BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716368.2.1
(1356 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA616648.1|CA616648 wl1n.pk0008.b4 wl1n Triticum aestivu... 605 e-171
dbj|AB158404.1| Triticum aestivum expB mRNA for putative be... 280 2e-073
gb|CK211529.1|CK211529 FGAS023376 Triticum aestivum FGAS: L... 268 9e-070
gb|CA600236.1|CA600236 waw1c.pk006.l17 waw1c Triticum aesti... 244 1e-062
gb|AY543543.1| Triticum aestivum expansin EXPB9 mRNA, compl... 240 2e-061
gb|BE499051.1|BE499051 WHE0960_G11_M22ZS Wheat pre-anthesis... 210 2e-052
gb|DR739450.1|DR739450 FGAS084667 Triticum aestivum FGAS: L... 204 1e-050
gb|CK201768.1|CK201768 FGAS010288 Triticum aestivum FGAS: L... 180 2e-043
gb|DR738434.1|DR738434 FGAS083651 Triticum aestivum FGAS: L... 172 4e-041
gb|AL825524.1|AL825524 AL825524 p:335 Triticum aestivum cDN... 168 6e-040
gb|CA627362.1|CA627362 wl1n.pk0116.f11 wl1n Triticum aestiv... 155 1e-035
gb|CV778976.1|CV778976 FGAS073385 Triticum aestivum FGAS: L... 141 1e-031
gb|CA623443.1|CA623443 wl1n.pk0106.g7 wl1n Triticum aestivu... 139 6e-031
gb|BE403825.1|BE403825 WHE0420_B05_D10ZS Wheat etiolated se... 137 2e-030
gb|CA603882.1|CA603882 wr1.pk0035.g12 wr1 Triticum aestivum... 133 4e-029
gb|BQ743467.1|BQ743467 WHE4104_C11_F22ZS Wheat salt-stresse... 129 5e-028
gb|BQ838171.1|BQ838171 WHE2907_D03_H05ZS Wheat aluminum-str... 129 5e-028
gb|CA627265.1|CA627265 wl1n.pk154.a8 wl1n Triticum aestivum... 129 5e-028
gb|BE414976.1|BE414976 MWL009.F03F990624 ITEC MWL Wheat Roo... 125 9e-027
gb|CA616659.1|CA616659 wl1n.pk0005.f3 wl1n Triticum aestivu... 115 8e-024
gb|CV760781.1|CV760781 FGAS055167 Triticum aestivum FGAS: L... 111 1e-022
gb|AL825997.1|AL825997 AL825997 p:234 Triticum aestivum cDN... 101 1e-019
gb|CK201442.1|CK201442 FGAS009962 Triticum aestivum FGAS: L... 96 8e-018
gb|CV769733.1|CV769733 FGAS064125 Triticum aestivum FGAS: L... 90 5e-016
gb|BJ280799.1|BJ280799 BJ280799 Y. Ogihara unpublished cDNA... 88 2e-015
gb|BJ287436.1|BJ287436 BJ287436 Y. Ogihara unpublished cDNA... 88 2e-015
gb|BQ838005.1|BQ838005 WHE2905_E01_I01ZS Wheat aluminum-str... 88 2e-015
gb|CD452508.1|CD452508 WHE1108_A05_B10ZT CS wheat etiolated... 88 2e-015
gb|CK215734.1|CK215734 FGAS027704 Triticum aestivum FGAS: L... 88 2e-015
gb|BE442908.1|BE442908 WHE1108_A05_B10ZS Wheat etiolated se... 84 3e-014
gb|CV767446.1|CV767446 FGAS061836 Triticum aestivum FGAS: L... 74 3e-011
gb|CV776014.1|CV776014 FGAS070418 Triticum aestivum FGAS: L... 66 7e-009
gb|CA606615.1|CA606615 wr1.pk0070.b10 wr1 Triticum aestivum... 64 3e-008
gb|BJ236789.1|BJ236789 BJ236789 Y. Ogihara unpublished cDNA... 54 3e-005
gb|BJ242327.1|BJ242327 BJ242327 Y. Ogihara unpublished cDNA... 54 3e-005
gb|BJ299385.1|BJ299385 BJ299385 Y. Ogihara unpublished cDNA... 54 3e-005
gb|BJ299585.1|BJ299585 BJ299585 Y. Ogihara unpublished cDNA... 54 3e-005
gb|BQ806609.1|BQ806609 WHE3581_A09_B17ZS Wheat developing g... 54 3e-005
gb|CA706238.1|CA706238 wdk1c.pk023.d11 wdk1c Triticum aesti... 54 3e-005
gb|CD893554.1|CD893554 G118.123P05R011115 G118 Triticum aes... 54 3e-005
gb|CD893799.1|CD893799 G118.124J02F010828 G118 Triticum aes... 54 3e-005
gb|CD897610.1|CD897610 G174.106I03R011120 G174 Triticum aes... 54 3e-005
gb|CD900159.1|CD900159 G174.114K12R011120 G174 Triticum aes... 54 3e-005
gb|CD903894.1|CD903894 G356.111M15R011024 G356 Triticum aes... 54 3e-005
gb|CD905001.1|CD905001 G468.100D20F010614 G468 Triticum aes... 54 3e-005
gb|CA599015.1|CA599015 wyr1c.pk004.d17 wyr1c Triticum aesti... 52 1e-004
gb|BQ167140.1|BQ167140 WHE0058_A04_B08ZK Cheyenne wheat end... 52 1e-004
gb|CD893800.1|CD893800 G118.124J02R011116 G118 Triticum aes... 52 1e-004
gb|BE405600.1|BE405600 WHE1209_C03_E05ZS Wheat etiolated se... 50 4e-004
gb|CA728049.1|CA728049 wdi1c.pk002.m13 wdi1c Triticum aesti... 50 4e-004
gb|CV767247.1|CV767247 FGAS061636 Triticum aestivum FGAS: L... 50 4e-004
gb|CV769175.1|CV769175 FGAS063566 Triticum aestivum FGAS: L... 50 4e-004
gb|CV775476.1|CV775476 FGAS069880 Triticum aestivum FGAS: L... 50 4e-004
gb|BE404627.1|BE404627 WHE0445_E03_I05ZS Wheat etiolated se... 48 0.002
gb|BJ208652.1|BJ208652 BJ208652 Y. Ogihara unpublished cDNA... 48 0.002
gb|BJ315203.1|BJ315203 BJ315203 Y. Ogihara unpublished cDNA... 48 0.002
gb|CA618048.1|CA618048 wl1n.pk0027.h7 wl1n Triticum aestivu... 48 0.002
gb|CA707463.1|CA707463 wdk2c.pk006.i12 wdk2c Triticum aesti... 48 0.002
gb|CD913065.1|CD913065 G550.116L22F010525 G550 Triticum aes... 48 0.002
gb|AJ602412.1|AJ602412 AJ602412 T05 Triticum aestivum cDNA ... 48 0.002
gb|CV776993.1|CV776993 FGAS071397 Triticum aestivum FGAS: L... 48 0.002
gb|DR733211.1|DR733211 FGAS078972 Triticum aestivum FGAS: L... 48 0.002
gb|AY589579.1| Triticum aestivum beta-expansin TaEXPB2 mRNA... 48 0.002
gb|BJ235109.1|BJ235109 BJ235109 Y. Ogihara unpublished cDNA... 46 0.006
gb|BJ237654.1|BJ237654 BJ237654 Y. Ogihara unpublished cDNA... 46 0.006
gb|BJ240324.1|BJ240324 BJ240324 Y. Ogihara unpublished cDNA... 46 0.006
gb|BJ240582.1|BJ240582 BJ240582 Y. Ogihara unpublished cDNA... 46 0.006
gb|CD907763.1|CD907763 G468.107P11F010813 G468 Triticum aes... 46 0.006
gb|CK168886.1|CK168886 FGAS043481 Triticum aestivum FGAS: T... 46 0.006
gb|CK170800.1|CK170800 FGAS045816 Triticum aestivum FGAS: T... 46 0.006
gb|BM136289.1|BM136289 WHE2607_H06_P11ZS Wheat Fusarium gra... 44 0.025
gb|BJ293199.1|BJ293199 BJ293199 Y. Ogihara unpublished cDNA... 44 0.025
gb|BQ162131.1|BQ162131 WHE0497_F10_L19ZT Wheat Fusarium gra... 44 0.025
gb|BQ239090.1|BQ239090 TaE05037C12R TaE05 Triticum aestivum... 44 0.025
gb|AL826179.1|AL826179 AL826179 p:436 Triticum aestivum cDN... 44 0.025
gb|BQ839103.1|BQ839103 WHE3589_D04_H07ZS Wheat developing g... 44 0.025
gb|BQ841668.1|BQ841668 WHE2983_G01_M01ZS Wheat dormant embr... 44 0.025
gb|CA597386.1|CA597386 wpa1c.pk016.o1 wpa1c Triticum aestiv... 44 0.025
gb|CA699846.1|CA699846 wlk8.pk0023.b8 wlk8 Triticum aestivu... 44 0.025
gb|CA708426.1|CA708426 wdk2c.pk009.g16 wdk2c Triticum aesti... 44 0.025
gb|CD885826.1|CD885826 G118.100J07F010507 G118 Triticum aes... 44 0.025
gb|CK205376.1|CK205376 FGAS016854 Triticum aestivum FGAS: L... 44 0.025
gb|CK207810.1|CK207810 FGAS019477 Triticum aestivum FGAS: L... 44 0.025
gb|CN008854.1|CN008854 WHE2645_H07_O13ZE Wheat Fusarium gra... 44 0.025
gb|DR736332.1|DR736332 FGAS081702 Triticum aestivum FGAS: L... 44 0.025
gb|BE422773.1|BE422773 WHE0058_A04_B08ZS Wheat endosperm cD... 42 0.099
gb|BF482306.1|BF482306 WHE1797_B09_D17ZS Wheat pre-anthesis... 42 0.099
gb|BI751423.1|BI751423 Ta01_19h02_R Ta01_AAFC_ECORC_Fusariu... 42 0.099
gb|BJ217471.1|BJ217471 BJ217471 Y. Ogihara unpublished cDNA... 42 0.099
gb|BJ292999.1|BJ292999 BJ292999 Y. Ogihara unpublished cDNA... 42 0.099
gb|BQ483140.1|BQ483140 WHE3505_B03_C05ZS Wheat unstressed r... 42 0.099
gb|CA605287.1|CA605287 wr1.pk0052.c12 wr1 Triticum aestivum... 42 0.099
gb|CA728894.1|CA728894 wdi1c.pk005.f18 wdi1c Triticum aesti... 42 0.099
gb|CA741730.1|CA741730 wia1c.pk003.p2 wia1c Triticum aestiv... 42 0.099
gb|CD895565.1|CD895565 G174.100D06F010705 G174 Triticum aes... 42 0.099
gb|CD903893.1|CD903893 G356.111M15F010919 G356 Triticum aes... 42 0.099
gb|CV782336.1|CV782336 FGAS076749 Triticum aestivum FGAS: L... 42 0.099
gb|DR738629.1|DR738629 FGAS083846 Triticum aestivum FGAS: L... 42 0.099
gb|BE403956.1|BE403956 WHE0415_C07_F13ZS Wheat etiolated se... 40 0.39
gb|BE498763.1|BE498763 WHE0965_B09_D17ZS Wheat pre-anthesis... 40 0.39
gb|BE499408.1|BE499408 WHE0974_G07_N14ZS Wheat pre-anthesis... 40 0.39
gb|BG606555.1|BG606555 WHE2957_H02_P03ZS Wheat dormant embr... 40 0.39
gb|BM138437.1|BM138437 WHE0497_F10_L19ZS Wheat Fusarium gra... 40 0.39
gb|BJ208157.1|BJ208157 BJ208157 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ208342.1|BJ208342 BJ208342 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ245298.1|BJ245298 BJ245298 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ251169.1|BJ251169 BJ251169 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ256530.1|BJ256530 BJ256530 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ318868.1|BJ318868 BJ318868 Y. Ogihara unpublished cDNA... 40 0.39
