BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBTB.068P22F020924.3.1
(714 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW266827.1|CW266827 104_736_11232643_116_35281_068 Sorgh... 117 1e-024
gb|CD431595.1|CD431595 ETH1_9_C02.g1_A002 Ethylene-treated ... 117 1e-024
gb|CX607263.1|CX607263 ANR1_7_C10.g1_A002 Anaerobic roots S... 117 1e-024
gb|BG158894.1|BG158894 RHIZ2_42_A04.b1_A003 Rhizome2 (RHIZ2... 111 9e-023
gb|BG560042.1|BG560042 RHIZ2_68_F12.b1_A003 Rhizome2 (RHIZ2... 111 9e-023
gb|CW107789.1|CW107789 104_478_11096786_116_34486_011 Sorgh... 109 4e-022
gb|AW672547.1|AW672547 LG1_360_B08.b1_A002 Light Grown 1 (L... 109 4e-022
gb|BZ334181.1|BZ334181 hx77d04.b1 WGS-SbicolorF (JM107 adap... 107 1e-021
gb|CL173229.1|CL173229 104_376_10890731_116_31795_251 Sorgh... 107 1e-021
gb|CW083793.1|CW083793 104_426_10945388_114_32377_078 Sorgh... 107 1e-021
gb|CW102900.1|CW102900 104_471_11011592_116_34427_026 Sorgh... 107 1e-021
gb|CW279963.1|CW279963 104_755_11407362_116_35442_079 Sorgh... 107 1e-021
gb|CW313880.1|CW313880 104_804_11471525_116_35792_025 Sorgh... 107 1e-021
gb|CW326190.1|CW326190 104_821_11478088_148_36068_058 Sorgh... 107 1e-021
gb|CW384309.1|CW384309 fsbb001f067e14f0 Sorghum methylation... 107 1e-021
gb|CW415909.1|CW415909 fsbb001f116d13k0 Sorghum methylation... 107 1e-021
gb|CW476948.1|CW476948 fsbb001f234a17f0 Sorghum methylation... 107 1e-021
gb|CW483968.1|CW483968 fsbb001f245n20f0 Sorghum methylation... 107 1e-021
gb|CW483969.1|CW483969 fsbb001f245n20k0 Sorghum methylation... 107 1e-021
gb|BE125894.1|BE125894 DG1_59_C09.b1_A002 Dark Grown 1 (DG1... 107 1e-021
gb|BE598276.1|BE598276 PI1_68_C04.b1_A002 Pathogen induced ... 107 1e-021
gb|BF421937.1|BF421937 FM1_9_D05.b2_A003 Floral-Induced Mer... 107 1e-021
gb|BG158865.1|BG158865 RHIZ2_43_E08.b1_A003 Rhizome2 (RHIZ2... 107 1e-021
gb|BG556607.1|BG556607 EM1_37_D01.b1_A002 Embryo 1 (EM1) So... 107 1e-021
gb|BI074682.1|BI074682 IP1_14_C08.b1_A002 Immature pannicle... 107 1e-021
gb|BI074689.1|BI074689 IP1_14_C07.b1_A002 Immature pannicle... 107 1e-021
gb|BI245986.1|BI245986 IP1_66_C04.b1_A002 Immature pannicle... 107 1e-021
gb|CD206895.1|CD206895 HS1_25_H10.g1_A012 Heat-shocked seed... 107 1e-021
gb|CD226596.1|CD226596 CCC1_46_H04.g1_A007 Callus culture/c... 107 1e-021
gb|CD423186.1|CD423186 SA1_27_D11.g1_A002 Salicylic acid-tr... 107 1e-021
gb|CD428300.1|CD428300 ETH1_28_A07.g1_A002 Ethylene-treated... 103 2e-020
gb|BE125854.1|BE125854 DG1_58_F09.b1_A002 Dark Grown 1 (DG1... 101 9e-020
gb|BE358380.1|BE358380 DG1_29_D10.b1_A002 Dark Grown 1 (DG1... 101 9e-020
gb|BE359864.1|BE359864 DG1_58_F09.b2_A002 Dark Grown 1 (DG1... 101 9e-020
