BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161285.2.2
(798 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA742813.1|CA742813 wri1s.pk004.l13 wri1s Triticum aesti... 143 2e-032
gb|CD871721.1|CD871721 AZO2.118O11F010207 AZO2 Triticum aes... 143 2e-032
gb|CD871499.1|CD871499 AZO2.118G02R010404 AZO2 Triticum aes... 137 1e-030
gb|BQ801781.1|BQ801781 WHE2818_E02_I04ZS Triticum monococcu... 135 5e-030
gb|BE442932.1|BE442932 WHE1108_C12_F24ZS Wheat etiolated se... 133 2e-029
gb|CA746671.1|CA746671 wri2s.pk004.b19 wri2s Triticum aesti... 133 2e-029
gb|CV768950.1|CV768950 FGAS063341 Triticum aestivum FGAS: L... 133 2e-029
gb|CN011355.1|CN011355 WHE3883_B06_C11ZS Wheat Fusarium gra... 129 3e-028
gb|CA602303.1|CA602303 wr1.pk0017.a11 wr1 Triticum aestivum... 127 1e-027
gb|CD906334.1|CD906334 G468.104J01R010928 G468 Triticum aes... 127 1e-027
gb|BG608382.1|BG608382 WHE2498_F12_L24ZS Triticum monococcu... 117 1e-024
gb|CK217709.1|CK217709 FGAS029711 Triticum aestivum FGAS: L... 113 2e-023
gb|BF201396.1|BF201396 WHE1770_B09_D18ZS Wheat pre-anthesis... 107 1e-021
gb|CD871498.1|CD871498 AZO2.118G02F010207 AZO2 Triticum aes... 107 1e-021
gb|CK196253.1|CK196253 FGAS004703 Triticum aestivum FGAS: L... 105 5e-021
gb|CK199568.1|CK199568 FGAS008071 Triticum aestivum FGAS: L... 105 5e-021
gb|CK193532.1|CK193532 FGAS001946 Triticum aestivum FGAS: L... 103 2e-020
gb|CA738363.1|CA738363 wpi2s.pk006.i20 wpi2s Triticum aesti... 100 3e-019
gb|BJ232318.1|BJ232318 BJ232318 Y. Ogihara unpublished cDNA... 96 4e-018
gb|BJ237971.1|BJ237971 BJ237971 Y. Ogihara unpublished cDNA... 96 4e-018
gb|BJ298062.1|BJ298062 BJ298062 Y. Ogihara unpublished cDNA... 96 4e-018
gb|AL820751.1|AL820751 AL820751 O:232 Triticum aestivum cDN... 96 4e-018
gb|CD872145.1|CD872145 AZO2.119O23R010403 AZO2 Triticum aes... 96 4e-018
gb|CD902077.1|CD902077 G356.105N09R011023 G356 Triticum aes... 96 4e-018
gb|CD914064.1|CD914064 G550.120H10R010920 G550 Triticum aes... 96 4e-018
gb|CD920305.1|CD920305 G608.116J13F010912 G608 Triticum aes... 96 4e-018
gb|CK205807.1|CK205807 FGAS017352 Triticum aestivum FGAS: L... 96 4e-018
gb|CK208940.1|CK208940 FGAS020666 Triticum aestivum FGAS: L... 96 4e-018
gb|CA601651.1|CA601651 wr1.pk0002.c10 wr1 Triticum aestivum... 94 2e-017
gb|CA737355.1|CA737355 wpi2s.pk001.d3 wpi2s Triticum aestiv... 94 2e-017
gb|BE442831.1|BE442831 WHE1107_H01_P01ZS Wheat etiolated se... 92 7e-017
gb|BE444633.1|BE444633 WHE1126_H06_O12ZS Wheat etiolated se... 92 7e-017
gb|BE446752.1|BE446752 WHE1140_G07_N14ZS Wheat etiolated se... 92 7e-017
gb|BE591139.1|BE591139 WHE1655-1658_E05_E05ZS Wheat heat st... 92 7e-017
gb|AJ612294.1|AJ612294 AJ612294 Triticum turgidum subsp. du... 92 7e-017
gb|CV775974.1|CV775974 FGAS070378 Triticum aestivum FGAS: L... 92 7e-017
gb|CV780543.1|CV780543 FGAS074954 Triticum aestivum FGAS: L... 92 7e-017
gb|BJ291441.1|BJ291441 BJ291441 Y. Ogihara unpublished cDNA... 86 4e-015
gb|AL820470.1|AL820470 AL820470 O:232 Triticum aestivum cDN... 86 4e-015
gb|CA720919.1|CA720919 wkm2n.pk008.f20 wkm2n Triticum aesti... 86 4e-015
gb|CD914063.1|CD914063 G550.120H10F010712 G550 Triticum aes... 86 4e-015
gb|CD924196.1|CD924196 G750.111P07F010705 G750 Triticum aes... 86 4e-015
gb|CD926166.1|CD926166 G750.120I12F010711 G750 Triticum aes... 86 4e-015
gb|CK193861.1|CK193861 FGAS002280 Triticum aestivum FGAS: L... 86 4e-015
gb|BJ250168.1|BJ250168 BJ250168 Y. Ogihara unpublished cDNA... 84 2e-014
gb|CD891647.1|CD891647 G118.118A02F010724 G118 Triticum aes... 84 2e-014
gb|CD891670.1|CD891670 G118.118B01F010724 G118 Triticum aes... 84 2e-014
gb|CK207331.1|CK207331 FGAS018951 Triticum aestivum FGAS: L... 82 7e-014
gb|BJ275014.1|BJ275014 BJ275014 Y. Ogihara unpublished cDNA... 80 3e-013
gb|BJ275300.1|BJ275300 BJ275300 Y. Ogihara unpublished cDNA... 80 3e-013
gb|CA644915.1|CA644915 wre1n.pk0085.g5 wre1n Triticum aesti... 80 3e-013
gb|CA661517.1|CA661517 wlmk1.pk0003.h10 wlmk1 Triticum aest... 80 3e-013
gb|CA701409.1|CA701409 wkm2c.pk005.n4 wkm2c Triticum aestiv... 80 3e-013
gb|CA712997.1|CA712997 wdk3c.pk016.k3 wdk3c Triticum aestiv... 80 3e-013
gb|CA701420.1|CA701420 wkm2c.pk006.e5 wkm2c Triticum aestiv... 74 2e-011
gb|CK162495.1|CK162495 FGAS015090 Triticum aestivum FGAS: L... 74 2e-011
gb|CD922618.1|CD922618 G750.104B20F010529 G750 Triticum aes... 60 2e-007
gb|CK163240.1|CK163240 FGAS015861 Triticum aestivum FGAS: L... 60 2e-007
gb|CA722575.1|CA722575 wds1c.pk002.h24.f wds1c Triticum mon... 58 1e-006
gb|CK202349.1|CK202349 FGAS010873 Triticum aestivum FGAS: L... 54 2e-005
gb|CV762910.1|CV762910 FGAS057299 Triticum aestivum FGAS: L... 54 2e-005
gb|BE446775.1|BE446775 WHE1140_E07_J14ZS Wheat etiolated se... 52 6e-005
gb|BF473320.1|BF473320 WHE0923_B05_D09ZS Wheat 5-15 DAP spi... 44 0.015
gb|CA720757.1|CA720757 wkm2n.pk008.g12 wkm2n Triticum aesti... 44 0.015
>gb|CA742813.1|CA742813 wri1s.pk004.l13 wri1s Triticum aestivum cDNA clone wri1s.pk004.l13
5' end, mRNA sequence
Length = 588
Score = 143 bits (72), Expect = 2e-032
Identities = 276/344 (80%)
Strand = Plus / Minus
Query: 142 atcagttcccggtactcgagttcgctggccgcgtctgcgatcacgtggcaggatgcagag 201
||||||||| | ||||| |||| || || || ||||| ||||| ||||||||| | |
Sbjct: 483 atcagttccagctactctggttctctagcagcatctgccatcacctggcaggattccagg 424
Query: 202 aatagcttcctgagagtgaaggtcgtgaacttcgggtcggacaccgttaacctcacggtc 261
||||||||||||| ||| ||| | ||||||||||||||||||||||| | ||||||| ||
Sbjct: 423 aatagcttcctgaaagtaaagattgtgaacttcgggtcggacaccgtgagcctcacgatc 364
Query: 262 tccacgagcggactcggggccagcgtcaacgcgctgggatcaaccgccaccgtcctcacg 321
|| | ||| || ||| ||| ||||||||||||| |||| ||| || || ||||||
Sbjct: 363 tctgtgtccgggcttcaggctagcatcaacgcgctggggtcaaacgctactgttctcacg 304
Query: 322 tctggcaacgtcatggacgagaactccttcagtaacccgaacaaggttgcgccggtgaaa 381
|| |||| || | ||| || || || |||||||||||||||||||| | ||| |||| |
Sbjct: 303 tccagcaatgtgaaggatgaaaattctttcagtaacccgaacaaggtcgtgcccgtgaca 244
Query: 382 agccagctgagcaacgccgcggagcagatgcaggtcacgctggctcctcactccttcacc 441
||||||||| ||||| ||||| ||||||||||||||||| ||| | ||||||||| ||
Sbjct: 243 agccagctgcaaaacgcagcggaacagatgcaggtcacgctcgctgcgcactccttctcc 184
Query: 442 gccttcgatctggcgctggctgagcccaagcttgtggcggagat 485
| ||||| || ||||| ||| || || ||||||| ||||||||
Sbjct: 183 tcgttcgaccttgcgcttgctcagtccgagcttgttgcggagat 140
Score = 40.1 bits (20), Expect = 0.23
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 37 ccggacgctattgtcttcaactcctggc 64
||||| ||||| ||||||||||||||||
Sbjct: 588 ccggatgctatcgtcttcaactcctggc 561
>gb|CD871721.1|CD871721 AZO2.118O11F010207 AZO2 Triticum aestivum cDNA clone AZO2118O11,
mRNA sequence
Length = 687
Score = 143 bits (72), Expect = 2e-032
Identities = 276/344 (80%)
Strand = Plus / Plus
Query: 142 atcagttcccggtactcgagttcgctggccgcgtctgcgatcacgtggcaggatgcagag 201
||||||||| | ||||| |||| || || || ||||| ||||| ||||||||| | |
Sbjct: 116 atcagttccagctactctggttctctagcagcatctgccatcacctggcaggattccagg 175
Query: 202 aatagcttcctgagagtgaaggtcgtgaacttcgggtcggacaccgttaacctcacggtc 261
||||||||||||| ||| ||| | ||||||||||||||||||||||| | ||||||| ||
Sbjct: 176 aatagcttcctgaaagtaaagattgtgaacttcgggtcggacaccgtgagcctcacgatc 235
Query: 262 tccacgagcggactcggggccagcgtcaacgcgctgggatcaaccgccaccgtcctcacg 321
|| | ||| || ||| ||| ||||||||||||| |||| ||| || || ||||||
Sbjct: 236 tctgtgtccgggcttcaggctagcatcaacgcgctggggtcaaacgctactgttctcacg 295
Query: 322 tctggcaacgtcatggacgagaactccttcagtaacccgaacaaggttgcgccggtgaaa 381
|| |||| || | ||| || || || |||||||||||||||||||| | ||| |||| |
Sbjct: 296 tccagcaatgtgaaggatgaaaattctttcagtaacccgaacaaggtcgtgcccgtgaca 355
Query: 382 agccagctgagcaacgccgcggagcagatgcaggtcacgctggctcctcactccttcacc 441
||||||||| ||||| ||||| ||||||||||||||||| ||| | ||||||||| ||
Sbjct: 356 agccagctgcaaaacgcagcggaacagatgcaggtcacgctcgctgcgcactccttctcc 415
