNA sequence
Length = 568
Score = 56.0 bits (28), Expect = 6e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 492 gagatgtgccgcgaccaatggaactgggccagcaagaacccttatggctatggatc 547
||||||||| | |||| ||||||||||||||||||||||| || ||||| |||||
Sbjct: 171 gagatgtgcagagacctgtggaactgggccagcaagaacccctacggctacggatc 226
>gb|CA620492.1|CA620492 wl1n.pk0057.d4 wl1n Triticum aestivum cDNA clone wl1n.pk0057.d4 5'
end, mRNA sequence
Length = 571
Score = 56.0 bits (28), Expect = 6e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 492 gagatgtgccgcgaccaatggaactgggccagcaagaacccttatggctatggatc 547
||||||||| | |||| ||||||||||||||||||||||| || ||||| |||||
Sbjct: 170 gagatgtgcagagacctgtggaactgggccagcaagaacccctacggctacggatc 225
>gb|CA643335.1|CA643335 wre1n.pk0072.d5 wre1n Triticum aestivum cDNA clone wre1n.pk0072.d5
5' end, mRNA sequence
Length = 598
Score = 56.0 bits (28), Expect = 6e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 492 gagatgtgccgcgaccaatggaactgggccagcaagaacccttatggctatggatc 547
||||||||| | |||| ||||||||||||||||||||||| || ||||| |||||
Sbjct: 221 gagatgtgcagagacctgtggaactgggccagcaagaacccctacggctacggatc 276
>gb|CD882667.1|CD882667 F1.110K22R010628 F1 Triticum aestivum cDNA clone F1110K22, mRNA
sequence
Length = 588
Score = 56.0 bits (28), Expect = 6e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 492 gagatgtgccgcgaccaatggaactgggccagcaagaacccttatggctatggatc 547
||||||||| | |||| ||||||||||||||||||||||| || ||||| |||||
Sbjct: 382 gagatgtgcagagacctgtggaactgggccagcaagaacccctacggctacggatc 327
>gb|CD938611.1|CD938611 OV.110H18R010406 OV Triticum aestivum cDNA clone OV110H18, mRNA
sequence
Length = 607
Score = 56.0 bits (28), Expect = 6e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 492 gagatgtgccgcgaccaatggaactgggccagcaagaacccttatggctatggatc 547
||||||||| | |||| ||||||||||||||||||||||| || ||||| |||||
Sbjct: 397 gagatgtgcagagacctgtggaactgggccagcaagaacccctacggctacggatc 342
>gb|AL811339.1|AL811339 AL811339 d:37 Triticum aestivum cDNA clone G06_d37_plate_4, mRNA
sequence
Length = 423
Score = 56.0 bits (28), Expect = 6e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 492 gagatgtgccgcgaccaatggaactgggccagcaagaacccttatggctatggatc 547
||||||||| | |||| ||||||||||||||||||||||| || ||||| |||||
Sbjct: 146 gagatgtgcagagacctgtggaactgggccagcaagaacccctacggctacggatc 201
>gb|BJ261259.1|BJ261259 BJ261259 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh2c08 3', mRNA sequence
Length = 671
Score = 52.0 bits (26), Expect = 9e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 492 gagatgtgccgcgaccaatggaactgggccagcaagaacccttatggcta 541
||||||||| | ||||| ||||||||||||| |||||||| ||||||||
Sbjct: 290 gagatgtgcagggaccagtggaactgggccaagaagaacccgtatggcta 241
>gb|BQ168060.1|BQ168060 WHE0031.E05F990514ZK Cheyenne wheat endosperm cDNA library Triticum
aestivum cDNA clone WHE0031.E05F990514, mRNA sequence
Length = 583
Score = 52.0 bits (26), Expect = 9e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 492 gagatgtgccgcgaccaatggaactgggccagcaagaacccttatggcta 541
||||||||| | ||||| ||||||||||||| |||||||| ||||||||
