BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804908.2.1
(1118 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD490941.1|CD490941 WHE3008_H06_P12ZT Wheat etiolated se... 363 2e-098
gb|CA625704.1|CA625704 wl1n.pk0133.c11 wl1n Triticum aestiv... 295 3e-078
gb|BQ806804.1|BQ806804 WHE3583_E09_I17ZS Wheat developing g... 212 4e-053
gb|AJ614597.1|AJ614597 AJ614597 Triticum turgidum subsp. du... 212 4e-053
gb|BJ243948.1|BJ243948 BJ243948 Y. Ogihara unpublished cDNA... 176 2e-042
gb|CK195913.1|CK195913 FGAS004359 Triticum aestivum FGAS: L... 131 1e-028
gb|BE404125.1|BE404125 WHE1201_E08_I15ZS Wheat etiolated se... 125 7e-027
gb|BE444241.1|BE444241 WHE1128_H03_P06ZS Wheat etiolated se... 103 3e-020
gb|BE444242.1|BE444242 WHE1128_H04_P08ZS Wheat etiolated se... 103 3e-020
gb|BE444737.1|BE444737 WHE1138_G04_M08ZS Wheat etiolated se... 103 3e-020
gb|CA644199.1|CA644199 wre1n.pk0078.d5 wre1n Triticum aesti... 94 2e-017
gb|CK206523.1|CK206523 FGAS018120 Triticum aestivum FGAS: L... 92 1e-016
gb|BJ285932.1|BJ285932 BJ285932 Y. Ogihara unpublished cDNA... 88 2e-015
gb|CD373656.1|CD373656 WHE1201_E08_I15ZT CS wheat etiolated... 88 2e-015
gb|CD933933.1|CD933933 GR45.122H21F010721 GR45 Triticum aes... 88 2e-015
gb|CK169970.1|CK169970 FGAS044670 Triticum aestivum FGAS: T... 88 2e-015
gb|CA625452.1|CA625452 wl1n.pk0139.g4 wl1n Triticum aestivu... 84 2e-014
gb|CA625465.1|CA625465 wl1n.pk0139.f3 wl1n Triticum aestivu... 84 2e-014
gb|CK152799.1|CK152799 FGAS035875 Triticum aestivum FGAS: T... 74 2e-011
gb|BE404667.1|BE404667 WHE0445_H11_O21ZS Wheat etiolated se... 56 5e-006
gb|BF473283.1|BF473283 WHE0926_F12_K24ZS Wheat 5-15 DAP spi... 56 5e-006
gb|BF483316.1|BF483316 WHE1791_D05_G09ZS Wheat pre-anthesis... 56 5e-006
gb|BM138675.1|BM138675 WHE0496_E09_I18ZS Wheat Fusarium gra... 56 5e-006
gb|BJ207110.1|BJ207110 BJ207110 Y. Ogihara unpublished cDNA... 56 5e-006
gb|BJ208051.1|BJ208051 BJ208051 Y. Ogihara unpublished cDNA... 56 5e-006
gb|BJ214392.1|BJ214392 BJ214392 Y. Ogihara unpublished cDNA... 56 5e-006
gb|BJ218685.1|BJ218685 BJ218685 Y. Ogihara unpublished cDNA... 56 5e-006
gb|BJ320914.1|BJ320914 BJ320914 Y. Ogihara unpublished cDNA... 56 5e-006
gb|CA628775.1|CA628775 wle1n.pk0009.c11 wle1n Triticum aest... 56 5e-006
gb|CD894557.1|CD894557 G118.126I10F010823 G118 Triticum aes... 56 5e-006
gb|CD894558.1|CD894558 G118.126I10R011119 G118 Triticum aes... 56 5e-006
gb|CD895053.1|CD895053 G118.127N13R011119 G118 Triticum aes... 56 5e-006
gb|CD930608.1|CD930608 GR45.111N11F010418 GR45 Triticum aes... 56 5e-006
gb|CD938061.1|CD938061 OV.108P07F010206 OV Triticum aestivu... 56 5e-006
gb|CK152815.1|CK152815 FGAS035891 Triticum aestivum FGAS: T... 56 5e-006
gb|AL810086.1|AL810086 AL810086 d:15 Triticum aestivum cDNA... 56 5e-006
gb|AL810577.1|AL810577 AL810577 e:29 Triticum aestivum cDNA... 56 5e-006
gb|AL811907.1|AL811907 AL811907 d:15 Triticum aestivum cDNA... 56 5e-006
gb|CV064525.1|CV064525 WNEL12a12 Wheat EST endosperm librar... 56 5e-006
gb|CV781981.1|CV781981 FGAS076394 Triticum aestivum FGAS: L... 56 5e-006
gb|BJ315409.1|BJ315409 BJ315409 Y. Ogihara unpublished cDNA... 50 3e-004
gb|CK198871.1|CK198871 FGAS007359 Triticum aestivum FGAS: L... 48 0.001
gb|CK152877.1|CK152877 FGAS035955 Triticum aestivum FGAS: T... 46 0.005
gb|CA722123.1|CA722123 wds1c.pk003.n13.f wds1c Triticum mon... 44 0.021
gb|BE445079.1|BE445079 WHE1131_B08_D15ZS Wheat etiolated se... 42 0.081
gb|BF199673.1|BF199673 WHE0591-0594_I07_I07ZE Triticum mono... 42 0.081
gb|BF484605.1|BF484605 WHE2317_E08_I15ZS Wheat pre-anthesis... 42 0.081
gb|BJ216051.1|BJ216051 BJ216051 Y. Ogihara unpublished cDNA... 42 0.081
gb|BJ275023.1|BJ275023 BJ275023 Y. Ogihara unpublished cDNA... 42 0.081
gb|BQ483400.1|BQ483400 WHE3508_B06_D12ZS Wheat unstressed r... 42 0.081
gb|BQ803865.1|BQ803865 WHE2843_A03_B05ZS Triticum monococcu... 42 0.081
gb|BU100454.1|BU100454 WHE3353_E04_J07ZS Chinese Spring alu... 42 0.081
gb|BU101199.1|BU101199 WHE3366_A06_B12ZS Chinese Spring alu... 42 0.081
gb|BJ214871.1|BJ214871 BJ214871 Y. Ogihara unpublished cDNA... 42 0.081
gb|BJ252204.1|BJ252204 BJ252204 Y. Ogihara unpublished cDNA... 42 0.081
gb|BJ266826.1|BJ266826 BJ266826 Y. Ogihara unpublished cDNA... 42 0.081
gb|BJ267012.1|BJ267012 BJ267012 Y. Ogihara unpublished cDNA... 42 0.081
gb|BJ272127.1|BJ272127 BJ272127 Y. Ogihara unpublished cDNA... 42 0.081
gb|BJ279176.1|BJ279176 BJ279176 Y. Ogihara unpublished cDNA... 42 0.081
gb|BJ284237.1|BJ284237 BJ284237 Y. Ogihara unpublished cDNA... 42 0.081
gb|BJ286347.1|BJ286347 BJ286347 Y. Ogihara unpublished cDNA... 42 0.081
gb|BJ311537.1|BJ311537 BJ311537 Y. Ogihara unpublished cDNA... 42 0.081
gb|CA614945.1|CA614945 wr1.pk178.g9 wr1 Triticum aestivum c... 42 0.081
