BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2192679.2.1
(1274 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV064931.1|CV064931 WNEL17b10 Wheat EST endosperm librar... 349 3e-094
gb|CV766574.1|CV766574 FGAS060961 Triticum aestivum FGAS: L... 339 3e-091
gb|CF134107.1|CF134107 WHE4367_G09_M17ZT Wheat meiotic flor... 329 3e-088
gb|AL818042.1|AL818042 AL818042 j:223 Triticum aestivum cDN... 295 4e-078
gb|BJ313440.1|BJ313440 BJ313440 Y. Ogihara unpublished cDNA... 291 6e-077
gb|BQ238843.1|BQ238843 TaE05040E03R TaE05 Triticum aestivum... 291 6e-077
gb|BJ281921.1|BJ281921 BJ281921 Y. Ogihara unpublished cDNA... 270 2e-070
gb|BE517961.1|BE517961 WHE0810_B05_C10ZS Wheat vernalized c... 254 1e-065
gb|CD892991.1|CD892991 G118.122I18F010726 G118 Triticum aes... 208 7e-052
gb|AJ615452.1|AJ615452 AJ615452 Triticum turgidum subsp. du... 190 2e-046
gb|CA702863.1|CA702863 wdk1c.pk006.h8 wdk1c Triticum aestiv... 174 1e-041
gb|BJ222096.1|BJ222096 BJ222096 Y. Ogihara unpublished cDNA... 161 1e-037
gb|AJ614154.1|AJ614154 AJ614154 Triticum turgidum subsp. du... 149 6e-034
gb|BJ255896.1|BJ255896 BJ255896 Y. Ogihara unpublished cDNA... 125 8e-027
gb|BJ261422.1|BJ261422 BJ261422 Y. Ogihara unpublished cDNA... 119 5e-025
gb|BJ319193.1|BJ319193 BJ319193 Y. Ogihara unpublished cDNA... 101 1e-019
gb|CD892992.1|CD892992 G118.122I18R010926 G118 Triticum aes... 96 7e-018
gb|CA700354.1|CA700354 wkm1c.pk005.k24 wkm1c Triticum aesti... 86 7e-015
gb|BJ287040.1|BJ287040 BJ287040 Y. Ogihara unpublished cDNA... 70 4e-010
gb|BQ744032.1|BQ744032 WHE4111_A01_B01ZS Wheat salt-stresse... 64 3e-008
gb|BG607633.1|BG607633 WHE2481_D07_H13ZS Triticum monococcu... 52 1e-004
gb|CD492196.1|CD492196 WHE2481_D07_H13ZT Triticum monococcu... 52 1e-004
gb|BE425724.1|BE425724 WHE0303_C01_C01ZS Wheat unstressed s... 40 0.37
gb|BI479715.1|BI479715 WHE3451_C03_E05ZS Wheat pre-anthesis... 40 0.37
gb|CA729791.1|CA729791 wip1c.pk001.d3 wip1c Triticum aestiv... 40 0.37
gb|CA730699.1|CA730699 wip1c.pk005.l16 wip1c Triticum aesti... 40 0.37
gb|CB307548.1|CB307548 HFIG533 Hessian fly infested cDNA li... 40 0.37
gb|CK207472.1|CK207472 FGAS019096 Triticum aestivum FGAS: L... 40 0.37
gb|CK208469.1|CK208469 FGAS020183 Triticum aestivum FGAS: L... 40 0.37
gb|CV774756.1|CV774756 FGAS069156 Triticum aestivum FGAS: L... 40 0.37
gb|DR736686.1|DR736686 FGAS082056 Triticum aestivum FGAS: L... 40 0.37
>gb|CV064931.1|CV064931 WNEL17b10 Wheat EST endosperm library Triticum aestivum cDNA clone
WNEL17b10 5' similar to Oryza sativa mRNA for
replication protein A2, mRNA sequence
Length = 684
Score = 349 bits (176), Expect = 3e-094
Identities = 415/494 (84%), Gaps = 3/494 (0%)
Strand = Plus / Plus
Query: 103 cttctcgccgtcgcagttcacctcctcccagaatgccgccgccgactccaccacgccttc 162
|||||||||||||||||||||| | || ||||| |||||||||||||||||| ||
Sbjct: 28 cttctcgccgtcgcagttcaccccgtcgcagaacgccgccgccgactccacc---cccaa 84
Query: 163 caagatgcgcggcgcgtccagcaccatgccgctcaccgtgaagcaggtcgtcgacgcgca 222
|||| | || |||||||| | || |||||||| || ||||||||| ||| ||||||||
Sbjct: 85 caagttccggggcgcgtcgggtacgatgccgctgacggtgaagcagatcgcggacgcgca 144
Query: 223 gcagtctggcacgggcgacaagggcgctccgttcatcgtcaatggcgtcgagatggctaa 282
|| | | ||||| ||||| |||||||| || ||| ||||| | |||||||||| ||| ||
Sbjct: 145 gctggccggcaccggcgagaagggcgcgcccttcgtcgtcgacggcgtcgagacggccaa 204
Query: 283 cattcgacttgtggggatggtcaatgccaaggtggagcggacgaccgatgtgaccttcac 342
| | | || ||||||||||| | | ||||| |||||||| || || || |||||||
Sbjct: 205 cgtcaggctcgtggggatggtgagcggcaaggcggagcggaacacggacgtctccttcac 264
Query: 343 gctcgacgatggcaccggccgcctcgatttcatcagatgggtgaatgatgcttcagattc 402
||||||||| |||||||||||| |||| |||||||||||||||||||||||| |||||||
Sbjct: 265 gctcgacgacggcaccggccgcatcgacttcatcagatgggtgaatgatgctgcagattc 324
Query: 403 ttttgaaactgctgctattcagaatggtatgtacattgcggtcattggaagcctcaaggg 462
| |||||||||||| |||||||||||||||||| |||| ||||| || |||||||||||
Sbjct: 325 tgctgaaactgctgccattcagaatggtatgtacgttgctgtcatcggtagcctcaaggg 384
Query: 463 actgcaagagaggaagcgtgctactgctttctcaatcaggcctataaccgatttcaatga 522
| | || || | ||||||||||||||||||| || |||| |||||||| |||| ||| ||
Sbjct: 385 agttcaggacaagaagcgtgctactgctttcgcagtcagacctataactgattacaacga 444
