BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161272.2.22
(333 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA621021.1|CA621021 wl1n.pk0070.h9 wl1n Triticum aestivu... 274 4e-072
gb|CA618016.1|CA618016 wl1n.pk0029.a2 wl1n Triticum aestivu... 244 3e-063
gb|CA625585.1|CA625585 wl1n.pk0143.f8 wl1n Triticum aestivu... 58 4e-007
gb|BJ292155.1|BJ292155 BJ292155 Y. Ogihara unpublished cDNA... 50 1e-004
gb|BJ298748.1|BJ298748 BJ298748 Y. Ogihara unpublished cDNA... 50 1e-004
gb|BQ839069.1|BQ839069 WHE3589_A05_B09ZS Wheat developing g... 50 1e-004
gb|CD904301.1|CD904301 G356.113B20F010920 G356 Triticum aes... 50 1e-004
gb|CD911938.1|CD911938 G550.112L03R010831 G550 Triticum aes... 50 1e-004
gb|CD913156.1|CD913156 G550.116P18F010525 G550 Triticum aes... 50 1e-004
gb|CD913157.1|CD913157 G550.116P18R010920 G550 Triticum aes... 50 1e-004
gb|CD916238.1|CD916238 G550.129N10R010921 G550 Triticum aes... 50 1e-004
gb|CD920412.1|CD920412 G608.117A02R011030 G608 Triticum aes... 50 1e-004
gb|CA594383.1|CA594383 wpa1c.pk006.h19 wpa1c Triticum aesti... 48 4e-004
gb|CD454581.1|CD454581 WHE2328_C01_F02ZT CS wheat pre-anthe... 48 4e-004
gb|CD879996.1|CD879996 AZO4.106P21R011122 AZO4 Triticum aes... 46 0.001
gb|BJ290741.1|BJ290741 BJ290741 Y. Ogihara unpublished cDNA... 42 0.023
gb|BJ297136.1|BJ297136 BJ297136 Y. Ogihara unpublished cDNA... 42 0.023
gb|BJ297348.1|BJ297348 BJ297348 Y. Ogihara unpublished cDNA... 42 0.023
gb|BQ244323.1|BQ244323 TaE15001G12F TaE15 Triticum aestivum... 42 0.023
gb|BQ247061.1|BQ247061 TaE15001G12R TaE15 Triticum aestivum... 42 0.023
gb|CA604682.1|CA604682 wr1.pk0043.g3 wr1 Triticum aestivum ... 42 0.023
gb|CA700827.1|CA700827 wkm1c.pk006.i10 wkm1c Triticum aesti... 42 0.023
gb|CD901202.1|CD901202 G356.103B15R011023 G356 Triticum aes... 42 0.023
gb|CD907429.1|CD907429 G468.106N24F010813 G468 Triticum aes... 42 0.023
gb|CD910014.1|CD910014 G468.114C14F010821 G468 Triticum aes... 42 0.023
gb|CD910642.1|CD910642 G550.001M19F010228 G550 Triticum aes... 42 0.023
gb|CD918514.1|CD918514 G608.109L21F010907 G608 Triticum aes... 42 0.023
gb|CD919103.1|CD919103 G608.112B14F010911 G608 Triticum aes... 42 0.023
gb|CD919997.1|CD919997 G608.115H03F010912 G608 Triticum aes... 42 0.023
gb|CD921053.1|CD921053 G608.119D23F010913 G608 Triticum aes... 42 0.023
gb|BE445079.1|BE445079 WHE1131_B08_D15ZS Wheat etiolated se... 40 0.092
gb|BF199673.1|BF199673 WHE0591-0594_I07_I07ZE Triticum mono... 40 0.092
gb|BF484605.1|BF484605 WHE2317_E08_I15ZS Wheat pre-anthesis... 40 0.092
gb|BG607934.1|BG607934 WHE2475_E05_I09ZS Triticum monococcu... 40 0.092
gb|BJ216051.1|BJ216051 BJ216051 Y. Ogihara unpublished cDNA... 40 0.092
gb|BJ275023.1|BJ275023 BJ275023 Y. Ogihara unpublished cDNA... 40 0.092
gb|BQ483400.1|BQ483400 WHE3508_B06_D12ZS Wheat unstressed r... 40 0.092
gb|BQ803865.1|BQ803865 WHE2843_A03_B05ZS Triticum monococcu... 40 0.092
gb|BU100454.1|BU100454 WHE3353_E04_J07ZS Chinese Spring alu... 40 0.092
gb|BU101199.1|BU101199 WHE3366_A06_B12ZS Chinese Spring alu... 40 0.092
gb|BJ214871.1|BJ214871 BJ214871 Y. Ogihara unpublished cDNA... 40 0.092
gb|BJ252204.1|BJ252204 BJ252204 Y. Ogihara unpublished cDNA... 40 0.092
gb|BJ266826.1|BJ266826 BJ266826 Y. Ogihara unpublished cDNA... 40 0.092
gb|BJ267012.1|BJ267012 BJ267012 Y. Ogihara unpublished cDNA... 40 0.092
gb|BJ272127.1|BJ272127 BJ272127 Y. Ogihara unpublished cDNA... 40 0.092
gb|BJ279176.1|BJ279176 BJ279176 Y. Ogihara unpublished cDNA... 40 0.092
gb|BJ284237.1|BJ284237 BJ284237 Y. Ogihara unpublished cDNA... 40 0.092
gb|BJ286347.1|BJ286347 BJ286347 Y. Ogihara unpublished cDNA... 40 0.092
gb|BJ311537.1|BJ311537 BJ311537 Y. Ogihara unpublished cDNA... 40 0.092
gb|CA614945.1|CA614945 wr1.pk178.g9 wr1 Triticum aestivum c... 40 0.092
gb|CA632472.1|CA632472 wle1n.pk0059.e1 wle1n Triticum aesti... 40 0.092
gb|CA638913.1|CA638913 wre1n.pk0018.a10 wre1n Triticum aest... 40 0.092
gb|CA652032.1|CA652032 wre1n.pk178.c1 wre1n Triticum aestiv... 40 0.092
gb|CA714922.1|CA714922 wdk3c.pk021.p8 wdk3c Triticum aestiv... 40 0.092
gb|CA722128.1|CA722128 wds1c.pk003.m6.f wds1c Triticum mono... 40 0.092
gb|CD373616.1|CD373616 WHE0435_H10_P19ZT CS wheat etiolated... 40 0.092
gb|CD492130.1|CD492130 WHE2475_E05_I09ZT Triticum monococcu... 40 0.092
gb|CD897157.1|CD897157 G174.104P23F010823 G174 Triticum aes... 40 0.092
gb|CD928111.1|CD928111 GR45.104A14F010322 GR45 Triticum aes... 40 0.092