Sbjct: 413 gagatgtgcagggaccagtggaactgggccaagaagaacccgtatggcta 364
>gb|CD880379.1|CD880379 F1.001I23F001129 F1 Triticum aestivum cDNA clone F1001I23, mRNA
sequence
Length = 661
Score = 52.0 bits (26), Expect = 9e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 510 tggaactgggccagcaagaacccttatggctatggatc 547
||||||||||||||||||||||| || ||||| |||||
Sbjct: 385 tggaactgggccagcaagaacccctacggctacggatc 422
Score = 46.1 bits (23), Expect = 0.005
Identities = 80/99 (80%)
Strand = Plus / Plus
Query: 294 atagggtgtgaagcgtacaaccttggaaccggaagaggtacatctgtgctggagattgtt 353
|||||||| |||| |||||| || || || |||| || ||||| ||||||||||| |||
Sbjct: 169 atagggtgcgaagtgtacaatctgggcactggaaaggggacatccgtgctggagatggtt 228
Query: 354 aaagcatttgagaaggcttctgggaagaaaatacctctg 392
||||| |||||||||| || |||||||| ||||||
Sbjct: 229 gccgcattcgagaaggcttgcggaaagaaaatccctctg 267
Score = 42.1 bits (21), Expect = 0.086
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 225 tacatccatgtggttgaccttgctgacgg 253
||||||||||| |||||||| ||||||||
Sbjct: 97 tacatccatgttgttgacctggctgacgg 125
>gb|CD938609.1|CD938609 OV.110H16R010406 OV Triticum aestivum cDNA clone OV110H16, mRNA
sequence
Length = 508
Score = 52.0 bits (26), Expect = 9e-005
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 510 tggaactgggccagcaagaacccttatggctatggatc 547
||||||||||||||||||||||| || ||||| |||||
Sbjct: 378 tggaactgggccagcaagaacccctacggctacggatc 341
>gb|AJ603831.1|AJ603831 AJ603831 T07 Triticum aestivum cDNA clone G01_T07_plate_19, mRNA
sequence
Length = 299
Score = 52.0 bits (26), Expect = 9e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 492 gagatgtgccgcgaccaatggaactgggccagcaagaacccttatggcta 541
||||||||| | ||||| ||||||||||||| |||||||| ||||||||
Sbjct: 184 gagatgtgcagggaccagtggaactgggccaagaagaacccgtatggcta 233
>gb|AJ604366.1|AJ604366 AJ604366 T07 Triticum aestivum cDNA clone E12_T07_plate_33, mRNA
sequence
Length = 444
Score = 52.0 bits (26), Expect = 9e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 492 gagatgtgccgcgaccaatggaactgggccagcaagaacccttatggcta 541
||||||||| | ||||| ||||||||||||| |||||||| ||||||||
Sbjct: 94 gagatgtgcagggaccagtggaactgggccaagaagaacccgtatggcta 143
>gb|BT009044.1| Triticum aestivum clone wdk5c.pk006.o4:fis, full insert mRNA sequence
Length = 1516
Score = 52.0 bits (26), Expect = 9e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 492 gagatgtgccgcgaccaatggaactgggccagcaagaacccttatggcta 541
||||||||| | ||||| ||||||||||||| |||||||| ||||||||
Sbjct: 979 gagatgtgcagggaccagtggaactgggccaagaagaacccgtatggcta 1028
>gb|BJ218914.1|BJ218914 BJ218914 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh30o16 3', mRNA sequence
Length = 463
Score = 50.1 bits (25), Expect = 4e-004
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 492 gagatgtgccgcgaccaatggaactgggccagcaagaacccttatggctatggatc 547
||||||||| | |||| ||||| ||||||||||||||||| || ||||| |||||
Sbjct: 391 gagatgtgcagagacctgtggaantgggccagcaagaacccctacggctacggatc 336
>gb|CA664112.1|CA664112 wlmk1.pk036.d5 wlmk1 Triticum aestivum cDNA clone wlmk1.pk036.d5 5'
end, mRNA sequence