Query: 442 gccttcgatctggcgctggctgagcccaagcttgtggcggagat 485
| ||||| || ||||| ||| || || ||||||| ||||||||
Sbjct: 416 tcgttcgaccttgcgcttgctcagtccgagcttgttgcggagat 459
Score = 81.8 bits (41), Expect = 7e-014
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 30 gtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactg 89
|||||| ||||| ||||| |||||||||||||||||||| || || |||||||| |||||
Sbjct: 4 gtggaatccggatgctatcgtcttcaactcctggcaacaatacggaactcctagttactg 63
Query: 90 gatgcaga 97
||||||||
Sbjct: 64 gatgcaga 71
>gb|CD871499.1|CD871499 AZO2.118G02R010404 AZO2 Triticum aestivum cDNA clone AZO2118G02,
mRNA sequence
Length = 562
Score = 137 bits (69), Expect = 1e-030
Identities = 231/285 (81%)
Strand = Plus / Minus
Query: 201 gaatagcttcctgagagtgaaggtcgtgaacttcgggtcggacaccgttaacctcacggt 260
|||||||||||||| ||| ||| | ||||||||||||||||||||||| | ||||||| |
Sbjct: 476 gaatagcttcctgaaagtaaagattgtgaacttcgggtcggacaccgtgagcctcacgat 417
Query: 261 ctccacgagcggactcggggccagcgtcaacgcgctgggatcaaccgccaccgtcctcac 320
||| | ||| || ||| ||| ||||||||||||| |||| ||| || || |||||
Sbjct: 416 ctctgtgtccgggcttcaggctagcatcaacgcgctggggtcaaacgctactgttctcac 357
Query: 321 gtctggcaacgtcatggacgagaactccttcagtaacccgaacaaggttgcgccggtgaa 380
||| |||| || | ||| || || || |||||||||||||||||||| | ||| ||||
Sbjct: 356 gtccagcaatgtgaaggatgaaaattctttcagtaacccgaacaaggtcgtgcccgtgac 297
Query: 381 aagccagctgagcaacgccgcggagcagatgcaggtcacgctggctcctcactccttcac 440
|||||||||| ||||| ||||| ||||||||||||||||| ||| | ||||||||| |
Sbjct: 296 aagccagctgcaaaacgcagcggaacagatgcaggtcacgctcgctgcgcactccttctc 237
Query: 441 cgccttcgatctggcgctggctgagcccaagcttgtggcggagat 485
| | ||||| || ||||| ||| || || ||||||| ||||||||
Sbjct: 236 ctcgttcgaccttgcgcttgctcagtccgagcttgttgcggagat 192
>gb|BQ801781.1|BQ801781 WHE2818_E02_I04ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2818_E02_I04, mRNA
sequence
Length = 775
Score = 135 bits (68), Expect = 5e-030
Identities = 275/344 (79%)
Strand = Plus / Minus
Query: 142 atcagttcccggtactcgagttcgctggccgcgtctgcgatcacgtggcaggatgcagag 201
||||||||| | ||||| |||| || || || ||||| ||||| ||||||||| | |
Sbjct: 534 atcagttccagctactctggttctctagcagcatctgccatcacctggcaggattccagg 475
Query: 202 aatagcttcctgagagtgaaggtcgtgaacttcgggtcggacaccgttaacctcacggtc 261
||||||||||||| ||| ||| | ||||||||||||||||||||||| | ||||||| ||
Sbjct: 474 aatagcttcctgaaagtaaagattgtgaacttcgggtcggacaccgtgagcctcacgatc 415
Query: 262 tccacgagcggactcggggccagcgtcaacgcgctgggatcaaccgccaccgtcctcacg 321
|| | ||| || ||| ||| ||||||||||||| |||| ||| || || ||||||
Sbjct: 414 tctgtgtccgggcttcaggctagcatcaacgcgctggggtcaaacgctactgttctcacg 355
Query: 322 tctggcaacgtcatggacgagaactccttcagtaacccgaacaaggttgcgccggtgaaa 381
|| |||| || | ||| || || || |||||||||||||||||||| | ||| |||| |
Sbjct: 354 tccagcaatgtgaaggatgaaaattctttcagtaacccgaacaaggtcgtgcccgtgaca 295
Query: 382 agccagctgagcaacgccgcggagcagatgcaggtcacgctggctcctcactccttcacc 441
||||||||| ||||| ||||| |||||||||||||| || ||| | ||||||||| ||
Sbjct: 294 agccagctgcaaaacgcagcggaacagatgcaggtcacactcgctgcgcactccttctcc 235
Query: 442 gccttcgatctggcgctggctgagcccaagcttgtggcggagat 485
| ||||| || ||||| ||| || || ||||||| ||||||||
Sbjct: 234 tcgttcgaccttgcgcttgctcagtccgagcttgtcgcggagat 191
Score = 107 bits (54), Expect = 1e-021
Identities = 86/97 (88%)
Strand = Plus / Minus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
|||||||| || | ||||||||| ||||||||||| ||||| ||||| ||||||||||||
Sbjct: 675 ccactctttgtaaacgacaatgatcaaacgtggaatccggatgctatcgtcttcaactcc 616
Query: 61 tggcaacactatggnactcctagctactggatgcaga 97
|||||||| || || |||||||| |||||||||||||
Sbjct: 615 tggcaacaatacggaactcctagttactggatgcaga 579
>gb|BE442932.1|BE442932 WHE1108_C12_F24ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1108_C12_F24,
mRNA sequence
Length = 509
Score = 133 bits (67), Expect = 2e-029
Identities = 166/199 (83%)
Strand = Plus / Plus
Query: 287 tcaacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaact 346
||||||||||||| |||| ||| || || |||||||| |||| || | ||| || || |
Sbjct: 244 tcaacgcgctggggtcaaacgctactgttctcacgtccagcaatgtgaaggatgaaaatt 303
Query: 347 ccttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagc 406
| |||||||||||||||||||| | ||| |||| |||||||||| ||||||||||||| |
Sbjct: 304 ctttcagtaacccgaacaaggtcgtgcctgtgacaagccagctgcgcaacgccgcggaac 363
Query: 407 agatgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgctggctgagc 466
|||||||||||||||| ||| | ||||||||| || | ||||| || ||||| ||| ||
Sbjct: 364 agatgcaggtcacgctcgctgcccactccttctcctcgttcgaccttgcgcttgctcagt 423
Query: 467 ccaagcttgtggcggagat 485
|| ||||||| ||||||||
Sbjct: 424 ccgagcttgtcgcggagat 442
Score = 69.9 bits (35), Expect = 3e-010
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 44 ctattgtcttcaactcctggcaacactatggnactcctagctactggatgcaga 97
|||| |||||||||||||||||||| || || |||||||| |||||||||||||
Sbjct: 1 ctatcgtcttcaactcctggcaacaatacggaactcctagttactggatgcaga 54
Score = 67.9 bits (34), Expect = 1e-009
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 142 atcagttcccggtactcgagttcgctggccgcgtctgcgatcacgtggcaggatgcagag 201
||||||||| | ||||| |||| || || || ||||| ||||| ||||||||| | | |
Sbjct: 99 atcagttccagctactctggttctctagcagcatctgctatcacctggcaggattccggg 158
Query: 202 aatagcttcctgagagtgaaggtcgtgaacttcgggtcggacaccgttaacctcacggtc 261
|| |||||||||| ||| ||| | |||||||||||| |||||||||| | ||||||| ||
Sbjct: 159 aacagcttcctgaaagtaaagattgtgaacttcgggccggacaccgtgagcctcacgatc 218
Query: 262 tc 263
||
Sbjct: 219 tc 220
>gb|CA746671.1|CA746671 wri2s.pk004.b19 wri2s Triticum aestivum cDNA clone wri2s.pk004.b19
5' end, mRNA sequence
Length = 530
Score = 133 bits (67), Expect = 2e-029
Identities = 166/199 (83%)
Strand = Plus / Plus
Query: 287 tcaacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaact 346
||||||||||||| |||| ||| || || |||||||| |||| || | ||| || || |
Sbjct: 192 tcaacgcgctggggtcaaacgctactgttctcacgtccagcaatgtgaaggatgaaaatt 251
Query: 347 ccttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagc 406
| |||||||||||||||||||| | ||| |||| |||||||||| ||||||||||||| |
Sbjct: 252 ctttcagtaacccgaacaaggtcgtgcctgtgacaagccagctgcgcaacgccgcggaac 311
Query: 407 agatgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgctggctgagc 466
|||||||||||||||| ||| | ||||||||| || | ||||| || ||||| ||| ||
Sbjct: 312 agatgcaggtcacgctcgctgcccactccttctcctcgttcgaccttgcgcttgctcagt 371
Query: 467 ccaagcttgtggcggagat 485
|| ||||||| ||||||||
Sbjct: 372 ccgagcttgtcgcggagat 390
Score = 65.9 bits (33), Expect = 4e-009
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 175 tctgcgatcacgtggcaggatgcagagaatagcttcctgagagtgaaggtcgtgaacttc 234
||||| ||||| ||||||||| | | ||| |||||||||| ||| ||| | |||||||||
Sbjct: 80 tctgctatcacctggcaggattccgggaacagcttcctgaaagtaaagattgtgaacttc 139
Query: 235 gggtcggacaccgttaacctcacggtctc 263
||| |||||||||| | ||||||| ||||
Sbjct: 140 gggccggacaccgtgagcctcacgatctc 168
>gb|CV768950.1|CV768950 FGAS063341 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 805
Score = 133 bits (67), Expect = 2e-029
Identities = 166/199 (83%)
Strand = Plus / Plus
Query: 287 tcaacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaact 346
||||||||||||| |||| ||| || || |||||||| |||| || | ||| || || |
Sbjct: 499 tcaacgcgctggggtcaaacgctactgttctcacgtccagcaatgtgaaggatgaaaatt 558
Query: 347 ccttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagc 406
| |||||||||||||||||||| | ||| |||| |||||||||| ||||||||||||| |
Sbjct: 559 ctttcagtaacccgaacaaggtcgtgcctgtgacaagccagctgcgcaacgccgcggaac 618
Query: 407 agatgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgctggctgagc 466
|||||||||||||||| ||| | ||||||||| || | ||||| || ||||| ||| ||
Sbjct: 619 agatgcaggtcacgctcgctgcccactccttctcctcgttcgaccttgcgcttgctcagt 678
Query: 467 ccaagcttgtggcggagat 485
|| ||||||| ||||||||
Sbjct: 679 ccgagcttgtcgcggagat 697
Score = 91.7 bits (46), Expect = 7e-017
