BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131612.2.1
(620 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD902052.1|CD902052 G356.105M05F010918 G356 Triticum aes... 311 3e-083
gb|BE416009.1|BE416009 MUG003.D02R990623 ITEC MUG Wheat Spi... 297 5e-079
gb|DQ086484.1| Triticum aestivum putative 1,3-beta-glucan s... 289 1e-076
gb|BJ265301.1|BJ265301 BJ265301 Y. Ogihara unpublished cDNA... 281 3e-074
gb|BJ267676.1|BJ267676 BJ267676 Y. Ogihara unpublished cDNA... 281 3e-074
gb|BJ272623.1|BJ272623 BJ272623 Y. Ogihara unpublished cDNA... 281 3e-074
gb|BJ259588.1|BJ259588 BJ259588 Y. Ogihara unpublished cDNA... 274 7e-072
gb|CD934561.1|CD934561 OV.001G12R001002 OV Triticum aestivu... 274 7e-072
gb|BQ236623.1|BQ236623 TaE05029A09F TaE05 Triticum aestivum... 252 2e-065
gb|CA617488.1|CA617488 wl1n.pk0020.b11 wl1n Triticum aestiv... 250 1e-064
gb|CD927326.1|CD927326 GR45.101M21R010607 GR45 Triticum aes... 244 6e-063
gb|CA613808.1|CA613808 wr1.pk0157.a9 wr1 Triticum aestivum ... 182 2e-044
gb|BQ170786.1|BQ170786 WHE2305_E08_I15ZT Wheat pre-anthesis... 172 2e-041
gb|CD927659.1|CD927659 GR45.102M21F010315 GR45 Triticum aes... 147 1e-033
gb|CK154392.1|CK154392 FGAS033093 Triticum aestivum FGAS: T... 139 3e-031
gb|DR432259.1|DR432259 441E-AH2 Line 441 epidermal library ... 129 2e-028
gb|CA612893.1|CA612893 wr1.pk0160.a2 wr1 Triticum aestivum ... 125 4e-027
gb|BQ905728.1|BQ905728 Ta04_17p23_R Ta04_AAFC_ECORC_Fusariu... 123 2e-026
gb|BJ208630.1|BJ208630 BJ208630 Y. Ogihara unpublished cDNA... 115 4e-024
gb|CA612946.1|CA612946 wr1.pk0149.f7 wr1 Triticum aestivum ... 98 9e-019
gb|BF199676.1|BF199676 WHE0591-0594_I13_I13ZE Triticum mono... 94 1e-017
gb|BG607810.1|BG607810 WHE2487_G04_M07ZS Triticum monococcu... 94 1e-017
gb|CK153351.1|CK153351 FGAS031946 Triticum aestivum FGAS: T... 90 2e-016
gb|CV768769.1|CV768769 FGAS063160 Triticum aestivum FGAS: L... 90 2e-016
gb|CK154616.1|CK154616 FGAS033318 Triticum aestivum FGAS: T... 88 8e-016
gb|CK207448.1|CK207448 FGAS019071 Triticum aestivum FGAS: L... 82 5e-014
gb|CD490322.1|CD490322 WHE2494_D06_H12ZT Triticum monococcu... 76 3e-012
gb|BE492039.1|BE492039 WHE0552_B02_B02ZE Triticum monococcu... 66 3e-009
gb|CK154494.1|CK154494 FGAS033196 Triticum aestivum FGAS: T... 64 1e-008
gb|BJ211685.1|BJ211685 BJ211685 Y. Ogihara unpublished cDNA... 62 5e-008
gb|BE428096.1|BE428096 MTD003.C04F990615 ITEC MTD Durum Whe... 58 8e-007
gb|BJ274419.1|BJ274419 BJ274419 Y. Ogihara unpublished cDNA... 58 8e-007
gb|AL820316.1|AL820316 AL820316 N:130 Triticum aestivum cDN... 58 8e-007
gb|CA499643.1|CA499643 WHE4009_G12_M23ZT Wheat meiotic anth... 58 8e-007
gb|CA660459.1|CA660459 wlm1.pk0019.f4 wlm1 Triticum aestivu... 58 8e-007
gb|CA667704.1|CA667704 wlsu1.pk017.p1 wlsu1 Triticum aestiv... 58 8e-007
gb|CD454191.1|CD454191 WHE0991-0994_B23_B23ZT CS wheat pre-... 58 8e-007
gb|CD938994.1|CD938994 OV.111N14F010309 OV Triticum aestivu... 58 8e-007
gb|DQ086487.1| Triticum aestivum putative 1,3-beta-glucan s... 58 8e-007
gb|BQ904431.1|BQ904431 Ta04_03h09_R Ta04_AAFC_ECORC_Fusariu... 56 3e-006
gb|BJ273587.1|BJ273587 BJ273587 Y. Ogihara unpublished cDNA... 54 1e-005
gb|CL902396.1|CL902396 CSHC1771 1639HC library Triticum aes... 52 5e-005
gb|CD452820.1|CD452820 WHE1132_C10_F20ZT CS wheat etiolated... 52 5e-005
gb|BG607488.1|BG607488 WHE2494_D06_H12ZS Triticum monococcu... 50 2e-004
gb|CA668899.1|CA668899 wlsu1.pk023.i2 wlsu1 Triticum aestiv... 50 2e-004
gb|BJ273393.1|BJ273393 BJ273393 Y. Ogihara unpublished cDNA... 46 0.003
gb|CA650294.1|CA650294 wre1n.pk0150.g10 wre1n Triticum aest... 46 0.003
gb|CA667480.1|CA667480 wlsu1.pk015.b6 wlsu1 Triticum aestiv... 46 0.003
gb|CA669387.1|CA669387 wlsu1.pk022.h13 wlsu1 Triticum aesti... 46 0.003
gb|CA670118.1|CA670118 wlsu1.pk025.m7 wlsu1 Triticum aestiv... 46 0.003
gb|CD918312.1|CD918312 G608.108N24F010907 G608 Triticum aes... 46 0.003
gb|CA744760.1|CA744760 wri1s.pk009.m24 wri1s Triticum aesti... 44 0.011
gb|CD883695.1|CD883695 F1.114C10F010531 F1 Triticum aestivu... 40 0.18
gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR... 40 0.18
>gb|CD902052.1|CD902052 G356.105M05F010918 G356 Triticum aestivum cDNA clone G356105M05,
mRNA sequence
Length = 525
Score = 311 bits (157), Expect = 3e-083
Identities = 268/305 (87%)
Strand = Plus / Plus
Query: 1 acatctttgtttgcatccttgccttcatgcccactggatggggtttgctcctgattgccc 60
||||||| || |||||||| ||||||||||| ||||||||||| |||| ||||||||||
Sbjct: 220 acatcttcgtctgcatcctcgccttcatgccgactggatggggcctgcttctgattgccc 279
Query: 61 aagctatcaggcctgtgattcaaaagatcgggctgtgggggtcgatcaaggctcttgccc 120
|||| |||| |||||| || | | | ||||||||||||||||| | ||||| || ||||
Sbjct: 280 aagcgatcaagcctgtcgttgagatggtcgggctgtgggggtcggtgaaggccctcgccc 339