gb|BQ239435.1|BQ239435 TaE05031A11R TaE05 Triticum aestivum... 40 0.39
gb|BQ805763.1|BQ805763 WHE3570_G03_N06ZS Wheat developing g... 40 0.39
gb|BQ807160.1|BQ807160 WHE3587_E04_I07ZS Wheat developing g... 40 0.39
gb|BQ807275.1|BQ807275 WHE3588_H04_O08ZS Wheat developing g... 40 0.39
gb|BU100642.1|BU100642 WHE3355_H01_O01ZS Chinese Spring alu... 40 0.39
gb|BJ208077.1|BJ208077 BJ208077 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ208588.1|BJ208588 BJ208588 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ215355.1|BJ215355 BJ215355 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ215856.1|BJ215856 BJ215856 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ224620.1|BJ224620 BJ224620 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ234533.1|BJ234533 BJ234533 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ249432.1|BJ249432 BJ249432 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ264392.1|BJ264392 BJ264392 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ268683.1|BJ268683 BJ268683 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ270775.1|BJ270775 BJ270775 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ273620.1|BJ273620 BJ273620 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ276037.1|BJ276037 BJ276037 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ276044.1|BJ276044 BJ276044 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ281105.1|BJ281105 BJ281105 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ288382.1|BJ288382 BJ288382 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ289022.1|BJ289022 BJ289022 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ290443.1|BJ290443 BJ290443 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ291658.1|BJ291658 BJ291658 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ310884.1|BJ310884 BJ310884 Y. Ogihara unpublished cDNA... 40 0.39
gb|BJ316076.1|BJ316076 BJ316076 Y. Ogihara unpublished cDNA... 40 0.39
gb|CA485784.1|CA485784 WHE4323_A08_B15ZS Wheat meiotic anth... 40 0.39
gb|CA595041.1|CA595041 wpa1c.pk008.h13 wpa1c Triticum aesti... 40 0.39
gb|CA597655.1|CA597655 wpa1c.pk015.j14 wpa1c Triticum aesti... 40 0.39
gb|CA632188.1|CA632188 wle1n.pk0062.d12 wle1n Triticum aest... 40 0.39
gb|CA633071.1|CA633071 wle1n.pk0065.e4 wle1n Triticum aesti... 40 0.39
gb|CA703908.1|CA703908 wdk1c.pk009.a20 wdk1c Triticum aesti... 40 0.39
gb|CA713519.1|CA713519 wdk3c.pk019.a15 wdk3c Triticum aesti... 40 0.39
gb|CD373541.1|CD373541 WHE0415_C07_F13ZT CS wheat etiolated... 40 0.39
gb|CD891593.1|CD891593 G118.117N01F010724 G118 Triticum aes... 40 0.39
gb|CD915164.1|CD915164 G550.125E21F010713 G550 Triticum aes... 40 0.39
gb|CD915621.1|CD915621 G550.126O03F010716 G550 Triticum aes... 40 0.39
gb|CD915622.1|CD915622 G550.126O03R010920 G550 Triticum aes... 40 0.39
gb|CD920343.1|CD920343 G608.116L23F010912 G608 Triticum aes... 40 0.39
gb|CD927249.1|CD927249 GR45.101I12F010315 GR45 Triticum aes... 40 0.39
gb|CD928283.1|CD928283 GR45.104H14F010319 GR45 Triticum aes... 40 0.39
gb|CD928528.1|CD928528 GR45.105C02F010316 GR45 Triticum aes... 40 0.39
gb|CD928757.1|CD928757 GR45.105N21R010608 GR45 Triticum aes... 40 0.39
gb|CD930576.1|CD930576 GR45.111L19F010418 GR45 Triticum aes... 40 0.39
gb|CD930909.1|CD930909 GR45.112N09F010418 GR45 Triticum aes... 40 0.39
gb|CD931237.1|CD931237 GR45.113N21F010419 GR45 Triticum aes... 40 0.39
gb|CD933822.1|CD933822 GR45.122B21F010721 GR45 Triticum aes... 40 0.39
gb|CD934740.1|CD934740 OV.001M19F000918 OV Triticum aestivu... 40 0.39
gb|CD934741.1|CD934741 OV.001M19R000929 OV Triticum aestivu... 40 0.39
gb|CK205231.1|CK205231 FGAS016690 Triticum aestivum FGAS: L... 40 0.39
gb|CK205323.1|CK205323 FGAS016793 Triticum aestivum FGAS: L... 40 0.39
gb|CK206588.1|CK206588 FGAS018187 Triticum aestivum FGAS: L... 40 0.39
gb|CK211456.1|CK211456 FGAS023301 Triticum aestivum FGAS: L... 40 0.39
gb|AJ611557.1|AJ611557 AJ611557 Triticum turgidum subsp. du... 40 0.39
gb|CN008687.1|CN008687 WHE2644_A02_B04ZE Wheat Fusarium gra... 40 0.39
gb|CN010186.1|CN010186 WHE3867_G03_M05ZS Wheat Fusarium gra... 40 0.39
gb|CN010203.1|CN010203 WHE3867_H08_O15ZS Wheat Fusarium gra... 40 0.39
gb|DR738422.1|DR738422 FGAS083639 Triticum aestivum FGAS: L... 40 0.39
gb|AY543536.1| Triticum aestivum expansin EXPB1 mRNA, compl... 40 0.39
gb|AY543537.1| Triticum aestivum expansin EXPB2 mRNA, compl... 40 0.39
gb|AY543538.1| Triticum aestivum expansin EXPB3 mRNA, compl... 40 0.39
>gb|CA616648.1|CA616648 wl1n.pk0008.b4 wl1n Triticum aestivum cDNA clone wl1n.pk0008.b4 5'
end, mRNA sequence
Length = 508
Score = 605 bits (305), Expect = e-171
Identities = 316/319 (99%), Gaps = 1/319 (0%)
Strand = Plus / Minus
Query: 1030 gccgtagacagtcggcgatggcgtgggtgtagctgtgtggtttcttctggcggccacagg 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gccgtagacagtcggcgatggcgtgggtgtagctgtgtggtttcttctggcggccacagg 259
Query: 1090 cgccggcttgtagctgcccgtgaccggttttggcttcggcttgaccggccgcctgtagct 1149
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 258 cgccggcttgtagctgcccgtgaccggttttggcttcggcttnaccggccgcctgtagct 199
Query: 1150 gcccggcttcggcttgggtttgttgagctttcgggtgcaagcaatggggctcactaggag 1209
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 198 gcccggcttcggcttgggtttgttgagctttcgggtncaagcaatggggctcactaggag 139
Query: 1210 tgagaggaccaccactgcagccagcagcaatgtccaaagcttcgccattgctgctgtttt 1269
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 138 tgagaggaccaccactgcagccagcagcaatgtccaaag-ttcgccattgctgctgtttt 80
Query: 1270 taagctcgaccggagttcacaactttcagaggagtatatagaagatatgtatacgacctt 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 taagctcgaccggagttcacaactttcagaggagtatatagaagatatgtatacgacctt 20
Query: 1330 attagtagctcgattgttc 1348
|||||||||||||||||||
Sbjct: 19 attagtagctcgattgttc 1
Score = 87.7 bits (44), Expect = 2e-015
Identities = 51/52 (98%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 300 acacgccatccacttgtcggtatttctcttttcaggggtagttgaccaagga 351
|||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 379 acacgccatccacttgtcggtatt-ctcttttcaggggtagttgaccaagga 329
>dbj|AB158404.1| Triticum aestivum expB mRNA for putative beta-expansin, complete
cds
Length = 1247
Score = 280 bits (141), Expect = 2e-073
Identities = 348/417 (83%)
Strand = Plus / Minus
Query: 331 tcaggggtagttgaccaaggagcggtaggtcttgccgggcttccacgcggccgggatggc 390
|||||||||||| |||| ||||||||| || |||| |||||| ||| |||||| |
Sbjct: 958 tcaggggtagttcaccagggagcggtacgtggccccggccttccagttggcggggatgac 899
Query: 391 gttgttggcgacgagcaccctgcgggagtcggaggtgagccggagcccgaacggcgcttt 450
||||||| ||| ||| ||||| |||||||||||||||||||||| ||| || ||
Sbjct: 898 gttgttgatgaccagcttcctgccggagtcggaggtgagccggagcgagaagggggcgcg 839
Query: 451 gagcttcctgccgttgttgaggcgccacgtggcgccccagttgtgcgccataggagtcca 510
||| |||||| ||||||||||||||| |||||||||| |||||||| || |||||
Sbjct: 838 cagccgcctgccattgttgaggcgccacagcgcgccccagtcctgcgccatgggcgtcca 779
Query: 511 gacgccgctgccggcctccatgaggtccacggcgctgaggtcgccgtcgtcgtcctcgaa 570
| ||||||||||||||||| ||||| |||| || |||||||||||||||||||||||||
Sbjct: 778 ggcgccgctgccggcctccttgagggccactgccttgaggtcgccgtcgtcgtcctcgaa 719
Query: 571 ctcgatgagcacgtcgaagtagtacgggttcgcgccctgatccaccttgaacgcgatgtt 630
|||||| || | ||||||| | ||||| |||||||| |||||| |||| || |||||
Sbjct: 718 ctcgatcagggtcttgaagtagaaggggttggcgccctggtccaccctgaaggcaatgtt 659
Query: 631 gacgccggtgtacttgcacggcaccctcctgtacaggatcctgagcacgccgccagcgcg 690
|||||||| ||||||||| ||||||||| ||||| | ||||||| || ||||| |||||
Sbjct: 658 gacgccggggtacttgcatggcaccctcttgtactgcatcctgatgaccccgccggcgcg 599
Query: 691 gagcttgtcggccatgccgggccgggccatggcgcccatggcggtgccgctcatgtc 747
|||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 598 gagcttgtcggccatgccgggcttcgccatggcgcccagggcggtgccgctcatgtc 542
Score = 129 bits (65), Expect = 5e-028
Identities = 182/221 (82%)
Strand = Plus / Minus
Query: 789 ggtcggtgattacgatggtcacgggctggccggagcacgcggcgttggtcgtgcatttca 848
|||||||||| || | |||||| |||| |||||||| || | |||| |||||||||| |
Sbjct: 500 ggtcggtgatcaccacggtcacaggcttcccggagcaggccgagttgctcgtgcatttaa 441