Query: 523 ggttacgctgcatttcattcagtgtgttcggatgcatatagagaacattgaattaaaggc 582
||| ||||||||||||||||||||||| ||||||||||||||||||| ||| |||||
Sbjct: 445 ggtcacgctgcatttcattcagtgtgtacggatgcatatagagaacacaaaatcaaaggt 504
Query: 583 tggcagtcctgcac 596
||||||||||||||
Sbjct: 505 tggcagtcctgcac 518
>gb|CV766574.1|CV766574 FGAS060961 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 806
Score = 339 bits (171), Expect = 3e-091
Identities = 412/492 (83%), Gaps = 3/492 (0%)
Strand = Plus / Plus
Query: 103 cttctcgccgtcgcagttcacctcctcccagaatgccgccgccgactccaccacgccttc 162
|||||||||||||||||||||| | || ||||| |||||||||||||||||| ||
Sbjct: 231 cttctcgccgtcgcagttcaccgcgtcgcagaacgccgccgccgactccacc---cccaa 287
Query: 163 caagatgcgcggcgcgtccagcaccatgccgctcaccgtgaagcaggtcgtcgacgcgca 222
|||| | || |||||||| |||| |||||||| || ||||||||| ||| |||||||
Sbjct: 288 caagttccggggcgcgtcgggcacgatgccgctgacggtgaagcagatcgcggacgcgcg 347
Query: 223 gcagtctggcacgggcgacaagggcgctccgttcatcgtcaatggcgtcgagatggctaa 282
|| | | ||||| ||||| |||||||| || ||| ||||| | |||||||||| ||| ||
Sbjct: 348 gctggccggcaccggcgagaagggcgcgcccttcgtcgtcgacggcgtcgagacggccaa 407
Query: 283 cattcgacttgtggggatggtcaatgccaaggtggagcggacgaccgatgtgaccttcac 342
| | | || ||||||||||| | | ||||| |||||||| || || || |||||||
Sbjct: 408 cgtcaggctcgtggggatggtgagcggcaaggcggagcggaacacggacgtctccttcac 467
Query: 343 gctcgacgatggcaccggccgcctcgatttcatcagatgggtgaatgatgcttcagattc 402
||||||||| |||||||||||| |||| |||||||||||||||||||||||| |||||||
Sbjct: 468 gctcgacgacggcaccggccgcatcgacttcatcagatgggtgaatgatgctgcagattc 527
Query: 403 ttttgaaactgctgctattcagaatggtatgtacattgcggtcattggaagcctcaaggg 462
| ||||||||||||||||||||||||||||||| |||| ||||| || |||||||||||
Sbjct: 528 tgctgaaactgctgctattcagaatggtatgtacgttgctgtcatcggtagcctcaaggg 587
Query: 463 actgcaagagaggaagcgtgctactgctttctcaatcaggcctataaccgatttcaatga 522
| | || || | ||||||||||||||||||| || |||| ||||| || |||| ||| ||
Sbjct: 588 agttcaggacaagaagcgtgctactgctttcgcagtcagacctatnactgattacaacga 647
Query: 523 ggttacgctgcatttcattcagtgtgttcggatgcatatagagaacattgaattaaaggc 582
||| ||||||||||||||||||||||| ||||||||| ||||||||| ||| |||||
Sbjct: 648 ggtcacgctgcatttcattcagtgtgtacggatgcatgtagagaacacaaaatcaaaggt 707
Query: 583 tggcagtcctgc 594
||||||||||||
Sbjct: 708 tggcagtcctgc 719
>gb|CF134107.1|CF134107 WHE4367_G09_M17ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4367_G09_M17, mRNA sequence
Length = 754
Score = 329 bits (166), Expect = 3e-088
Identities = 411/492 (83%), Gaps = 3/492 (0%)
Strand = Plus / Plus
Query: 103 cttctcgccgtcgcagttcacctcctcccagaatgccgccgccgactccaccacgccttc 162
|||||||||||||||||||||| | || ||||| |||||||||||||||||| ||
Sbjct: 140 cttctcgccgtcgcagttcaccgcgtcgcagaacgccgccgccgactccacc---cccaa 196
Query: 163 caagatgcgcggcgcgtccagcaccatgccgctcaccgtgaagcaggtcgtcgacgcgca 222
|||| | || |||||||| |||| |||||||| |||||||||||| ||| ||||||||
Sbjct: 197 caagttccggggcgcgtcgggcacgatgccgctgaccgtgaagcagatcgcggacgcgca 256
Query: 223 gcagtctggcacgggcgacaagggcgctccgttcatcgtcaatggcgtcgagatggctaa 282
|| | | ||||| ||||| |||||||| || ||| ||||| | ||||| |||| ||| ||
Sbjct: 257 gctggccggcaccggcgagaagggcgcgccattcgtcgtcgacggcgttgagacggccaa 316
Query: 283 cattcgacttgtggggatggtcaatgccaaggtggagcggacgaccgatgtgaccttcac 342
| | | || ||||||||||| | | ||||| || ||||| || || ||| |||||||
Sbjct: 317 cgtcaggctcgtggggatggtgagcggcaaggcggggcggaacacggacgtgtccttcac 376
Query: 343 gctcgacgatggcaccggccgcctcgatttcatcagatgggtgaatgatgcttcagattc 402
|||||||| |||||||||||| |||| ||||||||||||||||||||| || |||||||
Sbjct: 377 cctcgacgacggcaccggccgcatcgacttcatcagatgggtgaatgattctgcagattc 436
Query: 403 ttttgaaactgctgctattcagaatggtatgtacattgcggtcattggaagcctcaaggg 462
| ||||||||||||||||||||||||||||||| |||| ||||| || |||||||||||
Sbjct: 437 tgctgaaactgctgctattcagaatggtatgtacgttgctgtcatcggtagcctcaaggg 496
Query: 463 actgcaagagaggaagcgtgctactgctttctcaatcaggcctataaccgatttcaatga 522
| | || || | |||||||||||| ||||| || ||||||||||||| |||| ||| ||
Sbjct: 497 agttcaggacaagaagcgtgctacggcttttgcagtcaggcctataactgattacaacga 556
Query: 523 ggttacgctgcatttcattcagtgtgttcggatgcatatagagaacattgaattaaaggc 582
||| ||||||||||||||||||||||| |||||||| |||||||||| ||| |||||
Sbjct: 557 ggtcacgctgcatttcattcagtgtgtacggatgcacatagagaacacaaaatcaaaggt 616
Query: 583 tggcagtcctgc 594
||||||||||||
Sbjct: 617 tggcagtcctgc 628