Query: 121 ggggctacgagatcctaatggggcttctcctgttcacgcccattgctttccttgcctggt 180
|||||||||||||||| |||||||| || |||||||||||||| || ||||| || ||||
Sbjct: 340 ggggctacgagatcctgatggggctcctgctgttcacgcccatcgcgttcctcgcgtggt 399
Query: 181 tcccgttcgtgtccgagttccagaccaggatgctgttcaaccaggccttcagcagaggtc 240
|||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |
Sbjct: 400 tcccgttcgtgtccgagttccagaccaggatgctcttcaaccaggcgttcagcagaggcc 459
Query: 241 tgcagatctcccgtatcctgggaggacacaagaaagaccgagggacgcggagcaaggagt 300
||||||||||||||||||| || || |||||||| ||||||| || |||| ||||||||
Sbjct: 460 tgcagatctcccgtatcctcggcgggcacaagaaggaccgagccacccggaacaaggagt 519
Query: 301 agtag 305
|||||
Sbjct: 520 agtag 524
>gb|BE416009.1|BE416009 MUG003.D02R990623 ITEC MUG Wheat Spikelet Library Triticum aestivum
cDNA clone MUG003.D02, mRNA sequence
Length = 600
Score = 297 bits (150), Expect = 5e-079
Identities = 264/302 (87%)
Strand = Plus / Plus
Query: 1 acatctttgtttgcatccttgccttcatgcccactggatggggtttgctcctgattgccc 60
||||||| || |||||||| ||||||||||| ||||||||||| |||| ||||||||||
Sbjct: 27 acatcttcgtctgcatcctcgccttcatgccgactggatggggcctgcttctgattgccc 86
Query: 61 aagctatcaggcctgtgattcaaaagatcgggctgtgggggtcgatcaaggctcttgccc 120
|||| |||| |||||| | | | | ||||||||||||||||| | |||||||| ||||
Sbjct: 87 aagcgatcaagcctgtcgtcgagatggtcgggctgtgggggtcggtgaaggctctcgccc 146
Query: 121 ggggctacgagatcctaatggggcttctcctgttcacgcccattgctttccttgcctggt 180
|||||||||||||||| |||||||| || |||||||||||||| || |||||||| ||||
Sbjct: 147 ggggctacgagatcctgatggggctcctgctgttcacgcccatcgcgttccttgcgtggt 206
Query: 181 tcccgttcgtgtccgagttccagaccaggatgctgttcaaccaggccttcagcagaggtc 240
|||| || |||||||||||||||||||||||||| ||||||||||| ||||||||||| |
Sbjct: 207 tcccctttgtgtccgagttccagaccaggatgcttttcaaccaggcgttcagcagaggcc 266
Query: 241 tgcagatctcccgtatcctgggaggacacaagaaagaccgagggacgcggagcaaggagt 300
||||||||||||||||||| || || |||||||| ||||||| || |||| ||||||||
Sbjct: 267 tgcagatctcccgtatcctcggcggccacaagaaggaccgagccacccggaacaaggagt 326
Query: 301 ag 302
||
Sbjct: 327 ag 328
>gb|DQ086484.1| Triticum aestivum putative 1,3-beta-glucan synthase 3 (GSL3) mRNA,
partial cds
Length = 481
Score = 289 bits (146), Expect = 1e-076
Identities = 248/282 (87%)
Strand = Plus / Plus
Query: 1 acatctttgtttgcatccttgccttcatgcccactggatggggtttgctcctgattgccc 60
||||||| || |||||||| ||||||||||| ||||||||||| |||| ||||||||||
Sbjct: 193 acatcttcgtctgcatcctcgccttcatgccgactggatggggcctgcttctgattgccc 252
Query: 61 aagctatcaggcctgtgattcaaaagatcgggctgtgggggtcgatcaaggctcttgccc 120
|||| |||| |||||| | | | | ||||||||||||||||| | |||||||| ||||
Sbjct: 253 aagcgatcaagcctgtcgtcgagatggtcgggctgtgggggtcggtgaaggctctcgccc 312
Query: 121 ggggctacgagatcctaatggggcttctcctgttcacgcccattgctttccttgcctggt 180
|||||||||||||||| |||||||| || |||||||||||||| || |||||||| ||||
Sbjct: 313 ggggctacgagatcctgatggggctcctgctgttcacgcccatcgcgttccttgcgtggt 372
Query: 181 tcccgttcgtgtccgagttccagaccaggatgctgttcaaccaggccttcagcagaggtc 240
|||| || |||||||||||||||||||||||||| ||||||||||| ||||||||||| |
Sbjct: 373 tcccctttgtgtccgagttccagaccaggatgcttttcaaccaggcgttcagcagaggcc 432
Query: 241 tgcagatctcccgtatcctgggaggacacaagaaagaccgag 282
||||||||||||||||||| || || |||||||| |||||||
Sbjct: 433 tgcagatctcccgtatcctcggcggccacaagaaggaccgag 474
>gb|BJ265301.1|BJ265301 BJ265301 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh21h03 3', mRNA sequence
Length = 686
Score = 281 bits (142), Expect = 3e-074
Identities = 262/302 (86%)
Strand = Plus / Minus
Query: 1 acatctttgtttgcatccttgccttcatgcccactggatggggtttgctcctgattgccc 60
||||||| || |||||||| ||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 617 acatcttcgtctgcatcctcgccttcatgccaactggatggggcttgcttctgattgccc 558
Query: 61 aagctatcaggcctgtgattcaaaagatcgggctgtgggggtcgatcaaggctcttgccc 120
|||| |||| ||||||| | | | | |||||||||||||||| | |||||||| ||||
Sbjct: 557 aagcgatcaagcctgtggtcgagatggtcgggctgtgggggtctgtgaaggctctcgccc 498
Query: 121 ggggctacgagatcctaatggggcttctcctgttcacgcccattgctttccttgcctggt 180
| ||||||||||| || |||||||| || |||||||||||||| || || || || ||||
Sbjct: 497 gtggctacgagattctcatggggctcctgctgttcacgcccatcgcgtttctcgcgtggt 438
Query: 181 tcccgttcgtgtccgagttccagaccaggatgctgttcaaccaggccttcagcagaggtc 240
|||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |
Sbjct: 437 tccccttcgtgtccgagttccagaccaggatgctcttcaaccaggcgttcagcagaggcc 378
Query: 241 tgcagatctcccgtatcctgggaggacacaagaaagaccgagggacgcggagcaaggagt 300
||||||||||||||||||| || || |||||||| ||||||| || |||| ||||||||
Sbjct: 377 tgcagatctcccgtatcctcggcggccacaagaaggaccgagccacccggaacaaggagt 318
Query: 301 ag 302
||
Sbjct: 317 ag 316
>gb|BJ267676.1|BJ267676 BJ267676 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh12m05 5', mRNA sequence
Length = 633
Score = 281 bits (142), Expect = 3e-074