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
|||||||| || | |||||| || ||||||||||| || || ||||| ||||||||||||
Sbjct: 213 ccactctttgtaaacgacaacgatcaaacgtggaatccagatgctatcgtcttcaactcc 272
Query: 61 tggcaacactatggnactcctagctactggatgcaga 97
|||||||| || || |||||||| |||||||||||||
Sbjct: 273 tggcaacaatacggaactcctagttactggatgcaga 309
Score = 67.9 bits (34), Expect = 1e-009
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 142 atcagttcccggtactcgagttcgctggccgcgtctgcgatcacgtggcaggatgcagag 201
||||||||| | ||||| |||| || || || ||||| ||||| ||||||||| | | |
Sbjct: 354 atcagttccagctactctggttctctagcagcatctgctatcacctggcaggattccggg 413
Query: 202 aatagcttcctgagagtgaaggtcgtgaacttcgggtcggacaccgttaacctcacggtc 261
|| |||||||||| ||| ||| | |||||||||||| |||||||||| | ||||||| ||
Sbjct: 414 aacagcttcctgaaagtaaagattgtgaacttcgggccggacaccgtgagcctcacgatc 473
Query: 262 tc 263
||
Sbjct: 474 tc 475
>gb|CN011355.1|CN011355 WHE3883_B06_C11ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE3883_B06_C11,
mRNA sequence
Length = 633
Score = 129 bits (65), Expect = 3e-028
Identities = 239/297 (80%)
Strand = Plus / Plus
Query: 142 atcagttcccggtactcgagttcgctggccgcgtctgcgatcacgtggcaggatgcagag 201
||||||||| | ||||| |||| || || || ||||| ||||| ||||||||| | |
Sbjct: 285 atcagttccagctactctggttctctagcagcatctgccatcacctggcaggattccagg 344
Query: 202 aatagcttcctgagagtgaaggtcgtgaacttcgggtcggacaccgttaacctcacggtc 261
||||||||||||| ||| ||| | ||||||||||||||||||||||| | ||||||| ||
Sbjct: 345 aatagcttcctgaaagtaaagattgtgaacttcgggtcggacaccgtgagcctcacgatc 404
Query: 262 tccacgagcggactcggggccagcgtcaacgcgctgggatcaaccgccaccgtcctcacg 321
|| | ||| || ||| ||| ||||||||||||| |||| ||| || || ||||||
Sbjct: 405 tctgtgtccgggcttcaggctagcatcaacgcgctggggtcaaacgctactgttctcacg 464
Query: 322 tctggcaacgtcatggacgagaactccttcagtaacccgaacaaggttgcgccggtgaaa 381
|| |||| || | ||| || || || |||||||||||||||||||| | ||| |||| |
Sbjct: 465 tccagcaatgtgaaggatgaaaattctttcagtaacccgaacaaggtcgtgcccgtgaca 524
Query: 382 agccagctgagcaacgccgcggagcagatgcaggtcacgctggctcctcactccttc 438
||||||||| ||||| ||||| ||||||||||||||||| ||| | |||||||||
Sbjct: 525 agccagctgcaaaacgcagcggaacagatgcaggtcacgctcgctgcgcactccttc 581
Score = 107 bits (54), Expect = 1e-021
Identities = 86/97 (88%)
Strand = Plus / Plus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
|||||||| || | ||||||||| ||||||||||| ||||| ||||| ||||||||||||
Sbjct: 144 ccactctttgtaaacgacaatgatcaaacgtggaatccggatgctatcgtcttcaactcc 203
Query: 61 tggcaacactatggnactcctagctactggatgcaga 97
|||||||| || || |||||||| |||||||||||||
Sbjct: 204 tggcaacaatacggaactcctagttactggatgcaga 240
>gb|CA602303.1|CA602303 wr1.pk0017.a11 wr1 Triticum aestivum cDNA clone wr1.pk0017.a11 5'
end, mRNA sequence
Length = 484
Score = 127 bits (64), Expect = 1e-027
Identities = 274/344 (79%)
Strand = Plus / Plus
Query: 142 atcagttcccggtactcgagttcgctggccgcgtctgcgatcacgtggcaggatgcagag 201
||||||||| | ||||| |||| || || || ||||| ||||| ||||||||| | | |
Sbjct: 11 atcagttccagctactctggttctctagcagcatctgctatcacctggcaggattccggg 70
Query: 202 aatagcttcctgagagtgaaggtcgtgaacttcgggtcggacaccgttaacctcacggtc 261
||||||||||||| ||| ||| | |||||||| ||||| |||||||| | ||||||| ||
Sbjct: 71 aatagcttcctgaaagtaaagattgtgaactttgggtcagacaccgtgagcctcacgatc 130
Query: 262 tccacgagcggactcggggccagcgtcaacgcgctgggatcaaccgccaccgtcctcacg 321
|| | || || ||| ||| ||||||||||||| |||| || || || ||||||
Sbjct: 131 tctgtgtctgggcttcaggctagcatcaacgcgctggggtcaaatgctactgttctcacg 190
Query: 322 tctggcaacgtcatggacgagaactccttcagtaacccgaacaaggttgcgccggtgaaa 381
|| |||| || | ||| || || || |||||||||||||||||||| | ||| ||||
Sbjct: 191 tccagcaatgtgaaggatgaaaattctttcagtaacccgaacaaggtcgtgcctgtgacg 250
Query: 382 agccagctgagcaacgccgcggagcagatgcaggtcacgctggctcctcactccttcacc 441
||||||||| ||||||||||||| |||||||||||||| || ||| | ||||||||| ||
Sbjct: 251 agccagctgcgcaacgccgcggaacagatgcaggtcacactcgctgcccactccttctcc 310
Query: 442 gccttcgatctggcgctggctgagcccaagcttgtggcggagat 485
| ||||| || ||||| ||| || || ||||||| ||||||||
Sbjct: 311 tcgttcgaccttgcgcttgctcagtccgagcttgtcgcggagat 354
>gb|CD906334.1|CD906334 G468.104J01R010928 G468 Triticum aestivum cDNA clone G468104J01,
mRNA sequence
Length = 758
Score = 127 bits (64), Expect = 1e-027
Identities = 274/344 (79%)
Strand = Plus / Minus
Query: 142 atcagttcccggtactcgagttcgctggccgcgtctgcgatcacgtggcaggatgcagag 201
||||||||| | ||||| |||| || || || ||||| ||||| ||||||||| | | |
Sbjct: 537 atcagttccagctactctggttctctagcagcatctgctatcacctggcaggattccggg 478
Query: 202 aatagcttcctgagagtgaaggtcgtgaacttcgggtcggacaccgttaacctcacggtc 261
||||||||||||| ||| ||| | |||||||| ||||| |||||||| | ||||||| ||
Sbjct: 477 aatagcttcctgaaagtaaagattgtgaactttgggtcagacaccgtgagcctcacgatc 418
Query: 262 tccacgagcggactcggggccagcgtcaacgcgctgggatcaaccgccaccgtcctcacg 321
|| | || || ||| ||| ||||||||||||| |||| || || || ||||||
Sbjct: 417 tctgtgtctgggcttcaggctagcatcaacgcgctggggtcaaatgctactgttctcacg 358
Query: 322 tctggcaacgtcatggacgagaactccttcagtaacccgaacaaggttgcgccggtgaaa 381
|| |||| || | ||| || || || |||||||||||||||||||| | ||| ||||
Sbjct: 357 tccagcaatgtgaaggatgaaaattctttcagtaacccgaacaaggtcgtgcctgtgacg 298
Query: 382 agccagctgagcaacgccgcggagcagatgcaggtcacgctggctcctcactccttcacc 441
||||||||| ||||||||||||| |||||||||||||| || ||| | ||||||||| ||
Sbjct: 297 agccagctgcgcaacgccgcggaacagatgcaggtcacactcgctgcccactccttctcc 238
Query: 442 gccttcgatctggcgctggctgagcccaagcttgtggcggagat 485
| ||||| || ||||| ||| || || ||||||| ||||||||
Sbjct: 237 tcgttcgaccttgcgcttgctcagtccgagcttgtcgcggagat 194
Score = 91.7 bits (46), Expect = 7e-017
Identities = 84/97 (86%)
Strand = Plus / Minus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
|||||||| || | |||||| || ||||||||||| || || ||||| ||||||||||||
Sbjct: 678 ccactctttgtaaacgacaacgatcaaacgtggaatccagatgctatcgtcttcaactcc 619
Query: 61 tggcaacactatggnactcctagctactggatgcaga 97
|||||||| || || |||||||| |||||||||||||
Sbjct: 618 tggcaacaatacggaactcctagttactggatgcaga 582
>gb|BG608382.1|BG608382 WHE2498_F12_L24ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2498_F12_L24,
mRNA sequence
Length = 621
Score = 117 bits (59), Expect = 1e-024
Identities = 236/295 (80%)
Strand = Plus / Plus
Query: 142 atcagttcccggtactcgagttcgctggccgcgtctgcgatcacgtggcaggatgcagag 201
||||||||| | ||||| |||| || || || ||||| ||||| ||||||||| | |
Sbjct: 327 atcagttccagctactctggttctctagcagcatctgccatcacctggcaggattccagg 386
Query: 202 aatagcttcctgagagtgaaggtcgtgaacttcgggtcggacaccgttaacctcacggtc 261
||||||||||||| ||| ||| | ||||||||||||||||||||||| | ||||||| ||
Sbjct: 387 aatagcttcctgaaagtaaagattgtgaacttcgggtcggacaccgtgagcctcacgatc 446
Query: 262 tccacgagcggactcggggccagcgtcaacgcgctgggatcaaccgccaccgtcctcacg 321
|| | ||| || ||| ||| ||||||||||||| |||| ||| || || ||||||
Sbjct: 447 tctgtgtccgggcttcaggctagcatcaacgcgctggggtcaaacgctactgttctcacg 506
Query: 322 tctggcaacgtcatggacgagaactccttcagtaacccgaacaaggttgcgccggtgaaa 381
|| |||| || | ||| || || || ||||||||||||||||| || | ||| |||| |
Sbjct: 507 tccagcaatgtgaaggatgaaaattctttcagtaacccgaacaaagtcgtgcccgtgaca 566
Query: 382 agccagctgagcaacgccgcggagcagatgcaggtcacgctggctcctcactcct 436
||||||||| ||||| ||||| ||||||||||||||||| ||| | |||||||
Sbjct: 567 agccagctgcaaaacgcagcggaacagatgcaggtcacgctcgctgcgcactcct 621
Score = 107 bits (54), Expect = 1e-021
Identities = 86/97 (88%)
Strand = Plus / Plus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
|||||||| || | ||||||||| ||||||||||| ||||| ||||| ||||||||||||
Sbjct: 186 ccactctttgtaaacgacaatgatcaaacgtggaatccggatgctatcgtcttcaactcc 245
Query: 61 tggcaacactatggnactcctagctactggatgcaga 97
|||||||| || || |||||||| |||||||||||||
Sbjct: 246 tggcaacaatacggaactcctagttactggatgcaga 282
>gb|CK217709.1|CK217709 FGAS029711 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1090
Score = 113 bits (57), Expect = 2e-023
Identities = 117/137 (85%)
Strand = Plus / Plus