gb|CD929827.1|CD929827 GR45.109E09R010612 GR45 Triticum aes... 40 0.092
gb|CD939143.1|CD939143 OV.112H11F010309 OV Triticum aestivu... 40 0.092
gb|CK153774.1|CK153774 FGAS032431 Triticum aestivum FGAS: T... 40 0.092
gb|CK200839.1|CK200839 FGAS009356 Triticum aestivum FGAS: L... 40 0.092
gb|CK208114.1|CK208114 FGAS019795 Triticum aestivum FGAS: L... 40 0.092
gb|CV780327.1|CV780327 FGAS074736 Triticum aestivum FGAS: L... 40 0.092
gb|DN828918.1|DN828918 KUCD01_02_D11_T3 WSWR cDNA library T... 40 0.092
gb|BT009232.1| Triticum aestivum clone wle1n.pk0102.g9:fis,... 40 0.092
gb|CD894683.1|CD894683 G118.126N14R011119 G118 Triticum aes... 38 0.36
gb|CD897190.1|CD897190 G174.105B18F010824 G174 Triticum aes... 38 0.36
gb|CD897191.1|CD897191 G174.105B18R011120 G174 Triticum aes... 38 0.36
gb|BE405358.1|BE405358 WHE1213_D11_G21ZS Wheat etiolated se... 36 1.4
gb|CL901763.1|CL901763 CSHC1138 1639HC library Triticum aes... 34 5.7
gb|BE403876.1|BE403876 WHE0420_F12_L24ZS Wheat etiolated se... 34 5.7
gb|BE517658.1|BE517658 WHE0801_D11_G21ZS Wheat vernalized c... 34 5.7
gb|BF484484.1|BF484484 WHE2324_A12_B24ZS Wheat pre-anthesis... 34 5.7
gb|BQ236957.1|BQ236957 TaE05024D09F TaE05 Triticum aestivum... 34 5.7
gb|BQ294974.1|BQ294974 WHE2856_H01_O02ZS Wheat unstressed r... 34 5.7
gb|AL820009.1|AL820009 AL820009 N:130 Triticum aestivum cDN... 34 5.7
gb|BQ744533.1|BQ744533 WHE4116_F11_L22ZS Wheat salt-stresse... 34 5.7
gb|BQ788890.1|BQ788890 WHE4155_A05_A09ZS Wheat CS whole pla... 34 5.7
gb|BJ214739.1|BJ214739 BJ214739 Y. Ogihara unpublished cDNA... 34 5.7
gb|BJ220753.1|BJ220753 BJ220753 Y. Ogihara unpublished cDNA... 34 5.7
gb|BJ226586.1|BJ226586 BJ226586 Y. Ogihara unpublished cDNA... 34 5.7
gb|BJ231504.1|BJ231504 BJ231504 Y. Ogihara unpublished cDNA... 34 5.7
gb|BJ263672.1|BJ263672 BJ263672 Y. Ogihara unpublished cDNA... 34 5.7
gb|BJ266897.1|BJ266897 BJ266897 Y. Ogihara unpublished cDNA... 34 5.7
gb|BJ268201.1|BJ268201 BJ268201 Y. Ogihara unpublished cDNA... 34 5.7
gb|BJ270585.1|BJ270585 BJ270585 Y. Ogihara unpublished cDNA... 34 5.7
gb|BJ273125.1|BJ273125 BJ273125 Y. Ogihara unpublished cDNA... 34 5.7
gb|BJ279771.1|BJ279771 BJ279771 Y. Ogihara unpublished cDNA... 34 5.7
gb|BJ284969.1|BJ284969 BJ284969 Y. Ogihara unpublished cDNA... 34 5.7
gb|CA606347.1|CA606347 wr1.pk0066.c10 wr1 Triticum aestivum... 34 5.7
gb|CA650165.1|CA650165 wre1n.pk0143.g10 wre1n Triticum aest... 34 5.7
gb|CA693087.1|CA693087 wlm96.pk061.e20 wlm96 Triticum aesti... 34 5.7
gb|CA722009.1|CA722009 wds1c.pk001.l4.f wds1c Triticum mono... 34 5.7
gb|CD886481.1|CD886481 G118.102G19F010601 G118 Triticum aes... 34 5.7
gb|CD892201.1|CD892201 G118.120E02F010725 G118 Triticum aes... 34 5.7
gb|CD892202.1|CD892202 G118.120E02R010926 G118 Triticum aes... 34 5.7
gb|CD898775.1|CD898775 G174.110A08F010822 G174 Triticum aes... 34 5.7
gb|CK168085.1|CK168085 FGAS052573 Triticum aestivum FGAS: T... 34 5.7
gb|BJ304478.2|BJ304478 BJ304478 Y. Ogihara unpublished cDNA... 34 5.7
>gb|CA621021.1|CA621021 wl1n.pk0070.h9 wl1n Triticum aestivum cDNA clone wl1n.pk0070.h9 5'
end, mRNA sequence
Length = 588
Score = 274 bits (138), Expect = 4e-072
Identities = 200/213 (93%), Gaps = 7/213 (3%)
Strand = Plus / Plus
Query: 1 cttgggatcaaatgtgcaaggctacttcgcttggtctctgctgg-acaactttgaatggt 59
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 268 cttgggatnaaatgtgcaaggctacttcgcttggtctctgctgggacaactttgaatggt 327
Query: 60 ttgccggcttcaccgaacgttatggcattgtctacgtcgaccgcaacaataactgcacgc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttgccggcttcaccgaacgttatggcattgtctacgtcgaccgcaacaataactgcacgc 387
Query: 120 gctacatgaaggagtctgccaagtggttgaaagagttcaacaccgcgaaaaagcccagca 179
||||||||||||| ||| |||||||| | |||||| | ||||||||||||||||||| ||
Sbjct: 388 gctacatgaagga-tct-ccaagtgggtnaaagag-tnaacaccgcgaaaaagcccanca 444
Query: 180 a-gaagattcttacgccagcttaaaaatcgggg 211
| ||||| |||||| |||||||||||||||||
Sbjct: 445 atgaaga-tcttac-ncagcttaaaaatcgggg 475
>gb|CA618016.1|CA618016 wl1n.pk0029.a2 wl1n Triticum aestivum cDNA clone wl1n.pk0029.a2 5'
end, mRNA sequence
Length = 559
Score = 244 bits (123), Expect = 3e-063
Identities = 165/171 (96%), Gaps = 6/171 (3%)
Strand = Plus / Plus
Query: 1 cttgggatcaaatgtgcaaggctacttcgcttggtctctgctggacaactttgaatggtt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 229 cttgggatcaaatgtgcaaggctacttcgcttggtctctgctggacaactttgaatgg-t 287