Identities = 262/302 (86%)
Strand = Plus / Plus
Query: 1 acatctttgtttgcatccttgccttcatgcccactggatggggtttgctcctgattgccc 60
||||||| || |||||||| ||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 134 acatcttcgtctgcatcctcgccttcatgccaactggatggggcttgcttctgattgccc 193
Query: 61 aagctatcaggcctgtgattcaaaagatcgggctgtgggggtcgatcaaggctcttgccc 120
|||| |||| ||||||| | | | | |||||||||||||||| | |||||||| ||||
Sbjct: 194 aagcgatcaagcctgtggtcgagatggtcgggctgtgggggtctgtgaaggctctcgccc 253
Query: 121 ggggctacgagatcctaatggggcttctcctgttcacgcccattgctttccttgcctggt 180
| ||||||||||| || |||||||| || |||||||||||||| || || || || ||||
Sbjct: 254 gtggctacgagattctcatggggctcctgctgttcacgcccatcgcgtttctcgcgtggt 313
Query: 181 tcccgttcgtgtccgagttccagaccaggatgctgttcaaccaggccttcagcagaggtc 240
|||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |
Sbjct: 314 tccccttcgtgtccgagttccagaccaggatgctcttcaaccaggcgttcagcagaggcc 373
Query: 241 tgcagatctcccgtatcctgggaggacacaagaaagaccgagggacgcggagcaaggagt 300
||||||||||||||||||| || || |||||||| ||||||| || |||| ||||||||
Sbjct: 374 tgcagatctcccgtatcctcggcggccacaagaaggaccgagccacccggaacaaggagt 433
Query: 301 ag 302
||
Sbjct: 434 ag 435
>gb|BJ272623.1|BJ272623 BJ272623 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh12m05 3', mRNA sequence
Length = 678
Score = 281 bits (142), Expect = 3e-074
Identities = 262/302 (86%)
Strand = Plus / Minus
Query: 1 acatctttgtttgcatccttgccttcatgcccactggatggggtttgctcctgattgccc 60
||||||| || |||||||| ||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 625 acatcttcgtctgcatcctcgccttcatgccaactggatggggcttgcttctgattgccc 566
Query: 61 aagctatcaggcctgtgattcaaaagatcgggctgtgggggtcgatcaaggctcttgccc 120
|||| |||| ||||||| | | | | |||||||||||||||| | |||||||| ||||
Sbjct: 565 aagcgatcaagcctgtggtcgagatggtcgggctgtgggggtctgtgaaggctctcgccc 506
Query: 121 ggggctacgagatcctaatggggcttctcctgttcacgcccattgctttccttgcctggt 180
| ||||||||||| || |||||||| || |||||||||||||| || || || || ||||
Sbjct: 505 gtggctacgagattctcatggggctcctgctgttcacgcccatcgcgtttctcgcgtggt 446
Query: 181 tcccgttcgtgtccgagttccagaccaggatgctgttcaaccaggccttcagcagaggtc 240
|||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |
Sbjct: 445 tccccttcgtgtccgagttccagaccaggatgctcttcaaccaggcgttcagcagaggcc 386
Query: 241 tgcagatctcccgtatcctgggaggacacaagaaagaccgagggacgcggagcaaggagt 300
||||||||||||||||||| || || |||||||| ||||||| || |||| ||||||||
Sbjct: 385 tgcagatctcccgtatcctcggcggccacaagaaggaccgagccacccggaacaaggagt 326
Query: 301 ag 302
||
Sbjct: 325 ag 324
>gb|BJ259588.1|BJ259588 BJ259588 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh21h03 5', mRNA sequence
Length = 527
Score = 274 bits (138), Expect = 7e-072
Identities = 246/282 (87%)
Strand = Plus / Plus
Query: 1 acatctttgtttgcatccttgccttcatgcccactggatggggtttgctcctgattgccc 60
||||||| || |||||||| ||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 239 acatcttcgtctgcatcctcgccttcatgccaactggatggggcttgcttctgattgccc 298
Query: 61 aagctatcaggcctgtgattcaaaagatcgggctgtgggggtcgatcaaggctcttgccc 120
|||| |||| ||||||| | | | | |||||||||||||||| | |||||||| ||||
Sbjct: 299 aagcgatcaagcctgtggtcgagatggtcgggctgtgggggtctgtgaaggctctcgccc 358
Query: 121 ggggctacgagatcctaatggggcttctcctgttcacgcccattgctttccttgcctggt 180
| ||||||||||| || |||||||| || |||||||||||||| || || || || ||||
Sbjct: 359 gtggctacgagattctcatggggctcctgctgttcacgcccatcgcgtttctcgcgtggt 418
Query: 181 tcccgttcgtgtccgagttccagaccaggatgctgttcaaccaggccttcagcagaggtc 240
|||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |
Sbjct: 419 tccccttcgtgtccgagttccagaccaggatgctcttcaaccaggcgttcagcagaggcc 478
Query: 241 tgcagatctcccgtatcctgggaggacacaagaaagaccgag 282
||||||||||||||||||| || || |||||||| |||||||
Sbjct: 479 tgcagatctcccgtatcctcggcggccacaagaaggaccgag 520
>gb|CD934561.1|CD934561 OV.001G12R001002 OV Triticum aestivum cDNA clone OV001G12, mRNA
sequence
Length = 730
Score = 274 bits (138), Expect = 7e-072
Identities = 261/302 (86%)
Strand = Plus / Minus
Query: 1 acatctttgtttgcatccttgccttcatgcccactggatggggtttgctcctgattgccc 60
||||||| || |||||||| ||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 682 acatcttcgtctgcatcctcgccttcatgccaactggatggggcttgcttctgattgccc 623
Query: 61 aagctatcaggcctgtgattcaaaagatcgggctgtgggggtcgatcaaggctcttgccc 120
|||| |||| ||||||| | | | | |||||||||||||||| | |||||||| ||||
Sbjct: 622 aagcgatcaagcctgtggtcgagatggtcgggctgtgggggtctgtgaaggctctcgccc 563
Query: 121 ggggctacgagatcctaatggggcttctcctgttcacgcccattgctttccttgcctggt 180
| ||||||||||| || |||||||| || |||||||||||||| || || || || ||||
Sbjct: 562 gtggctacgagattctcatggggctcctgctgttcacgcccatcgcgtttctcgcgtggt 503
Query: 181 tcccgttcgtgtccgagttccagaccaggatgctgttcaaccaggccttcagcagaggtc 240
|||| ||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| |