>gb|AL818042.1|AL818042 AL818042 j:223 Triticum aestivum cDNA clone C07_j223_plate_11, mRNA
sequence
Length = 575
Score = 295 bits (149), Expect = 4e-078
Identities = 380/455 (83%), Gaps = 4/455 (0%)
Strand = Plus / Plus
Query: 103 cttctcgccgtcgcagttcacctcctcccagaatgccgccgccgactccaccacgccttc 162
|||||||||||||||||||||| | || ||||| |||||||||||||||||| ||
Sbjct: 124 cttctcgccgtcgcagttcaccccgtcgcagaacgccgccgccgactccacc---cccaa 180
Query: 163 caagatgcgcggcgcgtccagcaccatgccgctcaccgtgaagcaggtcgtcgacgcgca 222
|||| | || |||||||| | || |||||||| || ||||||||| ||| ||||||||
Sbjct: 181 caagttccggggcgcgtcgggtacgatgccgctgacggtgaagcagatcgcggacgcgca 240
Query: 223 gcagtctggcacgggcgacaagggcgctccgttcatcgtcaatggcgtcgagatggctaa 282
|| | | ||||| ||||| |||||||| || ||| ||||| | |||||||||| ||| ||
Sbjct: 241 gctggccggcaccggcgagaagggcgcgcccttcgtcgtcgacggcgtcgagacggccaa 300
Query: 283 cattcgacttgtggggatggtcaatgccaaggtggagcggacgaccgatgtgaccttcac 342
| | | || ||||||||||| | | ||||| |||||||| || || || |||||||
Sbjct: 301 cgtcaggctcgtggggatggtgagcggcaaggcggagcggaacacggacgtctccttcac 360
Query: 343 gctcgacgatggcaccggccgcctcgatttcatcagatgggtgaatgatgcttcagattc 402
||||||||| |||||||||||| |||| |||||||||||||||||||||||| |||||||
Sbjct: 361 gctcgacgacggcaccggccgcatcgacttcatcagatgggtgaatgatgctgcagattc 420
Query: 403 ttttgaaactgctgctattcagaatggtatgtacattgcggtcattggaagcctcaaggg 462
| |||||||||||| |||||||||||||||||| |||| ||||| || |||||||||||
Sbjct: 421 tgctgaaactgctgccattcagaatggtatgtacgttgctgtcatcggtagcctcaaggg 480
Query: 463 actgcaagagaggaagcgtgctactgctttctca-atcaggcctataaccgatttcaatg 521
| | || || | ||||||||||||||||||| | ||||| |||||||| |||| ||| |
Sbjct: 481 agttcaggacaagaagcgtgctactgctttcggagatcagacctataactgattacaacg 540
Query: 522 aggttacgctgcatttcattcagtgtgttcggatg 556
|||| ||||||||||||||||||||||| ||||||
Sbjct: 541 aggtcacgctgcatttcattcagtgtgtacggatg 575
>gb|BJ313440.1|BJ313440 BJ313440 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf5h08 5', mRNA sequence
Length = 551
Score = 291 bits (147), Expect = 6e-077
Identities = 404/489 (82%), Gaps = 3/489 (0%)
Strand = Plus / Plus
Query: 103 cttctcgccgtcgcagttcacctcctcccagaatgccgccgccgactccaccacgccttc 162
|||||||||||||||||||||| | || ||||| |||||||||||||||||| ||
Sbjct: 38 cttctcgccgtcgcagttcaccgcgtcgcagaacgccgccgccgactccacc---cccaa 94
Query: 163 caagatgcgcggcgcgtccagcaccatgccgctcaccgtgaagcaggtcgtcgacgcgca 222
|||| | || ||||||| | || |||||||| |||||||||||| ||| |||||||
Sbjct: 95 caagttccggggcgcgttgggaacgatgccgctgaccgtgaagcagatcgcggacgcgcg 154
Query: 223 gcagtctggcacgggcgacaagggcgctccgttcatcgtcaatggcgtcgagatggctaa 282
|| | | ||| | ||||| ||||| || || ||| ||||| | |||||||||| ||| ||
Sbjct: 155 gctggccggcgccggcgagaagggagcgcccttcgtcgtcgacggcgtcgagacggccaa 214
Query: 283 cattcgacttgtggggatggtcaatgccaaggtggagcggacgaccgatgtgaccttcac 342
| | | || ||||||||||| | | ||||| |||||||| || || || |||||||
Sbjct: 215 cgtcaggctcgtggggatggtgagcggcaaggcggagcggaacacggacgtctccttcac 274
Query: 343 gctcgacgatggcaccggccgcctcgatttcatcagatgggtgaatgatgcttcagattc 402
|||||||| |||||||||||| |||| |||||||||||||||||||||||| |||||||
Sbjct: 275 cctcgacgacggcaccggccgcatcgacttcatcagatgggtgaatgatgctgcagattc 334
Query: 403 ttttgaaactgctgctattcagaatggtatgtacattgcggtcattggaagcctcaaggg 462
| ||||||||||||||||||||||||||||||| |||| ||||| || ||||| |||||
Sbjct: 335 tgctgaaactgctgctattcagaatggtatgtacgttgctgtcatcggtagcctgaaggg 394
Query: 463 actgcaagagaggaagcgtgctactgctttctcaatcaggcctataaccgatttcaatga 522
| | || || | ||||||||||||||||||| || |||| |||||||| |||| ||| ||
Sbjct: 395 agttcaggacaagaagcgtgctactgctttcgcagtcagacctataactgattacaacga 454
Query: 523 ggttacgctgcatttcattcagtgtgttcggatgcatatagagaacattgaattaaaggc 582
||| |||||||||||||||||||| || |||||||| |||||||||| ||| |||||
Sbjct: 455 ggtcacgctgcatttcattcagtgcgtgcggatgcacatagagaacacaaaatcaaaggt 514
Query: 583 tggcagtcc 591
|||||||||
Sbjct: 515 tggcagtcc 523
>gb|BQ238843.1|BQ238843 TaE05040E03R TaE05 Triticum aestivum cDNA clone TaE05040E03R, mRNA
sequence
Length = 648
Score = 291 bits (147), Expect = 6e-077
Identities = 404/489 (82%), Gaps = 3/489 (0%)
Strand = Plus / Plus
Query: 103 cttctcgccgtcgcagttcacctcctcccagaatgccgccgccgactccaccacgccttc 162
|||||||||||||||||||||| | || ||||| |||||||||||||||||| ||