gb|CA632472.1|CA632472 wle1n.pk0059.e1 wle1n Triticum aesti... 42 0.081
gb|CA638913.1|CA638913 wre1n.pk0018.a10 wre1n Triticum aest... 42 0.081
gb|CA652032.1|CA652032 wre1n.pk178.c1 wre1n Triticum aestiv... 42 0.081
gb|CD373616.1|CD373616 WHE0435_H10_P19ZT CS wheat etiolated... 42 0.081
gb|CD897157.1|CD897157 G174.104P23F010823 G174 Triticum aes... 42 0.081
gb|CD928111.1|CD928111 GR45.104A14F010322 GR45 Triticum aes... 42 0.081
gb|CD929827.1|CD929827 GR45.109E09R010612 GR45 Triticum aes... 42 0.081
gb|CD939143.1|CD939143 OV.112H11F010309 OV Triticum aestivu... 42 0.081
gb|CK153774.1|CK153774 FGAS032431 Triticum aestivum FGAS: T... 42 0.081
gb|CK200839.1|CK200839 FGAS009356 Triticum aestivum FGAS: L... 42 0.081
gb|CK208114.1|CK208114 FGAS019795 Triticum aestivum FGAS: L... 42 0.081
gb|CV780327.1|CV780327 FGAS074736 Triticum aestivum FGAS: L... 42 0.081
gb|DN828918.1|DN828918 KUCD01_02_D11_T3 WSWR cDNA library T... 42 0.081
gb|BT009232.1| Triticum aestivum clone wle1n.pk0102.g9:fis,... 42 0.081
gb|CA594383.1|CA594383 wpa1c.pk006.h19 wpa1c Triticum aesti... 40 0.32
gb|CA604682.1|CA604682 wr1.pk0043.g3 wr1 Triticum aestivum ... 40 0.32
gb|CD454581.1|CD454581 WHE2328_C01_F02ZT CS wheat pre-anthe... 40 0.32
gb|CK208206.1|CK208206 FGAS019890 Triticum aestivum FGAS: L... 40 0.32
>gb|CD490941.1|CD490941 WHE3008_H06_P12ZT Wheat etiolated seedling shoot normalized cDNA
library Triticum aestivum cDNA clone WHE3008_H06_P12,
mRNA sequence
Length = 745
Score = 363 bits (183), Expect = 2e-098
Identities = 258/283 (91%)
Strand = Plus / Plus
Query: 268 cagcctcgcccttgagcaagcgcgagaaccacagcgccgatgctttcgggtgcctggaca 327
||||||||||||| || ||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 259 cagcctcgcccttcaggaagcgcgagaaccacagggccgatgctttaggatgcctggaca 318
Query: 328 gcccgttcttgtagtccacgtaaactatgccgaacctcttggtgtagcccattgcccact 387
|||| |||||||| || ||||||||||| || |||||||||||||||||||| |||||||
Sbjct: 319 gcccattcttgtaatcgacgtaaactataccaaacctcttggtgtagcccatagcccact 378
Query: 388 cgaagttgtccaggaacgaccacgcaaagtacccgcggacatcagctccgtccttgatcg 447
| |||||||||||||| ||||||||||||||||| |||| |||||||||||||||||| |
Sbjct: 379 caaagttgtccaggaatgaccacgcaaagtacccacggatatcagctccgtccttgatgg 438
Query: 448 cttgcgcaactgaattgaggtaccctttgaagtaaccgaccctcgtcgtgtcgtttagga 507
|||| ||||||||||||||||| ||||||||||||||||| || |||||||| |||||||
Sbjct: 439 cttgtgcaactgaattgaggtatcctttgaagtaaccgactcttgtcgtgtcatttagga 498
Query: 508 cctggtcaagcgttgcggattgatcgtcctcttcatccatgcc 550
|||||||||| |||||||||||||| || || |||||||||||
Sbjct: 499 cctggtcaagtgttgcggattgatcatcttcatcatccatgcc 541
Score = 48.1 bits (24), Expect = 0.001
Identities = 51/58 (87%), Gaps = 4/58 (6%)
Strand = Plus / Plus
Query: 60 tacatttcagctagtgctggatcaatggcagtcactagaggtataggcaggtagcaca 117
|||||||||||||||| |||||||||| ||| ||| ||||||||||||| ||||||
Sbjct: 58 tacatttcagctagtgttggatcaatgacag--act--aggtataggcaggaagcaca 111
>gb|CA625704.1|CA625704 wl1n.pk0133.c11 wl1n Triticum aestivum cDNA clone wl1n.pk0133.c11
5' end, mRNA sequence
Length = 286
Score = 295 bits (149), Expect = 3e-078
Identities = 254/285 (89%), Gaps = 3/285 (1%)
Strand = Plus / Minus
Query: 357 ccgaacctc-ttggtgtag-cccattg-cccactcgaagttgtccaggaacgaccacgca 413
||||||||| ||||||||| ||||| | |||||||||||||||||||||| ||||||||
Sbjct: 285 ccgaacctccttggtgtagccccatagccccactcgaagttgtccaggaatgaccacgcg 226
Query: 414 aagtacccgcggacatcagctccgtccttgatcgcttgcgcaactgaattgaggtaccct 473
|||||||| ||||||||||| |||||||||||||| || ||||| ||||||||||| |||
Sbjct: 225 aagtacccacggacatcagccccgtccttgatcgcctgtgcaaccgaattgaggtatcct 166
Query: 474 ttgaagtaaccgaccctcgtcgtgtcgtttaggacctggtcaagcgttgcggattgatcg 533
|||||||| ||||| ||| |||||||||||||||||||||||| ||| ||||| ||||||
Sbjct: 165 ttgaagtagccgactctcttcgtgtcgtttaggacctggtcaatcgtcgcggactgatcg 106
Query: 534 tcctcttcatccatgccattctcagtaacataaattgctggattattgtacttcttcgct 593
|| || |||||||||||||||||||||||||||||| |||| || ||||| |||||| ||
Sbjct: 105 tcttcatcatccatgccattctcagtaacataaattactgggttgttgtatttcttcact 46
Query: 594 atataattaagtgacttatgaaggccccaaggaactatgaaaagc 638
||||| ||||| | || |||||||||||||||||||||| ||||
Sbjct: 45 atatagttaagcaatttgtgaaggccccaaggaactatgacaagc 1
>gb|BQ806804.1|BQ806804 WHE3583_E09_I17ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3583_E09_I17, mRNA sequence
Length = 742
Score = 212 bits (107), Expect = 4e-053
Identities = 278/335 (82%)
Strand = Plus / Minus
Query: 748 caatgagtcttgaagtataatgatttactccaacaaaatcaattttgttcctcatgaact 807
|||||| |||||| ||||| ||||||| ||||| ||||||||||||||||||||| || |
Sbjct: 622 caatgattcttgatgtatagtgatttaatccaataaaatcaattttgttcctcatcaatt 563
Query: 808 ctttatctttctctgaaaaggttggaagatcactgcccagtcgctgacgcatgctttctg 867
| |||||||| || || ||||||||| ||||| || ||| |||||||||||||
Sbjct: 562 cacggtctttctcagagaattttggaagatattcgcccactctctggcgcatgctttctg 503