Sbjct: 502 tccccttcgtgtccgagttccagaccaggatgctcttcaaccaggcgttcagcaaaggcc 443
Query: 241 tgcagatctcccgtatcctgggaggacacaagaaagaccgagggacgcggagcaaggagt 300
||||||||||||||||||| || || |||||||| ||||||| || |||| ||||||||
Sbjct: 442 tgcagatctcccgtatcctcggcggccacaagaaggaccgagccacccggaacaaggagt 383
Query: 301 ag 302
||
Sbjct: 382 ag 381
>gb|BQ236623.1|BQ236623 TaE05029A09F TaE05 Triticum aestivum cDNA clone TaE05029A09F, mRNA
sequence
Length = 587
Score = 252 bits (127), Expect = 2e-065
Identities = 193/215 (89%)
Strand = Plus / Minus
Query: 88 tcgggctgtgggggtcgatcaaggctcttgcccggggctacgagatcctaatggggcttc 147
||||||||||||||||| | |||||||| |||||||||||||||||||| |||||||| |
Sbjct: 584 tcgggctgtgggggtcggtgaaggctctcgcccggggctacgagatcctgatggggctcc 525
Query: 148 tcctgttcacgcccattgctttccttgcctggttcccgttcgtgtccgagttccagacca 207
| |||||||||||||| || |||||||| |||||||| || |||||||||||||||||||
Sbjct: 524 tgctgttcacgcccatcgcgttccttgcgtggttcccctttgtgtccgagttccagacca 465
Query: 208 ggatgctgttcaaccaggccttcagcagaggtctgcagatctcccgtatcctgggaggac 267
||||||| ||||||||||| ||||||||||| |||||||||||||||||||| || || |
Sbjct: 464 ggatgcttttcaaccaggcgttcagcagaggcctgcagatctcccgtatcctcggcggcc 405
Query: 268 acaagaaagaccgagggacgcggagcaaggagtag 302
||||||| ||||||| || |||| ||||||||||
Sbjct: 404 acaagaaggaccgagccacccggaacaaggagtag 370
>gb|CA617488.1|CA617488 wl1n.pk0020.b11 wl1n Triticum aestivum cDNA clone wl1n.pk0020.b11
5' end, mRNA sequence
Length = 591
Score = 250 bits (126), Expect = 1e-064
Identities = 204/226 (90%), Gaps = 3/226 (1%)
Strand = Plus / Plus
Query: 1 acatctttgtttgcatccttgccttcatgcccactggatggggtttgctcctgattgccc 60
|||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 185 acatatttgtttgcatccttgctttcatgcccactggatggggtttgctgctgattgccc 244
Query: 61 aagctatcaggcctgtgattcaaaagatcgggctgtgggggtcgatcaaggctcttgccc 120
|||| ||| |||||||||| || |||| ||||| ||||| |||||||||||||||||||
Sbjct: 245 aagcgatccggcctgtgatccacaagactgggctctggggctcgatcaaggctcttgccc 304
Query: 121 ggggctacgagatcctaatggggcttctcctgttcacgcccattgctttccttgcctggt 180
|||||||||||||||| ||||| |||||||||||||||||||| || ||||| |||||||
Sbjct: 305 ggggctacgagatcctgatgggacttctcctgttcacgcccatcgc-ttcctcgcctggt 363
Query: 181 tcccgttcgtgtccgagttccagaccaggatgctgttcaaccaggc 226
||||||||||||| || || |||| || ||||||||||||| ||||
Sbjct: 364 tcccgttcgtgtcggaatt-caga-caagatgctgttcaacaaggc 407
>gb|CD927326.1|CD927326 GR45.101M21R010607 GR45 Triticum aestivum cDNA clone GR45101M21,
mRNA sequence
Length = 567
Score = 244 bits (123), Expect = 6e-063
Identities = 192/215 (89%)
Strand = Plus / Minus
Query: 88 tcgggctgtgggggtcgatcaaggctcttgcccggggctacgagatcctaatggggcttc 147
||||||||||||| ||| | ||||| || |||||||||||||||||||| |||||||| |
Sbjct: 534 tcgggctgtggggttcggtgaaggccctcgcccggggctacgagatcctgatggggctcc 475
Query: 148 tcctgttcacgcccattgctttccttgcctggttcccgttcgtgtccgagttccagacca 207
| |||||||||||||| || ||||| || |||||||||||||||||||||||||||||||
Sbjct: 474 tgctgttcacgcccatcgcgttcctcgcgtggttcccgttcgtgtccgagttccagacca 415
Query: 208 ggatgctgttcaaccaggccttcagcagaggtctgcagatctcccgtatcctgggaggac 267
||||||| ||||||||||| ||||||||||| |||||||||||||||||||| || || |
Sbjct: 414 ggatgctcttcaaccaggcgttcagcagaggcctgcagatctcccgtatcctcggcgggc 355
Query: 268 acaagaaagaccgagggacgcggagcaaggagtag 302
||||||| ||||||| || |||| ||||||||||
Sbjct: 354 acaagaaggaccgagccacccggaacaaggagtag 320
>gb|CA613808.1|CA613808 wr1.pk0157.a9 wr1 Triticum aestivum cDNA clone wr1.pk0157.a9 5'
end, mRNA sequence
Length = 404
Score = 182 bits (92), Expect = 2e-044
Identities = 146/164 (89%)
Strand = Plus / Plus
Query: 139 tggggcttctcctgttcacgcccattgctttccttgcctggttcccgttcgtgtccgagt 198
||||||| || |||||||||||||| || |||||||| |||||||| || ||||||||||
Sbjct: 1 tggggctcctgctgttcacgcccatcgcgttccttgcgtggttcccctttgtgtccgagt 60
Query: 199 tccagaccaggatgctgttcaaccaggccttcagcagaggtctgcagatctcccgtatcc 258
|||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 61 tccagaccaggatgcttttcaaccaggcgttcagcagaggcctgcagatctcccgtatcc 120
Query: 259 tgggaggacacaagaaagaccgagggacgcggagcaaggagtag 302
| || || |||||||| ||||||| || |||| ||||||||||
Sbjct: 121 tcggcggccacaagaaggaccgagccacccggaacaaggagtag 164
>gb|BQ170786.1|BQ170786 WHE2305_E08_I15ZT Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2305_E08_I15, mRNA sequence
Length = 534
Score = 172 bits (87), Expect = 2e-041
Identities = 132/147 (89%)
Strand = Plus / Minus
Query: 156 acgcccattgctttccttgcctggttcccgttcgtgtccgagttccagaccaggatgctg 215
|||||||| || ||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 534 acgcccatcgcgttcctcgcgtggttcccgttcgtgtccgagttccagaccaggatgctc 475
Query: 216 ttcaaccaggccttcagcagaggtctgcagatctcccgtatcctgggaggacacaagaaa 275
||||||||||| ||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 474 ttcaaccaggcgttcagcagaggcctgcagatctcccgtatcctcggcgggcacaagaag 415