Sbjct: 93 cttctcgccgtcgcagttcaccgcgtcgcagaacgccgccgccgactccacc---cccaa 149
Query: 163 caagatgcgcggcgcgtccagcaccatgccgctcaccgtgaagcaggtcgtcgacgcgca 222
|||| | || ||||||| | || |||||||| |||||||||||| ||| |||||||
Sbjct: 150 caagttccggggcgcgttgggaacgatgccgctgaccgtgaagcagatcgcggacgcgcg 209
Query: 223 gcagtctggcacgggcgacaagggcgctccgttcatcgtcaatggcgtcgagatggctaa 282
|| | | ||| | ||||| ||||| || || ||| ||||| | |||||||||| ||| ||
Sbjct: 210 gctggccggcgccggcgagaagggagcgcccttcgtcgtcgacggcgtcgagacggccaa 269
Query: 283 cattcgacttgtggggatggtcaatgccaaggtggagcggacgaccgatgtgaccttcac 342
| | | || ||||||||||| | | ||||| |||||||| || || || |||||||
Sbjct: 270 cgtcaggctcgtggggatggtgagcggcaaggcggagcggaacacggacgtctccttcac 329
Query: 343 gctcgacgatggcaccggccgcctcgatttcatcagatgggtgaatgatgcttcagattc 402
|||||||| |||||||||||| |||| |||||||||||||||||||||||| |||||||
Sbjct: 330 cctcgacgacggcaccggccgcatcgacttcatcagatgggtgaatgatgctgcagattc 389
Query: 403 ttttgaaactgctgctattcagaatggtatgtacattgcggtcattggaagcctcaaggg 462
| ||||||||||||||||||||||||||||||| |||| ||||| || ||||| |||||
Sbjct: 390 tgctgaaactgctgctattcagaatggtatgtacgttgctgtcatcggtagcctgaaggg 449
Query: 463 actgcaagagaggaagcgtgctactgctttctcaatcaggcctataaccgatttcaatga 522
| | || || | ||||||||||||||||||| || |||| |||||||| |||| ||| ||
Sbjct: 450 agttcaggacaagaagcgtgctactgctttcgcagtcagacctataactgattacaacga 509
Query: 523 ggttacgctgcatttcattcagtgtgttcggatgcatatagagaacattgaattaaaggc 582
||| |||||||||||||||||||| || |||||||| |||||||||| ||| |||||
Sbjct: 510 ggtcacgctgcatttcattcagtgcgtgcggatgcacatagagaacacaaaatcaaaggt 569
Query: 583 tggcagtcc 591
|||||||||
Sbjct: 570 tggcagtcc 578
>gb|BJ281921.1|BJ281921 BJ281921 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr24f14 5', mRNA sequence
Length = 588
Score = 270 bits (136), Expect = 2e-070
Identities = 337/404 (83%)
Strand = Plus / Plus
Query: 188 atgccgctcaccgtgaagcaggtcgtcgacgcgcagcagtctggcacgggcgacaagggc 247
|||||||| |||||||||||| ||| ||||||| || | | ||| | ||||| |||||
Sbjct: 15 atgccgctgaccgtgaagcagatcgcggacgcgcggctggccggcgccggcgagaaggga 74
Query: 248 gctccgttcatcgtcaatggcgtcgagatggctaacattcgacttgtggggatggtcaat 307
|| || ||| ||||| | |||||||||| ||| ||| | | || ||||||||||| |
Sbjct: 75 gcgcccttcgtcgtcgacggcgtcgagacggccaacgtcaggctcgtggggatggtgagc 134
Query: 308 gccaaggtggagcggacgaccgatgtgaccttcacgctcgacgatggcaccggccgcctc 367
| ||||| |||||||| || || || ||||||| |||||||| |||||||||||| ||
Sbjct: 135 ggcaaggcggagcggaacacggacgtctccttcaccctcgacgacggcaccggccgcatc 194
Query: 368 gatttcatcagatgggtgaatgatgcttcagattcttttgaaactgctgctattcagaat 427
|| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 195 gacttcatcagatgggtgaatgatgctgcagattctgctgaaactgctgctattcagaat 254
Query: 428 ggtatgtacattgcggtcattggaagcctcaagggactgcaagagaggaagcgtgctact 487
||||||||| |||| ||||| || ||||| |||||| | || || | |||||||||||||
Sbjct: 255 ggtatgtacgttgctgtcatcggtagcctgaagggagttcaggacaagaagcgtgctact 314
Query: 488 gctttctcaatcaggcctataaccgatttcaatgaggttacgctgcatttcattcagtgt 547
|||||| || |||| |||||||| |||| ||| ||||| ||||||||||||||||||||
Sbjct: 315 gctttcgcagtcagacctataactgattacaacgaggtcacgctgcatttcattcagtgc 374
Query: 548 gttcggatgcatatagagaacattgaattaaaggctggcagtcc 591
|| |||||||| |||||||||| ||| ||||| |||||||||
Sbjct: 375 gtgcggatgcacatagagaacacaaaatcaaaggttggcagtcc 418
>gb|BE517961.1|BE517961 WHE0810_B05_C10ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0810_B05_C10, mRNA sequence
Length = 352
Score = 254 bits (128), Expect = 1e-065
Identities = 287/340 (84%)
Strand = Plus / Plus
Query: 230 ggcacgggcgacaagggcgctccgttcatcgtcaatggcgtcgagatggctaacattcga 289
||||| ||||| |||||||| || ||| ||||| | |||||||||| ||| ||| | |
Sbjct: 7 ggcaccggcgagaagggcgcgcccttcgtcgtcgacggcgtcgagacggccaacgtcagg 66
Query: 290 cttgtggggatggtcaatgccaaggtggagcggacgaccgatgtgaccttcacgctcgac 349
|| ||||||||||| | | ||||| |||||||| || || || ||||||||||||||
Sbjct: 67 ctcgtggggatggtgagcggcaaggcggagcggaacacggacgtctccttcacgctcgac 126
Query: 350 gatggcaccggccgcctcgatttcatcagatgggtgaatgatgcttcagattcttttgaa 409
|| |||||||||||| |||| |||||||||||||||||||||||| |||||||| ||||
Sbjct: 127 gacggcaccggccgcatcgacttcatcagatgggtgaatgatgctgcagattctgctgaa 186
Query: 410 actgctgctattcagaatggtatgtacattgcggtcattggaagcctcaagggactgcaa 469
|||||||| ||||||||||| ||||| | || ||||| || |||||||||||| | ||