Query: 849 cctcgtagcaggcgccgcagccctcgcctcccctgtacagtggcgtgctcccggcggcga 908
| || ||||| ||||||||||||| ||| || || |||| |||| ||||||||||||||
Sbjct: 440 catcatagcacgcgccgcagcccttgcccgccatgaacagaggcgagctcccggcggcga 381
Query: 909 tcatcgagtcgaatggcttctttccgacggccgtctggtagccgcacgcgccgccgtcgc 968
||||||| ||| ||| | ||||| || ||||||||||| ||||| ||||||||||
Sbjct: 380 tcatcgacgagaacggccggtgcccgacagcggtctggtagccacacgctccgccgtcgc 321
Query: 969 tcccgtcgccgttggtcgcgccgtagtacgtggcgccggcg 1009
||||||||||||||| |||||| |||||||||||||||
Sbjct: 320 tcccgtcgccgttggggttgccgtaatacgtggcgccggcg 280
Score = 44.1 bits (22), Expect = 0.025
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1174 gagctttcgggtgcaagcaatggggctcac 1203
|||||| |||| ||||||||||||||||||
Sbjct: 175 gagcttgcgggagcaagcaatggggctcac 146
>gb|CK211529.1|CK211529 FGAS023376 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1151
Score = 268 bits (135), Expect = 9e-070
Identities = 348/418 (83%), Gaps = 1/418 (0%)
Strand = Plus / Plus
Query: 331 tcaggggtagttgaccaaggagcggtaggtcttgccgggcttccacgcggccgggatggc 390
|||||||||||| |||| ||||||||| || |||| |||||| ||| |||||| |
Sbjct: 360 tcaggggtagttcaccagggagcggtacgtggccccggccttccagttggcggggatgac 419
Query: 391 gttgttggcgacgagcaccctgcgggagtcggaggtgagccggagcccgaacggcgcttt 450
||||||| |||| ||| ||||| |||||||||||||||||||||| ||| || ||
Sbjct: 420 gttgttgacgaccagcttcctgccggagtcggaggtgagccggagcgagaagggggcgcg 479
Query: 451 gagcttcctgccgttgttgaggcgccacgtggcgccccagttgtgcgccataggagtcca 510
||| |||||| ||||||||||||||| |||||||||| |||||||| || |||||
Sbjct: 480 cagccgcctgccattgttgaggcgccacagcgcgccccagtcctgcgccatgggcgtcca 539
Query: 511 gacgccgctgccggcctccatgaggtccacggcgctgaggtcgccgtcgtcgtcctcgaa 570
| ||||||||||||||||| ||||| |||| || |||||||||||||||||||||||||
Sbjct: 540 ggcgccgctgccggcctccttgagggccactgccttgaggtcgccgtcgtcgtcctcgaa 599
Query: 571 ctcgatgagcacgtcgaagtagtacgggttcgcgccctgatccaccttgaacgcgatgtt 630
|||||| || | ||||||| | ||||| |||||||| |||||| |||| || |||||
Sbjct: 600 ctcgatcagggtcttgaagtagaaggggttggcgccctggtccaccctgaaggcaatgtt 659
Query: 631 gacgccggtgtacttgcacggcaccctcctgtacaggatcctgagcacgccgccagcgcg 690
|||||||| ||||||||| ||||||||| ||||| | ||||||| || ||||| |||||
Sbjct: 660 gacgccggggtacttgcatggcaccctcttgtactgcatcctgatgaccccgccggcgcg 719
Query: 691 gagcttgtcggccatgccgggc-cgggccatggcgcccatggcggtgccgctcatgtc 747
||||||||||| |||||||||| | |||||||||||| ||||||||||||||||||
Sbjct: 720 gagcttgtcggncatgccgggctttgcccatggcgcccagggcggtgccgctcatgtc 777
>gb|CA600236.1|CA600236 waw1c.pk006.l17 waw1c Triticum aestivum cDNA clone waw1c.pk006.l17
5' end, mRNA sequence
Length = 640
Score = 244 bits (123), Expect = 1e-062
Identities = 294/351 (83%)
Strand = Plus / Minus
Query: 383 gggatggcgttgttggcgacgagcaccctgcgggagtcggaggtgagccggagcccgaac 442
|||||| |||||||| |||| ||| ||||| |||||||||||||||||||||| |||
Sbjct: 362 gggatgacgttgttgacgaccagcttcctgccggagtcggaggtgagccggagcgagaag 303
Query: 443 ggcgctttgagcttcctgccgttgttgaggcgccacgtggcgccccagttgtgcgccata 502
|| || ||| |||||| ||||||||||||||| |||||||||| ||||||||
Sbjct: 302 ggggcgcgcagccgcctgccattgttgaggcgccacagcgcgccccagtcttgcgccatg 243
Query: 503 ggagtccagacgccgctgccggcctccatgaggtccacggcgctgaggtcgccgtcgtcg 562
|| |||||| ||||||||||||||||| ||||| |||| || |||||||||||||||||
Sbjct: 242 ggcgtccaggcgccgctgccggcctccttgagggccactgccttgaggtcgccgtcgtcg 183
Query: 563 tcctcgaactcgatgagcacgtcgaagtagtacgggttcgcgccctgatccaccttgaac 622
|||||||||||||| || | ||||||| | ||||| |||||||| |||||| ||||
Sbjct: 182 tcctcgaactcgatcagggtcttgaagtagaaggggttggcgccctggtccaccctgaag 123
Query: 623 gcgatgttgacgccggtgtacttgcacggcaccctcctgtacaggatcctgagcacgccg 682
|| ||||||||||||| ||||||||| ||||||||| ||||| | ||| ||| || |||
Sbjct: 122 gcaatgttgacgccggggtacttgcatggcaccctcttgtactgcatcttgatgaccccg 63
Query: 683 ccagcgcggagcttgtcggccatgccgggccgggccatggcgcccatggcg 733
|| ||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 62 ccggcgcggagcttgtcggccatgccgggcttcgccatggcgcccagggcg 12
>gb|AY543543.1| Triticum aestivum expansin EXPB9 mRNA, complete cds
Length = 1060
Score = 240 bits (121), Expect = 2e-061
Identities = 343/417 (82%)
Strand = Plus / Minus
Query: 331 tcaggggtagttgaccaaggagcggtaggtcttgccgggcttccacgcggccgggatggc 390
|||||||||||| |||| ||||||||| || |||| |||||| ||| |||||| |
Sbjct: 922 tcaggggtagttcaccagggagcggtacgtggccccggccttccagttggcggggatgac 863
Query: 391 gttgttggcgacgagcaccctgcgggagtcggaggtgagccggagcccgaacggcgcttt 450
|||| || |||||||| ||||| ||||||||| |||||||||||| ||| || ||
Sbjct: 862 gttgctgacgacgagcttcctgccggagtcggacgtgagccggagcgagaagggggcgcg 803
Query: 451 gagcttcctgccgttgttgaggcgccacgtggcgccccagttgtgcgccataggagtcca 510
|||| |||||| | ||||||||||||| |||||||||| || ||||| || |||||
Sbjct: 802 cagctgcctgccctcgttgaggcgccacaatgcgccccagtcctgtgccatgggcgtcca 743
Query: 511 gacgccgctgccggcctccatgaggtccacggcgctgaggtcgccgtcgtcgtcctcgaa 570
| ||||||||||||||||| ||||| ||||||| |||||||||||||||||||||| ||
Sbjct: 742 ggcgccgctgccggcctccttgagggccacggccttgaggtcgccgtcgtcgtcctcaaa 683
Query: 571 ctcgatgagcacgtcgaagtagtacgggttcgcgccctgatccaccttgaacgcgatgtt 630
|||||| || | |||||| | ||||| | |||||| |||||| |||| || |||||
Sbjct: 682 ctcgatcagggtcttgaagtaaaaggggttggagccctggtccaccctgaaggcaatgtt 623
Query: 631 gacgccggtgtacttgcacggcaccctcctgtacaggatcctgagcacgccgccagcgcg 690
|||||| | ||||||||| ||||||||| ||||| | ||||||| || ||||| |||||
Sbjct: 622 gacgccagggtacttgcatggcaccctcttgtactgcatcctgatgacaccgccggcgcg 563
Query: 691 gagcttgtcggccatgccgggccgggccatggcgcccatggcggtgccgctcatgtc 747
|||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||
Sbjct: 562 gagcttgtcggccatgccaggcttcgccatggcgcccagggcggtgccgctcatgtc 506
Score = 121 bits (61), Expect = 1e-025
Identities = 181/221 (81%)
Strand = Plus / Minus
Query: 789 ggtcggtgattacgatggtcacgggctggccggagcacgcggcgttggtcgtgcatttca 848
|||||||||| |||||| |||| |||| |||||||| || | |||| |||||||||| |
Sbjct: 464 ggtcggtgatgacgatgttcacaggcttcccggagcaggccgagttgctcgtgcatttaa 405
Query: 849 cctcgtagcaggcgccgcagccctcgcctcccctgtacagtggcgtgctcccggcggcga 908
| || ||||| ||||||||||||| ||| || || |||| |||| ||||||||||||||
Sbjct: 404 catcatagcacgcgccgcagcccttgcccgccatgaacagaggcgagctcccggcggcga 345
Query: 909 tcatcgagtcgaatggcttctttccgacggccgtctggtagccgcacgcgccgccgtcgc 968
||||||| ||| ||| | || || || || |||||||| ||||| ||||||||||
Sbjct: 344 tcatcgacgagaacggccggtgcccaacagcggtttggtagccacacgctccgccgtcgc 285
Query: 969 tcccgtcgccgttggtcgcgccgtagtacgtggcgccggcg 1009
||||||||||||||| |||||| |||||||||||||||
Sbjct: 284 tcccgtcgccgttggggttgccgtaatacgtggcgccggcg 244
>gb|BE499051.1|BE499051 WHE0960_G11_M22ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE0960_G11_M22, mRNA sequence
Length = 528
Score = 210 bits (106), Expect = 2e-052
Identities = 238/282 (84%)
Strand = Plus / Minus
Query: 466 gttgaggcgccacgtggcgccccagttgtgcgccataggagtccagacgccgctgccggc 525
||||||||||||| |||||||||| || ||||| || || ||| |||||||||||||
Sbjct: 528 gttgaggcgccacaatgcgccccagtcctgtgccatgggcgttcaggcgccgctgccggc 469
Query: 526 ctccatgaggtccacggcgctgaggtcgccgtcgtcgtcctcgaactcgatgagcacgtc 585
|||| ||||| ||||||| |||||||||||||||||||||| |||||||| || |
Sbjct: 468 ctccttgagggccacggccttgaggtcgccgtcgtcgtcctcaaactcgatcagggtctt 409
Query: 586 gaagtagtacgggttcgcgccctgatccaccttgaacgcgatgttgacgccggtgtactt 645
||||||| | ||||| | |||||| |||||| |||| || ||||||||||| | ||||||
Sbjct: 408 gaagtagaaggggttggagccctggtccaccctgaaggcaatgttgacgccagggtactt 349
Query: 646 gcacggcaccctcctgtacaggatcctgagcacgccgccagcgcggagcttgtcggccat 705
||| ||||||||| ||||| | ||||||| || ||||| ||||||||||||||||||||
Sbjct: 348 gcatggcaccctcttgtactgcatcctgatgacaccgccggcgcggagcttgtcggccat 289
Query: 706 gccgggccgggccatggcgcccatggcggtgccgctcatgtc 747
||| ||| ||||||||||||| ||||||||||||||||||
Sbjct: 288 gccaggcttcgccatggcgcccagggcggtgccgctcatgtc 247
Score = 117 bits (59), Expect = 2e-024
Identities = 161/195 (82%)
Strand = Plus / Minus
Query: 789 ggtcggtgattacgatggtcacgggctggccggagcacgcggcgttggtcgtgcatttca 848
|||||||||| ||||||||||| |||| |||||||| || | |||| |||||||||| |
Sbjct: 205 ggtcggtgatgacgatggtcacaggcttcccggagcaggccgagttgctcgtgcatttaa 146
Query: 849 cctcgtagcaggcgccgcagccctcgcctcccctgtacagtggcgtgctcccggcggcga 908
| || ||||| ||||||||||||| ||| || || |||| |||| ||||||||||||||