Query: 868 ggtaatcaccaaaatatattggatctaggtaccatccaagttgaaagtcaagcctccgct 927
||||||||||||| |||||||| || ||| ||||||||||||||||||||| | |||
Sbjct: 502 ggtaatcaccaaagtatattgggtccaggaaccatccaagttgaaagtcaatgcgccgtg 443
Query: 928 gtgcagcaatttggtcttccacattttcagaaaatggctctgtacattcgcaatcaacaa 987
||||||| |||||||||| || || || |||||| | ||||| ||||||| ||
Sbjct: 442 ctgcagcagcctggtcttccattttgtccgactttggctccgcccattcacaatcaataa 383
Query: 988 ccaaccctacttcaccaccttgtgcagccttgaattttcttctataaacatcaacagcag 1047
| || ||||||| |||||||||| |||||||||||||||||| || |||||||||||||
Sbjct: 382 caaatcctacttgaccaccttgtttagccttgaattttcttctgtagacatcaacagcag 323
Query: 1048 cagcatgagccaagatttggtgatgggcagccaag 1082
|||||||||| ||||| ||||||||| ||||||||
Sbjct: 322 cagcatgagctaagatctggtgatggccagccaag 288
Score = 58.0 bits (29), Expect = 1e-006
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 634 aaagccattcagatgcagccctttcaccaattttttcaccactattccatttttctattc 693
||||||| ||||| ||||| |||||||||||| |||||| ||| ||||||| ||| |||
Sbjct: 742 aaagccactcagacgcagctctttcaccaattgcttcaccgctactccatttgtctgttc 683
Query: 694 gctccatttgttg 706
||| ||||||||
Sbjct: 682 tctctatttgttg 670
>gb|AJ614597.1|AJ614597 AJ614597 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 10482R, mRNA
sequence
Length = 727
Score = 212 bits (107), Expect = 4e-053
Identities = 278/335 (82%)
Strand = Plus / Minus
Query: 748 caatgagtcttgaagtataatgatttactccaacaaaatcaattttgttcctcatgaact 807
|||||| |||||| ||||| ||||||| ||||| ||||||||||||||||||||| || |
Sbjct: 412 caatgattcttgatgtatagtgatttaatccaataaaatcaattttgttcctcatcaatt 353
Query: 808 ctttatctttctctgaaaaggttggaagatcactgcccagtcgctgacgcatgctttctg 867
| |||||||| || || ||||||||| ||||| || ||| |||||||||||||
Sbjct: 352 cacggtctttctcagagaattttggaagatattcgcccactctctggcgcatgctttctg 293
Query: 868 ggtaatcaccaaaatatattggatctaggtaccatccaagttgaaagtcaagcctccgct 927
||||||||||||| |||||||| || ||| ||||||||||||||||||||| | |||
Sbjct: 292 ggtaatcaccaaagtatattgggtccaggaaccatccaagttgaaagtcaatgcgccgtg 233
Query: 928 gtgcagcaatttggtcttccacattttcagaaaatggctctgtacattcgcaatcaacaa 987
||||||| |||||||||| || || || |||||| | ||||| ||||||| ||
Sbjct: 232 ctgcagcagcctggtcttccattttgtccgactttggctccgcccattcacaatcaataa 173
Query: 988 ccaaccctacttcaccaccttgtgcagccttgaattttcttctataaacatcaacagcag 1047
| || ||||||| |||||||||| |||||||||||||||||| || |||||||||||||
Sbjct: 172 caaatcctacttgaccaccttgtttagccttgaattttcttctgtagacatcaacagcag 113
Query: 1048 cagcatgagccaagatttggtgatgggcagccaag 1082
|||||||||| ||||| ||||||||| ||||||||
Sbjct: 112 cagcatgagctaagatctggtgatggccagccaag 78
Score = 83.8 bits (42), Expect = 2e-014
Identities = 144/178 (80%)
Strand = Plus / Minus
Query: 529 gatcgtcctcttcatccatgccattctcagtaacataaattgctggattattgtacttct 588
||||||| || ||||||||||||||||| || ||||| ||| |||||| | || ||||
Sbjct: 637 gatcgtcttcgtcatccatgccattctctgttacatatattattggattttcatatttct 578
Query: 589 tcgctatataattaagtgacttatgaaggccccaaggaactatgaaaagccattcagatg 648
| |||||||||| | || || ||| ||||| |||||||| |||||||| ||||| |
Sbjct: 577 ttactatataattgattgttttccgaataccccagggaactattaaaagccactcagacg 518
Query: 649 cagccctttcaccaattttttcaccactattccatttttctattcgctccatttgttg 706
|||| |||||||||||| |||||| ||| ||||||| ||| ||| ||| ||||||||
Sbjct: 517 cagctctttcaccaattgcttcaccgctactccatttgtctgttctctctatttgttg 460
>gb|BJ243948.1|BJ243948 BJ243948 Y. Ogihara unpublished cDNA library, Wh_f Triticum aestivum
cDNA clone whf13i05 5', mRNA sequence
Length = 665
Score = 176 bits (89), Expect = 2e-042
Identities = 203/241 (84%)
Strand = Plus / Minus
Query: 842 gcccagtcgctgacgcatgctttctgggtaatcaccaaaatatattggatctaggtacca 901
||||| || ||| |||||||||||||||||||||||||| |||||||| || ||| ||||
Sbjct: 615 gcccactctctggcgcatgctttctgggtaatcaccaaagtatattgggtccaggaacca 556
Query: 902 tccaagttgaaagtcaagcctccgctgtgcagcaatttggtcttccacattttcagaaaa 961
||||||||||||||||| | ||| ||||||| |||||||||| || || || |
Sbjct: 555 tccaagttgaaagtcaatgcgccgtgctgcagcagcctggtcttccattttgtccgacat 496
Query: 962 tggctctgtacattcgcaatcaacaaccaaccctacttcaccaccttgtgcagccttgaa 1021
|||||| | ||||| ||||||| ||| |||||||||| |||||||| |||||||||
Sbjct: 495 tggctccgcccattcacaatcaataacaaaccctacttggccaccttgcttagccttgaa 436
Query: 1022 ttttcttctataaacatcaacagcagcagcatgagccaagatttggtgatgggcagccaa 1081
||||||||| || ||||||||||||||||||||||| ||||| ||||||||| |||||||
Sbjct: 435 ttttcttctgtagacatcaacagcagcagcatgagctaagatctggtgatggccagccaa 376
Query: 1082 g 1082
|
Sbjct: 375 g 375
>gb|CK195913.1|CK195913 FGAS004359 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 814
Score = 131 bits (66), Expect = 1e-028
Identities = 319/402 (79%), Gaps = 1/402 (0%)
Strand = Plus / Minus
Query: 288 cgcgagaaccacagcgccgatgctttcgggtgcctggacagcccgttcttgtagtccacg 347
||||||||||||| ||||||||||| ||||| | || |||||||||||||| || ||
Sbjct: 706 cgcgagaaccacatggccgatgctttagggtgtcgtgagagcccgttcttgtaatcaaca 647