Query: 61 tgccggcttcaccgaacgttatggcattgtctacgtcgaccgcaacaataactgcacgcg 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 288 tgccggcttcaccgaacgttatgg-attgtctacgtcgaccgcaacaataactgcacgcg 346
Query: 121 ctacatgaaggagtctgccaagtggttgaaagagttcaacaccgcgaaaaa 171
|||||||||||| |||||||| ||| ||||||| |||||||||||||||||
Sbjct: 347 ctacatgaagga-tctgccaa-tgg-tgaaaga-ttcaacaccgcgaaaaa 393
>gb|CA625585.1|CA625585 wl1n.pk0143.f8 wl1n Triticum aestivum cDNA clone wl1n.pk0143.f8 5'
end, mRNA sequence
Length = 550
Score = 58.0 bits (29), Expect = 4e-007
Identities = 71/81 (87%), Gaps = 4/81 (4%)
Strand = Plus / Plus
Query: 4 gggatcaaatgtgcaaggctacttcgcttggtctctgctggacaactttgaatggtttgc 63
|||||||||||||||| | |||||||||||| | | |||||||||| |||||||| ||||
Sbjct: 462 gggatcaaatgtgcaangntacttcgcttggnc-ccgctggacaac-ttgaatgg-ttgc 518
Query: 64 cggcttcaccgaacgttatgg 84
|||| | | ||||||||||||
Sbjct: 519 cggc-tnaacgaacgttatgg 538
>gb|BJ292155.1|BJ292155 BJ292155 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl26j14 5', mRNA sequence
Length = 326
Score = 50.1 bits (25), Expect = 1e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctctgctggacaactt 51
|||||||||||||||||||| ||||||||
Sbjct: 14 tacttcgcttggtctctgcttgacaactt 42
>gb|BJ298748.1|BJ298748 BJ298748 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl26j14 3', mRNA sequence
Length = 274
Score = 50.1 bits (25), Expect = 1e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctctgctggacaactt 51
|||||||||||||||||||| ||||||||
Sbjct: 272 tacttcgcttggtctctgcttgacaactt 244
>gb|BQ839069.1|BQ839069 WHE3589_A05_B09ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3589_A05_B09, mRNA sequence
Length = 732
Score = 50.1 bits (25), Expect = 1e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctctgctggacaactt 51
|||||||||||||||||||| ||||||||
Sbjct: 596 tacttcgcttggtctctgcttgacaactt 624
>gb|CD904301.1|CD904301 G356.113B20F010920 G356 Triticum aestivum cDNA clone G356113B20,
mRNA sequence
Length = 723
Score = 50.1 bits (25), Expect = 1e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctctgctggacaactt 51
|||||||||||||||||||| ||||||||
Sbjct: 458 tacttcgcttggtctctgcttgacaactt 486
>gb|CD911938.1|CD911938 G550.112L03R010831 G550 Triticum aestivum cDNA clone G550112L03,
mRNA sequence
Length = 584
Score = 50.1 bits (25), Expect = 1e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctctgctggacaactt 51
|||||||||||||||||||| ||||||||
Sbjct: 297 tacttcgcttggtctctgcttgacaactt 269
>gb|CD913156.1|CD913156 G550.116P18F010525 G550 Triticum aestivum cDNA clone G550116P18,
mRNA sequence
Length = 593
Score = 50.1 bits (25), Expect = 1e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctctgctggacaactt 51
|||||||||||||||||||| ||||||||
Sbjct: 355 tacttcgcttggtctctgcttgacaactt 383
>gb|CD913157.1|CD913157 G550.116P18R010920 G550 Triticum aestivum cDNA clone G550116P18,
mRNA sequence
Length = 554
Score = 50.1 bits (25), Expect = 1e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctctgctggacaactt 51
|||||||||||||||||||| ||||||||
Sbjct: 282 tacttcgcttggtctctgcttgacaactt 254
>gb|CD916238.1|CD916238 G550.129N10R010921 G550 Triticum aestivum cDNA clone G550129N10,
mRNA sequence
Length = 713
Score = 50.1 bits (25), Expect = 1e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctctgctggacaactt 51
|||||||||||||||||||| ||||||||
Sbjct: 298 tacttcgcttggtctctgcttgacaactt 270
>gb|CD920412.1|CD920412 G608.117A02R011030 G608 Triticum aestivum cDNA clone G608117A02,
mRNA sequence
Length = 625
Score = 50.1 bits (25), Expect = 1e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctctgctggacaactt 51
|||||||||||||||||||| ||||||||
Sbjct: 302 tacttcgcttggtctctgcttgacaactt 274
>gb|CA594383.1|CA594383 wpa1c.pk006.h19 wpa1c Triticum aestivum cDNA clone wpa1c.pk006.h19
5' end, mRNA sequence
Length = 527
Score = 48.1 bits (24), Expect = 4e-004
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| ||||| ||||||||||||||
Sbjct: 276 ggctacttcgcatggtcgctgctggacaactt 307
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 89 gtctacgtcgaccgcaa 105
|||||||||||||||||
Sbjct: 345 gtctacgtcgaccgcaa 361
>gb|CD454581.1|CD454581 WHE2328_C01_F02ZT CS wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2328_C01_F02, mRNA sequence
Length = 636
Score = 48.1 bits (24), Expect = 4e-004
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| ||||| ||||||||||||||
Sbjct: 349 ggctacttcgcatggtcgctgctggacaactt 318