Sbjct: 145 catcatagcacgcgccgcagcccttgcccgccatgaacagaggcgagctcccggcggcga 86
Query: 909 tcatcgagtcgaatggcttctttccgacggccgtctggtagccgcacgcgccgccgtcgc 968
||||||| ||| ||| | || || || || |||||||| ||||| ||||||||||
Sbjct: 85 tcatcgacgagaacggccggtgcccaacagcggtttggtagccacacgctccgccgtcgc 26
Query: 969 tcccgtcgccgttgg 983
|||||||||||||||
Sbjct: 25 tcccgtcgccgttgg 11
>gb|DR739450.1|DR739450 FGAS084667 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1061
Score = 204 bits (103), Expect = 1e-050
Identities = 426/529 (80%), Gaps = 5/529 (0%)
Strand = Plus / Minus
Query: 482 gcgccccagttgtgcgccataggagtccagacgccgctgccggcctccatgaggtccacg 541
||||||||||| |||||||| || |||||| ||||| | | |||||||||||||||||
Sbjct: 828 gcgccccagttttgcgccatgggcgtccaggtgccgcagttgtcctccatgaggtccacg 769
Query: 542 gcgctgaggtcgccgtcgtcgtcctcgaactcgatgagcacgtcgaagtagtacgggttc 601
||| ||||||||||||||||||||||||||||||| || || || | |||| |||||
Sbjct: 768 gcgttgaggtcgccgtcgtcgtcctcgaactcgatcaggacctccagtnagtaggggttg 709
Query: 602 gcgccctgatccaccttgaacgcgatgttgacgccggtgtacttgca-cggcaccctcct 660
| |||||| ||||||||||| || ||||| | ||| | |||| |||| ||||||||| |
Sbjct: 708 gagccctggtccaccttgaaggcaatgttcatgccagggtac-tgcatgggcaccctctt 650
Query: 661 gtacaggatcctgagcacgccgccagcgcggagcttgtcggccatgccgggccgggccat 720
|||| ||||| ||| | ||||| || ||||| |||||||||||||| ||| |||||
Sbjct: 649 gtactggatcttgatgataccgccggcccggagtttgtcggccatgccaggcttcgccat 590
Query: 721 ggcgcccatggcggtgccgctcatgtcaaagtgctcgacctcgccggggaa--cag-ccc 777
||||||||||| ||||||||||||||| ||||| || |||| ||| || | | | |||
Sbjct: 589 ggcgcccatggaggtgccgctcatgtcgaagtgggcggcctcaccgaggcaggcggcccc 530
Query: 778 gccaggggactggtcggtgattacgatggtcacgggctggccggagcacgcggcgttggt 837
| | ||| ||| ||||||||| |||| ||| | |||||||||||||| || ||||
Sbjct: 529 ggcggggcactcgtcggtgatgacgacggttgccggctggccggagcatgcctggttgcc 470
Query: 838 cgtgcatttcacctcgtagcaggcgccgcagccctcgcctcccctgtacagtggcgtgct 897
|||||||| ||||||||||| || |||||||||| ||| | ||||| || | || | |
Sbjct: 469 tgtgcatttgacctcgtagcacgctccgcagcccttgccatctctgtagagcgacgggtt 410
Query: 898 cccggcggcgatcatcgagtcgaatggcttctttccgacggccgtctggtagccgcacgc 957
|||||||||||||||||| ||| ||| || || || || |||||||||| |||||
Sbjct: 409 cccggcggcgatcatcgacgagaacggccggttccccacagcgctctggtagccacacgc 350
Query: 958 gccgccgtcgctcccgtcgccgttggtcgcgccgtagtacgtggcgccg 1006
||| |||||||| ||||||||||||| |||||||| ||||| ||||||
Sbjct: 349 gccaccgtcgcttccgtcgccgttgggggcgccgtaatacgtcgcgccg 301
>gb|CK201768.1|CK201768 FGAS010288 Triticum aestivum FGAS: Library 3 Gate 6 Triticum aestivum
cDNA, mRNA sequence
Length = 809
Score = 180 bits (91), Expect = 2e-043
Identities = 294/359 (81%), Gaps = 2/359 (0%)
Strand = Plus / Minus
Query: 652 caccctcctgtacaggatcctgagcacgccgccagcgcggagcttgtcggccatgccggg 711
||||||| ||||| | ||||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 753 caccctcttgtactgcatcctgatgacaccgccggcgcggagcttgtcggccatgccggg 694
Query: 712 ccgggccatggcgcccatggcggtgccgctcatgtcaaagt-gctcgacctcgccgggga 770
| ||||||||||||| |||||||||||||||||| |||| || || ||||||||||
Sbjct: 693 cttcgccatggcgcccagggcggtgccgctcatgtcgaagtggcacg-gctcgccggggt 635
Query: 771 acagcccgccaggggactggtcggtgattacgatggtcacgggctggccggagcacgcgg 830
| || ||| ||| | |||||||||| || | |||||| |||| |||||||| || |
Sbjct: 634 agaggttgccggggctcaggtcggtgatgaccacggtcacaggcttcccggagcaggccg 575
Query: 831 cgttggtcgtgcatttcacctcgtagcaggcgccgcagccctcgcctcccctgtacagtg 890
|||| |||||||||| || || ||||| ||||||||||||| ||| || || |||| |
Sbjct: 574 agttgctcgtgcatttaacatcatagcacgcgccgcagcccttgcccgccatgaacagag 515
Query: 891 gcgtgctcccggcggcgatcatcgagtcgaatggcttctttccgacggccgtctggtagc 950
| | ||||||||||||||||||||| ||| ||| | || || || ||||||||||
Sbjct: 514 gggagctcccggcggcgatcatcgacgagaacggccggtgccctacagcggtctggtagc 455
Query: 951 cgcacgcgccgccgtcgctcccgtcgccgttggtcgcgccgtagtacgtggcgccggcg 1009
||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 454 cgcacgctccgccgtcgctcccgtcgccgttggggttgccgtaatacgtggcgccggcg 396
Score = 46.1 bits (23), Expect = 0.006
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 1174 gagctttcgggtgcaagcaatggggctcactaggagtgagaggacca 1220
|||||| |||| |||||||||||||||||| || || ||||| ||||
Sbjct: 291 gagcttgcgggagcaagcaatggggctcacaagaagcgagagcacca 245
>gb|DR738434.1|DR738434 FGAS083651 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1062
Score = 172 bits (87), Expect = 4e-041
Identities = 227/268 (84%), Gaps = 5/268 (1%)
Strand = Plus / Minus
Query: 482 gcgccccagttgtgcgccataggagtccagacgccgctgccggcctccatgaggtccacg 541
|||||||||| |||||||| || |||||| ||||||||||||||||| ||||| ||||
Sbjct: 885 gcgccccagtcctgcgccat-ggcgtccaggcgccgctgccggcctccttgagggccact 827
Query: 542 gcgctgaggtcgccgtcgtcgtcctcgaactcgatgagcacgtcgaagtagtacgggttc 601
| ||||| |||||||||||||||||||||||||| || | ||||||| | |||||
Sbjct: 826 gncctgagttcgccgtcgtcgtcctcgaactcgatcaggtctnngaagtagaaggggttg 767
Query: 602 gcgccctgatccaccttgaacgcgatgttgacgccggtg-tacttgcacgg-caccctcc 659
|||||||| |||||| |||| || |||| |||||||| | |||| ||| || |||||||
Sbjct: 766 gcgccctggtccaccctgaaggcaatgt-gacgccgggggtact-gcatgggcaccctct 709
Query: 660 tgtacaggatcctgagcacgccgccagcgcggagcttgtcggccatgccgggccgggcca 719
||||| | ||||||| || ||||| ||||||||||||||||||||||||||| ||||
Sbjct: 708 tgtactgcatcctgatgaccccgccggcgcggagcttgtcggccatgccgggcttcgcca 649
Query: 720 tggcgcccatggcggtgccgctcatgtc 747
||||||||| ||||||||||||||||||
Sbjct: 648 tggcgcccagggcggtgccgctcatgtc 621
Score = 129 bits (65), Expect = 5e-028
Identities = 182/221 (82%)
Strand = Plus / Minus
Query: 789 ggtcggtgattacgatggtcacgggctggccggagcacgcggcgttggtcgtgcatttca 848
|||||||||| || | |||||| |||| |||||||| || | |||| |||||||||| |
Sbjct: 579 ggtcggtgatcaccacggtcacaggcttcccggagcaggccgagttgctcgtgcatttaa 520
Query: 849 cctcgtagcaggcgccgcagccctcgcctcccctgtacagtggcgtgctcccggcggcga 908
| || ||||| ||||||||||||| ||| || || |||| |||| ||||||||||||||
Sbjct: 519 catcatagcacgcgccgcagcccttgcccgccatgaacagaggcgagctcccggcggcga 460
Query: 909 tcatcgagtcgaatggcttctttccgacggccgtctggtagccgcacgcgccgccgtcgc 968
||||||| ||| ||| | ||||| || ||||||||||| ||||| ||||||||||
Sbjct: 459 tcatcgacgagaacggccggtgcccgacagcggtctggtagccacacgctccgccgtcgc 400
Query: 969 tcccgtcgccgttggtcgcgccgtagtacgtggcgccggcg 1009
||||||||||||||| |||||| |||||||||||||||
Sbjct: 399 tcccgtcgccgttggggttgccgtaatacgtggcgccggcg 359
Score = 44.1 bits (22), Expect = 0.025
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1174 gagctttcgggtgcaagcaatggggctcac 1203
|||||| |||| ||||||||||||||||||
Sbjct: 254 gagcttgcgggagcaagcaatggggctcac 225
>gb|AL825524.1|AL825524 AL825524 p:335 Triticum aestivum cDNA clone C04_p335_plate_18, mRNA
sequence
Length = 499
Score = 168 bits (85), Expect = 6e-040
Identities = 231/277 (83%), Gaps = 2/277 (0%)
Strand = Plus / Minus
Query: 640 gtacttgcacggcaccctcctgtacaggatcctgagcacgccgccagcgcggagcttgtc 699
||||||||| ||||||||| ||||| | |||||||| || ||||| ||||||||||||||
Sbjct: 498 gtacttgcatggcaccctcttgtacggcatcctgaggacaccgccggcgcggagcttgtc 439
Query: 700 ggccatgccgggccgggccatggcgcccatggcggtgccgctcatgtc-aaagtgctcga 758
||||||||| ||| ||||||||||||| |||||||||||||||||| ||| || ||
Sbjct: 438 ggccatgccaggcttcgccatggcgcccagggcggtgccgctcatgtcgaaatggcacg- 380
Query: 759 cctcgccggggaacagcccgccaggggactggtcggtgattacgatggtcacgggctggc 818
|||||||||| | ||| ||| ||| | |||||||||| ||||||||||| |||| |
Sbjct: 379 gctcgccggggtagagctagccggggctcaggtcggtgatgacgatggtcacaggcttcc 320
Query: 819 cggagcacgcggcgttggtcgtgcatttcacctcgtagcaggcgccgcagccctcgcctc 878
||||||| || | |||| ||||||||| || || ||||| ||||||||||||| |||
Sbjct: 319 cggagcaggccgagttgctcgtgcattcaacatcatagcacgcgccgcagcccttgcccg 260
Query: 879 ccctgtacagtggcgtgctcccggcggcgatcatcga 915
|| || |||| |||| |||||||||||||||||||||
Sbjct: 259 ccatgaacagaggcgagctcccggcggcgatcatcga 223
Score = 54.0 bits (27), Expect = 3e-005
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 945 ggtagccgcacgcgccgccgtcgctcccgtcgccgttgg 983
||||||| ||||| ||||||||||||| |||||||||||
Sbjct: 190 ggtagccacacgctccgccgtcgctccagtcgccgttgg 152
>gb|CA627362.1|CA627362 wl1n.pk0116.f11 wl1n Triticum aestivum cDNA clone wl1n.pk0116.f11 5'
end, mRNA sequence
Length = 577
Score = 155 bits (78), Expect = 1e-035