Query: 348 taaactatgccgaacctcttggtgtagcccattgcccactcgaagttgtccaggaacgac 407
|| || || || |||||||||||| | ||||| |||||||| ||||| |||| ||| |||
Sbjct: 646 tagacaatcccaaacctcttggtg-atcccatcgcccactcaaagttatccacgaatgac 588
Query: 408 cacgcaaagtacccgcggacatcagctccgtccttgatcgcttgcgcaactgaattgagg 467
|| |||||||| || || ||||| || || ||||| || ||||| || || | | |
Sbjct: 587 catgcaaagtatccacgaacatcggcaccatcctttattgcttgtgcgacagcaccaaca 528
Query: 468 taccctttgaagtaaccgaccctcgtcgtgtcgtttaggacctggtcaagcgttgcggat 527
|| ||||||||| || |||||| | ||||| |||| || ||| |||| | ||| |||
Sbjct: 527 tatcctttgaagaaattaaccctctttgtgtcatttaagaactgatcaactggtgctgat 468
Query: 528 tgatcgtcctcttcatccatgccattctcagtaacataaattgctggattattgtacttc 587
||||||| || ||||||||||||||||| || ||||| ||| |||||| | ||| |||
Sbjct: 467 ggatcgtcttcgtcatccatgccattctctgttacatatattattggattttcgtatttc 408
Query: 588 ttcgctatataattaagtgacttatgaaggccccaaggaactatgaaaagccattcagat 647
|| |||||||||| | || || ||| |||||||||||||| |||||||| |||||
Sbjct: 407 tttactatataattgattgttttccgaataccccaaggaactattaaaagccactcagac 348
Query: 648 gcagccctttcaccaattttttcaccactattccatttttct 689
||||| |||||||||||| |||||| ||| |||||||||||
Sbjct: 347 gcagctctttcaccaattgcttcaccgctactccatttttct 306
Score = 75.8 bits (38), Expect = 6e-012
Identities = 107/130 (82%)
Strand = Plus / Minus
Query: 748 caatgagtcttgaagtataatgatttactccaacaaaatcaattttgttcctcatgaact 807
|||||| ||||| ||||| ||||||| ||||| ||||||||||||||||||||| || |
Sbjct: 241 caatgattcttgttgtatagtgatttaatccaataaaatcaattttgttcctcatcaatt 182
Query: 808 ctttatctttctctgaaaaggttggaagatcactgcccagtcgctgacgcatgctttctg 867
| |||||||| || || ||||||||| ||||| || ||| |||||||||||||
Sbjct: 181 cacggtctttctccgagaattttggaagatattcgcccactctctggcgcatgctttctg 122
Query: 868 ggtaatcacc 877
||||||||||
Sbjct: 121 ggtaatcacc 112
>gb|BE404125.1|BE404125 WHE1201_E08_I15ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1201_E08_I15, mRNA
sequence
Length = 595
Score = 125 bits (63), Expect = 7e-027
Identities = 144/171 (84%)
Strand = Plus / Minus
Query: 748 caatgagtcttgaagtataatgatttactccaacaaaatcaattttgttcctcatgaact 807
|||||| ||||| ||||| ||||||| ||||| ||||||||||||||||||||| || |
Sbjct: 216 caatgattcttgttgtatagtgatttaatccaataaaatcaattttgttcctcatcaatt 157
Query: 808 ctttatctttctctgaaaaggttggaagatcactgcccagtcgctgacgcatgctttctg 867
| |||||||| || || ||||||||| ||||| || ||| |||||||||||||
Sbjct: 156 cacggtctttctccgagaattttggaagatattcgcccactctctggcgcatgctttctg 97
Query: 868 ggtaatcaccaaaatatattggatctaggtaccatccaagttgaaagtcaa 918
||||||||||||| |||||||| || ||| |||||||||||||||||||||
Sbjct: 96 ggtaatcaccaaagtatattgggtccaggaaccatccaagttgaaagtcaa 46
Score = 97.6 bits (49), Expect = 2e-018
Identities = 133/161 (82%)
Strand = Plus / Minus
Query: 529 gatcgtcctcttcatccatgccattctcagtaacataaattgctggattattgtacttct 588
||||||| || ||||||||||||||||| || ||||| ||| |||||| | ||| ||||
Sbjct: 441 gatcgtcttcgtcatccatgccattctctgttacatatattattggattttcgtatttct 382
Query: 589 tcgctatataattaagtgacttatgaaggccccaaggaactatgaaaagccattcagatg 648
| |||||||||| | || || ||| |||||||||||||| |||||||| ||||| |
Sbjct: 381 ttactatataattgattgttttccgaataccccaaggaactattaaaagccactcagacg 322
Query: 649 cagccctttcaccaattttttcaccactattccatttttct 689
|||| |||||||||||| |||||| ||| |||||||||||
Sbjct: 321 cagctctttcaccaattgcttcaccgctactccatttttct 281
>gb|BE444241.1|BE444241 WHE1128_H03_P06ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1128_H03_P06,
mRNA sequence
Length = 645
Score = 103 bits (52), Expect = 3e-020
Identities = 217/272 (79%)
Strand = Plus / Minus
Query: 285 aagcgcgagaaccacagcgccgatgctttcgggtgcctggacagcccgttcttgtagtcc 344
|||||||||||||||| || |||||||| ||| ||| ||| |||||||||||||| ||
Sbjct: 298 aagcgcgagaaccacatggctgatgctttagggcgccgggagagcccgttcttgtaatca 239
Query: 345 acgtaaactatgccgaacctcttggtgtagcccattgcccactcgaagttgtccaggaac 404
|| || || || || |||||||||||| | ||||| |||||||| ||||| |||| |||
Sbjct: 238 acatagacaatcccaaacctcttggtgaatcccatcgcccactcaaagttatccacgaat 179
Query: 405 gaccacgcaaagtacccgcggacatcagctccgtccttgatcgcttgcgcaactgaattg 464
||||| |||||||| || || ||||| || || ||||| || ||||| || |||| |
Sbjct: 178 gaccatgcaaagtatccacgaacatcggcaccatcctttattgcttgtgcgactgcacca 119
Query: 465 aggtaccctttgaagtaaccgaccctcgtcgtgtcgtttaggacctggtcaagcgttgcg 524
| || ||||||||| || ||||||| | ||||| |||| || ||| |||| | |||
Sbjct: 118 acatatcctttgaagaaattgaccctctttgtgtcatttaagaactgatcaactggtgct 59
Query: 525 gattgatcgtcctcttcatccatgccattctc 556
||| ||||||| || |||||||||||||||||
Sbjct: 58 gatggatcgtcttcgtcatccatgccattctc 27
>gb|BE444242.1|BE444242 WHE1128_H04_P08ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1128_H04_P08,
mRNA sequence
Length = 539
Score = 103 bits (52), Expect = 3e-020
Identities = 217/272 (79%)
Strand = Plus / Minus