Query: 349 ttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcag 408
|||||||||||| ||||||| | ||| |||| |||||||||| ||||||||||||| |||
Sbjct: 58 ttcagtaacccggacaaggtcgtgcctgtgacaagccagctgcgcaacgccgcggaacag 117
Query: 409 atgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgctggctgagccc 468
|||||||||||||| ||| | ||||||||| || | ||||| || ||||| ||| || ||
Sbjct: 118 atgcaggtcacgctcgctgcccactccttctcctcgttcgaccttgcgcttgctcagtcc 177
Query: 469 aagcttgtggcggagat 485
||||||| ||||||||
Sbjct: 178 gagcttgtcgcggagat 194
>gb|BF201396.1|BF201396 WHE1770_B09_D18ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1770_B09_D18, mRNA sequence
Length = 423
Score = 107 bits (54), Expect = 1e-021
Identities = 86/97 (88%)
Strand = Plus / Plus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
|||||||| || | ||||||||| ||||||||||| ||||| ||||| ||||||||||||
Sbjct: 34 ccactctttgtaaacgacaatgatcaaacgtggaatccggatgctatcgtcttcaactcc 93
Query: 61 tggcaacactatggnactcctagctactggatgcaga 97
|||||||| || || |||||||| |||||||||||||
Sbjct: 94 tggcaacaatacggaactcctagttactggatgcaga 130
Score = 97.6 bits (49), Expect = 1e-018
Identities = 199/249 (79%)
Strand = Plus / Plus
Query: 142 atcagttcccggtactcgagttcgctggccgcgtctgcgatcacgtggcaggatgcagag 201
||||||||| | ||||| |||| || || || ||||| ||||| ||||||||| | |
Sbjct: 175 atcagttccagctactctggttctctagcagcatctgccatcacctggcaggattccagg 234
Query: 202 aatagcttcctgagagtgaaggtcgtgaacttcgggtcggacaccgttaacctcacggtc 261
||||||||||||| ||| ||| | ||||||||||||||||||||||| | ||||||| ||
Sbjct: 235 aatagcttcctgaaagtaaagattgtgaacttcgggtcggacaccgtgagcctcacgatc 294
Query: 262 tccacgagcggactcggggccagcgtcaacgcgctgggatcaaccgccaccgtcctcacg 321
|| | ||| || ||| ||| ||||||||||||| |||| ||| || || ||||||
Sbjct: 295 tctgtgtccgggcttcaggctagcatcaacgcgctggggtcaaacgctactgttctcacg 354
Query: 322 tctggcaacgtcatggacgagaactccttcagtaacccgaacaaggttgcgccggtgaaa 381
|| |||| || | ||| || || || |||||||||||||||||||| | ||| |||| |
Sbjct: 355 tccagcaatgtgaaggatgaaaattctttcagtaacccgaacaaggtcgtgcccgtgaca 414
Query: 382 agccagctg 390
|||||||||
Sbjct: 415 agccagctg 423
>gb|CD871498.1|CD871498 AZO2.118G02F010207 AZO2 Triticum aestivum cDNA clone AZO2118G02,
mRNA sequence
Length = 695
Score = 107 bits (54), Expect = 1e-021
Identities = 86/97 (88%)
Strand = Plus / Plus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
|||||||| || | ||||||||| ||||||||||| ||||| ||||| ||||||||||||
Sbjct: 343 ccactctttgtaaacgacaatgatcaaacgtggaatccggatgctatcgtcttcaactcc 402
Query: 61 tggcaacactatggnactcctagctactggatgcaga 97
|||||||| || || |||||||| |||||||||||||
Sbjct: 403 tggcaacaatacggaactcctagttactggatgcaga 439
Score = 75.8 bits (38), Expect = 4e-012
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 142 atcagttcccggtactcgagttcgctggccgcgtctgcgatcacgtggcaggatgcagag 201
||||||||| | ||||| |||| || || || ||||| ||||| ||||||||| | |
Sbjct: 484 atcagttccagctactctggttctctagcagcatctgccatcacctggcaggattccagg 543
Query: 202 aatagcttcctgagagtgaaggtcgtgaacttcgggtcggacaccgttaacctcacggtc 261
||||||||||||| ||| ||| | ||||||||||||||||||||||| | ||||||| ||
Sbjct: 544 aatagcttcctgaaagtaaagattgtgaacttcgggtcggacaccgtgagcctcacgatc 603
Query: 262 tc 263
||
Sbjct: 604 tc 605
>gb|CK196253.1|CK196253 FGAS004703 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 828
Score = 105 bits (53), Expect = 5e-021
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 349 ttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcag 408
|||||||||||||||||||| | ||| |||| ||||||||| ||||||||||||| |||
Sbjct: 485 ttcagtaacccgaacaaggtcgtgcctgtgacgagccagctgcgcaacgccgcggaacag 426
Query: 409 atgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgctggctgagccc 468
||||||||||| || ||| | ||||||||| || | ||||| || ||||| ||| || ||
Sbjct: 425 atgcaggtcacactcgctgcccactccttctcctcgttcgaccttgcgcttgctcagtcc 366
Query: 469 aagcttgtggcggagat 485
||||||| ||||||||
Sbjct: 365 gagcttgtcgcggagat 349
>gb|CK199568.1|CK199568 FGAS008071 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 873
Score = 105 bits (53), Expect = 5e-021
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 349 ttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcag 408
|||||||||||||||||||| | ||| |||| ||||||||| ||||||||||||| |||
Sbjct: 462 ttcagtaacccgaacaaggtcgtgcctgtgacgagccagctgcgcaacgccgcggaacag 403
Query: 409 atgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgctggctgagccc 468
||||||||||| || ||| | ||||||||| || | ||||| || ||||| ||| || ||
Sbjct: 402 atgcaggtcacactcgctgcccactccttctcctcgttcgaccttgcgcttgctcagtcc 343
Query: 469 aagcttgtggcggagat 485
||||||| ||||||||
Sbjct: 342 gagcttgtcgcggagat 326
Score = 71.9 bits (36), Expect = 6e-011
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 43 gctattgtcttcaactcctggcaacactatggnactcctagctactggatgcaga 97
|||||||| ||||||||||||||||| || || |||||||| |||||||||||||
Sbjct: 767 gctattgttttcaactcctggcaacaatacggaactcctagttactggatgcaga 713
Score = 67.9 bits (34), Expect = 1e-009
Identities = 100/122 (81%)
Strand = Plus / Minus
Query: 142 atcagttcccggtactcgagttcgctggccgcgtctgcgatcacgtggcaggatgcagag 201
||||||||| | ||||| |||| || || || ||||| ||||| ||||||||| | | |
Sbjct: 668 atcagttccagctactctggttctctagcagcatctgctatcacctggcaggattccggg 609
Query: 202 aatagcttcctgagagtgaaggtcgtgaacttcgggtcggacaccgttaacctcacggtc 261
||||||||||||| ||| ||| | |||||||| ||||| |||||||| | ||||||| ||
Sbjct: 608 aatagcttcctgaaagtaaagattgtgaactttgggtcagacaccgtgagcctcacgatc 549
Query: 262 tc 263
||
Sbjct: 548 tc 547
>gb|CK193532.1|CK193532 FGAS001946 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 815
Score = 103 bits (52), Expect = 2e-020
Identities = 166/204 (81%)
Strand = Plus / Minus
Query: 282 cagcgtcaacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacga 341
|||| |||| ||||| ||||| |||||||| || ||||| ||||||| || ||||||||
Sbjct: 524 cagcatcaatgcgctcggatccaccgccactgttctcacatctggcagtgtaatggacga 465
Query: 342 gaactccttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgc 401
|||||||||| |||||| |||||||||| |||||||| | | || || | |||||| |
Sbjct: 464 gaactccttcgctaacccaaacaaggttgtgccggtgacgatcgagttgcgtaacgcctc 405
Query: 402 ggagcagatgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgctggc 461
|||| ||||| |||| |||||| |||| ||||| ||| || ||||| |||||||||||
Sbjct: 404 ggaggagatggaggtgacgctgcctccccactctctcagtgcattcgacctggcgctggc 345
Query: 462 tgagcccaagcttgtggcggagat 485
|| ||| |||||| ||||||||
Sbjct: 344 gcagtccaggcttgtagcggagat 321
>gb|CA738363.1|CA738363 wpi2s.pk006.i20 wpi2s Triticum aestivum cDNA clone wpi2s.pk006.i20
5' end, mRNA sequence
Length = 285
Score = 99.6 bits (50), Expect = 3e-019
Identities = 107/126 (84%)
Strand = Plus / Minus
Query: 360 gaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcagatgcaggtcac 419
||||||||| | ||| |||| |||||||||| ||||||||||||| ||||||||||||||
Sbjct: 263 gaacaaggtcgtgcctgtgacaagccagctgcgcaacgccgcggaacagatgcaggtcac 204
Query: 420 gctggctcctcactccttcaccgccttcgatctggcgctggctgagcccaagcttgtggc 479
||| ||| | ||||||||| || | ||||| || ||||| ||| || || ||||||| ||
Sbjct: 203 gctcgctgcccactccttctcctcgttcgaccttgcgcttgctcagtccgagcttgtcgc 144
Query: 480 ggagat 485
||||||
Sbjct: 143 ggagat 138
>gb|BJ232318.1|BJ232318 BJ232318 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe12a24 5', mRNA sequence
Length = 683
Score = 95.6 bits (48), Expect = 4e-018
Identities = 165/204 (80%)
Strand = Plus / Plus
Query: 282 cagcgtcaacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacga 341
|||| |||| ||||| ||||| ||||| ||||| ||||| || |||| || ||||||||
Sbjct: 450 cagcatcaatgcgctcggatccaccgcgaccgttctcacatccggcagtgtaatggacga 509
Query: 342 gaactccttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgc 401
|||||| ||| |||||| || ||||||| |||||||| | | || || | ||||||||
Sbjct: 510 gaactctttcgctaacccaaataaggttgtgccggtgatgatcgagttgcgtaacgccgc 569
Query: 402 ggagcagatgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgctggc 461