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 89 gtctacgtcgaccgcaa 105
|||||||||||||||||
Sbjct: 280 gtctacgtcgaccgcaa 264
>gb|CD879996.1|CD879996 AZO4.106P21R011122 AZO4 Triticum aestivum cDNA clone AZO4106P21,
mRNA sequence
Length = 530
Score = 46.1 bits (23), Expect = 0.001
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 20 ggctacttcgcttggtctctgctggacaact 50
||||||||||| ||||| |||||||||||||
Sbjct: 387 ggctacttcgcgtggtcgctgctggacaact 357
>gb|BJ290741.1|BJ290741 BJ290741 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl20b06 5', mRNA sequence
Length = 692
Score = 42.1 bits (21), Expect = 0.023
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctctgctggacaactt 51
||||| |||||||||||||| ||||||||
Sbjct: 590 tactttgcttggtctctgcttgacaactt 618
>gb|BJ297136.1|BJ297136 BJ297136 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl19e07 3', mRNA sequence
Length = 652
Score = 42.1 bits (21), Expect = 0.023
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctctgctggacaactt 51
||||| |||||||||||||| ||||||||
Sbjct: 269 tactttgcttggtctctgcttgacaactt 241
>gb|BJ297348.1|BJ297348 BJ297348 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl20b06 3', mRNA sequence
Length = 727
Score = 42.1 bits (21), Expect = 0.023
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctctgctggacaactt 51
||||| |||||||||||||| ||||||||
Sbjct: 276 tactttgcttggtctctgcttgacaactt 248
>gb|BQ244323.1|BQ244323 TaE15001G12F TaE15 Triticum aestivum cDNA clone TaE15001G12F, mRNA
sequence
Length = 618
Score = 42.1 bits (21), Expect = 0.023
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctctgctggacaactt 51
||||| |||||||||||||| ||||||||
Sbjct: 305 tactttgcttggtctctgcttgacaactt 277
>gb|BQ247061.1|BQ247061 TaE15001G12R TaE15 Triticum aestivum cDNA clone TaE15001G12R, mRNA
sequence
Length = 621
Score = 42.1 bits (21), Expect = 0.023
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctctgctggacaactt 51
||||| |||||||||||||| ||||||||
Sbjct: 314 tactttgcttggtctctgcttgacaactt 342
>gb|CA604682.1|CA604682 wr1.pk0043.g3 wr1 Triticum aestivum cDNA clone wr1.pk0043.g3 5'
end, mRNA sequence
Length = 386
Score = 42.1 bits (21), Expect = 0.023
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctctgctggacaactt 51
||||| |||||||||||||| ||||||||
Sbjct: 29 tactttgcttggtctctgcttgacaactt 57
>gb|CA700827.1|CA700827 wkm1c.pk006.i10 wkm1c Triticum aestivum cDNA clone wkm1c.pk006.i10
5' end, mRNA sequence
Length = 533
Score = 42.1 bits (21), Expect = 0.023
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctctgctggacaactt 51
||||| |||||||||||||| ||||||||
Sbjct: 274 tactttgcttggtctctgcttgacaactt 302
>gb|CD901202.1|CD901202 G356.103B15R011023 G356 Triticum aestivum cDNA clone G356103B15,
mRNA sequence
Length = 718
Score = 42.1 bits (21), Expect = 0.023
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctctgctggacaactt 51
||||| |||||||||||||| ||||||||
Sbjct: 323 tactttgcttggtctctgcttgacaactt 295
>gb|CD907429.1|CD907429 G468.106N24F010813 G468 Triticum aestivum cDNA clone G468106N24,
mRNA sequence
Length = 432
Score = 42.1 bits (21), Expect = 0.023
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctctgctggacaactt 51
||||| |||||||||||||| ||||||||
Sbjct: 131 tactttgcttggtctctgcttgacaactt 159
>gb|CD910014.1|CD910014 G468.114C14F010821 G468 Triticum aestivum cDNA clone G468114C14,
mRNA sequence
Length = 670
Score = 42.1 bits (21), Expect = 0.023
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctctgctggacaactt 51
||||| |||||||||||||| ||||||||
Sbjct: 459 tactttgcttggtctctgcttgacaactt 487
>gb|CD910642.1|CD910642 G550.001M19F010228 G550 Triticum aestivum cDNA clone G550001M19,
mRNA sequence
Length = 637
Score = 42.1 bits (21), Expect = 0.023
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctctgctggacaactt 51
||||| |||||||||||||| ||||||||
Sbjct: 352 tactttgcttggtctctgcttgacaactt 380
>gb|CD918514.1|CD918514 G608.109L21F010907 G608 Triticum aestivum cDNA clone G608109L21,
mRNA sequence
Length = 599
Score = 42.1 bits (21), Expect = 0.023
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctctgctggacaactt 51
||||| |||||||||||||| ||||||||
Sbjct: 372 tactttgcttggtctctgcttgacaactt 400
>gb|CD919103.1|CD919103 G608.112B14F010911 G608 Triticum aestivum cDNA clone G608112B14,
mRNA sequence
Length = 343
Score = 42.1 bits (21), Expect = 0.023
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctctgctggacaactt 51
||||||||| |||||| ||||||||||||