Length = 513
Score = 50.1 bits (25), Expect = 4e-004
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 492 gagatgtgccgcgaccaatggaactgggccagcaagaacccttatggct 540
||||||||| | ||||| ||||||||||||| |||||||| |||||||
Sbjct: 226 gagatgtgcagggaccagtggaactgggccaagaagaacccctatggct 178
>gb|CA484453.1|CA484453 WHE4306_G02_M04ZS Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4306_G02_M04, mRNA sequence
Length = 597
Score = 48.1 bits (24), Expect = 0.001
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 468 tggaaagcaaaatacggtattgaagagatgtgccgcgaccaatggaactgggccagcaag 527
||||| ||||||||||| || || ||||||||| | || | ||||| ||||| ||||||
Sbjct: 186 tggaaggcaaaatacgggatcgaggagatgtgcagagatctgtggaattgggcaagcaag 245
Query: 528 aacccttatggctatg 543
||||| || |||||||
Sbjct: 246 aacccatacggctatg 261
Score = 42.1 bits (21), Expect = 0.086
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 357 gcatttgagaaggcttctgggaagaaaat 385
||||| ||||||| |||||||||||||||
Sbjct: 75 gcattcgagaaggtttctgggaagaaaat 103
>gb|BJ290807.1|BJ290807 BJ290807 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl20f04 5', mRNA sequence
Length = 414
Score = 46.1 bits (23), Expect = 0.005
Identities = 80/99 (80%)
Strand = Plus / Plus
Query: 294 atagggtgtgaagcgtacaaccttggaaccggaagaggtacatctgtgctggagattgtt 353
||||||||||||| |||||| || || || |||| || || || ||||||||||| |||
Sbjct: 266 atagggtgtgaagtgtacaatctgggcactggaaaggggacgtccgtgctggagatggtt 325
Query: 354 aaagcatttgagaaggcttctgggaagaaaatacctctg 392
||||| |||||||||| || |||||||| ||||||
Sbjct: 326 gccgcattcgagaaggcttgcggaaagaaaatccctctg 364
Score = 42.1 bits (21), Expect = 0.086
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 225 tacatccatgtggttgaccttgctgacgg 253
||||||||||| |||||||| ||||||||
Sbjct: 194 tacatccatgttgttgacctggctgacgg 222
Score = 40.1 bits (20), Expect = 0.34
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 117 cccaacaatcttatgccctatgttcagcaagt 148
|||||||| || ||||||||||| ||||||||
Sbjct: 86 cccaacaacctgatgccctatgtccagcaagt 117
>gb|BU672156.1|BU672156 WHE3301_C05_E09ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3301_C05_E09,
mRNA sequence
Length = 621
Score = 46.1 bits (23), Expect = 0.005
Identities = 80/99 (80%)
Strand = Plus / Plus
Query: 294 atagggtgtgaagcgtacaaccttggaaccggaagaggtacatctgtgctggagattgtt 353
|||||||| |||| |||||| || || || |||| || ||||| ||||||||||| |||
Sbjct: 446 atagggtgcgaagtgtacaatctgggcactggaaaggggacatccgtgctggagatggtt 505
Query: 354 aaagcatttgagaaggcttctgggaagaaaatacctctg 392
||||| |||||||||| || |||||||| ||||||
Sbjct: 506 gccgcattcgagaaggcttgcggaaagaaaatccctctg 544
Score = 42.1 bits (21), Expect = 0.086
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 225 tacatccatgtggttgaccttgctgacgg 253
||||||||||| |||||||| ||||||||
Sbjct: 374 tacatccatgttgttgacctggctgacgg 402
Score = 40.1 bits (20), Expect = 0.34
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 117 cccaacaatcttatgccctatgttcagcaagt 148
|||||||| || ||||||||||| ||||||||
Sbjct: 266 cccaacaacctgatgccctatgtccagcaagt 297
>gb|CA665709.1|CA665709 wlk1.pk0026.b8 wlk1 Triticum aestivum cDNA clone wlk1.pk0026.b8 5'