Query: 276 gaccgagggacgcggagcaaggagtag 302
||||||| || |||| ||||||||||
Sbjct: 414 gaccgagccacccggaacaaggagtag 388
>gb|CD927659.1|CD927659 GR45.102M21F010315 GR45 Triticum aestivum cDNA clone GR45102M21,
mRNA sequence
Length = 706
Score = 147 bits (74), Expect = 1e-033
Identities = 140/162 (86%)
Strand = Plus / Plus
Query: 1 acatctttgtttgcatccttgccttcatgcccactggatggggtttgctcctgattgccc 60
||||||| || |||||||| ||||||||||| ||||||||||| |||| ||||||||||
Sbjct: 545 acatcttcgtctgcatcctcgccttcatgccgactggatggggcctgcttctgattgccc 604
Query: 61 aagctatcaggcctgtgattcaaaagatcgggctgtgggggtcgatcaaggctcttgccc 120
|||| |||| |||||| || | | | ||||||||||||||||| | ||||| || ||||
Sbjct: 605 aagcgatcaagcctgtcgttgagatggtcgggctgtgggggtcggtgaaggccctcgccc 664
Query: 121 ggggctacgagatcctaatggggcttctcctgttcacgccca 162
|||||||||||||||| |||||||| || |||||||||||||
Sbjct: 665 ggggctacgagatcctgatggggctcctgctgttcacgccca 706
>gb|CK154392.1|CK154392 FGAS033093 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 931
Score = 139 bits (70), Expect = 3e-031
Identities = 108/122 (88%)
Strand = Plus / Minus
Query: 138 atggggcttctcctgttcacgcccattgctttccttgcctggttcccgttcgtgtccgag 197
|||||||| || |||||||||||||| || || || || |||||||| ||||||||||||
Sbjct: 746 atggggctcctgctgttcacgcccatcgcgtttctcgcgtggttcccnttcgtgtccgag 687
Query: 198 ttccagaccaggatgctgttcaaccaggccttcagcagaggtctgcagatctcccgtatc 257
||||||||||||||||| |||||||||| ||||||||||| ||||||||||| |||||
Sbjct: 686 ttccagaccaggatgctcntcaaccaggcgttcagcagaggcntgcagatctccngtatc 627
Query: 258 ct 259
||
Sbjct: 626 ct 625
>gb|DR432259.1|DR432259 441E-AH2 Line 441 epidermal library Triticum monococcum cDNA, mRNA
sequence
Length = 649
Score = 129 bits (65), Expect = 2e-028
Identities = 156/185 (84%), Gaps = 1/185 (0%)
Strand = Plus / Plus
Query: 90 gggctgtgggggtcgatcaaggctcttgcccggggctacgagatcctaatggggcttctc 149
|||||||||||||||||| ||| || || || || ||||||||| | |||||||| ||
Sbjct: 375 gggctgtgggggtcgatccgggcgctggctcgtgggtacgagatcatcatggggctgctg 434
Query: 150 ctgttcacgcccattgctttccttgcctggttcccgttcgtgtccgagttccagaccagg 209
|| ||||| || || || ||||| || ||||||||||||||||| |||||||||||| ||
Sbjct: 435 ctcttcaccccgatcgcgttcctggcgtggttcccgttcgtgtctgagttccagacc-gg 493
Query: 210 atgctgttcaaccaggccttcagcagaggtctgcagatctcccgtatcctgggaggacac 269
||||| |||||||||||||||||| | || ||||||||||| | |||||||| || |||
Sbjct: 494 atgctcttcaaccaggccttcagccgtgggctgcagatctcgaggatcctgggcgggcac 553
Query: 270 aagaa 274
|||||
Sbjct: 554 aagaa 558
Score = 52.0 bits (26), Expect = 5e-005
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 1 acatctttgtttgcatccttgccttcatgcccactggatggggtttgctcctgattgc 58
|||| ||||| |||||||| ||||||||||| || |||||||| |||||||| ||||
Sbjct: 286 acatatttgtctgcatcctcgccttcatgccgacgggatggggcctgctcctggttgc 343
>gb|CA612893.1|CA612893 wr1.pk0160.a2 wr1 Triticum aestivum cDNA clone wr1.pk0160.a2 5'
end, mRNA sequence
Length = 691
Score = 125 bits (63), Expect = 4e-027
Identities = 174/206 (84%), Gaps = 4/206 (1%)
Strand = Plus / Plus
Query: 1 acatctttgtttgcatccttgccttcatgcccactgg-atggggtttgctcctgattgcc 59
||||||| || |||||||| ||||||||||| ||||| |||||| |||| |||||||||
Sbjct: 266 acatcttcgtctgcatcctcgccttcatgccgactgggatggggcctgcttctgattgcc 325
Query: 60 caagctatcaggcctgtgattcaaaagatcgggctgtgggggtcgatcaaggctcttgcc 119
||||| |||| |||||| | | | | ||||||||||||||||| | || | ||| |||
Sbjct: 326 caagcgatcaagcctgtcgtcgagatggtcgggctgtgggggtcggtgaaagntctcgcc 385
Query: 120 cggggctacgagatcctaatggggcttctcctgttcacgcccattgctttccttgcctgg 179
||||||||||||||||| |||||| | || |||||||| ||||| || |||||||| |||
Sbjct: 386 cggggctacgagatcctgatgggg-tcctgctgttcac-cccatcgcgttccttgcgtgg 443
Query: 180 ttcccgttcgtgtccgagttccagac 205
||||| || |||||||||||||||||
Sbjct: 444 ttccc-tttgtgtccgagttccagac 468
>gb|BQ905728.1|BQ905728 Ta04_17p23_R
Ta04_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta04_17p23, mRNA
sequence
Length = 351
Score = 123 bits (62), Expect = 2e-026
Identities = 107/124 (86%)
Strand = Plus / Minus
Query: 179 gttcccgttcgtgtccgagttccagaccaggatgctgttcaaccaggccttcagcagagg 238
|||||| || |||||||||| ||||||||||||||| |||||||||| ||||| |||||
Sbjct: 348 gttcccctttgtgtccgagtwccagaccaggatgcttrtcaaccaggcgttcagmagagg 289
Query: 239 tctgcagatctcccgtatcctgggaggacacaagaaagaccgagggacgcggagcaagga 298
|||||||| ||||||||||| || || |||||||| ||||||| || |||| ||||||
Sbjct: 288 cctgcagatmtcccgtatcctcggcggccacaagaaggaccgagccacccggaacaagga 229
Query: 299 gtag 302
||||
Sbjct: 228 gtag 225
>gb|BJ208630.1|BJ208630 BJ208630 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh10a17 5', mRNA sequence
Length = 451
Score = 115 bits (58), Expect = 4e-024
Identities = 133/158 (84%)
Strand = Plus / Plus
Query: 90 gggctgtgggggtcgatcaaggctcttgcccggggctacgagatcctaatggggcttctc 149