|||| ||||| ||||||||||| |||| ||||| ||| || ||||| |||||||||||
Sbjct: 570 ggaggagatggaggtcacgctgcctccccactctctcagtgcattcgacctggcgctggc 629
Query: 462 tgagcccaagcttgtggcggagat 485
|| ||| |||||| ||||||||
Sbjct: 630 gcagtccaggcttgtagcggagat 653
Score = 85.7 bits (43), Expect = 4e-015
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 28 acgtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctac 87
||||||||||| |||||||| ||||||||||||||||| || ||||| ||||| || |||
Sbjct: 196 acgtggaacccagacgctatcgtcttcaactcctggcagcaatatgggactcccagttac 255
Query: 88 tggatgcaga 97
||||||||||
Sbjct: 256 tggatgcaga 265
Score = 56.0 bits (28), Expect = 4e-006
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 162 ttcgctggccgcgtctgcgatcacgtggcaggatgcagagaatagcttcctgagagtgaa 221
||||||||| || || |||||||||||||| |||| ||||| ||| |||||||||| ||
Sbjct: 330 ttcgctggcagcatccgcgatcacgtggcatgatgacgagaacagcatcctgagagttaa 389
Query: 222 ggtcgtgaactt 233
| | ||||||||
Sbjct: 390 gattgtgaactt 401
>gb|BJ237971.1|BJ237971 BJ237971 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe12a24 3', mRNA sequence
Length = 648
Score = 95.6 bits (48), Expect = 4e-018
Identities = 165/204 (80%)
Strand = Plus / Minus
Query: 282 cagcgtcaacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacga 341
|||| |||| ||||| ||||| ||||| ||||| ||||| || |||| || ||||||||
Sbjct: 400 cagcatcaatgcgctcggatccaccgcgaccgttctcacatccggcagtgtaatggacga 341
Query: 342 gaactccttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgc 401
|||||| ||| |||||| || ||||||| |||||||| | | || || | ||||||||
Sbjct: 340 gaactctttcgctaacccaaataaggttgtgccggtgatgatcgagttgcgtaacgccgc 281
Query: 402 ggagcagatgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgctggc 461
|||| ||||| ||||||||||| |||| ||||| ||| || ||||| |||||||||||
Sbjct: 280 ggaggagatggaggtcacgctgcctccccactctctcagtgcattcgacctggcgctggc 221
Query: 462 tgagcccaagcttgtggcggagat 485
|| ||| |||||| ||||||||
Sbjct: 220 gcagtccaggcttgtagcggagat 197
Score = 67.9 bits (34), Expect = 1e-009
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 34 aacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactggatg 93
||||| |||||||| ||||||||||| ||||| || ||||| ||||| || |||||||||
Sbjct: 648 aacccagacgctatcgtcttcaactcntggcagcaatatgggactcccagttactggatg 589
Query: 94 caga 97
||||
Sbjct: 588 caga 585
Score = 56.0 bits (28), Expect = 4e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 162 ttcgctggccgcgtctgcgatcacgtggcaggatgcagagaatagcttcctgagagtgaa 221
||||||||| || || |||||||||||||| |||| ||||| ||| |||||||||| ||
Sbjct: 520 ttcgctggcagcatccgcgatcacgtggcatgatgacgagaacagcatcctgagagttaa 461
Query: 222 ggtcgtgaactt 233
| | ||||||||
Sbjct: 460 gattgtgaactt 449
>gb|BJ298062.1|BJ298062 BJ298062 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl23d07 3', mRNA sequence
Length = 398
Score = 95.6 bits (48), Expect = 4e-018
Identities = 165/204 (80%)
Strand = Plus / Minus
Query: 282 cagcgtcaacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacga 341
|||| |||| ||||| ||||| ||||||||||| ||||| ||||||| || ||||||||
Sbjct: 350 cagcatcaatgcgctcggatccaccgccaccgttctcacatctggcagtgtaatggacga 291
Query: 342 gaactccttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgc 401
|||||| ||| |||||| |||||||||| |||||||| | | || || | ||||| |
Sbjct: 290 gaactctttcgctaacccaaacaaggttgtgccggtgacgatcgagttgcgtaacgcgtc 231
Query: 402 ggagcagatgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgctggc 461
|||| ||||| ||||||||||| |||| ||||| | | || ||||| |||||||||||
Sbjct: 230 ggaggagatggaggtcacgctgcctccccactctctgagtgcattcgacctggcgctggc 171
Query: 462 tgagcccaagcttgtggcggagat 485
|| ||| |||||| ||||||||
Sbjct: 170 gcagtccaggcttgtagcggagat 147
>gb|AL820751.1|AL820751 AL820751 O:232 Triticum aestivum cDNA clone A11_O232_plate_6, mRNA
sequence
Length = 445
Score = 95.6 bits (48), Expect = 4e-018
Identities = 147/180 (81%)
Strand = Plus / Plus
Query: 282 cagcgtcaacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacga 341
|||| |||| ||||| ||||| |||||||| || ||||| ||||||| || ||||||||
Sbjct: 253 cagcatcaatgcgctcggatccaccgccactgttctcacatctggcagtgtaatggacga 312
Query: 342 gaactccttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgc 401
|||||||||| |||||| ||| |||||| |||||||| | | || || | |||||| |
Sbjct: 313 gaactccttcgctaacccaaacgaggttgtgccggtgacgatcgagttgcgtaacgcctc 372
Query: 402 ggagcagatgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgctggc 461
|||| ||||| |||| ||||||||||| ||||| ||| || ||||| |||||||||||
Sbjct: 373 ggaggagatggaggtgacgctggctccccactctctcagtgcattcgacctggcgctggc 432
Score = 69.9 bits (35), Expect = 3e-010
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 40 gacgctattgtcttcaactcctggcaacactatggnactcctagctactggatgcaga 97
|||||||| ||||||||||||||||| || ||||| ||||| || |||||||||||||
Sbjct: 11 gacgctatcgtcttcaactcctggcagcaatatggaactcccagttactggatgcaga 68
Score = 58.0 bits (29), Expect = 1e-006
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 161 gttcgctggccgcgtctgcgatcacgtggcaggatgcagagaatagcttcctgagagtga 220
|||||||||| || || | ||||||||||| |||| ||||| |||||||||||||| |
Sbjct: 132 gttcgctggcagcatccgtgatcacgtggcttgatgacgagaacagcttcctgagagtta 191
Query: 221 aggtcgtgaactt 233
|||| ||||||||
Sbjct: 192 aggttgtgaactt 204
>gb|CD872145.1|CD872145 AZO2.119O23R010403 AZO2 Triticum aestivum cDNA clone AZO2119O23,
mRNA sequence
Length = 768
Score = 95.6 bits (48), Expect = 4e-018
Identities = 165/204 (80%)
Strand = Plus / Minus
Query: 282 cagcgtcaacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacga 341
|||| |||| ||||| ||||| ||||| ||||| ||||| || |||| || ||||||||
Sbjct: 386 cagcatcaatgcgctcggatccaccgcgaccgttctcacatccggcagtgtaatggacga 327
Query: 342 gaactccttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgc 401
|||||| ||| |||||| || ||||||| |||||||| | | || || | ||||||||
Sbjct: 326 gaactctttcgctaacccaaataaggttgtgccggtgatgatcgagttgcgtaacgccgc 267
Query: 402 ggagcagatgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgctggc 461
|||| ||||| ||||||||||| |||| ||||| ||| || ||||| |||||||||||
Sbjct: 266 ggaggagatggaggtcacgctgcctccccactctctcagtgcattcgacctggcgctggc 207
Query: 462 tgagcccaagcttgtggcggagat 485
|| ||| |||||| ||||||||
Sbjct: 206 gcagtccaggcttgtagcggagat 183
Score = 85.7 bits (43), Expect = 4e-015
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 28 acgtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctac 87
||||||||||| |||||||| ||||||||||||||||| || ||||| ||||| || |||
Sbjct: 640 acgtggaacccagacgctatcgtcttcaactcctggcagcaatatgggactcccagttac 581
Query: 88 tggatgcaga 97
||||||||||
Sbjct: 580 tggatgcaga 571
Score = 56.0 bits (28), Expect = 4e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 162 ttcgctggccgcgtctgcgatcacgtggcaggatgcagagaatagcttcctgagagtgaa 221
||||||||| || || |||||||||||||| |||| ||||| ||| |||||||||| ||
Sbjct: 506 ttcgctggcagcatccgcgatcacgtggcatgatgacgagaacagcatcctgagagttaa 447
Query: 222 ggtcgtgaactt 233
| | ||||||||
Sbjct: 446 gattgtgaactt 435
>gb|CD902077.1|CD902077 G356.105N09R011023 G356 Triticum aestivum cDNA clone G356105N09,
mRNA sequence
Length = 665
Score = 95.6 bits (48), Expect = 4e-018
Identities = 165/204 (80%)
Strand = Plus / Minus
Query: 282 cagcgtcaacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacga 341
|||| |||| ||||| ||||| ||||| ||||| ||||| || |||| || ||||||||
Sbjct: 386 cagcatcaatgcgctcggatccaccgcgaccgttctcacatccggcagtgtaatggacga 327
Query: 342 gaactccttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgc 401
|||||| ||| |||||| || ||||||| |||||||| | | || || | ||||||||
Sbjct: 326 gaactctttcgctaacccaaataaggttgtgccggtgatgatcgagttgcgtaacgccgc 267
Query: 402 ggagcagatgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgctggc 461
|||| ||||| ||||||||||| |||| ||||| ||| || ||||| |||||||||||
Sbjct: 266 ggaggagatggaggtcacgctgcctccccactctctcagtgcattcgacctggcgctggc 207