Sbjct: 187 actgctgccattcagaatggggtgtacgtcgctgtcatcggtagcctcaagggagttcag 246
Query: 470 gagaggaagcgtgctactgctttctcaatcaggcctataaccgatttcaatgaggttacg 529
|| | |||||||||||||||||| || |||| |||||||| |||| ||| ||||| |||
Sbjct: 247 gacaagaagcgtgctactgcttttgcagtcagacctataactgattacaacgaggtcacg 306
Query: 530 ctgcatttcattcagtgtgttcggatgcatatagagaaca 569
|||||||||||||||||||| |||||||||||||||||||
Sbjct: 307 ctgcatttcattcagtgtgtacggatgcatatagagaaca 346
>gb|CD892991.1|CD892991 G118.122I18F010726 G118 Triticum aestivum cDNA clone G118122I18,
mRNA sequence
Length = 483
Score = 208 bits (105), Expect = 7e-052
Identities = 281/339 (82%), Gaps = 3/339 (0%)
Strand = Plus / Plus
Query: 103 cttctcgccgtcgcagttcacctcctcccagaatgccgccgccgactccaccacgccttc 162
|||||||||||||||||||||| | || ||||| |||||||||||||||||| ||
Sbjct: 130 cttctcgccgtcgcagttcaccgcgtcgcagaacgccgccgccgactccacc---cccaa 186
Query: 163 caagatgcgcggcgcgtccagcaccatgccgctcaccgtgaagcaggtcgtcgacgcgca 222
|||| | || |||||||| |||| |||||||| || ||||||||| ||| ||||||||
Sbjct: 187 caagttccggggcgcgtcgggcacgatgccgctgacggtgaagcagatcgcggacgcgca 246
Query: 223 gcagtctggcacgggcgacaagggcgctccgttcatcgtcaatggcgtcgagatggctaa 282
|| | | ||||| ||||| |||||||| || ||| ||||| | |||||||||| ||| ||
Sbjct: 247 gctggccggcaccggcgagaagggcgcgcccttcgtcgtcgacggcgtcgagacggccaa 306
Query: 283 cattcgacttgtggggatggtcaatgccaaggtggagcggacgaccgatgtgaccttcac 342
| | | || ||||||||||| | | ||||| |||||||| || || || |||||||
Sbjct: 307 cgtcaggctcgtggggatggtgagcggcaaggcggagcggaacacggacgtctccttcac 366
Query: 343 gctcgacgatggcaccggccgcctcgatttcatcagatgggtgaatgatgcttcagattc 402
|||||||| |||||||||||| |||| ||||||||||||||||||||| || |||||||
Sbjct: 367 cctcgacgacggcaccggccgcatcgacttcatcagatgggtgaatgattctgcagattc 426
Query: 403 ttttgaaactgctgctattcagaatggtatgtacattgc 441
| ||||||||||||||||||||||||||||||| ||||
Sbjct: 427 tgctgaaactgctgctattcagaatggtatgtacgttgc 465
>gb|AJ615452.1|AJ615452 AJ615452 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 11667R, mRNA
sequence
Length = 488
Score = 190 bits (96), Expect = 2e-046
Identities = 280/340 (82%), Gaps = 4/340 (1%)
Strand = Plus / Plus
Query: 103 cttctcgccgtcgcagttcacctcctcccagaatgccgccgccgactccaccacgccttc 162
|||||||||||||||||||||| | || ||||| |||||||||||||||||| ||
Sbjct: 143 cttctcgccgtcgcagttcaccgcgtcgcagaacgccgccgccgactccacc---cccaa 199
Query: 163 caagatgcgcggcgcgtccagcaccatgccgctcaccgtgaagcaggtcgtcgacgcgca 222
|||| | || |||||||| |||| |||||||| |||||||||||| ||| ||||||||
Sbjct: 200 caagttccggggcgcgtcgggcacgatgccgctgaccgtgaagcagatcgcggacgcgca 259
Query: 223 gcagtctggcacgggcgacaagggcgctccgttcatcgtcaatggcgtcgagatggctaa 282
|| | | ||||| ||||| |||||||| || ||| ||||| | ||||| |||| ||| ||
Sbjct: 260 gctggccggcaccggcgagaagggcgcgccattcgtcgtcgacggcgttgagacggccaa 319
Query: 283 cattcgacttgtggggatggtcaatgccaaggtggagcggacgaccgatgtgaccttcac 342
| | | || ||||||||||| | | ||||| |||||||| || || ||| ||||||
Sbjct: 320 cgtcaggctcgtggggatggtgagcggcaaggcggagcggaacacggacgtgtncttcac 379
Query: 343 gctcgacgatggcaccggcc-gcctcgatttcatcagatgggtgaatgatgcttcagatt 401
|||||||| |||||||||| || |||| ||||||||||||||||||||| || ||||||
Sbjct: 380 cctcgacgacggcaccggcccgcatcgacttcatcagatgggtgaatgattctgcagatt 439
Query: 402 cttttgaaactgctgctattcagaatggtatgtacattgc 441
|| |||||||||||||||||| |||||||||||| ||||
Sbjct: 440 ctgctgaaactgctgctattcanaatggtatgtacgttgc 479
>gb|CA702863.1|CA702863 wdk1c.pk006.h8 wdk1c Triticum aestivum cDNA clone wdk1c.pk006.h8 5'
end, mRNA sequence
Length = 522
Score = 174 bits (88), Expect = 1e-041
Identities = 273/333 (81%), Gaps = 4/333 (1%)
Strand = Plus / Plus
Query: 103 cttctcgccgtcgcagttcacctcctcccagaatgccgccgccgactccaccacgccttc 162
|||||||||||||||||||||| | || ||||| |||||||||||||||||| ||
Sbjct: 103 cttctcgccgtcgcagttcaccgcgtcgcagaacgccgccgccgactccacc---cccaa 159
Query: 163 caagatgcgcggcgcgtccagcaccatgccgctcaccgtgaagcaggtcgtcgacgcgca 222
|||| | || |||||||| |||| |||||||| || ||||||||| ||| |||||||
Sbjct: 160 caagttccggggcgcgtcgggcacgatgccgctgacggtgaagcagatcgcggacgcgcg 219
Query: 223 gcagtctggcacgggcgacaagggcgctccgttcatcgtcaatggcgtcgagatggctaa 282
|| | | ||||| ||||| |||||||| || ||| ||||| | |||||||||| ||| ||
Sbjct: 220 gctggccggcaccggcgagaagggcgcgcccttcgtcgtcgacggcgtcgagacggccaa 279