Identities = 257/317 (81%)
Strand = Plus / Minus
Query: 692 agcttgtcggccatgccgggccgggccatggcgcccatggcggtgccgctcatgtcaaag 751
||||||||| |||||||||| |||||||||||||||| ||||||||||||||| |||
Sbjct: 402 agcttgtcgnccatgccgggtttcgccatggcgcccatggaggtgccgctcatgtcgaag 343
Query: 752 tgctcgacctcgccggggaacagcccgccaggggactggtcggtgattacgatggtcacg 811
|| | |||| || || | | ||||| ||| ||| ||||||||| || | ||| |
Sbjct: 342 tgagccgcctctgcgaggcagacaccgccggggcactcgtcggtgatgaccacggtggcc 283
Query: 812 ggctggccggagcacgcggcgttggtcgtgcatttcacctcgtagcaggcgccgcagccc 871
|||||||||||||| || | |||| | |||||| ||||||||||||||||||||||||
Sbjct: 282 ggctggccggagcatgccgggttgctgtcgcatttaacctcgtagcaggcgccgcagccc 223
Query: 872 tcgcctcccctgtacagtggcgtgctcccggcggcgatcatcgagtcgaatggcttcttt 931
| ||||||| || |||| | || ||||||||| ||||||||||| ||| || ||
Sbjct: 222 ttgcctcccttgaacagggacgggctcccggccgcgatcatcgacgagaaggggcgctgc 163
Query: 932 ccgacggccgtctggtagccgcacgcgccgccgtcgctcccgtcgccgttggtcgcgccg 991
|||||||| |||||||| |||||||| |||||||| || ||||||||||| | ||||||
Sbjct: 162 ccgacggcggtctggtacccgcacgcaccgccgtcactgccgtcgccgtttggggcgccg 103
Query: 992 tagtacgtggcgccggc 1008
|||||||| ||||||||
Sbjct: 102 tagtacgtcgcgccggc 86
>gb|CV778976.1|CV778976 FGAS073385 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 836
Score = 141 bits (71), Expect = 1e-031
Identities = 297/370 (80%), Gaps = 3/370 (0%)
Strand = Plus / Minus
Query: 640 gtacttgcacggcaccctcctgtacaggatcctgagcacgccgccagcgcggagcttgtc 699
||||||||| ||||||||| ||||| ||||| ||| | ||||| || ||||| |||||
Sbjct: 677 gtacttgcatggcaccctcttgtactggatcttgatgataccgccggcccggagtttgtc 618
Query: 700 ggccatgccgggccgggccatggcgcccatggcggtgccgctcatgtcaaagtgctcgac 759
||||||||| ||| |||||||||||||||| ||||||||||||||| ||||| || |
Sbjct: 617 ggccatgccaggcttcgccatggcgcccatggaggtgccgctcatgtcgaagtgggcggc 558
Query: 760 ctcgccg-gggaacag--cccgccaggggactggtcggtgattacgatggtcacgggctg 816
||| ||| || || | |||| | ||| ||| ||||||||| |||| |||| | |||||
Sbjct: 557 ctcaccgaggcaagcggccccggcggggcactagtcggtgatgacgacggtcgccggctg 498
Query: 817 gccggagcacgcggcgttggtcgtgcatttcacctcgtagcaggcgccgcagccctcgcc 876
||||||||| || |||| |||||||| ||||||||||| || |||||||||| |||
Sbjct: 497 gccggagcatgcctggttgcctgtgcatttaacctcgtagcacgctccgcagcccttgcc 438
Query: 877 tcccctgtacagtggcgtgctcccggcggcgatcatcgagtcgaatggcttctttccgac 936
| ||||| || | || | | ||||||||||||||||| ||| ||| || |||||
Sbjct: 437 atctctgtagagcgacgggttgccggcggcgatcatcgacgagaacggccggttgccgac 378
Query: 937 ggccgtctggtagccgcacgcgccgccgtcgctcccgtcgccgttggtcgcgccgtagta 996
|| |||||||||| |||||||| |||||||| ||||||||||||| |||||||| ||
Sbjct: 377 agcgctctggtagccacacgcgccaccgtcgcttccgtcgccgttgggggcgccgtaata 318
Query: 997 cgtggcgccg 1006
||| ||||||
Sbjct: 317 cgtcgcgccg 308
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1174 gagctttcgggtgcaagcaatggggctcactaggagtgagaggaccacca 1223
|||||| |||| ||||||||||||||||| || ||||||||||| ||||
Sbjct: 218 gagcttgcgggaacaagcaatggggctcacaagaagtgagaggacaacca 169
>gb|CA623443.1|CA623443 wl1n.pk0106.g7 wl1n Triticum aestivum cDNA clone wl1n.pk0106.g7 5'
end, mRNA sequence
Length = 633
Score = 139 bits (70), Expect = 6e-031
Identities = 282/351 (80%), Gaps = 4/351 (1%)
Strand = Plus / Minus
Query: 686 gcgcggagcttgtcggccatgccgggccgggccatggcgcccatggcggtgccgctcatg 745
||||| ||||||||| ||||||||| | |||||||||||||||| |||||||||||||
Sbjct: 386 gcgcgaagcttgtcgnccatgccgg-cttcgccatggcgcccatggaggtgccgctcatg 328
Query: 746 tcaaagtgctcgacctcgccggggaacagcccgccaggggactggtcggtgattacgatg 805
|| ||||| | ||||| || || | | || || ||| ||| ||||||||| || | |
Sbjct: 327 tcgaagtgggccgcctcggcgaggcagacgccaccggggcactcgtcggtgatgaccacg 268
Query: 806 gtcacgggctggccggagcacgcggcgttggtcgtgcatttcacctcgtagcaggcgccg 865
||| | |||| ||||||||| || |||||| | |||||| ||||||||||| ||||||
Sbjct: 267 gtcgccggcttgccggagcatgcagcgttgctgtcgcatttaacctcgtagcaagcgccg 208
Query: 866 cagccctcgcctcccctgtacagtggcgtgctcccggcggcgatcatcgagtcgaatggc 925
|| |||| ||| || || |||| | || ||| ||||||||||||||||| ||| ||
Sbjct: 207 catcccttgccctccttgaacagcgacgggctaccggcggcgatcatcgacgagaaggga 148
Query: 926 ttctttccgacggccgtctggtagccgcacgcgccgccgtcgctcccgtcgccgttggtc 985
|| ||||||||| |||||||||||||||||||||||||| || ||||| || | ||
Sbjct: 147 cgctgtccgacggcggtctggtagccgcacgcgccgccgtcactgccgtctccatcgggt 88
Query: 986 gcgccgtagtacgtggcgccggcgcctgacagccagccaccggggccgtag 1036
|||||||||||||| ||||||||| |||| |||||| |||| |||||||
Sbjct: 87 gcgccgtagtacgtcgcgccggcg---gacaaccagccgccggagccgtag 40
>gb|BE403825.1|BE403825 WHE0420_B05_D10ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0420_B05_D10, mRNA
sequence
Length = 235
Score = 137 bits (69), Expect = 2e-030
Identities = 138/161 (85%)
Strand = Plus / Minus
Query: 586 gaagtagtacgggttcgcgccctgatccaccttgaacgcgatgttgacgccggtgtactt 645
||||||| | ||||| ||||| || ||||||||||| || ||||||||||||| ||||||
Sbjct: 220 gaagtagaaggggttggcgccatggtccaccttgaaggcaatgttgacgccggggtactt 161
Query: 646 gcacggcaccctcctgtacaggatcctgagcacgccgccagcgcggagcttgtcggccat 705
||| |||||||| |||| | ||| ||| || ||||| ||||||||||||||||||||
Sbjct: 160 gcatcgcaccctcttgtaatgcatcgtgatgaccccgccggcgcggagcttgtcggccat 101
Query: 706 gccgggccgggccatggcgcccatggcggtgccgctcatgt 746
||||||| ||||||||||||| |||||||||||||||||
Sbjct: 100 gccgggcttcgccatggcgcccagggcggtgccgctcatgt 60
>gb|CA603882.1|CA603882 wr1.pk0035.g12 wr1 Triticum aestivum cDNA clone wr1.pk0035.g12 5'
end, mRNA sequence
Length = 476
Score = 133 bits (67), Expect = 4e-029
Identities = 142/167 (85%)
Strand = Plus / Minus
Query: 482 gcgccccagttgtgcgccataggagtccagacgccgctgccggcctccatgaggtccacg 541
||||||||||| |||||||| || |||||| ||||| | |||||||||||||||||||
Sbjct: 299 gcgccccagttctgcgccatgggcgtccaggtgccgcagttggcctccatgaggtccacg 240
Query: 542 gcgctgaggtcgccgtcgtcgtcctcgaactcgatgagcacgtcgaagtagtacgggttc 601
||| ||||||||||||||||||||||||| ||||| || || || | |||||| |||||
Sbjct: 239 gcgttgaggtcgccgtcgtcgtcctcgaattcgatcaggacctccaggtagtaggggttg 180
Query: 602 gcgccctgatccaccttgaacgcgatgttgacgccggtgtacttgca 648
| |||||| ||||||||||| || ||||| | ||| | |||||||||
Sbjct: 179 gagccctggtccaccttgaaggcaatgttcatgccagggtacttgca 133
Score = 67.9 bits (34), Expect = 2e-009
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 383 gggatggcgttgttggcgacgagcaccctgcgggagtcggaggtgagccggagc 436
|||||| |||||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct: 404 gggatgacgttgttgacgacgagcttcctgccggagtcggaggtgagccggagc 351
>gb|BQ743467.1|BQ743467 WHE4104_C11_F22ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4104_C11_F22, mRNA sequence
Length = 606
Score = 129 bits (65), Expect = 5e-028
Identities = 182/221 (82%)
Strand = Plus / Minus
Query: 789 ggtcggtgattacgatggtcacgggctggccggagcacgcggcgttggtcgtgcatttca 848
|||||||||| || | |||||| |||| |||||||| || | |||| |||||||||| |
Sbjct: 509 ggtcggtgatcaccacggtcacaggcttcccggagcaggccgagttgctcgtgcatttaa 450
Query: 849 cctcgtagcaggcgccgcagccctcgcctcccctgtacagtggcgtgctcccggcggcga 908
| || ||||| ||||||||||||| ||| || || |||| |||| ||||||||||||||
Sbjct: 449 catcatagcacgcgccgcagcccttgcccgccatgaacagaggcgagctcccggcggcga 390
Query: 909 tcatcgagtcgaatggcttctttccgacggccgtctggtagccgcacgcgccgccgtcgc 968
||||||| ||| ||| | ||||| || ||||||||||| ||||| ||||||||||
Sbjct: 389 tcatcgacgagaacggccggtgcccgacagcggtctggtagccacacgctccgccgtcgc 330
Query: 969 tcccgtcgccgttggtcgcgccgtagtacgtggcgccggcg 1009
||||||||||||||| |||||| |||||||||||||||
Sbjct: 329 tcccgtcgccgttggggttgccgtaatacgtggcgccggcg 289
Score = 79.8 bits (40), Expect = 5e-013
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 692 agcttgtcggccatgccgggccgggccatggcgcccatggcggtgccgctcatgtc 747
||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 606 agcttgtcggccatgccgggcttcgccatggcgcccagggcggtgccgctcatgtc 551
Score = 44.1 bits (22), Expect = 0.025
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1174 gagctttcgggtgcaagcaatggggctcac 1203
|||||| |||| ||||||||||||||||||
Sbjct: 184 gagcttgcgggagcaagcaatggggctcac 155
>gb|BQ838171.1|BQ838171 WHE2907_D03_H05ZS Wheat aluminum-stressed root tip cDNA library
Triticum aestivum cDNA clone WHE2907_D03_H05, mRNA
sequence
Length = 712
Score = 129 bits (65), Expect = 5e-028
Identities = 182/221 (82%)