|||||||||||||||||| || || || || || ||||||||| | |||||||| ||
Sbjct: 294 gggctgtgggggtcgatccgtgcgctggctcgtgggtacgagatcatcatggggctgctg 353
Query: 150 ctgttcacgcccattgctttccttgcctggttcccgttcgtgtccgagttccagaccagg 209
|| ||||| || || || ||||| || ||||||||||||||||| |||||||||||| ||
Sbjct: 354 ctcttcaccccgatcgcgttcctggcgtggttcccgttcgtgtcggagttccagacccgg 413
Query: 210 atgctgttcaaccaggccttcagcagaggtctgcagat 247
||||| |||||||||||||||||| | || ||||||||
Sbjct: 414 atgctcttcaaccaggccttcagccgtgggctgcagat 451
>gb|CA612946.1|CA612946 wr1.pk0149.f7 wr1 Triticum aestivum cDNA clone wr1.pk0149.f7 5'
end, mRNA sequence
Length = 495
Score = 97.6 bits (49), Expect = 9e-019
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 177 tggttcccgttcgtgtccgagttccagaccaggatgctgttcaaccaggccttcagcaga 236
|||||||| ||||| |||||||||||||| ||||||||||||||||||| ||||| |||
Sbjct: 61 tggttccccttcgtctccgagttccagacgcggatgctgttcaaccaggcgttcagtaga 120
Query: 237 ggtctgcagatctcccg 253
||||||||||| |||||
Sbjct: 121 ggtctgcagatttcccg 137
>gb|BF199676.1|BF199676 WHE0591-0594_I13_I13ZE Triticum monococcum vegetative apex cDNA
library Triticum monococcum cDNA clone
WHE0591-0594_I13_I13, mRNA sequence
Length = 380
Score = 93.7 bits (47), Expect = 1e-017
Identities = 77/87 (88%)
Strand = Plus / Plus
Query: 216 ttcaaccaggccttcagcagaggtctgcagatctcccgtatcctgggaggacacaagaaa 275
||||||||||| ||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 4 ttcaaccaggcgttcagcagaggcctgcagatctcccgtatcctcggcggccacaagaag 63
Query: 276 gaccgagggacgcggagcaaggagtag 302
||||||| || |||| ||||||||||
Sbjct: 64 gaccgagccacccggaacaaggagtag 90
>gb|BG607810.1|BG607810 WHE2487_G04_M07ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2487_G04_M07,
mRNA sequence
Length = 480
Score = 93.7 bits (47), Expect = 1e-017
Identities = 77/87 (88%)
Strand = Plus / Plus
Query: 216 ttcaaccaggccttcagcagaggtctgcagatctcccgtatcctgggaggacacaagaaa 275
||||||||||| ||||||||||| |||||||||||||||||||| || || ||||||||
Sbjct: 4 ttcaaccaggcgttcagcagaggcctgcagatctcccgtatcctcggcggccacaagaag 63
Query: 276 gaccgagggacgcggagcaaggagtag 302
||||||| || |||| ||||||||||
Sbjct: 64 gaccgagccacccggaacaaggagtag 90
>gb|CK153351.1|CK153351 FGAS031946 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 869
Score = 89.7 bits (45), Expect = 2e-016
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 177 tggttcccgttcgtgtccgagttccagaccaggatgctgttcaaccaggccttcagcaga 236
|||||||| ||||| |||||||||||||| ||||||||||||||||||| ||||| |||
Sbjct: 380 tggttccccttcgtctccgagttccagacgcggatgctgttcaaccaggcattcagtaga 439
Query: 237 ggtctgcagatctcccg 253
|| |||||||| |||||
Sbjct: 440 ggactgcagatttcccg 456
>gb|CV768769.1|CV768769 FGAS063160 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 852
Score = 89.7 bits (45), Expect = 2e-016
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 177 tggttcccgttcgtgtccgagttccagaccaggatgctgttcaaccaggccttcagcaga 236
|||||||| ||||| |||||||||||||| ||||||||||||||||||| ||||| |||
Sbjct: 331 tggttccccttcgtctccgagttccagacgcggatgctgttcaaccaggcattcagtaga 390
Query: 237 ggtctgcagatctcccg 253
|| |||||||| |||||
Sbjct: 391 ggactgcagatttcccg 407
>gb|CK154616.1|CK154616 FGAS033318 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 847
Score = 87.7 bits (44), Expect = 8e-016
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 199 tccagaccaggatgctgttcaaccaggccttcagcagaggtctgcagatctcccgtatc 257
|||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 686 tccagaccaggatgctcntcaaccaggcgttcagcagaggcctgcagatctcccgtatc 628
>gb|CK207448.1|CK207448 FGAS019071 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1129
Score = 81.8 bits (41), Expect = 5e-014
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 177 tggttcccgttcgtgtccgagttccagaccaggatgctgttcaaccaggccttcagcaga 236
|||||||| ||||| |||||||| ||||| ||||||||||||||||||| ||||| |||
Sbjct: 730 tggttccccttcgtctccgagtttcagacgcggatgctgttcaaccaggcattcagtaga 789
Query: 237 ggtctgcagatctcccg 253
|| |||||||| |||||
Sbjct: 790 ggactgcagatttcccg 806
>gb|CD490322.1|CD490322 WHE2494_D06_H12ZT Triticum monococcum DV92 early reproductive apex
cDNA library Triticum monococcum cDNA clone
WHE2494_D06_H12, mRNA sequence
Length = 421
Score = 75.8 bits (38), Expect = 3e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 192 tccgagttccagaccaggatgctgttcaaccaggccttcagcagaggtctgcagatctcc 251
|||||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| |||
Sbjct: 420 tccgagttccagacgcggatgctgttcaaccaggcgttcagtagaggactgcagatttcc 361
Query: 252 cg 253
||
Sbjct: 360 cg 359
>gb|BE492039.1|BE492039 WHE0552_B02_B02ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE0552_B02_B02, mRNA
sequence
Length = 524
Score = 65.9 bits (33), Expect = 3e-009
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 177 tggttcccgttcgtgtccgagttccagaccaggatgctgttcaaccaggccttcagcaga 236