Query: 283 cattcgacttgtggggatggtcaatgccaaggtggagcggacgaccgatgtgaccttcac 342
| | | || ||||||||||| | | ||||| |||||||| || || || |||||||
Sbjct: 280 cgtcaggctcgtggggatggtgagcggcaaggcggagcggaacacggacgtctccttcac 339
Query: 343 gctcgacgatggcaccggccgcctcgatttcatcagatggg-tgaatgatgcttcagatt 401
||||||||| |||||||||||| |||| ||||||||||||| ||||||||||| ||||||
Sbjct: 340 gctcgacgacggcaccggccgcatcgacttcatcagatgggttgaatgatgctgcagatt 399
Query: 402 cttttgaaactgctgctattcagaatggtatgt 434
|| |||||||||||||| ||| ||||| ||||
Sbjct: 400 ctgctgaaactgctgctantcaaaatgggatgt 432
>gb|BJ222096.1|BJ222096 BJ222096 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl11k06 5', mRNA sequence
Length = 413
Score = 161 bits (81), Expect = 1e-037
Identities = 263/323 (81%), Gaps = 3/323 (0%)
Strand = Plus / Plus
Query: 103 cttctcgccgtcgcagttcacctcctcccagaatgccgccgccgactccaccacgccttc 162
|||||||||||||||||||||| | || ||||| |||||||||||||||||| ||
Sbjct: 94 cttctcgccgtcgcagttcaccgcgtcgcagaacgccgccgccgactccacc---cccaa 150
Query: 163 caagatgcgcggcgcgtccagcaccatgccgctcaccgtgaagcaggtcgtcgacgcgca 222
|||| | || ||||||| | || |||||||| |||||||||||| ||| |||||||
Sbjct: 151 caagttccggggcgcgttgggaacgatgccgctgaccgtgaagcagatcgcggacgcgcg 210
Query: 223 gcagtctggcacgggcgacaagggcgctccgttcatcgtcaatggcgtcgagatggctaa 282
|| | | ||| | ||||| ||||| || || ||| ||||| | |||||||||| ||| ||
Sbjct: 211 gctggccggcgccggcgagaagggagcgcccttcgtcgtcgacggcgtcgagacggccaa 270
Query: 283 cattcgacttgtggggatggtcaatgccaaggtggagcggacgaccgatgtgaccttcac 342
| | | || ||||||||||| | | ||||| |||||||| || || || |||||||
Sbjct: 271 cgtcaggctcgtggggatggtgagcggcaaggcggagcggaacacggacgtctccttcac 330
Query: 343 gctcgacgatggcaccggccgcctcgatttcatcagatgggtgaatgatgcttcagattc 402
|||||||| |||||||||||| |||| |||||||||||||||||||||||| |||||||
Sbjct: 331 cctcgacgacggcaccggccgcatcgacttcatcagatgggtgaatgatgctgcagattc 390
Query: 403 ttttgaaactgctgctattcaga 425
| ||||||||||||||||||||
Sbjct: 391 tgctgaaactgctgctattcaga 413
>gb|AJ614154.1|AJ614154 AJ614154 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 09820R, mRNA
sequence
Length = 534
Score = 149 bits (75), Expect = 6e-034
Identities = 276/338 (81%), Gaps = 7/338 (2%)
Strand = Plus / Plus
Query: 103 cttctcgccgtcgcagttcacctcctcccagaatgccgccgccgactccaccacgccttc 162
|||||||||||||||||||||| | || ||||| |||||||||||||||||| ||
Sbjct: 143 cttctcgccgtcgcagttcaccgcgtcgcagaacgccgccgccgactccacc---cccaa 199
Query: 163 caagatgcgcggcgcgtccag-caccatgccgctcaccgtgaagcaggtcgtcgacgcgc 221
|||| | || |||||||| | ||| |||||||| |||||||||||| ||| |||||||
Sbjct: 200 caagttccggggcgcgtctgggcacgatgccgctgaccgtgaagcagatcgcggacgcgc 259
Query: 222 agcagtctggcacgggc-gacaagggcgctccgttcatcgtcaatggcgtcgagatggct 280
||| | | || || ||| || |||||||| || ||| ||||| | ||||| |||| |||
Sbjct: 260 agctggccggnaccggctgagaagggcgcgccattcgtcgtcgacggcgttgagacggcc 319
Query: 281 aacattcgacttgtggggatggtcaa-tgccaaggtggagcggacgaccgatgtgacctt 339
||| | | || ||||||||||| | | ||||| |||||||| || || ||| ||||
Sbjct: 320 aacgtcaggctcgtggggatggtgagcnggcaaggcggagcggaacacggacgtgtcctt 379
Query: 340 cacgctcgacgatggcaccggccgcctcgatttcatcagatgggtgaatgatgcttcaga 399
|| |||||||| |||||||||||| |||| ||||||||||||||||||||| || ||||
Sbjct: 380 naccctcgacgacggcaccggccgcatcgacttcatcagatgggtgaatgattctgcaga 439
Query: 400 ttcttttgaaactgctgctattcag-aatggtatgtac 436
|||| ||||||||||||||||||| ||||||||||||
Sbjct: 440 ttctgctgaaactgctgctattcagcaatggtatgtac 477
>gb|BJ255896.1|BJ255896 BJ255896 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh2n23 5', mRNA sequence
Length = 621
Score = 125 bits (63), Expect = 8e-027
Identities = 123/143 (86%)
Strand = Plus / Plus
Query: 452 agcctcaagggactgcaagagaggaagcgtgctactgctttctcaatcaggcctataacc 511
|||||||||||| | || || | |||||||||||| ||||| || |||||||||||||
Sbjct: 3 agcctcaagggagttcaggacaagaagcgtgctacggcttttgcagtcaggcctataact 62
Query: 512 gatttcaatgaggttacgctgcatttcattcagtgtgttcggatgcatatagagaacatt 571
|||| ||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 63 gattacaacgaggtcacgctgcatttcattcagtgtgtacggatgcacatagagaacaca 122
Query: 572 gaattaaaggctggcagtcctgc 594
||| ||||| ||||||||||||
Sbjct: 123 aaatcaaaggttggcagtcctgc 145
>gb|BJ261422.1|BJ261422 BJ261422 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh2n23 3', mRNA sequence