Query: 285 aagcgcgagaaccacagcgccgatgctttcgggtgcctggacagcccgttcttgtagtcc 344
|||||||||||||||| || |||||||| ||| ||| ||| |||||||||||||| ||
Sbjct: 326 aagcgcgagaaccacatggctgatgctttagggcgccgggagagcccgttcttgtaatca 267
Query: 345 acgtaaactatgccgaacctcttggtgtagcccattgcccactcgaagttgtccaggaac 404
|| || || || || |||||||||||| | ||||| |||||||| ||||| |||| |||
Sbjct: 266 acatagacaatcccaaacctcttggtgaatcccatcgcccactcaaagttatccacgaat 207
Query: 405 gaccacgcaaagtacccgcggacatcagctccgtccttgatcgcttgcgcaactgaattg 464
||||| |||||||| || || ||||| || || ||||| || ||||| || |||| |
Sbjct: 206 gaccatgcaaagtatccacgaacatcggcaccatcctttattgcttgtgcgactgcacca 147
Query: 465 aggtaccctttgaagtaaccgaccctcgtcgtgtcgtttaggacctggtcaagcgttgcg 524
| || ||||||||| || ||||||| | ||||| |||| || ||| |||| | |||
Sbjct: 146 acatatcctttgaagaaattgaccctctttgtgtcatttaagaactgatcaactggtgct 87
Query: 525 gattgatcgtcctcttcatccatgccattctc 556
||| ||||||| || |||||||||||||||||
Sbjct: 86 gatggatcgtcttcgtcatccatgccattctc 55
>gb|BE444737.1|BE444737 WHE1138_G04_M08ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1138_G04_M08,
mRNA sequence
Length = 555
Score = 103 bits (52), Expect = 3e-020
Identities = 217/272 (79%)
Strand = Plus / Minus
Query: 285 aagcgcgagaaccacagcgccgatgctttcgggtgcctggacagcccgttcttgtagtcc 344
|||||||||||||||| || |||||||| ||| ||| ||| |||||||||||||| ||
Sbjct: 342 aagcgcgagaaccacatggctgatgctttagggcgccgggagagcccgttcttgtaatca 283
Query: 345 acgtaaactatgccgaacctcttggtgtagcccattgcccactcgaagttgtccaggaac 404
|| || || || || |||||||||||| | ||||| |||||||| ||||| |||| |||
Sbjct: 282 acatagacaatcccaaacctcttggtgaatcccatcgcccactcaaagttatccacgaat 223
Query: 405 gaccacgcaaagtacccgcggacatcagctccgtccttgatcgcttgcgcaactgaattg 464
||||| |||||||| || || ||||| || || ||||| || ||||| || |||| |
Sbjct: 222 gaccatgcaaagtatccacgaacatcggcaccatcctttattgcttgtgcgactgcacca 163
Query: 465 aggtaccctttgaagtaaccgaccctcgtcgtgtcgtttaggacctggtcaagcgttgcg 524
| || ||||||||| || ||||||| | ||||| |||| || ||| |||| | |||
Sbjct: 162 acatatcctttgaagaaattgaccctctttgtgtcatttaagaactgatcaactggtgct 103
Query: 525 gattgatcgtcctcttcatccatgccattctc 556
||| ||||||| || |||||||||||||||||
Sbjct: 102 gatggatcgtcttcgtcatccatgccattctc 71
>gb|CA644199.1|CA644199 wre1n.pk0078.d5 wre1n Triticum aestivum cDNA clone wre1n.pk0078.d5
5' end, mRNA sequence
Length = 583
Score = 93.7 bits (47), Expect = 2e-017
Identities = 137/167 (82%)
Strand = Plus / Minus
Query: 285 aagcgcgagaaccacagcgccgatgctttcgggtgcctggacagcccgttcttgtagtcc 344
|||||||||||||||| || |||||||| ||| ||| ||| |||||||||||||| ||
Sbjct: 264 aagcgcgagaaccacatggctgatgctttagggcgccgggagagcccgttcttgtaatca 205
Query: 345 acgtaaactatgccgaacctcttggtgtagcccattgcccactcgaagttgtccaggaac 404
|| || || || || |||||||||||| | ||||| |||||||| ||||| |||| |||
Sbjct: 204 acatagacaatcccaaacctcttggtgaatcccatcgcccactcaaagttatccacgaat 145
Query: 405 gaccacgcaaagtacccgcggacatcagctccgtccttgatcgcttg 451
||||| |||||||| || || ||||| || || ||||| || |||||
Sbjct: 144 gaccatgcaaagtatccacgaacatcggcaccatcctttattgcttg 98
>gb|CK206523.1|CK206523 FGAS018120 Triticum aestivum FGAS: Library 5 GATE 7 Triticum aestivum
cDNA, mRNA sequence
Length = 1140
Score = 91.7 bits (46), Expect = 1e-016
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 1013 agccttgaattttcttctataaacatcaacagcagcagcatgagccaagatttggtgatg 1072
|||| ||||||||||||| || ||||||||||||||||||||||| ||||| ||||||||
Sbjct: 881 agccctgaattttcttctgtagacatcaacagcagcagcatgagctaagatctggtgatg 822
Query: 1073 ggcagccaag 1082
| ||||||||
Sbjct: 821 gccagccaag 812
>gb|BJ285932.1|BJ285932 BJ285932 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr13i05 3', mRNA sequence
Length = 733
Score = 87.7 bits (44), Expect = 2e-015
Identities = 134/164 (81%)
Strand = Plus / Plus
Query: 288 cgcgagaaccacagcgccgatgctttcgggtgcctggacagcccgttcttgtagtccacg 347
||||||||||||| ||||||||||| ||||| | || |||||||||||||| || ||
Sbjct: 421 cgcgagaaccacatggccgatgctttagggtgtcgtgagagcccgttcttgtaatcaaca 480
Query: 348 taaactatgccgaacctcttggtgtagcccattgcccactcgaagttgtccaggaacgac 407
|| || || || |||||||||||| | ||||| |||||||| ||||| |||| ||| |||
Sbjct: 481 tagacaatcccaaacctcttggtgaatcccatcgcccactcaaagttatccacgaatgac 540
Query: 408 cacgcaaagtacccgcggacatcagctccgtccttgatcgcttg 451
|| |||||||| || || ||||| || || ||||| || |||||
Sbjct: 541 catgcaaagtatccacgaacatcggcaccatcctttattgcttg 584
Score = 42.1 bits (21), Expect = 0.081
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 529 gatcgtcctcttcatccatgccattctcagtaacata 565
||||||| || ||||||||||||||||| || |||||
Sbjct: 663 gatcgtcttcgtcatccatgccattctctgttacata 699
>gb|CD373656.1|CD373656 WHE1201_E08_I15ZT CS wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1201_E08_I15, mRNA
sequence
Length = 766
Score = 87.7 bits (44), Expect = 2e-015
Identities = 134/164 (81%)
Strand = Plus / Plus
Query: 288 cgcgagaaccacagcgccgatgctttcgggtgcctggacagcccgttcttgtagtccacg 347