|||||||| || |||||| ||||||| | | |||||||||||||||||||||||| |
Sbjct: 124 tggttcccctttgtgtccacgttccagtcgcgcatgctgttcaaccaggccttcagccgt 183
Query: 237 ggtctgcagatctcccgtatcctgg 261
|||||| ||||||||| |||||||
Sbjct: 184 ggtctggagatctccctcatcctgg 208
>gb|CK154494.1|CK154494 FGAS033196 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 890
Score = 63.9 bits (32), Expect = 1e-008
Identities = 76/88 (86%), Gaps = 2/88 (2%)
Strand = Plus / Minus
Query: 197 gttccagacc-aggatgctgttcaaccaggcc-ttcagcagaggtctgcagatctcccgt 254
|||||||||| |||||||| || ||||| ||| |||| |||||| |||||||||||||||
Sbjct: 691 gttccagacccaggatgctcttgaaccacgccgttcaccagaggcctgcagatctcccgt 632
Query: 255 atcctgggaggacacaagaaagaccgag 282
||||| | || |||||||| |||||||
Sbjct: 631 atcctcgccggccacaagaaggaccgag 604
>gb|BJ211685.1|BJ211685 BJ211685 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh32i15 5', mRNA sequence
Length = 342
Score = 61.9 bits (31), Expect = 5e-008
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 12 tgcatccttgccttcatgcccactggatgggg-tttgctcctgattgcccaagctatca 69
|||||||| ||||||||||| ||||||||||| ||||| |||||||||||||| ||||
Sbjct: 280 tgcatcctcgccttcatgccgactggatggggccttgcttctgattgcccaagcgatca 338
>gb|BE428096.1|BE428096 MTD003.C04F990615 ITEC MTD Durum Wheat Root Library Triticum
turgidum subsp. durum cDNA clone MTD003.C04, mRNA
sequence
Length = 399
Score = 58.0 bits (29), Expect = 8e-007
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 213 ctgttcaaccaggccttcagcagaggtctgcagatctcccgtatcctgg 261
||||||||||||||||||||| | |||||| ||||||||| |||||||
Sbjct: 233 ctgttcaaccaggccttcagccgtggtctggagatctccctcatcctgg 281
>gb|BJ274419.1|BJ274419 BJ274419 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh22b10 3', mRNA sequence
Length = 757
Score = 58.0 bits (29), Expect = 8e-007
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 213 ctgttcaaccaggccttcagcagaggtctgcagatctcccgtatcctgg 261
||||||||||||||||||||| | |||||| ||||||||| |||||||
Sbjct: 305 ctgttcaaccaggccttcagccgtggtctggagatctccctcatcctgg 257
>gb|AL820316.1|AL820316 AL820316 N:130 Triticum aestivum cDNA clone H03_N130_plate_28, mRNA
sequence
Length = 437
Score = 58.0 bits (29), Expect = 8e-007
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 213 ctgttcaaccaggccttcagcagaggtctgcagatctcccgtatcctgg 261
||||||||||||||||||||| | |||||| ||||||||| |||||||
Sbjct: 82 ctgttcaaccaggccttcagccgtggtctggagatctccctcatcctgg 130
>gb|CA499643.1|CA499643 WHE4009_G12_M23ZT Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4009_G12_M23, mRNA sequence
Length = 554
Score = 58.0 bits (29), Expect = 8e-007
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 213 ctgttcaaccaggccttcagcagaggtctgcagatctcccgtatcctgg 261
||||||||||||||||||||| | |||||| ||||||||| |||||||
Sbjct: 427 ctgttcaaccaggccttcagccgtggtctggagatctccctcatcctgg 475
>gb|CA660459.1|CA660459 wlm1.pk0019.f4 wlm1 Triticum aestivum cDNA clone wlm1.pk0019.f4 5'
end, mRNA sequence
Length = 515
Score = 58.0 bits (29), Expect = 8e-007
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 213 ctgttcaaccaggccttcagcagaggtctgcagatctcccgtatcctgg 261
||||||||||||||||||||| | |||||| ||||||||| |||||||
Sbjct: 100 ctgttcaaccaggccttcagccgtggtctggagatctccctcatcctgg 52
>gb|CA667704.1|CA667704 wlsu1.pk017.p1 wlsu1 Triticum aestivum cDNA clone wlsu1.pk017.p1 5'
end, mRNA sequence
Length = 461
Score = 58.0 bits (29), Expect = 8e-007
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 213 ctgttcaaccaggccttcagcagaggtctgcagatctcccgtatcctgg 261
||||||||||||||||||||| | |||||| ||||||||| |||||||
Sbjct: 315 ctgttcaaccaggccttcagccgtggtctggagatctccctcatcctgg 363
>gb|CD454191.1|CD454191 WHE0991-0994_B23_B23ZT CS wheat pre-anthesis spike cDNA library
Triticum aestivum cDNA clone WHE0991-0994_B23_B23, mRNA
sequence
Length = 762
Score = 58.0 bits (29), Expect = 8e-007
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 213 ctgttcaaccaggccttcagcagaggtctgcagatctcccgtatcctgg 261
||||||||||||||||||||| | |||||| ||||||||| |||||||
Sbjct: 313 ctgttcaaccaggccttcagccgtggtctggagatctccctcatcctgg 265
>gb|CD938994.1|CD938994 OV.111N14F010309 OV Triticum aestivum cDNA clone OV111N14, mRNA
sequence
Length = 508
Score = 58.0 bits (29), Expect = 8e-007
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 213 ctgttcaaccaggccttcagcagaggtctgcagatctcccgtatcctgg 261
||||||||||||||||||||| | |||||| ||||||||| |||||||
Sbjct: 142 ctgttcaaccaggccttcagccgtggtctggagatctccctcatcctgg 190
>gb|DQ086487.1| Triticum aestivum putative 1,3-beta-glucan synthase 12 (GSL12)
mRNA, partial cds
Length = 527
Score = 58.0 bits (29), Expect = 8e-007
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 213 ctgttcaaccaggccttcagcagaggtctgcagatctcccgtatcctgg 261