Query: 462 tgagcccaagcttgtggcggagat 485
|| ||| |||||| ||||||||
Sbjct: 206 gcagtccaggcttgtagcggagat 183
Score = 56.0 bits (28), Expect = 4e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 162 ttcgctggccgcgtctgcgatcacgtggcaggatgcagagaatagcttcctgagagtgaa 221
||||||||| || || |||||||||||||| |||| ||||| ||| |||||||||| ||
Sbjct: 506 ttcgctggcagcatccgcgatcacgtggcatgatgacgagaacagcatcctgagagttaa 447
Query: 222 ggtcgtgaactt 233
| | ||||||||
Sbjct: 446 gattgtgaactt 435
>gb|CD914064.1|CD914064 G550.120H10R010920 G550 Triticum aestivum cDNA clone G550120H10,
mRNA sequence
Length = 629
Score = 95.6 bits (48), Expect = 4e-018
Identities = 165/204 (80%)
Strand = Plus / Minus
Query: 282 cagcgtcaacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacga 341
|||| |||| ||||| ||||| ||||||||||| ||||| ||||||| || ||||||||
Sbjct: 393 cagcatcaatgcgctcggatccaccgccaccgttctcacatctggcagtgtaatggacga 334
Query: 342 gaactccttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgc 401
|||||| ||| |||||| |||||||||| |||||||| | | || || | ||||| |
Sbjct: 333 gaactctttcgctaacccaaacaaggttgtgccggtgacgatcgagttgcgtaacgcgtc 274
Query: 402 ggagcagatgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgctggc 461
|||| ||||| ||||||||||| |||| ||||| | | || ||||| |||||||||||
Sbjct: 273 ggaggagatggaggtcacgctgcctccccactctctgagtgcattcgacctggcgctggc 214
Query: 462 tgagcccaagcttgtggcggagat 485
|| ||| |||||| ||||||||
Sbjct: 213 gcagtccaggcttgtagcggagat 190
Score = 73.8 bits (37), Expect = 2e-011
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 161 gttcgctggccgcgtctgcgatcacgtggcaggatgcagagaatagcttcctgagagtga 220
|||||||||| || || |||||||||||||| |||| || || ||||||||||||||||
Sbjct: 514 gttcgctggcagcatccgcgatcacgtggcatgatgacgataacagcttcctgagagtga 455
Query: 221 aggtcgtgaacttcggg 237
|| | ||||||||||||
Sbjct: 454 agattgtgaacttcggg 438
Score = 60.0 bits (30), Expect = 2e-007
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 49 gtcttcaactcctggcaacactatggnactcctagctactggatgcaga 97
||||||||||||||||| || ||||| ||||| || |||||||||||||
Sbjct: 626 gtcttcaactcctggcagcaatatggaactcccagttactggatgcaga 578
>gb|CD920305.1|CD920305 G608.116J13F010912 G608 Triticum aestivum cDNA clone G608116J13,
mRNA sequence
Length = 416
Score = 95.6 bits (48), Expect = 4e-018
Identities = 165/204 (80%)
Strand = Plus / Plus
Query: 282 cagcgtcaacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacga 341
|||| |||| ||||| ||||| ||||||||||| ||||| ||||||| || ||||||||
Sbjct: 25 cagcatcaatgcgctcggatccaccgccaccgttctcacatctggcagtgtaatggacga 84
Query: 342 gaactccttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgc 401
|||||| ||| |||||| |||||||||| |||||||| | | || || | ||||| |
Sbjct: 85 gaactctttcgctaacccaaacaaggttgtgccggtgacgatcgagttgcgtaacgcgtc 144
Query: 402 ggagcagatgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgctggc 461
|||| ||||| ||||||||||| |||| ||||| | | || ||||| |||||||||||
Sbjct: 145 ggaggagatggaggtcacgctgcctccccactctctgagtgcattcgacctggcgctggc 204
Query: 462 tgagcccaagcttgtggcggagat 485
|| ||| |||||| ||||||||
Sbjct: 205 gcagtccaggcttgtagcggagat 228
>gb|CK205807.1|CK205807 FGAS017352 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1060
Score = 95.6 bits (48), Expect = 4e-018
Identities = 165/204 (80%)
Strand = Plus / Minus
Query: 282 cagcgtcaacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacga 341
|||| |||| ||||| ||||| ||||| ||||| ||||| || |||| || ||||||||
Sbjct: 412 cagcatcaatgcgctcggatccaccgcgaccgttctcacatccggcagtgtaatggacga 353
Query: 342 gaactccttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgc 401
|||||| ||| |||||| || ||||||| |||||||| | | || || | ||||||||
Sbjct: 352 gaactctttcgctaacccaaataaggttgtgccggtgatgatcgagttgcgtaacgccgc 293
Query: 402 ggagcagatgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgctggc 461
|||| ||||| ||||||||||| |||| ||||| ||| || ||||| |||||||||||
Sbjct: 292 ggaggagatggaggtcacgctgcctccccactctctcagtgcattcgacctggcgctggc 233
Query: 462 tgagcccaagcttgtggcggagat 485
|| ||| |||||| ||||||||
Sbjct: 232 gcagtccaggcttgtagcggagat 209
Score = 85.7 bits (43), Expect = 4e-015
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 28 acgtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctac 87
||||||||||| |||||||| ||||||||||||||||| || ||||| ||||| || |||
Sbjct: 666 acgtggaacccagacgctatcgtcttcaactcctggcagcaatatgggactcccagttac 607
Query: 88 tggatgcaga 97
||||||||||
Sbjct: 606 tggatgcaga 597
Score = 56.0 bits (28), Expect = 4e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 162 ttcgctggccgcgtctgcgatcacgtggcaggatgcagagaatagcttcctgagagtgaa 221
||||||||| || || |||||||||||||| |||| ||||| ||| |||||||||| ||
Sbjct: 532 ttcgctggcagcatccgcgatcacgtggcatgatgacgagaacagcatcctgagagttaa 473
Query: 222 ggtcgtgaactt 233
| | ||||||||
Sbjct: 472 gattgtgaactt 461
>gb|CK208940.1|CK208940 FGAS020666 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1096
Score = 95.6 bits (48), Expect = 4e-018
Identities = 165/204 (80%)
Strand = Plus / Plus
Query: 282 cagcgtcaacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacga 341
|||| |||| ||||| ||||| ||||||||||| ||||| ||||||| || ||||||||
Sbjct: 461 cagcatcaatgcgctcggatccaccgccaccgttctcacatctggcagtgtaatggacga 520
Query: 342 gaactccttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgc 401
|||||| ||| |||||| |||||||||| |||||||| | | || || | ||||| |
Sbjct: 521 gaactctttcgctaacccaaacaaggttgtgccggtgacgatcgagttgcgtaacgcgtc 580
Query: 402 ggagcagatgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgctggc 461
|||| ||||| ||||||||||| |||| ||||| | | || ||||| |||||||||||
Sbjct: 581 ggaggagatggaggtcacgctgcctccccactctctgagtgcattcgacctggcgctggc 640
Query: 462 tgagcccaagcttgtggcggagat 485
|| ||| |||||| ||||||||
Sbjct: 641 gcagtccaggcttgtagcggagat 664
Score = 85.7 bits (43), Expect = 4e-015
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 28 acgtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctac 87
||||||||||| |||||||| ||||||||||||||||| || ||||| ||||| || |||
Sbjct: 207 acgtggaacccagacgctatcgtcttcaactcctggcagcaatatggaactcccagttac 266
Query: 88 tggatgcaga 97
||||||||||
Sbjct: 267 tggatgcaga 276
Score = 73.8 bits (37), Expect = 2e-011
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 161 gttcgctggccgcgtctgcgatcacgtggcaggatgcagagaatagcttcctgagagtga 220
|||||||||| || || |||||||||||||| |||| || || ||||||||||||||||
Sbjct: 340 gttcgctggcagcatccgcgatcacgtggcatgatgacgataacagcttcctgagagtga 399
Query: 221 aggtcgtgaacttcggg 237
|| | ||||||||||||
Sbjct: 400 agattgtgaacttcggg 416
>gb|CA601651.1|CA601651 wr1.pk0002.c10 wr1 Triticum aestivum cDNA clone wr1.pk0002.c10 5'
end, mRNA sequence
Length = 365
Score = 93.7 bits (47), Expect = 2e-017
Identities = 114/137 (83%)
Strand = Plus / Plus
Query: 349 ttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcag 408
|||||||||||||||||||| | ||| || | |||||||| ||||||||||||| |||
Sbjct: 25 ttcagtaacccgaacaaggtcgtgcctgtnacgngccagctgcgcaacgccgcggaacag 84
Query: 409 atgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgctggctgagccc 468
||||||||||| || ||| | ||||||||| || | ||||| || ||||| ||| || ||
Sbjct: 85 atgcaggtcacactcgctgcccactccttctcctcgttcgaccttgcgcttgctcagtcc 144
Query: 469 aagcttgtggcggagat 485
||||||| ||||||||
Sbjct: 145 gagcttgtcgcggagat 161
>gb|CA737355.1|CA737355 wpi2s.pk001.d3 wpi2s Triticum aestivum cDNA clone wpi2s.pk001.d3 5'
end, mRNA sequence
Length = 253
Score = 93.7 bits (47), Expect = 2e-017
Identities = 107/127 (84%)
Strand = Plus / Minus
Query: 359 cgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagcagatgcaggtca 418
|||||||||| | | | |||| |||||||||| ||||||||||||| |||||||||||||
Sbjct: 246 cgaacaaggtcgtgtctgtgacaagccagctgcgcaacgccgcggaacagatgcaggtca 187
Query: 419 cgctggctcctcactccttcaccgccttcgatctggcgctggctgagcccaagcttgtgg 478
|||| ||| | ||||||||| || | ||||| || ||||| ||| || || ||||||| |
Sbjct: 186 cgctcgctgcccactccttctcctcgttcgaccttgcgcttgctcagtccgagcttgtcg 127