||||||||||||| ||||||||||| ||||| | || |||||||||||||| || ||
Sbjct: 581 cgcgagaaccacatggccgatgctttagggtgtcgtgagagcccgttcttgtaatcaaca 640
Query: 348 taaactatgccgaacctcttggtgtagcccattgcccactcgaagttgtccaggaacgac 407
|| || || || |||||||||||| | ||||| |||||||| ||||| |||| ||| |||
Sbjct: 641 tagacaatcccaaacctcttggtgaatcccatcgcccactcaaagttatccacgaatgac 700
Query: 408 cacgcaaagtacccgcggacatcagctccgtccttgatcgcttg 451
|| |||||||| || || ||||| || || ||||| || |||||
Sbjct: 701 catgcaaagtatccacgaacatcggcaccatcctttattgcttg 744
>gb|CD933933.1|CD933933 GR45.122H21F010721 GR45 Triticum aestivum cDNA clone GR45122H21,
mRNA sequence
Length = 549
Score = 87.7 bits (44), Expect = 2e-015
Identities = 134/164 (81%)
Strand = Plus / Minus
Query: 288 cgcgagaaccacagcgccgatgctttcgggtgcctggacagcccgttcttgtagtccacg 347
||||||||||||| ||||||||||| ||||| | || |||||||||||||| || ||
Sbjct: 188 cgcgagaaccacatggccgatgctttagggtgtcgtgagagcccgttcttgtaatcaaca 129
Query: 348 taaactatgccgaacctcttggtgtagcccattgcccactcgaagttgtccaggaacgac 407
|| || || || |||||||||||| | ||||| |||||||| ||||| |||| ||| |||
Sbjct: 128 tagacaatcccaaacctcttggtgaatcccatcgcccactcaaagttatccacgaatgac 69
Query: 408 cacgcaaagtacccgcggacatcagctccgtccttgatcgcttg 451
|| |||||||| || || ||||| || || ||||| || |||||
Sbjct: 68 catgcaaagtatccacgaacatcggcaccatcctttattgcttg 25
>gb|CK169970.1|CK169970 FGAS044670 Triticum aestivum FGAS: TaLt6 Triticum aestivum cDNA,
mRNA sequence
Length = 1174
Score = 87.7 bits (44), Expect = 2e-015
Identities = 134/164 (81%)
Strand = Plus / Minus
Query: 288 cgcgagaaccacagcgccgatgctttcgggtgcctggacagcccgttcttgtagtccacg 347
||||||||||||| ||||||||||| ||||| | || |||||||||||||| || ||
Sbjct: 335 cgcgagaaccacatggccgatgctttagggtgtcgtgagagcccgttcttgtaatcaaca 276
Query: 348 taaactatgccgaacctcttggtgtagcccattgcccactcgaagttgtccaggaacgac 407
|| || || || |||||||||||| | ||||| |||||||| ||||| |||| ||| |||
Sbjct: 275 tagacaatcccaaacctcttggtgaatcccatcgcccactcaaagttatccacgaatgac 216
Query: 408 cacgcaaagtacccgcggacatcagctccgtccttgatcgcttg 451
|| |||||||| || || ||||| || || ||||| || |||||
Sbjct: 215 catgcaaagtatccacgaacatcggcaccatcctttattgcttg 172
>gb|CA625452.1|CA625452 wl1n.pk0139.g4 wl1n Triticum aestivum cDNA clone wl1n.pk0139.g4 5'
end, mRNA sequence
Length = 537
Score = 83.8 bits (42), Expect = 2e-014
Identities = 111/134 (82%)
Strand = Plus / Minus
Query: 285 aagcgcgagaaccacagcgccgatgctttcgggtgcctggacagcccgttcttgtagtcc 344
||||| |||||||||| || |||||||| ||||| | || |||||||||||||| ||
Sbjct: 255 aagcgtgagaaccacatggctgatgctttagggtgtcgggtgagcccgttcttgtaatca 196
Query: 345 acgtaaactatgccgaacctcttggtgtagcccattgcccactcgaagttgtccaggaac 404
|| || || || || |||||||||||| | ||||| |||||||| ||||| ||||||||
Sbjct: 195 acatagacaatcccaaacctcttggtgaatcccatcgcccactcaaagttatccaggaat 136
Query: 405 gaccacgcaaagta 418
||||| ||||||||
Sbjct: 135 gaccatgcaaagta 122
>gb|CA625465.1|CA625465 wl1n.pk0139.f3 wl1n Triticum aestivum cDNA clone wl1n.pk0139.f3 5'
end, mRNA sequence
Length = 542
Score = 83.8 bits (42), Expect = 2e-014
Identities = 111/134 (82%)
Strand = Plus / Minus
Query: 285 aagcgcgagaaccacagcgccgatgctttcgggtgcctggacagcccgttcttgtagtcc 344
||||| |||||||||| || |||||||| ||||| | || |||||||||||||| ||
Sbjct: 255 aagcgtgagaaccacatggctgatgctttagggtgtcgggtgagcccgttcttgtaatca 196
Query: 345 acgtaaactatgccgaacctcttggtgtagcccattgcccactcgaagttgtccaggaac 404
|| || || || || |||||||||||| | ||||| |||||||| ||||| ||||||||
Sbjct: 195 acatagacaatcccaaacctcttggtgaatcccatcgcccactcaaagttatccaggaat 136
Query: 405 gaccacgcaaagta 418
||||| ||||||||
Sbjct: 135 gaccatgcaaagta 122
>gb|CK152799.1|CK152799 FGAS035875 Triticum aestivum FGAS: TaLt3 Triticum aestivum cDNA,
mRNA sequence
Length = 867
Score = 73.8 bits (37), Expect = 2e-011
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 285 aagcgcgagaaccacagcgccgatgctttcgggtgcctggacagcccgttcttgtagtcc 344
|||||||||||||||| || |||||||| ||| ||| ||| |||||||||||||| | |
Sbjct: 691 aagcgcgagaaccacatggctgatgctttagggcgccgggagagcccgttcttgtaattc 750
Query: 345 acgtaaactatgccgaacctcttggtgtagcccattgcccactc 388
|| || || || || |||||||||||| | ||||| ||||||||
Sbjct: 751 acatanaccatcccaaacctcttggtgaatcccatcgcccactc 794
>gb|BE404667.1|BE404667 WHE0445_H11_O21ZS Wheat etiolated seedling root cDNA library Triticum
aestivum cDNA clone WHE0445_H11_O21, mRNA sequence
Length = 469
Score = 56.0 bits (28), Expect = 5e-006
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 1043 agcagcagcatgagccaagatttggtgatgggcagccaag 1082
||||||||||||||| ||||| ||||||||| ||||||||
Sbjct: 469 agcagcagcatgagctaagatctggtgatggccagccaag 430
>gb|BF473283.1|BF473283 WHE0926_F12_K24ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0926_F12_K24, mRNA sequence
Length = 592
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagta 418