Strand = Plus / Minus
Query: 789 ggtcggtgattacgatggtcacgggctggccggagcacgcggcgttggtcgtgcatttca 848
|||||||||| ||||||||||| |||| |||||||| || | |||| |||||||||| |
Sbjct: 511 ggtcggtgatgacgatggtcacaggcttcccggagcaggccgagttgctcgtgcatttaa 452
Query: 849 cctcgtagcaggcgccgcagccctcgcctcccctgtacagtggcgtgctcccggcggcga 908
| || ||||| ||||||||||||| ||| || || |||| |||| ||||||||||||||
Sbjct: 451 catcatagcacgcgccgcagcccttgcccgccatgaacagaggcgagctcccggcggcga 392
Query: 909 tcatcgagtcgaatggcttctttccgacggccgtctggtagccgcacgcgccgccgtcgc 968
||||||| ||| ||| | || || || || |||||||| ||||| ||||||||||
Sbjct: 391 tcatcgacgagaacggccggtgcccaacagcggtttggtagccacacgctccgccgtcgc 332
Query: 969 tcccgtcgccgttggtcgcgccgtagtacgtggcgccggcg 1009
||||||||||||||| |||||| |||||||||||||||
Sbjct: 331 tcccgtcgccgttggggttgccgtaatacgtggcgccggcg 291
Score = 123 bits (62), Expect = 3e-026
Identities = 107/122 (87%)
Strand = Plus / Minus
Query: 626 atgttgacgccggtgtacttgcacggcaccctcctgtacaggatcctgagcacgccgcca 685
||||||||||| | ||||||||| ||||||||| ||||| | ||||||| || |||||
Sbjct: 674 atgttgacgccagggtacttgcatggcaccctcttgtactgcatcctgatgacaccgccg 615
Query: 686 gcgcggagcttgtcggccatgccgggccgggccatggcgcccatggcggtgccgctcatg 745
||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||
Sbjct: 614 gcgcggagcttgtcggccatgccaggcttcgccatggcgcccagggcggtgccgctcatg 555
Query: 746 tc 747
||
Sbjct: 554 tc 553
>gb|CA627265.1|CA627265 wl1n.pk154.a8 wl1n Triticum aestivum cDNA clone wl1n.pk154.a8 5' end,
mRNA sequence
Length = 529
Score = 129 bits (65), Expect = 5e-028
Identities = 164/197 (83%)
Strand = Plus / Minus
Query: 812 ggctggccggagcacgcggcgttggtcgtgcatttcacctcgtagcaggcgccgcagccc 871
|||||||||||||| || | |||| | |||||| ||||||||||||||||||||||||
Sbjct: 282 ggctggccggagcatgccgggttgctgtcgcatttaacctcgtagcaggcgccgcagccc 223
Query: 872 tcgcctcccctgtacagtggcgtgctcccggcggcgatcatcgagtcgaatggcttcttt 931
| ||||||| || |||| | || ||||||||| ||||||||||| ||| || ||
Sbjct: 222 ttgcctcccttgaacagggacgggctcccggccgcgatcatcgacgagaaggggcgctgc 163
Query: 932 ccgacggccgtctggtagccgcacgcgccgccgtcgctcccgtcgccgttggtcgcgccg 991
|||||||| |||||||| |||||||| |||||||| || ||||||||||| | ||||||
Sbjct: 162 ccgacggcggtctggtacccgcacgcaccgccgtcactgccgtcgccgtttggggcgccg 103
Query: 992 tagtacgtggcgccggc 1008
|||||||| ||||||||
Sbjct: 102 tagtacgtcgcgccggc 86
>gb|BE414976.1|BE414976 MWL009.F03F990624 ITEC MWL Wheat Root Library Triticum aestivum
cDNA clone MWL009.F03, mRNA sequence
Length = 308
Score = 125 bits (63), Expect = 9e-027
Identities = 201/247 (81%), Gaps = 1/247 (0%)
Strand = Plus / Minus
Query: 331 tcaggggtagttgaccaaggagcggtaggtcttgccgggcttccacgcggccgggatggc 390
|||||||||||| |||| ||||||||| || |||| |||||| ||| || || |
Sbjct: 249 tcaggggtagttcaccagggagcggtacgtggccccggccttccagttggcgggaatnnc 190
Query: 391 gttgttggcgacgagcaccctgc-gggagtcggaggtgagccggagcccgaacggcgctt 449
||||||| |||||||| ||||| |||||||| |||||||||||||| || || ||
Sbjct: 189 gttgttgacgacgagcttcctgccgggagtcgaaggtgagccggagcganaagggggcgc 130
Query: 450 tgagcttcctgccgttgttgaggcgccacgtggcgccccagttgtgcgccataggagtcc 509
||| |||||| ||||||||||||||| |||||||||| || ||||| || ||||
Sbjct: 129 gcagccgcctgccattgttgaggcgccacagagcgccccagtcctgagccatgggcgtcc 70
Query: 510 agacgccgctgccggcctccatgaggtccacggcgctgaggtcgccgtcgtcgtcctcga 569
|| ||||||||||||||||| ||||| ||||||| |||||||||||||||||||||| |
Sbjct: 69 aggcgccgctgccggcctccttgagggccacggccttgaggtcgccgtcgtcgtcctcna 10
Query: 570 actcgat 576
|||||||
Sbjct: 9 actcgat 3
>gb|CA616659.1|CA616659 wl1n.pk0005.f3 wl1n Triticum aestivum cDNA clone wl1n.pk0005.f3 5'
end, mRNA sequence
Length = 565
Score = 115 bits (58), Expect = 8e-024
Identities = 140/168 (83%)
Strand = Plus / Minus
Query: 841 gcatttcacctcgtagcaggcgccgcagccctcgcctcccctgtacagtggcgtgctccc 900
|||||| ||||||||||||||||||||||||| ||||||| || |||| | || ||||||
Sbjct: 253 gcatttaacctcgtagcaggcgccgcagcccttgcctcccttgaacagggacgggctccc 194
Query: 901 ggcggcgatcatcgagtcgaatggcttctttccgacggccgtctggtagccgcacgcgcc 960
||| ||||||||||| ||| || | |||||||| |||||||| |||||||| ||
Sbjct: 193 ggccgcgatcatcgacgagaaggggcgntgcccgacggcggtctggtacccgcacgcacc 134
Query: 961 gccgtcgctcccgtcgccgttggtcgcgccgtagtacgtggcgccggc 1008
|||||| || || |||||||| | |||||||||||||| ||||||||
Sbjct: 133 gccgtcactgccntcgccgtttggggcgccgtagtacgtcgcgccggc 86
>gb|CV760781.1|CV760781 FGAS055167 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 837
Score = 111 bits (56), Expect = 1e-022
Identities = 293/370 (79%), Gaps = 3/370 (0%)
Strand = Plus / Minus
Query: 640 gtacttgcacggcaccctcctgtacaggatcctgagcacgccgccagcgcggagcttgtc 699
||||||||| ||| ||||| ||||| ||||| ||| | ||||| || ||||| ||||
Sbjct: 696 gtacttgcatggccccctcttgtactggatcttgatgatcccgccggcccggagtttgtt 637
Query: 700 ggccatgccgggccgggccatggcgcccatggcggtgccgctcatgtcaaagtgctcgac 759
||||||||| ||| |||||||||||||||| ||||||||||||||| ||||| || |
Sbjct: 636 ggccatgccaggcttcgccatggcgcccatggaggtgccgctcatgtcgaagtgggcggc 577
Query: 760 ctcgccg-gggaacag--cccgccaggggactggtcggtgattacgatggtcacgggctg 816
||| ||| || || | |||| | ||| ||| ||||||||| |||| |||| | |||||
Sbjct: 576 ctcaccgaggcaagcggccccggcggggcactcgtcggtgatgacgacggtcgccggctg 517
Query: 817 gccggagcacgcggcgttggtcgtgcatttcacctcgtagcaggcgccgcagccctcgcc 876
||||||||| || |||| |||||||| |||| |||||| || |||||||||| |||
Sbjct: 516 gccggagcatgcctggttgcctgtgcatttaacctngtagcacgctccgcagcccttgcc 457
Query: 877 tcccctgtacagtggcgtgctcccggcggcgatcatcgagtcgaatggcttctttccgac 936
| ||||| || | || | | ||||||||||||||||| ||| ||| || | |||
Sbjct: 456 atctctgtagagcgacgggttgccggcggcgatcatcgacgagaacggccggttgctgac 397
Query: 937 ggccgtctggtagccgcacgcgccgccgtcgctcccgtcgccgttggtcgcgccgtagta 996
|| |||||||||| |||||||| |||||||| ||||||||||||| |||||||| ||
Sbjct: 396 agcgctctggtagccacacgcgccaccgtcgcttccgtcgccgttgggggcgccgtaata 337
Query: 997 cgtggcgccg 1006
||| ||||||
Sbjct: 336 cgtcgcgccg 327
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1174 gagctttcgggtgcaagcaatggggctcactaggagtgagaggaccacca 1223
|||||| |||| ||||||||||||||||| || ||||||||||| ||||
Sbjct: 237 gagcttgcgggaacaagcaatggggctcacaagaagtgagaggacaacca 188
>gb|AL825997.1|AL825997 AL825997 p:234 Triticum aestivum cDNA clone F02_p234_plate_19, mRNA
sequence
Length = 558
Score = 101 bits (51), Expect = 1e-019
Identities = 235/294 (79%), Gaps = 3/294 (1%)
Strand = Plus / Minus
Query: 716 gccatggcgcccatggcggtgccgctcatgtcaaagtgctcgacctcgccggggaa--ca 773
|||||||||||||||| ||||||||||||||| ||||| || |||| ||| || | |
Sbjct: 545 gccatggcgcccatggaggtgccgctcatgtcgaagtgggcggcctcaccgaggcaagcg 486
Query: 774 gcccgccagggg-actggtcggtgattacgatggtcacgggctggccggagcacgcggcg 832
||||| |||| ||| ||||||||| |||| |||| | |||||||||||||| || |
Sbjct: 485 gcccgggcggggcactcgtcggtgatgacgacggtcgccggctggccggagcatgcctgg 426
Query: 833 ttggtcgtgcatttcacctcgtagcaggcgccgcagccctcgcctcccctgtacagtggc 892
||| |||||||| ||||||||||| || |||||||||| ||| | ||||| || | |
Sbjct: 425 ttgcctgtgcatttaacctcgtagcacgctccgcagcccttgccatctctgtagagcgac 366
Query: 893 gtgctcccggcggcgatcatcgagtcgaatggcttctttccgacggccgtctggtagccg 952
| | | ||||||||||| ||||| ||| ||| || ||||| || ||||||||||
Sbjct: 365 gggttgccggcggcgattatcgacgagaacggccggttgccgacagcgctctggtagcca 306
Query: 953 cacgcgccgccgtcgctcccgtcgccgttggtcgcgccgtagtacgtggcgccg 1006
|||||||| |||||||| ||||||||||||| |||||||| ||||| ||||||
Sbjct: 305 cacgcgccaccgtcgcttccgtcgccgttgggggcgccgtaatacgtcgcgccg 252
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1174 gagctttcgggtgcaagcaatggggctcactaggagtgagaggaccacca 1223
|||||| |||| ||||||||||||||||| || ||||||||||| ||||
Sbjct: 162 gagcttgcgggaacaagcaatggggctcacaagaagtgagaggacaacca 113
>gb|CK201442.1|CK201442 FGAS009962 Triticum aestivum FGAS: Library 3 Gate 6 Triticum aestivum
cDNA, mRNA sequence
Length = 836
Score = 95.6 bits (48), Expect = 8e-018
Identities = 129/156 (82%)
Strand = Plus / Minus
Query: 854 tagcaggcgccgcagccctcgcctcccctgtacagtggcgtgctcccggcggcgatcatc 913
||||| ||||||||||||| ||| || || |||| || | |||||||||||||||||||
Sbjct: 551 tagcacgcgccgcagcccttgcccgccatgaacagaggggagctcccggcggcgatcatc 492
Query: 914 gagtcgaatggcttctttccgacggccgtctggtagccgcacgcgccgccgtcgctcccg 973
|| ||| ||| | || || || ||||||||||||||||| |||||||||||||||