Query: 479 cggagat 485
|||||||
Sbjct: 126 cggagat 120
>gb|BE442831.1|BE442831 WHE1107_H01_P01ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1107_H01_P01,
mRNA sequence
Length = 652
Score = 91.7 bits (46), Expect = 7e-017
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
|||||||| || | |||||| || ||||||||||| || || ||||| ||||||||||||
Sbjct: 431 ccactctttgtaaacgacaacgatcaaacgtggaatccagatgctatcgtcttcaactcc 490
Query: 61 tggcaacactatggnactcctagctactggatgcaga 97
|||||||| || || |||||||| |||||||||||||
Sbjct: 491 tggcaacaatacggaactcctagttactggatgcaga 527
Score = 42.1 bits (21), Expect = 0.058
Identities = 60/73 (82%)
Strand = Plus / Plus
Query: 142 atcagttcccggtactcgagttcgctggccgcgtctgcgatcacgtggcaggatgcagag 201
||||||||| | ||||| |||| || || || ||||| ||||| ||||||||| | | |
Sbjct: 572 atcagttccagctactctggttctctagcagcatctgctatcacctggcaggattccggg 631
Query: 202 aatagcttcctga 214
|||||||||||||
Sbjct: 632 aatagcttcctga 644
>gb|BE444633.1|BE444633 WHE1126_H06_O12ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1126_H06_O12,
mRNA sequence
Length = 578
Score = 91.7 bits (46), Expect = 7e-017
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
|||||||| || | |||||| || ||||||||||| || || ||||| ||||||||||||
Sbjct: 433 ccactctttgtaaacgacaacgatcaaacgtggaatccagatgctatcgtcttcaactcc 492
Query: 61 tggcaacactatggnactcctagctactggatgcaga 97
|||||||| || || |||||||| |||||||||||||
Sbjct: 493 tggcaacaatacggaactcctagttactggatgcaga 529
>gb|BE446752.1|BE446752 WHE1140_G07_N14ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1140_G07_N14,
mRNA sequence
Length = 522
Score = 91.7 bits (46), Expect = 7e-017
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
|||||||| || | |||||| || ||||||||||| || || ||||| ||||||||||||
Sbjct: 344 ccactctttgtaaacgacaacgatcaaacgtggaatccagatgctatcgtcttcaactcc 403
Query: 61 tggcaacactatggnactcctagctactggatgcaga 97
|||||||| || || |||||||| |||||||||||||
Sbjct: 404 tggcaacaatacggaactcctagttactggatgcaga 440
>gb|BE591139.1|BE591139 WHE1655-1658_E05_E05ZS Wheat heat stressed flag leaf cDNA library
Triticum aestivum cDNA clone WHE1655-1658_E05_E05, mRNA
sequence
Length = 490
Score = 91.7 bits (46), Expect = 7e-017
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
|||||||| || | |||||| || ||||||||||| || || ||||| ||||||||||||
Sbjct: 309 ccactctttgtaaacgacaacgatcaaacgtggaatccagatgctatcgtcttcaactcc 368
Query: 61 tggcaacactatggnactcctagctactggatgcaga 97
|||||||| || || |||||||| |||||||||||||
Sbjct: 369 tggcaacaatacggaactcctagttactggatgcaga 405
>gb|AJ612294.1|AJ612294 AJ612294 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 06506R, mRNA
sequence
Length = 774
Score = 91.7 bits (46), Expect = 7e-017
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
|||||||| || | |||||| || ||||||||||| || || ||||| ||||||||||||
Sbjct: 536 ccactctttgtaaacgacaacgatcaaacgtggaatccagatgctatcgtcttcaactcc 595
Query: 61 tggcaacactatggnactcctagctactggatgcaga 97
|||||||| || || |||||||| |||||||||||||
Sbjct: 596 tggcaacaatacggaactcctagttactggatgcaga 632
>gb|CV775974.1|CV775974 FGAS070378 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 834
Score = 91.7 bits (46), Expect = 7e-017
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
|||||||| || | |||||| || ||||||||||| || || ||||| ||||||||||||
Sbjct: 342 ccactctttgtaaacgacaacgatcaaacgtggaatccagatgctatcgtcttcaactcc 401
Query: 61 tggcaacactatggnactcctagctactggatgcaga 97
|||||||| || || |||||||| |||||||||||||
Sbjct: 402 tggcaacaatacggaactcctagttactggatgcaga 438
Score = 87.7 bits (44), Expect = 1e-015
Identities = 114/136 (83%), Gaps = 1/136 (0%)
Strand = Plus / Plus
Query: 287 tcaacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacgagaact 346
||||||||||||| |||| ||| || || |||||||| |||| || | ||| || || |
Sbjct: 628 tcaacgcgctggggtcaaacgctactgttctcacgtccagcaatgtgaaggatgaaaatt 687
Query: 347 ccttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgcggagc 406
| ||||||||||||| |||||| | ||| ||||| ||||||||| ||||||||||||| |
Sbjct: 688 ctttcagtaacccga-caaggtcgtgcctgtgaacagccagctgcgcaacgccgcggaac 746
Query: 407 agatgcaggtcacgct 422
|||||||||| |||||
Sbjct: 747 agatgcaggttacgct 762
Score = 67.9 bits (34), Expect = 1e-009
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 142 atcagttcccggtactcgagttcgctggccgcgtctgcgatcacgtggcaggatgcagag 201
||||||||| | ||||| |||| || || || ||||| ||||| ||||||||| | | |
Sbjct: 483 atcagttccagctactctggttctctagcagcatctgctatcacctggcaggattccggg 542
Query: 202 aatagcttcctgagagtgaaggtcgtgaacttcgggtcggacaccgttaacctcacggtc 261
|| |||||||||| ||| ||| | |||||||||||| |||||||||| | ||||||| ||
Sbjct: 543 aacagcttcctgaaagtaaagattgtgaacttcgggccggacaccgtgagcctcacgatc 602
Query: 262 tc 263
||
Sbjct: 603 tc 604
>gb|CV780543.1|CV780543 FGAS074954 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 887
Score = 91.7 bits (46), Expect = 7e-017
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 1 ccactcttcgtgaccgacaatgaccaaacgtggaacccggacgctattgtcttcaactcc 60
|||||||| || | |||||| || ||||||||||| || || ||||| ||||||||||||
Sbjct: 301 ccactctttgtaaacgacaacgatcaaacgtggaatccagatgctatcgtcttcaactcc 360
Query: 61 tggcaacactatggnactcctagctactggatgcaga 97
|||||||| || || |||||||| |||||||||||||
Sbjct: 361 tggcaacaatacggaactcctagttactggatgcaga 397
Score = 67.9 bits (34), Expect = 1e-009
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 142 atcagttcccggtactcgagttcgctggccgcgtctgcgatcacgtggcaggatgcagag 201
||||||||| | ||||| |||| || || || ||||| ||||| ||||||||| | | |
Sbjct: 442 atcagttccagctactctggttctctagcagcatctgctatcacctggcaggattccggg 501
Query: 202 aatagcttcctgagagtgaaggtcgtgaacttcgggtcggacaccgttaacctcacggtc 261
||||||||||||| ||| ||| | |||||||| ||||| |||||||| | ||||||| ||
Sbjct: 502 aatagcttcctgaaagtaaagattgtgaactttgggtcagacaccgtgagcctcacgatc 561
Query: 262 tc 263
||
Sbjct: 562 tc 563
>gb|BJ291441.1|BJ291441 BJ291441 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl23d07 5', mRNA sequence
Length = 384
Score = 85.7 bits (43), Expect = 4e-015
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 28 acgtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctac 87
||||||||||| |||||||| ||||||||||||||||| || ||||| ||||| || |||
Sbjct: 107 acgtggaacccagacgctatcgtcttcaactcctggcagcaatatggaactcccagttac 166
Query: 88 tggatgcaga 97
||||||||||
Sbjct: 167 tggatgcaga 176
Score = 73.8 bits (37), Expect = 2e-011
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 161 gttcgctggccgcgtctgcgatcacgtggcaggatgcagagaatagcttcctgagagtga 220
|||||||||| || || |||||||||||||| |||| || || ||||||||||||||||
Sbjct: 240 gttcgctggcagcatccgcgatcacgtggcatgatgacgataacagcttcctgagagtga 299
Query: 221 aggtcgtgaacttcggg 237
|| | ||||||||||||
Sbjct: 300 agattgtgaacttcggg 316
>gb|AL820470.1|AL820470 AL820470 O:232 Triticum aestivum cDNA clone A02_O232_plate_12, mRNA
sequence
Length = 456
Score = 85.7 bits (43), Expect = 4e-015
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 28 acgtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctac 87
||||||||||| |||||||| ||||||||||||||||| || ||||| ||||| || |||
Sbjct: 131 acgtggaacccagacgctatcgtcttcaactcctggcagcaatatggaactcccagttac 190
Query: 88 tggatgcaga 97
||||||||||
Sbjct: 191 tggatgcaga 200
Score = 60.0 bits (30), Expect = 2e-007
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 282 cagcgtcaacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacga 341
|||| |||| ||||| ||||| |||||||| || ||||| ||||||| || ||||||||
Sbjct: 385 cagcatcaatgcgctcggatccaccgccactgttctcacatctggcagtgtaatggacga 444
Query: 342 gaactccttc 351
||||||||||
Sbjct: 445 gaactccttc 454
Score = 54.0 bits (27), Expect = 2e-005
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 180 gatcacgtggcaggatgcagagaatagcttcctgagagtgaaggtcgtgaactt 233
|||||||||||| ||| ||||| |||||||||||||| ||||| ||||||||
Sbjct: 283 gatcacgtggcatgatnacgagaacagcttcctgagagttaaggttgtgaactt 336