|||||||||||||||||||| ||||||||||||||
Sbjct: 306 ccactcgaagttgtccaggagggaccacgcaaagta 271
>gb|BF483316.1|BF483316 WHE1791_D05_G09ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1791_D05_G09, mRNA sequence
Length = 553
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagta 418
|||||||||||||||||||| ||||||||||||||
Sbjct: 398 ccactcgaagttgtccaggagggaccacgcaaagta 363
>gb|BM138675.1|BM138675 WHE0496_E09_I18ZS Wheat Fusarium graminearum infected spike cDNA
library Triticum aestivum cDNA clone WHE0496_E09_I18,
mRNA sequence
Length = 533
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagta 418
|||||||||||||||||||| ||||||||||||||
Sbjct: 284 ccactcgaagttgtccaggagggaccacgcaaagta 249
>gb|BJ207110.1|BJ207110 BJ207110 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh2c22 5', mRNA sequence
Length = 598
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagta 418
|||||||||||||||||||| ||||||||||||||
Sbjct: 243 ccactcgaagttgtccaggagggaccacgcaaagta 208
>gb|BJ208051.1|BJ208051 BJ208051 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh6j23 5', mRNA sequence
Length = 621
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagta 418
|||||||||||||||||||| ||||||||||||||
Sbjct: 118 ccactcgaagttgtccaggagggaccacgcaaagta 83
>gb|BJ214392.1|BJ214392 BJ214392 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh2c22 3', mRNA sequence
Length = 610
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagta 418
|||||||||||||||||||| ||||||||||||||
Sbjct: 486 ccactcgaagttgtccaggagggaccacgcaaagta 521
>gb|BJ218685.1|BJ218685 BJ218685 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh9e23 3', mRNA sequence
Length = 735
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagta 418
|||||||||||||||||||| ||||||||||||||
Sbjct: 414 ccactcgaagttgtccaggagggaccacgcaaagta 449
>gb|BJ320914.1|BJ320914 BJ320914 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf18e01 3', mRNA sequence
Length = 541
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagta 418
|||||||||||||||||||| ||||||||||||||
Sbjct: 356 ccactcgaagttgtccaggagggaccacgcaaagta 391
>gb|CA628775.1|CA628775 wle1n.pk0009.c11 wle1n Triticum aestivum cDNA clone
wle1n.pk0009.c11 5' end, mRNA sequence
Length = 238
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagta 418
|||||||||||||||||||| ||||||||||||||
Sbjct: 81 ccactcgaagttgtccaggagggaccacgcaaagta 46
>gb|CD894557.1|CD894557 G118.126I10F010823 G118 Triticum aestivum cDNA clone G118126I10,
mRNA sequence
Length = 669
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagta 418
|||||||||||||||||||| ||||||||||||||
Sbjct: 366 ccactcgaagttgtccaggagggaccacgcaaagta 331
>gb|CD894558.1|CD894558 G118.126I10R011119 G118 Triticum aestivum cDNA clone G118126I10,
mRNA sequence
Length = 629
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagta 418
|||||||||||||||||||| ||||||||||||||
Sbjct: 436 ccactcgaagttgtccaggagggaccacgcaaagta 471
>gb|CD895053.1|CD895053 G118.127N13R011119 G118 Triticum aestivum cDNA clone G118127N13,
mRNA sequence
Length = 613
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagta 418
|||||||||||||||||||| ||||||||||||||
Sbjct: 409 ccactcgaagttgtccaggagggaccacgcaaagta 444
>gb|CD930608.1|CD930608 GR45.111N11F010418 GR45 Triticum aestivum cDNA clone GR45111N11,
mRNA sequence
Length = 601
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagta 418
|||||||||||||||||||| ||||||||||||||
Sbjct: 539 ccactcgaagttgtccaggagggaccacgcaaagta 574
>gb|CD938061.1|CD938061 OV.108P07F010206 OV Triticum aestivum cDNA clone OV108P07, mRNA
sequence
Length = 654
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagta 418
|||||||||||||||||||| ||||||||||||||
Sbjct: 237 ccactcgaagttgtccaggagggaccacgcaaagta 202
>gb|CK152815.1|CK152815 FGAS035891 Triticum aestivum FGAS: TaLt3 Triticum aestivum cDNA,
mRNA sequence
Length = 848
Score = 56.0 bits (28), Expect = 5e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 285 aagcgcgagaaccacagcgccgatgctttcgggtgcctggacagcccgttcttgta 340
|||||||||||||||| || |||||||| ||| ||| ||| ||||||||||||||
Sbjct: 621 aagcgcgagaaccacatggctgatgctttagggcgccgggagagcccgttcttgta 676
>gb|AL810086.1|AL810086 AL810086 d:15 Triticum aestivum cDNA clone H01_d15_plate_5, mRNA
sequence
Length = 528
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagta 418
|||||||||||||||||||| ||||||||||||||
Sbjct: 138 ccactcgaagttgtccaggagggaccacgcaaagta 103
>gb|AL810577.1|AL810577 AL810577 e:29 Triticum aestivum cDNA clone F02_e29_plate_4, mRNA
sequence
Length = 565
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagta 418
||||||||||||||| |||| |||||||||||||||
Sbjct: 469 ccactcgaagttgtcgaggagcgaccacgcaaagta 434
>gb|AL811907.1|AL811907 AL811907 d:15 Triticum aestivum cDNA clone A03_d15_plate_18, mRNA
sequence
Length = 422
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagta 418