end, mRNA sequence
Length = 463
Score = 46.1 bits (23), Expect = 0.005
Identities = 80/99 (80%)
Strand = Plus / Plus
Query: 294 atagggtgtgaagcgtacaaccttggaaccggaagaggtacatctgtgctggagattgtt 353
|||||||| |||| |||||| || || || |||| || ||||| ||||||||||| |||
Sbjct: 93 atagggtgcgaagtgtacaatctgggcactggaaaggggacatccgtgctggagatggtt 152
Query: 354 aaagcatttgagaaggcttctgggaagaaaatacctctg 392
||||| |||||||||| || |||||||| ||||||
Sbjct: 153 gccgcattcgagaaggcttgcggaaagaaaatccctctg 191
Score = 42.1 bits (21), Expect = 0.086
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 225 tacatccatgtggttgaccttgctgacgg 253
||||||||||| |||||||| ||||||||
Sbjct: 21 tacatccatgttgttgacctggctgacgg 49
>gb|BE591927.1|BE591927 WHE1651-1654_I19_I19ZS Wheat heat stressed flag leaf cDNA library
Triticum aestivum cDNA clone WHE1651-1654_I19_I19, mRNA
sequence
Length = 449
Score = 44.1 bits (22), Expect = 0.022
Identities = 70/86 (81%)
Strand = Plus / Minus
Query: 447 aaagcagagagggagcttaactggaaagcaaaatacggtattgaagagatgtgccgcgac 506
|||||||||| |||||| || ||||| || || || || | || ||||||||| | |||
Sbjct: 421 aaagcagagaaggagctcaagtggaaggccaagtatggggtggaggagatgtgcagagac 362
Query: 507 caatggaactgggccagcaagaaccc 532
| ||||| |||||||||||||||||
Sbjct: 361 ctgtggaaatgggccagcaagaaccc 336
>gb|BU099644.1|BU099644 WHE3309_G11_M21ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3309_G11_M21,
mRNA sequence
Length = 606
Score = 44.1 bits (22), Expect = 0.022
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 492 gagatgtgccgcgaccaatggaactgggccagcaagaacccttatggcta 541
||||||||| | ||||| ||||||||||||| |||||||| || |||||
Sbjct: 387 gagatgtgcagggaccagtggaactgggccaagaagaacccgtacggcta 338
>gb|CA649930.1|CA649930 wre1n.pk0145.f3 wre1n Triticum aestivum cDNA clone wre1n.pk0145.f3
5' end, mRNA sequence
Length = 245
Score = 44.1 bits (22), Expect = 0.022
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 492 gagatgtgccgcgaccaatggaactgggccagcaagaacccttatggcta 541
||||||||| | ||||| ||||||||||||| |||||||| || |||||
Sbjct: 22 gagatgtgcagggaccagtggaactgggccaagaagaacccgtacggcta 71
>gb|CA651639.1|CA651639 wre1n.pk176.e11 wre1n Triticum aestivum cDNA clone wre1n.pk176.e11
5' end, mRNA sequence
Length = 266
Score = 44.1 bits (22), Expect = 0.022
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 492 gagatgtgccgcgaccaatggaactgggccagcaagaacccttatggcta 541
||||||||| | ||||| ||||||||||||| |||||||| || |||||
Sbjct: 22 gagatgtgcagggaccagtggaactgggccaagaagaacccgtacggcta 71
>gb|CK163206.1|CK163206 FGAS015826 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1090
Score = 44.1 bits (22), Expect = 0.022
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 208 ggactggggtccgagattacatccatgtggttgaccttgctgacgg 253
|||| ||||| || || ||||||||||| |||||||| ||||||||
Sbjct: 856 ggacaggggtacgtgactacatccatgttgttgacctggctgacgg 901
>gb|CK163680.1|CK163680 FGAS016310 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1124
Score = 44.1 bits (22), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 225 tacatccatgtggttgaccttgctgacgg 253
||||||||||| |||||||| ||||||||