Sbjct: 46 tacttcgctgggtctcggctggacaactt 74
>gb|CD919997.1|CD919997 G608.115H03F010912 G608 Triticum aestivum cDNA clone G608115H03,
mRNA sequence
Length = 675
Score = 42.1 bits (21), Expect = 0.023
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctctgctggacaactt 51
||||| |||||||||||||| ||||||||
Sbjct: 409 tactttgcttggtctctgcttgacaactt 437
>gb|CD921053.1|CD921053 G608.119D23F010913 G608 Triticum aestivum cDNA clone G608119D23,
mRNA sequence
Length = 574
Score = 42.1 bits (21), Expect = 0.023
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctctgctggacaactt 51
||||| |||||||||||||| ||||||||
Sbjct: 291 tactttgcttggtctctgcttgacaactt 319
>gb|BE445079.1|BE445079 WHE1131_B08_D15ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1131_B08_D15,
mRNA sequence
Length = 509
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 412 ggctacttcgcgtggtctctcctcgacaactt 443
>gb|BF199673.1|BF199673 WHE0591-0594_I07_I07ZE Triticum monococcum vegetative apex cDNA
library Triticum monococcum cDNA clone
WHE0591-0594_I07_I07, mRNA sequence
Length = 452
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 233 ggctacttcgcgtggtctctcctcgacaactt 264
>gb|BF484605.1|BF484605 WHE2317_E08_I15ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2317_E08_I15, mRNA sequence
Length = 532
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 189 ggctacttcgcgtggtctctcctcgacaactt 220
>gb|BG607934.1|BG607934 WHE2475_E05_I09ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2475_E05_I09,
mRNA sequence
Length = 707
Score = 40.1 bits (20), Expect = 0.092
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctctgctggacaact 50
|||||||| ||||||||||| |||||||
Sbjct: 507 tacttcgcgtggtctctgctagacaact 534
>gb|BJ216051.1|BJ216051 BJ216051 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh9l07 3', mRNA sequence
Length = 586
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 193 ggctacttcgcgtggtctctcctcgacaactt 162
>gb|BJ275023.1|BJ275023 BJ275023 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh5m05 3', mRNA sequence
Length = 720
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 250 ggctacttcgcgtggtctctcctcgacaactt 219
>gb|BQ483400.1|BQ483400 WHE3508_B06_D12ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3508_B06_D12, mRNA sequence
Length = 717
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 501 ggctacttcgcgtggtctctcctcgacaactt 532
>gb|BQ803865.1|BQ803865 WHE2843_A03_B05ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2843_A03_B05, mRNA
sequence
Length = 510
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 341 ggctacttcgcgtggtctctcctcgacaactt 372
>gb|BU100454.1|BU100454 WHE3353_E04_J07ZS Chinese Spring aluminum-stressed root tip cDNA
library Triticum aestivum cDNA clone WHE3353_E04_J07,
mRNA sequence
Length = 731
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 605 ggctacttcgcgtggtctctcctcgacaactt 636
>gb|BU101199.1|BU101199 WHE3366_A06_B12ZS Chinese Spring aluminum-stressed root tip cDNA
library Triticum aestivum cDNA clone WHE3366_A06_B12,
mRNA sequence
Length = 416
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 86 ggctacttcgcgtggtctctcctcgacaactt 117
>gb|BJ214871.1|BJ214871 BJ214871 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh4h17 3', mRNA sequence
Length = 694
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 318 ggctacttcgcgtggtctctcctcgacaactt 287
>gb|BJ252204.1|BJ252204 BJ252204 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf22d13 3', mRNA sequence
Length = 605
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 269 ggctacttcgcgtggtctctcctcgacaactt 238
>gb|BJ266826.1|BJ266826 BJ266826 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh2e01 5', mRNA sequence
Length = 450
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 115 ggctacttcgcgtggtctctcctcgacaactt 146
>gb|BJ267012.1|BJ267012 BJ267012 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh3e01 5', mRNA sequence
Length = 401
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 135 ggctacttcgcgtggtctctcctcgacaactt 166
>gb|BJ272127.1|BJ272127 BJ272127 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh3e01 3', mRNA sequence
Length = 438
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 316 ggctacttcgcgtggtctctcctcgacaactt 285
>gb|BJ279176.1|BJ279176 BJ279176 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr1k03 5', mRNA sequence
Length = 533