Length = 681
Score = 119 bits (60), Expect = 5e-025
Identities = 105/120 (87%)
Strand = Plus / Minus
Query: 475 gaagcgtgctactgctttctcaatcaggcctataaccgatttcaatgaggttacgctgca 534
|||||||||||| ||||| || ||||||||||||| |||| ||| ||||| ||||||||
Sbjct: 669 gaagcgtgctacggcttttgcagtcaggcctataactgattacaacgaggtcacgctgca 610
Query: 535 tttcattcagtgtgttcggatgcatatagagaacattgaattaaaggctggcagtcctgc 594
||||||||||||||| |||||||| |||||||||| ||| ||||| ||||||||||||
Sbjct: 609 tttcattcagtgtgtacggatgcacatagagaacacaaaatcaaaggttggcagtcctgc 550
>gb|BJ319193.1|BJ319193 BJ319193 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf5h08 3', mRNA sequence
Length = 657
Score = 101 bits (51), Expect = 1e-019
Identities = 96/111 (86%)
Strand = Plus / Minus
Query: 481 tgctactgctttctcaatcaggcctataaccgatttcaatgaggttacgctgcatttcat 540
||||||||||||| || |||| |||||||| |||| ||| ||||| ||||||||||||||
Sbjct: 657 tgctactgctttcgcagtcagacctataactgattacaacgaggtcacgctgcatttcat 598
Query: 541 tcagtgtgttcggatgcatatagagaacattgaattaaaggctggcagtcc 591
|||||| || |||||||| |||||||||| ||| ||||| |||||||||
Sbjct: 597 tcagtgcgtgcggatgcacatagagaacacaaaatcaaaggttggcagtcc 547
>gb|CD892992.1|CD892992 G118.122I18R010926 G118 Triticum aestivum cDNA clone G118122I18,
mRNA sequence
Length = 699
Score = 95.6 bits (48), Expect = 7e-018
Identities = 102/120 (85%)
Strand = Plus / Minus
Query: 475 gaagcgtgctactgctttctcaatcaggcctataaccgatttcaatgaggttacgctgca 534
|||||||||||| ||||| || ||||||||||||| |||| | | ||||| |||||||
Sbjct: 695 gaagcgtgctacggcttttgcagtcaggcctataactgattaccacgaggtcccgctgca 636
Query: 535 tttcattcagtgtgttcggatgcatatagagaacattgaattaaaggctggcagtcctgc 594
||||||||||||||| |||||||| ||||||||| ||| ||||| ||||||||||||
Sbjct: 635 tttcattcagtgtgtacggatgcacatagagaacccaaaatcaaaggttggcagtcctgc 576
>gb|CA700354.1|CA700354 wkm1c.pk005.k24 wkm1c Triticum aestivum cDNA clone wkm1c.pk005.k24
5' end, mRNA sequence
Length = 526
Score = 85.7 bits (43), Expect = 7e-015
Identities = 127/158 (80%)
Strand = Plus / Plus
Query: 336 ccttcacgctcgacgatggcaccggccgcctcgatttcatcagatgggtgaatgatgctt 395
|||||| ||||||||| || | ||| ||| |||| ||||||||||||||||||||||||
Sbjct: 363 ccttcaagctcgacgaaggnaacgggcgcatcgacttcatcagatgggtgaatgatgctg 422
Query: 396 cagattcttttgaaactgctgctattcagaatggtatgtacattgcggtcattggaagcc 455
|| ||||| |||||||| || | ||| |||||||||| | |||| ||||| || | ||
Sbjct: 423 canattctgctgaaactggtggcaatcanaatggtatgtncgttgctgtcatcggtancc 482
Query: 456 tcaagggactgcaagagaggaagcgtgctactgctttc 493
|| ||||| | || | | || |||||||||||||||
Sbjct: 483 tcnagggaattcanggcaanaancgtgctactgctttc 520
Score = 75.8 bits (38), Expect = 7e-012
Identities = 130/160 (81%), Gaps = 3/160 (1%)
Strand = Plus / Plus
Query: 103 cttctcgccgtcgcagttcacctcctcccagaatgccgccgccgactccaccacgccttc 162
|||||||||||||||||||||| | || ||||| |||||||||||||||||| ||
Sbjct: 132 cttctcgccgtcgcagttcaccccgtcgcagaacgccgccgccgactccacc---cccaa 188
Query: 163 caagatgcgcggcgcgtccagcaccatgccgctcaccgtgaagcaggtcgtcgacgcgca 222
|||| | || |||||||| | || |||||||| || ||||||||| ||| ||||||||
Sbjct: 189 caagttccggggcgcgtcgggtacgatgccgctgacggtgaagcagatcgcggacgcgca 248
Query: 223 gcagtctggcacgggcgacaagggcgctccgttcatcgtc 262
|| | | ||||| ||||| |||||||| || ||| |||||
Sbjct: 249 gctggccggcaccggcgagaagggcgcgcccttcgtcgtc 288
>gb|BJ287040.1|BJ287040 BJ287040 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr24f14 3', mRNA sequence
Length = 624
Score = 69.9 bits (35), Expect = 4e-010
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 521 gaggttacgctgcatttcattcagtgtgttcggatgcatatagagaacattgaattaaag 580
||||| |||||||||||||||||||| || |||||||| |||||||||| ||| ||||
Sbjct: 616 gaggtcacgctgcatttcattcagtgcgtgcggatgcacatagagaacacaaaatcaaag 557
Query: 581 gctggcagtcc 591
| |||||||||
Sbjct: 556 gttggcagtcc 546
>gb|BQ744032.1|BQ744032 WHE4111_A01_B01ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4111_A01_B01, mRNA sequence
Length = 699
Score = 63.9 bits (32), Expect = 3e-008
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 290 cttgtggggatggtcaatgccaaggtggagcggacgaccgatgtgaccttcacgctcgac 349
||||||||||| |||| | ||||| ||||||| || || ||| ||||||||||||||
Sbjct: 23 cttgtggggattgtcagcggcaaggcagagcggaacacggacgtgtccttcacgctcgac 82
Query: 350 gatggcaccggccgcctcgatttcatcagatg 381