||||||||||||||||||||| | |||||| ||||||||| |||||||
Sbjct: 251 ctgttcaaccaggccttcagccgtggtctggagatctccctcatcctgg 299
>gb|BQ904431.1|BQ904431 Ta04_03h09_R
Ta04_AAFC_ECORC_Fusarium_graminearum_inoculated_wheat_he
ads Triticum aestivum cDNA clone Ta04_03h09, mRNA
sequence
Length = 303
Score = 56.0 bits (28), Expect = 3e-006
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 233 cagaggtctgcagatctcccgtatcctgggaggacacaagaaagaccgag 282
|||||| ||||||||||||||||||| || || |||||||| |||||||
Sbjct: 297 cagaggcctgcagatctcccgtatccycggcggccacaagaaggaccgag 248
>gb|BJ273587.1|BJ273587 BJ273587 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh17p13 3', mRNA sequence
Length = 509
Score = 54.0 bits (27), Expect = 1e-005
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 215 gttcaaccaggccttcagcagaggtctgcagatctcccg 253
|||||||||||| ||||| |||||||||||||| |||||
Sbjct: 508 gttcaaccaggcgttcagtagaggtctgcagatttcccg 470
>gb|CL902396.1|CL902396 CSHC1771 1639HC library Triticum aestivum genomic clone
1639HC09C14, DNA sequence
Length = 437
Score = 52.0 bits (26), Expect = 5e-005
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 177 tggttcccgttcgtgtccgagttccagaccaggatgctgttcaaccaggccttcagcaga 236
|||||||| ||| |||| ||||||||||| | |||| |||||||| ||||||||| |
Sbjct: 228 tggttccccttcatgtcagagttccagacgcgtctgctcttcaaccaagccttcagccgg 287
Query: 237 ggtctgcagatctc 250
|| |||||||||||
Sbjct: 288 ggcctgcagatctc 301
>gb|CD452820.1|CD452820 WHE1132_C10_F20ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1132_C10_F20,
mRNA sequence
Length = 715
Score = 52.0 bits (26), Expect = 5e-005
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 177 tggttcccgttcgtgtccgagttccagaccaggatgctgttcaaccaggccttcagcaga 236
|||||||| ||| |||| ||||||||||| | |||| |||||||| ||||||||| |
Sbjct: 313 tggttccccttcatgtcagagttccagacgcgtctgctcttcaaccaagccttcagccgg 254
Query: 237 ggtctgcagatctc 250
|| |||||||||||
Sbjct: 253 ggcctgcagatctc 240
>gb|BG607488.1|BG607488 WHE2494_D06_H12ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2494_D06_H12,
mRNA sequence
Length = 379
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 213 ctgttcaaccaggccttcagcagaggtctgcagatctcccg 253
|||||||||||||| ||||| ||||| |||||||| |||||
Sbjct: 1 ctgttcaaccaggcgttcagtagaggactgcagatttcccg 41
>gb|CA668899.1|CA668899 wlsu1.pk023.i2 wlsu1 Triticum aestivum cDNA clone wlsu1.pk023.i2 5'
end, mRNA sequence
Length = 500
Score = 50.1 bits (25), Expect = 2e-004
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 213 ctgttcaaccaggccttcagcagaggtctgcagatctcccgtatcctgg 261
|||||||||||||| |||||||||||| || |||| |||| |||||||
Sbjct: 392 ctgttcaaccaggctttcagcagaggtttggagatttccctcatcctgg 344
>gb|BJ273393.1|BJ273393 BJ273393 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh17b01 3', mRNA sequence
Length = 468
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 213 ctgttcaaccaggccttcagcagaggt 239
|||||||||||||| ||||||||||||
Sbjct: 177 ctgttcaaccaggctttcagcagaggt 151
>gb|CA650294.1|CA650294 wre1n.pk0150.g10 wre1n Triticum aestivum cDNA clone
wre1n.pk0150.g10 5' end, mRNA sequence
Length = 435
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 213 ctgttcaaccaggccttcagcagaggt 239
|||||||||||||| ||||||||||||
Sbjct: 254 ctgttcaaccaggctttcagcagaggt 280
>gb|CA667480.1|CA667480 wlsu1.pk015.b6 wlsu1 Triticum aestivum cDNA clone wlsu1.pk015.b6 5'
end, mRNA sequence
Length = 455
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 213 ctgttcaaccaggccttcagcagaggt 239
|||||||||||||| ||||||||||||
Sbjct: 143 ctgttcaaccaggctttcagcagaggt 169
>gb|CA669387.1|CA669387 wlsu1.pk022.h13 wlsu1 Triticum aestivum cDNA clone wlsu1.pk022.h13
5' end, mRNA sequence
Length = 437
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 213 ctgttcaaccaggccttcagcagaggt 239
|||||||||||||| ||||||||||||
Sbjct: 390 ctgttcaaccaggctttcagcagaggt 364
>gb|CA670118.1|CA670118 wlsu1.pk025.m7 wlsu1 Triticum aestivum cDNA clone wlsu1.pk025.m7 5'
end, mRNA sequence
Length = 460
Score = 46.1 bits (23), Expect = 0.003
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 213 ctgttcaaccaggccttcagcagaggt 239
|||||||||||||| ||||||||||||
Sbjct: 127 ctgttcaaccaggctttcagcagaggt 153
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 86,282
Number of Sequences: 636343
Number of extensions: 86282
Number of successful extensions: 23965
Number of sequences better than 0.5: 54
Number of HSP's better than 0.5 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 23875
Number of HSP's gapped (non-prelim): 76
length of query: 620
length of database: 367,240,239
effective HSP length: 19
effective length of query: 601
effective length of database: 355,149,722
effective search space: 213444982922
effective search space used: 213444982922
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)