Sbjct: 768 tacatccatgtngttgacctggctgacgg 796
Score = 40.1 bits (20), Expect = 0.34
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 117 cccaacaatcttatgccctatgttcagcaagt 148
|||||||| || ||||||||||| ||||||||
Sbjct: 660 cccaacaacctgatgccctatgtccagcaagt 691
>gb|CK194917.1|CK194917 FGAS003350 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 889
Score = 44.1 bits (22), Expect = 0.022
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 504 gaccaatggaactgggccagcaagaacccttatggcta 541
||||| ||||||||||||| |||||||| ||||||||
Sbjct: 498 gaccagtggaactgggccaagaagaacccgtatggcta 461
>gb|BE604359.1|BE604359 WHE1405-1408_G02_G02ZS Wheat drought stressed leaf cDNA library
Triticum aestivum cDNA clone WHE1405-1408_G02_G02, mRNA
sequence
Length = 559
Score = 42.1 bits (21), Expect = 0.086
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 225 tacatccatgtggttgaccttgctgacgg 253
||||||||||| |||||||| ||||||||
Sbjct: 418 tacatccatgttgttgacctggctgacgg 446
Score = 40.1 bits (20), Expect = 0.34
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 117 cccaacaatcttatgccctatgttcagcaagt 148
|||||||| || ||||||||||| ||||||||
Sbjct: 310 cccaacaacctgatgccctatgtccagcaagt 341
>gb|BQ620368.1|BQ620368 TaLr1166H03R TaLr1 Triticum aestivum cDNA clone TaLr1166H03R, mRNA
sequence
Length = 524
Score = 42.1 bits (21), Expect = 0.086
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 225 tacatccatgtggttgaccttgctgacgg 253
||||||||||| |||||||| ||||||||
Sbjct: 309 tacatccatgttgttgacctggctgacgg 337
Score = 40.1 bits (20), Expect = 0.34
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 117 cccaacaatcttatgccctatgttcagcaagt 148
|||||||| || ||||||||||| ||||||||
Sbjct: 201 cccaacaacctgatgccctatgtccagcaagt 232
>gb|AL823053.1|AL823053 AL823053 p:133 Triticum aestivum cDNA clone E09_p133_plate_10, mRNA
sequence
Length = 381
Score = 42.1 bits (21), Expect = 0.086
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 225 tacatccatgtggttgaccttgctgacgg 253
||||||||||| |||||||| ||||||||
Sbjct: 214 tacatccatgttgttgacctggctgacgg 242
Score = 40.1 bits (20), Expect = 0.34
Identities = 74/92 (80%)
Strand = Plus / Plus
Query: 294 atagggtgtgaagcgtacaaccttggaaccggaagaggtacatctgtgctggagattgtt 353
|||||||| |||| |||||| || || || |||| || ||||| ||||||||||| |||
Sbjct: 286 atagggtgcgaagtgtacaatctgggtactggaaaggggacatccgtgctggagatggtt 345
Query: 354 aaagcatttgagaaggcttctgggaagaaaat 385
||||| |||||||||| || ||||||||
Sbjct: 346 gccgcattcgagaaggcttgcggaaagaaaat 377
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 176,891
Number of Sequences: 636343
Number of extensions: 176891
Number of successful extensions: 44695
Number of sequences better than 0.5: 59
Number of HSP's better than 0.5 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44557
Number of HSP's gapped (non-prelim): 125
length of query: 1175
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1155
effective length of database: 354,513,379
effective search space: 409462952745
effective search space used: 409462952745
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)