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 343 ggctacttcgcgtggtctctcctcgacaactt 374
>gb|BJ284237.1|BJ284237 BJ284237 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr1k03 3', mRNA sequence
Length = 592
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 235 ggctacttcgcgtggtctctcctcgacaactt 204
>gb|BJ286347.1|BJ286347 BJ286347 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr21f09 3', mRNA sequence
Length = 747
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 276 ggctacttcgcgtggtctctcctcgacaactt 245
>gb|BJ311537.1|BJ311537 BJ311537 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd28e11 3', mRNA sequence
Length = 610
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 232 ggctacttcgcgtggtctctcctcgacaactt 201
>gb|CA614945.1|CA614945 wr1.pk178.g9 wr1 Triticum aestivum cDNA clone wr1.pk178.g9 5' end,
mRNA sequence
Length = 493
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 340 ggctacttcgcgtggtctctcctcgacaactt 371
>gb|CA632472.1|CA632472 wle1n.pk0059.e1 wle1n Triticum aestivum cDNA clone wle1n.pk0059.e1
5' end, mRNA sequence
Length = 363
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 72 ggctacttcgcgtggtctctcctcgacaactt 103
>gb|CA638913.1|CA638913 wre1n.pk0018.a10 wre1n Triticum aestivum cDNA clone
wre1n.pk0018.a10 5' end, mRNA sequence
Length = 541
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 266 ggctacttcgcgtggtctctcctcgacaactt 235
>gb|CA652032.1|CA652032 wre1n.pk178.c1 wre1n Triticum aestivum cDNA clone wre1n.pk178.c1
5' end, mRNA sequence
Length = 326
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 66 ggctacttcgcgtggtctctcctcgacaactt 97
>gb|CA714922.1|CA714922 wdk3c.pk021.p8 wdk3c Triticum aestivum cDNA clone wdk3c.pk021.p8 5'
end, mRNA sequence
Length = 413
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 226 ggctacttcgcgtggtctctcctcgacaactt 257
>gb|CA722128.1|CA722128 wds1c.pk003.m6.f wds1c Triticum monococcum cDNA clone
wds1c.pk003.m6.f 3' end, mRNA sequence
Length = 549
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 373 ggctacttcgcgtggtctctcctcgacaactt 342
>gb|CD373616.1|CD373616 WHE0435_H10_P19ZT CS wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0435_H10_P19, mRNA
sequence
Length = 729
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 358 ggctacttcgcgtggtctctcctcgacaactt 327
>gb|CD492130.1|CD492130 WHE2475_E05_I09ZT Triticum monococcum DV92 early reproductive apex
cDNA library Triticum monococcum cDNA clone
WHE2475_E05_I09, mRNA sequence
Length = 694
Score = 40.1 bits (20), Expect = 0.092
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctctgctggacaact 50
|||||||| ||||||||||| |||||||
Sbjct: 377 tacttcgcgtggtctctgctagacaact 350
>gb|CD897157.1|CD897157 G174.104P23F010823 G174 Triticum aestivum cDNA clone G174104P23,
mRNA sequence
Length = 636
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 558 ggctacttcgcgtggtctctcctcgacaactt 589
>gb|CD928111.1|CD928111 GR45.104A14F010322 GR45 Triticum aestivum cDNA clone GR45104A14,
mRNA sequence
Length = 425
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 165 ggctacttcgcgtggtctctcctcgacaactt 196
>gb|CD929827.1|CD929827 GR45.109E09R010612 GR45 Triticum aestivum cDNA clone GR45109E09,
mRNA sequence
Length = 558
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 333 ggctacttcgcgtggtctctcctcgacaactt 302
>gb|CD939143.1|CD939143 OV.112H11F010309 OV Triticum aestivum cDNA clone OV112H11, mRNA
sequence
Length = 512
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 238 ggctacttcgcgtggtctctcctcgacaactt 269
>gb|CK153774.1|CK153774 FGAS032431 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 894
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 359 ggctacttcgcgtggtctctcctcgacaactt 390
>gb|CK200839.1|CK200839 FGAS009356 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 850
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 433 ggctacttcgcgtggtctctcctcgacaactt 402
>gb|CK208114.1|CK208114 FGAS019795 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1105
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 334 ggctacttcgcgtggtctctcctcgacaactt 303
>gb|CV780327.1|CV780327 FGAS074736 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 846
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 334 ggctacttcgcgtggtctctcctcgacaactt 365
>gb|DN828918.1|DN828918 KUCD01_02_D11_T3 WSWR cDNA library Triticum aestivum cDNA, mRNA
sequence
Length = 727