|||||||||||||||||||| ||||||||||||||
Sbjct: 138 ccactcgaagttgtccaggagggaccacgcaaagta 103
>gb|CV064525.1|CV064525 WNEL12a12 Wheat EST endosperm library Triticum aestivum cDNA clone
WNEL12a12 5' similar to Oryza sativa chromosome 3 BAC
OSJNBa0004L11 genomic sequence, complete sequence, mRNA
sequence
Length = 518
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagta 418
|||||||||||||||||||| ||||||||||||||
Sbjct: 81 ccactcgaagttgtccaggagggaccacgcaaagta 46
>gb|CV781981.1|CV781981 FGAS076394 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 876
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagta 418
|||||||||||||||||||| ||||||||||||||
Sbjct: 288 ccactcgaagttgtccaggagggaccacgcaaagta 253
>gb|BJ315409.1|BJ315409 BJ315409 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf18e01 5', mRNA sequence
Length = 232
Score = 50.1 bits (25), Expect = 3e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaa 415
|||||||||||||||||||| |||||||||||
Sbjct: 131 ccactcgaagttgtccaggagggaccacgcaaa 99
>gb|CK198871.1|CK198871 FGAS007359 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 867
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagta 418
|||||||||| ||||||||| ||||||||||||||
Sbjct: 681 ccactcgaaggtgtccaggagggaccacgcaaagta 716
>gb|CK152877.1|CK152877 FGAS035955 Triticum aestivum FGAS: TaLt3 Triticum aestivum cDNA,
mRNA sequence
Length = 907
Score = 46.1 bits (23), Expect = 0.005
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 360 aacctcttggtgtagcccattgcccactcgaagttgtccaggaacgaccacgcaaagta 418
|||||||||||| | |||| |||||||| ||||| |||| ||| ||||| ||||||||
Sbjct: 695 aacctcttggtgaattccatcgcccactcaaagttatccacgaatgaccatgcaaagta 753
>gb|CA722123.1|CA722123 wds1c.pk003.n13.f wds1c Triticum monococcum cDNA clone
wds1c.pk003.n13.f 3' end, mRNA sequence
Length = 634
Score = 44.1 bits (22), Expect = 0.021
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagtacccgcggac 427
||||||||||||||| |||| |||||||| ||||| ||| ||||
Sbjct: 314 ccactcgaagttgtcgaggagagaccacgcgaagtanccgaggac 358
>gb|BE445079.1|BE445079 WHE1131_B08_D15ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1131_B08_D15,
mRNA sequence
Length = 509
Score = 42.1 bits (21), Expect = 0.081
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagtacccgcggac 427
||||||||||||||| |||| |||||||| ||||| ||| ||||
Sbjct: 450 ccactcgaagttgtcgaggagagaccacgcgaagtagccgaggac 406
>gb|BF199673.1|BF199673 WHE0591-0594_I07_I07ZE Triticum monococcum vegetative apex cDNA
library Triticum monococcum cDNA clone
WHE0591-0594_I07_I07, mRNA sequence
Length = 452
Score = 42.1 bits (21), Expect = 0.081
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagtacccgcggac 427
||||||||||||||| |||| |||||||| ||||| ||| ||||
Sbjct: 271 ccactcgaagttgtcgaggagagaccacgcgaagtagccgaggac 227
>gb|BF484605.1|BF484605 WHE2317_E08_I15ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2317_E08_I15, mRNA sequence
Length = 532
Score = 42.1 bits (21), Expect = 0.081
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagtacccgcggac 427
||||||||||||||| |||| |||||||| ||||| ||| ||||
Sbjct: 227 ccactcgaagttgtcgaggagagaccacgcgaagtagccgaggac 183
>gb|BJ216051.1|BJ216051 BJ216051 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh9l07 3', mRNA sequence
Length = 586
Score = 42.1 bits (21), Expect = 0.081
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagtacccgcggac 427
||||||||||||||| |||| |||||||| ||||| ||| ||||
Sbjct: 155 ccactcgaagttgtcgaggagagaccacgcgaagtagccgaggac 199
>gb|BJ275023.1|BJ275023 BJ275023 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh5m05 3', mRNA sequence
Length = 720
Score = 42.1 bits (21), Expect = 0.081
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagtacccgcggac 427
||||||||||||||| |||| |||||||| ||||| ||| ||||
Sbjct: 212 ccactcgaagttgtcgaggagagaccacgcgaagtagccgaggac 256
>gb|BQ483400.1|BQ483400 WHE3508_B06_D12ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3508_B06_D12, mRNA sequence
Length = 717
Score = 42.1 bits (21), Expect = 0.081
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 383 ccactcgaagttgtccaggaacgaccacgcaaagtacccgcggac 427
||||||||||||||| |||| |||||||| ||||| ||| ||||
Sbjct: 539 ccactcgaagttgtcgaggagagaccacgcgaagtagccgaggac 495
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 228,543
Number of Sequences: 636343
Number of extensions: 228543
Number of successful extensions: 57667
Number of sequences better than 0.5: 82
Number of HSP's better than 0.5 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57545
Number of HSP's gapped (non-prelim): 120
length of query: 1118
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1098
effective length of database: 354,513,379
effective search space: 389255690142
effective search space used: 389255690142
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)