Sbjct: 491 gacgagaacggccggtgccctacagcggtctggtagccgcacgctccgccgtcgctcccg 432
Query: 974 tcgccgttggtcgcgccgtagtacgtggcgccggcg 1009
|||||||||| |||||| |||||||||||||||
Sbjct: 431 tcgccgttggggttgccgtaatacgtggcgccggcg 396
Score = 46.1 bits (23), Expect = 0.006
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 1174 gagctttcgggtgcaagcaatggggctcactaggagtgagaggacca 1220
|||||| |||| |||||||||||||||||| || || ||||| ||||
Sbjct: 291 gagcttgcgggagcaagcaatggggctcacaagaagcgagagcacca 245
>gb|CV769733.1|CV769733 FGAS064125 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 891
Score = 89.7 bits (45), Expect = 5e-016
Identities = 174/217 (80%)
Strand = Plus / Minus
Query: 790 gtcggtgattacgatggtcacgggctggccggagcacgcggcgttggtcgtgcatttcac 849
||||| ||| |||| |||| | |||||||||||||| || |||| |||||||| ||
Sbjct: 564 gtcggggatgacgacggtcgccggctggccggagcatgcctggttgcctgtgcatttaac 505
Query: 850 ctcgtagcaggcgccgcagccctcgcctcccctgtacagtggcgtgctcccggcggcgat 909
||||||||| || |||||||||| ||| | ||||| || | || | | |||||||||||
Sbjct: 504 ctcgtagcacgctccgcagcccttgccatctctgtagagcgacgggttgccggcggcgat 445
Query: 910 catcgagtcgaatggcttctttccgacggccgtctggtagccgcacgcgccgccgtcgct 969
|||||| ||| ||| || ||||| || |||||||||| |||||||| ||||||||
Sbjct: 444 catcgacgagaacggccggttgccgacagcgctctggtagccacacgcgccaccgtcgct 385
Query: 970 cccgtcgccgttggtcgcgccgtagtacgtggcgccg 1006
||||||||||||| |||||||| ||||| ||||||
Sbjct: 384 tccgtcgccgttgggggcgccgtaatacgtcgcgccg 348
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1174 gagctttcgggtgcaagcaatggggctcactaggagtgagaggaccacca 1223
|||||| |||| ||||||||||||||||| || ||||||||||| ||||
Sbjct: 258 gagcttgcgggaacaagcaatggggctcacaagaagtgagaggacaacca 209
>gb|BJ280799.1|BJ280799 BJ280799 Y. Ogihara unpublished cDNA library, Wh_r Triticum aestivum
cDNA clone whr19b22 5', mRNA sequence
Length = 524
Score = 87.7 bits (44), Expect = 2e-015
Identities = 137/168 (81%)
Strand = Plus / Minus
Query: 839 gtgcatttcacctcgtagcaggcgccgcagccctcgcctcccctgtacagtggcgtgctc 898
|||||||| ||||||||||| || |||||||||| ||| | ||||| || | || | ||
Sbjct: 350 gtgcatttgacctcgtagcacgctccgcagcccttgccatctctgtagagcgacgggttc 291
Query: 899 ccggcggcgatcatcgagtcgaatggcttctttccgacggccgtctggtagccgcacgcg 958
||||||||||||||||| ||| ||| || || || || |||||||||| ||||||
Sbjct: 290 ccggcggcgatcatcgacgagaacggccggttccccacagcgctctggtagccacacgcg 231
Query: 959 ccgccgtcgctcccgtcgccgttggtcgcgccgtagtacgtggcgccg 1006
|| |||||||| ||||||||||||| |||||||| ||||| ||||||
Sbjct: 230 ccaccgtcgcttccgtcgccgttgggggcgccgtaatacgtcgcgccg 183
Score = 75.8 bits (38), Expect = 7e-012
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 680 ccgccagcgcggagcttgtcggccatgccgggccgggccatggcgcccatggcggtgccg 739
||||| || ||||| |||||||||||||| ||| |||||||||||||||| |||||||
Sbjct: 513 ccgccggcccggagtttgtcggccatgccaggcttcgccatggcgcccatggaggtgccg 454
Query: 740 ctcatgtcaaagtg 753
|||||||| |||||
Sbjct: 453 ctcatgtcgaagtg 440
>gb|BJ287436.1|BJ287436 BJ287436 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr20b22 3', mRNA sequence
Length = 557
Score = 87.7 bits (44), Expect = 2e-015
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 333 aggggtagttgaccaaggagcggtaggtcttgccgggcttccacgcggccgggatggcgt 392
|||||||||| ||||||||||||||||| |||| |||||| ||| |||||| |||
Sbjct: 376 aggggtagttaaccaaggagcggtaggtggctccggccttccagctggcggggatgacgt 435
Query: 393 tgttggcgacgagcaccctgcgggagtcggaggtgagccggagc 436
||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct: 436 tgttgacgacgagcttcctgccggagtcggaggtgagccggagc 479
>gb|BQ838005.1|BQ838005 WHE2905_E01_I01ZS Wheat aluminum-stressed root tip cDNA library
Triticum aestivum cDNA clone WHE2905_E01_I01, mRNA
sequence
Length = 621
Score = 87.7 bits (44), Expect = 2e-015
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 333 aggggtagttgaccaaggagcggtaggtcttgccgggcttccacgcggccgggatggcgt 392
|||||||||| ||||||||||||||||| |||| |||||| ||| |||||| |||
Sbjct: 441 aggggtagttaaccaaggagcggtaggtggctccggccttccagctggcggggatgacgt 500
Query: 393 tgttggcgacgagcaccctgcgggagtcggaggtgagccggagc 436
||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct: 501 tgttgacgacgagcttcctgccggagtcggaggtgagccggagc 544
>gb|CD452508.1|CD452508 WHE1108_A05_B10ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1108_A05_B10,
mRNA sequence
Length = 494
Score = 87.7 bits (44), Expect = 2e-015
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 333 aggggtagttgaccaaggagcggtaggtcttgccgggcttccacgcggccgggatggcgt 392
|||||||||| ||||||||||||||||| |||| |||||| ||| |||||| |||
Sbjct: 390 aggggtagttaaccaaggagcggtaggtggctccggccttccagctggcggggatgacgt 449
Query: 393 tgttggcgacgagcaccctgcgggagtcggaggtgagccggagc 436
||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct: 450 tgttgacgacgagcttcctgccggagtcggaggtgagccggagc 493
>gb|CK215734.1|CK215734 FGAS027704 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 727
Score = 87.7 bits (44), Expect = 2e-015
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 333 aggggtagttgaccaaggagcggtaggtcttgccgggcttccacgcggccgggatggcgt 392
|||||||||| ||||||||||||||||| |||| |||||| ||| |||||| |||
Sbjct: 453 aggggtagttaaccaaggagcggtaggtggctccggccttccagctggcggggatgacgt 512
Query: 393 tgttggcgacgagcaccctgcgggagtcggaggtgagccggagc 436
||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct: 513 tgttgacgacgagcttcctgccggagtcggaggtgagccggagc 556
Score = 54.0 bits (27), Expect = 3e-005
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 526 ctccatgaggtccacggcgctgaggtcgccgtcgtcgtcctcg-aactcgatgagcacgt 584
||||||||||||||||||| | ||| ||||||| ||||||| ||||||||||| || |
Sbjct: 653 ctccatgaggtccacggcgtttagggtcccgtcgttgtcctcgaaactcgatgaggacct 712
Query: 585 cgaagtagtacgggt 599
| | |||||||||||
Sbjct: 713 ccaggtagtacgggt 727
>gb|BE442908.1|BE442908 WHE1108_A05_B10ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1108_A05_B10,
mRNA sequence
Length = 475
Score = 83.8 bits (42), Expect = 3e-014
Identities = 87/102 (85%)
Strand = Plus / Minus
Query: 333 aggggtagttgaccaaggagcggtaggtcttgccgggcttccacgcggccgggatggcgt 392
|||||||||| ||||||||||||||||| |||| |||||| ||| |||||| |||
Sbjct: 102 aggggtagttaaccaaggagcggtaggtggctccggccttccagctggcggggatgacgt 43
Query: 393 tgttggcgacgagcaccctgcgggagtcggaggtgagccgga 434
||||| |||||||| ||||| ||||||||||||||||||||
Sbjct: 42 tgttgacgacgagcttcctgccggagtcggaggtgagccgga 1
>gb|CV767446.1|CV767446 FGAS061836 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 813
Score = 73.8 bits (37), Expect = 3e-011
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 942 tctggtagccgcacgcgccgccgtcgctcccgtcgccgttggtcgcgccgtagtacgtgg 1001
|||||||||| |||||||| |||||||| ||||||||||||| |||||||| ||||| |
Sbjct: 400 tctggtagccacacgcgccaccgtcgcttccgtcgccgttgggggcgccgtaatacgtcg 341
Query: 1002 cgccg 1006
|||||
Sbjct: 340 cgccg 336
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1174 gagctttcgggtgcaagcaatggggctcactaggagtgagaggaccacca 1223
|||||| |||| ||||||||||||||||| || ||||||||||| ||||
Sbjct: 246 gagcttgcgggaacaagcaatggggctcacaagaagtgagaggacaacca 197
>gb|CV776014.1|CV776014 FGAS070418 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum
cDNA, mRNA sequence
Length = 852
Score = 65.9 bits (33), Expect = 7e-009
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 942 tctggtagccgcacgcgccgccgtcgctcccgtcgccgttggtcgcgccgtagtacgtgg 1001
|||||||||| |||||||| |||||||| | ||||||||||| |||||||| ||||| |
Sbjct: 400 tctggtagccacacgcgccaccgtcgcttcggtcgccgttgggggcgccgtaatacgtcg 341
Query: 1002 cgccg 1006
|||||
Sbjct: 340 cgccg 336
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1174 gagctttcgggtgcaagcaatggggctcactaggagtgagaggaccacca 1223
|||||| |||| ||||||||||||||||| || ||||||||||| ||||
Sbjct: 246 gagcttgcgggaacaagcaatggggctcacaagaagtgagaggacaacca 197
>gb|CA606615.1|CA606615 wr1.pk0070.b10 wr1 Triticum aestivum cDNA clone wr1.pk0070.b10 5'
end, mRNA sequence
Length = 362
Score = 63.9 bits (32), Expect = 3e-008
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 383 gggatggcgttgttggcgacgagcaccctgcgggagtcggaggtgagc 430
|||||| |||||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 81 gggatgacgttgttgacgacgaggaccctgccggagtcggaggtgagc 34
>gb|BJ236789.1|BJ236789 BJ236789 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe23c04 5', mRNA sequence