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 358 ggctacttcgcgtggtctctcctcgacaactt 327
>gb|BT009232.1| Triticum aestivum clone wle1n.pk0102.g9:fis, full insert mRNA
sequence
Length = 1023
Score = 40.1 bits (20), Expect = 0.092
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaactt 51
||||||||||| |||||||| || ||||||||
Sbjct: 731 ggctacttcgcgtggtctctcctcgacaactt 762
>gb|CD894683.1|CD894683 G118.126N14R011119 G118 Triticum aestivum cDNA clone G118126N14,
mRNA sequence
Length = 595
Score = 38.2 bits (19), Expect = 0.36
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 20 ggctacttcgcttggtctctgctggacaact 50
|||||||||| ||||| |||||||||||||
Sbjct: 382 ggctacttcgtgtggtcgctgctggacaact 352
>gb|CD897190.1|CD897190 G174.105B18F010824 G174 Triticum aestivum cDNA clone G174105B18,
mRNA sequence
Length = 554
Score = 38.2 bits (19), Expect = 0.36
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 20 ggctacttcgcttggtctctgctggacaact 50
|||||||||| ||||| |||||||||||||
Sbjct: 445 ggctacttcgtgtggtcgctgctggacaact 475
>gb|CD897191.1|CD897191 G174.105B18R011120 G174 Triticum aestivum cDNA clone G174105B18,
mRNA sequence
Length = 763
Score = 38.2 bits (19), Expect = 0.36
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 20 ggctacttcgcttggtctctgctggacaact 50
|||||||||| ||||| |||||||||||||
Sbjct: 353 ggctacttcgtgtggtcgctgctggacaact 323
>gb|BE405358.1|BE405358 WHE1213_D11_G21ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1213_D11_G21, mRNA
sequence
Length = 604
Score = 36.2 bits (18), Expect = 1.4
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 90 tctacgtcgaccgcaaca 107
||||||||||||||||||
Sbjct: 440 tctacgtcgaccgcaaca 457
>gb|CL901763.1|CL901763 CSHC1138 1639HC library Triticum aestivum genomic clone
1639HC06B20, DNA sequence
Length = 441
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 142 gtggttgaaagagttca 158
|||||||||||||||||
Sbjct: 235 gtggttgaaagagttca 251
>gb|BE403876.1|BE403876 WHE0420_F12_L24ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0420_F12_L24, mRNA
sequence
Length = 590
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 106 tacttcgcttggtctct 90
>gb|BE517658.1|BE517658 WHE0801_D11_G21ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0801_D11_G21, mRNA sequence
Length = 536
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 207 tacttcgcttggtctct 191
>gb|BF484484.1|BF484484 WHE2324_A12_B24ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2324_A12_B24, mRNA sequence
Length = 562
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 96 tacttcgcttggtctct 80
>gb|BQ236957.1|BQ236957 TaE05024D09F TaE05 Triticum aestivum cDNA clone TaE05024D09F, mRNA
sequence
Length = 402
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 198 cttaaaaatcgggggcc 214
|||||||||||||||||
Sbjct: 127 cttaaaaatcgggggcc 143
>gb|BQ294974.1|BQ294974 WHE2856_H01_O02ZS Wheat unstressed root tip cDNA library Triticum
aestivum cDNA clone WHE2856_H01_O02, mRNA sequence
Length = 639
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 278 tacttcgcttggtctct 262
>gb|AL820009.1|AL820009 AL820009 N:130 Triticum aestivum cDNA clone E10_N130_plate_1, mRNA
sequence
Length = 642
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 325 tacttcgcttggtctct 309
>gb|BQ744533.1|BQ744533 WHE4116_F11_L22ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4116_F11_L22, mRNA sequence
Length = 794
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 437 tacttcgcttggtctct 421
>gb|BQ788890.1|BQ788890 WHE4155_A05_A09ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4155_A05_A09, mRNA sequence
Length = 707
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 149 aaagagttcaacaccgc 165
|||||||||||||||||
Sbjct: 68 aaagagttcaacaccgc 84
>gb|BJ214739.1|BJ214739 BJ214739 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh3o01 3', mRNA sequence
Length = 724
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 658 tacttcgcttggtctct 674
>gb|BJ220753.1|BJ220753 BJ220753 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh21j09 3', mRNA sequence
Length = 740
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 724 tacttcgcttggtctct 740
>gb|BJ226586.1|BJ226586 BJ226586 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl18b15 5', mRNA sequence
Length = 697
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 138 tacttcgcttggtctct 122
>gb|BJ231504.1|BJ231504 BJ231504 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl18b15 3', mRNA sequence