>gb|CA720919.1|CA720919 wkm2n.pk008.f20 wkm2n Triticum aestivum cDNA clone wkm2n.pk008.f20
5' end, mRNA sequence
Length = 493
Score = 85.7 bits (43), Expect = 4e-015
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 28 acgtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctac 87
||||||||||| |||||||| ||||||||||||||||| || ||||| ||||| || |||
Sbjct: 78 acgtggaacccagacgctatcgtcttcaactcctggcagcaatatggaactcccagttac 137
Query: 88 tggatgcaga 97
||||||||||
Sbjct: 138 tggatgcaga 147
>gb|CD914063.1|CD914063 G550.120H10F010712 G550 Triticum aestivum cDNA clone G550120H10,
mRNA sequence
Length = 627
Score = 85.7 bits (43), Expect = 4e-015
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 28 acgtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctac 87
||||||||||| |||||||| ||||||||||||||||| || ||||| ||||| || |||
Sbjct: 286 acgtggaacccagacgctatcgtcttcaactcctggcagcaatatggaactcccagttac 345
Query: 88 tggatgcaga 97
||||||||||
Sbjct: 346 tggatgcaga 355
Score = 73.8 bits (37), Expect = 2e-011
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 161 gttcgctggccgcgtctgcgatcacgtggcaggatgcagagaatagcttcctgagagtga 220
|||||||||| || || |||||||||||||| |||| || || ||||||||||||||||
Sbjct: 419 gttcgctggcagcatccgcgatcacgtggcatgatgacgataacagcttcctgagagtga 478
Query: 221 aggtcgtgaacttcggg 237
|| | ||||||||||||
Sbjct: 479 agattgtgaacttcggg 495
Score = 54.0 bits (27), Expect = 2e-005
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 282 cagcgtcaacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacga 341
|||| |||| ||||| ||||| |||| |||||| ||||| ||||||| || ||||||||
Sbjct: 540 cagcatcaatgcgctcggatccaccgacaccgtactcacatctggcagtgtaatggacga 599
Query: 342 gaactccttcagtaacccgaaca 364
|||||| ||| |||||| ||||
Sbjct: 600 gaactctttcgctaacccaaaca 622
>gb|CD924196.1|CD924196 G750.111P07F010705 G750 Triticum aestivum cDNA clone G750111P07,
mRNA sequence
Length = 496
Score = 85.7 bits (43), Expect = 4e-015
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 28 acgtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctac 87
||||||||||| |||||||| ||||||||||||||||| || ||||| ||||| || |||
Sbjct: 344 acgtggaacccagacgctatcgtcttcaactcctggcagcaatatggaactcccagttac 403
Query: 88 tggatgcaga 97
||||||||||
Sbjct: 404 tggatgcaga 413
>gb|CD926166.1|CD926166 G750.120I12F010711 G750 Triticum aestivum cDNA clone G750120I12,
mRNA sequence
Length = 496
Score = 85.7 bits (43), Expect = 4e-015
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 28 acgtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctac 87
||||||||||| |||||||| ||||||||||||||||| || ||||| ||||| || |||
Sbjct: 358 acgtggaacccagacgctatcgtcttcaactcctggcagcaatatgggactcccagttac 417
Query: 88 tggatgcaga 97
||||||||||
Sbjct: 418 tggatgcaga 427
>gb|CK193861.1|CK193861 FGAS002280 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 746
Score = 85.7 bits (43), Expect = 4e-015
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 28 acgtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctac 87
||||||||||| |||||||| ||||||||||||||||| || ||||| ||||| || |||
Sbjct: 379 acgtggaacccagacgctatcgtcttcaactcctggcagcaatatggaactcccagttac 438
Query: 88 tggatgcaga 97
||||||||||
Sbjct: 439 tggatgcaga 448
Score = 60.0 bits (30), Expect = 2e-007
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 180 gatcacgtggcaggatgcagagaatagcttcctgagagtgaaggtcgtgaactt 233
|||||||||||| |||| ||||| |||||||||||||| ||||| ||||||||
Sbjct: 531 gatcacgtggcatgatgacgagaacagcttcctgagagttaaggttgtgaactt 584
>gb|BJ250168.1|BJ250168 BJ250168 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf9h01 3', mRNA sequence
Length = 718
Score = 83.8 bits (42), Expect = 2e-014
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || || |||||||||||||||||||| ||||| |||||||| ||||||
Sbjct: 676 tggaacccagatgcgatagtcttcaactcctggcaacagtatggaactcctagttactgg 617
Query: 91 atgcagacnnttttc 105
|||||||| |||||
Sbjct: 616 atgcagacatttttc 602
>gb|CD891647.1|CD891647 G118.118A02F010724 G118 Triticum aestivum cDNA clone G118118A02,
mRNA sequence
Length = 581
Score = 83.8 bits (42), Expect = 2e-014
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || || |||||||||||||||||||| ||||| |||||||| ||||||
Sbjct: 219 tggaacccagatgcgatagtcttcaactcctggcaacagtatggaactcctagttactgg 278
Query: 91 atgcagacnnttttc 105
|||||||| |||||
Sbjct: 279 atgcagacatttttc 293
>gb|CD891670.1|CD891670 G118.118B01F010724 G118 Triticum aestivum cDNA clone G118118B01,
mRNA sequence
Length = 562
Score = 83.8 bits (42), Expect = 2e-014
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 31 tggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactgg 90
|||||||| || || || |||||||||||||||||||| ||||| |||||||| ||||||
Sbjct: 219 tggaacccagatgcgatagtcttcaactcctggcaacagtatggaactcctagttactgg 278
Query: 91 atgcagacnnttttc 105
|||||||| |||||
Sbjct: 279 atgcagacatttttc 293
>gb|CK207331.1|CK207331 FGAS018951 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1116
Score = 81.8 bits (41), Expect = 7e-014
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 30 gtggaacccggacgctattgtcttcaactcctggcaacactatggnactcctagctactg 89
||||||||| |||||||| ||||||||||||||||| || ||||| ||||| || |||||
Sbjct: 504 gtggaacccagacgctatcgtcttcaactcctggcagcaatatggaactcccagttactg 563
Query: 90 gatgcaga 97
||||||||
Sbjct: 564 gatgcaga 571
Score = 71.9 bits (36), Expect = 6e-011
Identities = 143/179 (79%)
Strand = Plus / Plus
Query: 282 cagcgtcaacgcgctgggatcaaccgccaccgtcctcacgtctggcaacgtcatggacga 341
|||| |||| ||||| ||||| |||| ||| || ||||| ||||||| || ||||||||
Sbjct: 756 cagcatcaatgcgctcggatccaccgncactgttctcacatctggcagtgtaatggacga 815
Query: 342 gaactccttcagtaacccgaacaaggttgcgccggtgaaaagccagctgagcaacgccgc 401
|||||||||| |||||| |||| ||||| |||||||| | | || || | |||||| |
Sbjct: 816 gaactccttcgctaacccaaacagggttgtgccggtgacgatcgagttgcgtaacgcctc 875
Query: 402 ggagcagatgcaggtcacgctggctcctcactccttcaccgccttcgatctggcgctgg 460
|||| ||||| |||| || ||| |||| ||||| ||| || ||||| ||||||||||
Sbjct: 876 ggaggagatggaggtgaccctgcctccccactctctcagtgcattcgacctggcgctgg 934
Score = 60.0 bits (30), Expect = 2e-007
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 180 gatcacgtggcaggatgcagagaatagcttcctgagagtgaaggtcgtgaactt 233
|||||||||||| |||| ||||| |||||||||||||| ||||| ||||||||
Sbjct: 654 gatcacgtggcatgatgacgagaacagcttcctgagagttaaggttgtgaactt 707
>gb|BJ275014.1|BJ275014 BJ275014 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh5l17 3', mRNA sequence
Length = 731
Score = 79.8 bits (40), Expect = 3e-013
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 49 gtcttcaactcctggcaacactatggnactcctagctactggatgcagacnnttttc 105
|||||||||||||||||||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 694 gtcttcaactcctggcaacagtatggaactcctagttactggatgcagacatttttc 638
>gb|BJ275300.1|BJ275300 BJ275300 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh6p07 3', mRNA sequence
Length = 706
Score = 79.8 bits (40), Expect = 3e-013
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 49 gtcttcaactcctggcaacactatggnactcctagctactggatgcagacnnttttc 105
|||||||||||||||||||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 669 gtcttcaactcctggcaacagtatggaactcctagttactggatgcagacatttttc 613
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 141,982
Number of Sequences: 636343
Number of extensions: 141982
Number of successful extensions: 35337
Number of sequences better than 0.5: 64
Number of HSP's better than 0.5 without gapping: 63
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 35189
Number of HSP's gapped (non-prelim): 126
length of query: 798
length of database: 367,240,239
effective HSP length: 19
effective length of query: 779
effective length of database: 355,149,722
effective search space: 276661633438
effective search space used: 276661633438
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)