Length = 659
Score = 54.0 bits (27), Expect = 3e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 548 aggtcgccgtcgtcgtcctcgaactcgatgagcacgtcgaagtagta 594
|||||||||||| |||||||| |||||||||||| | ||| ||||||
Sbjct: 378 aggtcgccgtcgccgtcctcgtactcgatgagcatggcgaggtagta 332
>gb|BJ242327.1|BJ242327 BJ242327 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe23c04 3', mRNA sequence
Length = 669
Score = 54.0 bits (27), Expect = 3e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 548 aggtcgccgtcgtcgtcctcgaactcgatgagcacgtcgaagtagta 594
|||||||||||| |||||||| |||||||||||| | ||| ||||||
Sbjct: 541 aggtcgccgtcgccgtcctcgtactcgatgagcatggcgaggtagta 587
>gb|BJ299385.1|BJ299385 BJ299385 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl30b20 3', mRNA sequence
Length = 643
Score = 54.0 bits (27), Expect = 3e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 548 aggtcgccgtcgtcgtcctcgaactcgatgagcacgtcgaagtagta 594
|||||||||||| |||||||| |||||||||||| | ||| ||||||
Sbjct: 390 aggtcgccgtcgccgtcctcgtactcgatgagcatggcgaggtagta 436
>gb|BJ299585.1|BJ299585 BJ299585 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl31b20 3', mRNA sequence
Length = 480
Score = 54.0 bits (27), Expect = 3e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 548 aggtcgccgtcgtcgtcctcgaactcgatgagcacgtcgaagtagta 594
|||||||||||| |||||||| |||||||||||| | ||| ||||||
Sbjct: 388 aggtcgccgtcgccgtcctcgtactcgatgagcatggcgaggtagta 434
>gb|BQ806609.1|BQ806609 WHE3581_A09_B17ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3581_A09_B17, mRNA sequence
Length = 733
Score = 54.0 bits (27), Expect = 3e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 548 aggtcgccgtcgtcgtcctcgaactcgatgagcacgtcgaagtagta 594
|||||||||||| |||||||| |||||||||||| | ||| ||||||
Sbjct: 283 aggtcgccgtcgccgtcctcgtactcgatgagcatggcgaggtagta 237
>gb|CA706238.1|CA706238 wdk1c.pk023.d11 wdk1c Triticum aestivum cDNA clone wdk1c.pk023.d11 5'
end, mRNA sequence
Length = 418
Score = 54.0 bits (27), Expect = 3e-005
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 944 tggtagccgcacgcgccgccgtcgc-tcccgtcgccgttggtcgcgccgtagtacgtggc 1002
|||||||| ||||| |||||||||| |||| |||||||||| |||||| ||||||||
Sbjct: 347 tggtagccacacgctccgccgtcgcttcccttcgccgttggggttgccgtaatacgtggc 288
Query: 1003 gccggcg 1009
|||||||
Sbjct: 287 gccggcg 281
Score = 44.1 bits (22), Expect = 0.025
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1174 gagctttcgggtgcaagcaatggggctcac 1203
|||||| |||| ||||||||||||||||||
Sbjct: 176 gagcttgcgggagcaagcaatggggctcac 147
>gb|CD893554.1|CD893554 G118.123P05R011115 G118 Triticum aestivum cDNA clone G118123P05,
mRNA sequence
Length = 725
Score = 54.0 bits (27), Expect = 3e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 548 aggtcgccgtcgtcgtcctcgaactcgatgagcacgtcgaagtagta 594
|||||||||||| |||||||| |||||||||||| | ||| ||||||
Sbjct: 655 aggtcgccgtcgccgtcctcgtactcgatgagcatggcgaggtagta 609
Score = 44.1 bits (22), Expect = 0.025
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 839 gtgcatttcacctcgtagcaggcgccgcagccct 872
||||||||||||| |||||| | |||||||||||
Sbjct: 361 gtgcatttcacctggtagcaagagccgcagccct 328
>gb|CD893799.1|CD893799 G118.124J02F010828 G118 Triticum aestivum cDNA clone G118124J02,
mRNA sequence
Length = 792
Score = 54.0 bits (27), Expect = 3e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 548 aggtcgccgtcgtcgtcctcgaactcgatgagcacgtcgaagtagta 594
|||||||||||| |||||||| |||||||||||| | ||| ||||||
Sbjct: 653 aggtcgccgtcgccgtcctcgtactcgatgagcatggcgaggtagta 607
>gb|CD897610.1|CD897610 G174.106I03R011120 G174 Triticum aestivum cDNA clone G174106I03,
mRNA sequence
Length = 757
Score = 54.0 bits (27), Expect = 3e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 548 aggtcgccgtcgtcgtcctcgaactcgatgagcacgtcgaagtagta 594
|||||||||||| |||||||| |||||||||||| | ||| ||||||
Sbjct: 564 aggtcgccgtcgccgtcctcgtactcgatgagcatggcgaggtagta 610
>gb|CD900159.1|CD900159 G174.114K12R011120 G174 Triticum aestivum cDNA clone G174114K12,
mRNA sequence
Length = 615
Score = 54.0 bits (27), Expect = 3e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 548 aggtcgccgtcgtcgtcctcgaactcgatgagcacgtcgaagtagta 594
|||||||||||| |||||||| |||||||||||| | ||| ||||||
Sbjct: 410 aggtcgccgtcgccgtcctcgtactcgatgagcatggcgaggtagta 456
>gb|CD903894.1|CD903894 G356.111M15R011024 G356 Triticum aestivum cDNA clone G356111M15,
mRNA sequence
Length = 694
Score = 54.0 bits (27), Expect = 3e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 548 aggtcgccgtcgtcgtcctcgaactcgatgagcacgtcgaagtagta 594
|||||||||||| |||||||| |||||||||||| | ||| ||||||
Sbjct: 505 aggtcgccgtcgccgtcctcgtactcgatgagcatggcgaggtagta 551
>gb|CD905001.1|CD905001 G468.100D20F010614 G468 Triticum aestivum cDNA clone G468100D20,
mRNA sequence
Length = 671
Score = 54.0 bits (27), Expect = 3e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 548 aggtcgccgtcgtcgtcctcgaactcgatgagcacgtcgaagtagta 594
|||||||||||| |||||||| |||||||||||| | ||| ||||||
Sbjct: 526 aggtcgccgtcgccgtcctcgtactcgatgagcatggcgaggtagta 480
Score = 44.1 bits (22), Expect = 0.025
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 839 gtgcatttcacctcgtagcaggcgccgcagccct 872
||||||||||||| |||||| | |||||||||||
Sbjct: 232 gtgcatttcacctggtagcaagagccgcagccct 199
>gb|CA599015.1|CA599015 wyr1c.pk004.d17 wyr1c Triticum aestivum cDNA clone wyr1c.pk004.d17 5'
end, mRNA sequence
Length = 394
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 1174 gagctttcgggtgcaagcaatggggctcactaggagtgagaggaccacca 1223
|||||| |||| ||||||||||||||||| || ||||||||||| ||||
Sbjct: 143 gagcttgcgggaacaagcaatggggctcacaagaagtgagaggacaacca 94
>gb|BQ167140.1|BQ167140 WHE0058_A04_B08ZK Cheyenne wheat endosperm cDNA library Triticum
aestivum cDNA clone WHE0058_A04_B08, mRNA sequence
Length = 625
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 548 aggtcgccgtcgtcgtcctcgaactcgatgagca 581
|||||||||||| |||||||| ||||||||||||
Sbjct: 506 aggtcgccgtcgccgtcctcgtactcgatgagca 539
>gb|CD893800.1|CD893800 G118.124J02R011116 G118 Triticum aestivum cDNA clone G118124J02,
mRNA sequence
Length = 651
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 548 aggtcgccgtcgtcgtcctcgaactcgatgagca 581
|||||||||||| |||||||| ||||||||||||
Sbjct: 513 aggtcgccgtcgccgtcctcgtactcgatgagca 546
>gb|BE405600.1|BE405600 WHE1209_C03_E05ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1209_C03_E05, mRNA
sequence
Length = 614
Score = 50.1 bits (25), Expect = 4e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 715 ggccatggcgcccatggcggtgccgctcatgtc 747
|||||||||||| | ||||||||||||||||||
Sbjct: 279 ggccatggcgccgaaggcggtgccgctcatgtc 247
Score = 46.1 bits (23), Expect = 0.006
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 899 ccggcggcgatcatcgagtcgaatggcttctttccgacggccgtctggtagccgcacgcg 958
||||||||||||||||| |||||| | || |||||||| | ||||| |||||||||
Sbjct: 98 ccggcggcgatcatcgacgagaatgggtgctggccgacggcgctttggtaaccgcacgcg 39
Query: 959 ccgccgtcgct 969
|| ||||||||
Sbjct: 38 ccaccgtcgct 28
>gb|CA728049.1|CA728049 wdi1c.pk002.m13 wdi1c Triticum aestivum cDNA clone wdi1c.pk002.m13
5' end, mRNA sequence
Length = 626
Score = 50.1 bits (25), Expect = 4e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 848 acctcgtagcaggcgccgcagccctcgcc 876
|||| ||||||||||||||||||||||||
Sbjct: 459 accttgtagcaggcgccgcagccctcgcc 431
Score = 42.1 bits (21), Expect = 0.099
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 950 ccgcacgcgccgccgtcgctcccgtcgcc 978
|||||||||||||| ||||| ||||||||
Sbjct: 357 ccgcacgcgccgccatcgctgccgtcgcc 329
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 377,812
Number of Sequences: 636343
Number of extensions: 377812
Number of successful extensions: 114218
Number of sequences better than 0.5: 169
Number of HSP's better than 0.5 without gapping: 166
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 113695
Number of HSP's gapped (non-prelim): 481
length of query: 1356
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1336
effective length of database: 354,513,379
effective search space: 473629874344
effective search space used: 473629874344
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)