Length = 660
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 639 tacttcgcttggtctct 655
>gb|BJ263672.1|BJ263672 BJ263672 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh5k18 3', mRNA sequence
Length = 669
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 648 tacttcgcttggtctct 664
>gb|BJ266897.1|BJ266897 BJ266897 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh2k07 5', mRNA sequence
Length = 457
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 152 tacttcgcttggtctct 136
>gb|BJ268201.1|BJ268201 BJ268201 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh15l01 5', mRNA sequence
Length = 596
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 115 tacttcgcttggtctct 99
>gb|BJ270585.1|BJ270585 BJ270585 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh8i10 5', mRNA sequence
Length = 579
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 115 tacttcgcttggtctct 99
>gb|BJ273125.1|BJ273125 BJ273125 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh15l01 3', mRNA sequence
Length = 678
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 657 tacttcgcttggtctct 673
>gb|BJ279771.1|BJ279771 BJ279771 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr4k14 5', mRNA sequence
Length = 682
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 218 tacttcgcttggtctct 202
>gb|BJ284969.1|BJ284969 BJ284969 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr6a21 3', mRNA sequence
Length = 678
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 657 tacttcgcttggtctct 673
>gb|CA606347.1|CA606347 wr1.pk0066.c10 wr1 Triticum aestivum cDNA clone wr1.pk0066.c10 5'
end, mRNA sequence
Length = 612
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 152 tacttcgcttggtctct 136
>gb|CA650165.1|CA650165 wre1n.pk0143.g10 wre1n Triticum aestivum cDNA clone
wre1n.pk0143.g10 5' end, mRNA sequence
Length = 387
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 152 tacttcgcttggtctct 136
>gb|CA693087.1|CA693087 wlm96.pk061.e20 wlm96 Triticum aestivum cDNA clone
wlm96.pk061.e20 5' end, mRNA sequence
Length = 343
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 49 tacttcgcttggtctct 33
>gb|CA722009.1|CA722009 wds1c.pk001.l4.f wds1c Triticum monococcum cDNA clone
wds1c.pk001.l4.f 3' end, mRNA sequence
Length = 596
Score = 34.2 bits (17), Expect = 5.7
Identities = 26/29 (89%)
Strand = Plus / Minus
Query: 20 ggctacttcgcttggtctctgctggacaa 48
||||||||||| |||||||| || |||||
Sbjct: 321 ggctacttcgcgtggtctctcctcgacaa 293
>gb|CD886481.1|CD886481 G118.102G19F010601 G118 Triticum aestivum cDNA clone G118102G19,
mRNA sequence
Length = 647
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 536 tacttcgcttggtctct 520
>gb|CD892201.1|CD892201 G118.120E02F010725 G118 Triticum aestivum cDNA clone G118120E02,
mRNA sequence
Length = 453
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 179 tacttcgcttggtctct 163
>gb|CD892202.1|CD892202 G118.120E02R010926 G118 Triticum aestivum cDNA clone G118120E02,
mRNA sequence
Length = 727
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 670 tacttcgcttggtctct 686
>gb|CD898775.1|CD898775 G174.110A08F010822 G174 Triticum aestivum cDNA clone G174110A08,
mRNA sequence
Length = 689
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 96 tacttcgcttggtctct 80
>gb|CK168085.1|CK168085 FGAS052573 Triticum aestivum FGAS: TaLt7 Triticum aestivum cDNA,
mRNA sequence
Length = 1163
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 757 tacttcgcttggtctct 773
>gb|BJ304478.2|BJ304478 BJ304478 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd9e11 5', mRNA sequence
Length = 605
Score = 34.2 bits (17), Expect = 5.7
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 23 tacttcgcttggtctct 39
|||||||||||||||||
Sbjct: 435 tacttcgcttggtctct 419
Database: Triticum_nucl_with_EST.fasta
Posted date: May 2, 2006 3:43 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 37,583
Number of Sequences: 636343
Number of extensions: 37583
Number of successful extensions: 9287
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9156
Number of HSP's gapped (non-prelim): 123
length of query: 333
length of database: 367,240,239
effective HSP length: 19
effective length of query: 314
effective length of database: 355,149,722
effective search space: 111517012708
effective search space used: 111517012708
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)