|| ||||||||||| |||| |||||||||||
Sbjct: 83 gacggcaccggccgtatcgacttcatcagatg 114
>gb|BG607633.1|BG607633 WHE2481_D07_H13ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2481_D07_H13,
mRNA sequence
Length = 558
Score = 52.0 bits (26), Expect = 1e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 336 ccttcacgctcgacgatggcaccggccgcctcgatttcatcagatg 381
|||||||||||||| | ||||||| || | ||||||||||||||||
Sbjct: 408 ccttcacgctcgaccacggcaccgacctcatcgatttcatcagatg 453
>gb|CD492196.1|CD492196 WHE2481_D07_H13ZT Triticum monococcum DV92 early reproductive apex
cDNA library Triticum monococcum cDNA clone
WHE2481_D07_H13, mRNA sequence
Length = 621
Score = 52.0 bits (26), Expect = 1e-004
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 336 ccttcacgctcgacgatggcaccggccgcctcgatttcatcagatg 381
|||||||||||||| | ||||||| || | ||||||||||||||||
Sbjct: 292 ccttcacgctcgaccacggcaccgacctcatcgatttcatcagatg 247
>gb|BE425724.1|BE425724 WHE0303_C01_C01ZS Wheat unstressed seedling shoot cDNA library
Triticum aestivum cDNA clone WHE0303_C01_C01, mRNA
sequence
Length = 177
Score = 40.1 bits (20), Expect = 0.37
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 171 gcggcgcgtccagcaccatg 190
||||||||||||||||||||
Sbjct: 93 gcggcgcgtccagcaccatg 74
>gb|BI479715.1|BI479715 WHE3451_C03_E05ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE3451_C03_E05, mRNA sequence
Length = 595
Score = 40.1 bits (20), Expect = 0.37
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 171 gcggcgcgtccagcaccatg 190
||||||||||||||||||||
Sbjct: 128 gcggcgcgtccagcaccatg 109
>gb|CA729791.1|CA729791 wip1c.pk001.d3 wip1c Triticum aestivum cDNA clone wip1c.pk001.d3 5'
end, mRNA sequence
Length = 571
Score = 40.1 bits (20), Expect = 0.37
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 171 gcggcgcgtccagcaccatg 190
||||||||||||||||||||
Sbjct: 177 gcggcgcgtccagcaccatg 158
>gb|CA730699.1|CA730699 wip1c.pk005.l16 wip1c Triticum aestivum cDNA clone wip1c.pk005.l16
5' end, mRNA sequence
Length = 631
Score = 40.1 bits (20), Expect = 0.37
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 171 gcggcgcgtccagcaccatg 190
||||||||||||||||||||
Sbjct: 152 gcggcgcgtccagcaccatg 133
>gb|CB307548.1|CB307548 HFIG533 Hessian fly infested cDNA library Triticum aestivum cDNA,
mRNA sequence
Length = 676
Score = 40.1 bits (20), Expect = 0.37
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 171 gcggcgcgtccagcaccatg 190
||||||||||||||||||||
Sbjct: 139 gcggcgcgtccagcaccatg 120
>gb|CK207472.1|CK207472 FGAS019096 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1119
Score = 40.1 bits (20), Expect = 0.37
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 325 gaccgatgtgaccttcacgctcgacgatggcaccgg 360
|||||| ||| | |||||||||||||| ||||||||
Sbjct: 392 gaccgacgtgtcgttcacgctcgacgacggcaccgg 427
>gb|CK208469.1|CK208469 FGAS020183 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1148
Score = 40.1 bits (20), Expect = 0.37
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 345 tcgacgatggcaccggccgcctcg 368
||||||| ||||||||||||||||
Sbjct: 365 tcgacgagggcaccggccgcctcg 388
>gb|CV774756.1|CV774756 FGAS069156 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 841
Score = 40.1 bits (20), Expect = 0.37
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 345 tcgacgatggcaccggccgcctcg 368
||||||| ||||||||||||||||
Sbjct: 461 tcgacgagggcaccggccgcctcg 484
>gb|DR736686.1|DR736686 FGAS082056 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1110
Score = 40.1 bits (20), Expect = 0.37
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 345 tcgacgatggcaccggccgcctcg 368
||||||| ||||||||||||||||
Sbjct: 361 tcgacgagggcaccggccgcctcg 384
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 258,243
Number of Sequences: 636343
Number of extensions: 258243
Number of successful extensions: 71901
Number of sequences better than 0.5: 32
Number of HSP's better than 0.5 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71825
Number of HSP's gapped (non-prelim): 54
length of query: 1274
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1254
effective length of database: 354,513,379
effective search space: 444559777266
effective search space used: 444559777266
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)