gb|BE594718.1|BE594718 PI1_36_F10.b1_A002 Pathogen induced ... 101 9e-020
gb|BE594741.1|BE594741 PI1_36_H12.b1_A002 Pathogen induced ... 101 9e-020
gb|BG412666.1|BG412666 OV2_33_C06.b1_A002 Ovary 2 (OV2) Sor... 101 9e-020
gb|BG463570.1|BG463570 EM1_50_B12.b1_A002 Embryo 1 (EM1) So... 101 9e-020
gb|BG463610.1|BG463610 EM1_50_G02.b1_A002 Embryo 1 (EM1) So... 101 9e-020
gb|CB925938.1|CB925938 ABA1_30_E05.g1_A012 Abscisic acid-tr... 101 9e-020
gb|CN134613.1|CN134613 OX1_27_A02.g1_A002 Oxidatively-stres... 101 9e-020
gb|CW066870.1|CW066870 104_314_10523918_114_30126 Sorghum m... 100 3e-019
gb|CW186169.1|CW186169 104_604_11166426_148_36711_079 Sorgh... 100 3e-019
gb|CW222337.1|CW222337 104_657_11202321_148_37175_035 Sorgh... 100 3e-019
gb|CW251115.1|CW251115 104_713_11223755_148_35058_038 Sorgh... 100 3e-019
gb|CW326189.1|CW326189 104_821_11478088_116_36069_058 Sorgh... 100 3e-019
gb|CW457559.1|CW457559 fsbb001f203g22k0 Sorghum methylation... 100 3e-019
gb|BE360362.1|BE360362 DG1_63_C04.b1_A002 Dark Grown 1 (DG1... 100 3e-019
gb|BG412064.1|BG412064 OV2_37_E11.b1_A002 Ovary 2 (OV2) Sor... 100 3e-019
gb|CD220505.1|CD220505 CCC1_67_D11.g1_A007 Callus culture/c... 100 3e-019
gb|CD224679.1|CD224679 CCC1_35_H08.g1_A007 Callus culture/c... 100 3e-019
gb|CD428950.1|CD428950 ETH1_1_G05.g1_A002 Ethylene-treated ... 100 3e-019
gb|CD461961.1|CD461961 SA1_31_B08.g1_A002 Salicylic acid-tr... 100 3e-019
gb|CX606571.1|CX606571 ANR1_3_F10.g1_A002 Anaerobic roots S... 100 3e-019
gb|CX617731.1|CX617731 GABR1_35_A09.g1_A002 GA- or brassino... 100 3e-019
gb|BZ331389.1|BZ331389 hw08c03.b1 WGS-SbicolorF (JM107 adap... 98 1e-018
gb|BZ351723.1|BZ351723 hw05h07.g1 WGS-SbicolorF (JM107 adap... 98 1e-018
gb|CW141553.1|CW141553 104_532_11136372_116_34935_040 Sorgh... 98 1e-018
gb|AW563848.1|AW563848 LG1_272_H04.b1_A002 Light Grown 1 (L... 98 1e-018
gb|BE596574.1|BE596574 PI1_57_H04.b1_A002 Pathogen induced ... 98 1e-018
gb|BG241063.1|BG241063 OV1_37_G03.b1_A002 Ovary 1 (OV1) Sor... 98 1e-018
gb|BG463884.1|BG463884 EM1_52_A09.b1_A002 Embryo 1 (EM1) So... 98 1e-018
gb|BG465035.1|BG465035 EM1_35_D03.b1_A002 Embryo 1 (EM1) So... 98 1e-018
gb|BG739518.1|BG739518 EM1_81_H07.b1_A002 Embryo 1 (EM1) So... 96 5e-018
gb|BE599900.1|BE599900 PI1_77_C12.b1_A002 Pathogen induced ... 94 2e-017
gb|CD226302.1|CD226302 CCC1_44_D02.g1_A007 Callus culture/c... 94 2e-017
gb|CX622387.1|CX622387 GABR1_63_D12.g2_A002 GA- or brassino... 94 2e-017
gb|CX623293.1|CX623293 GABR1_68_G09.g1_A002 GA- or brassino... 94 2e-017
gb|BZ339830.1|BZ339830 ic35b04.g1 WGS-SbicolorF (JM107 adap... 92 8e-017
gb|CW072408.1|CW072408 104_325_10592250_114_30538 Sorghum m... 92 8e-017
gb|CW121078.1|CW121078 104_498_11109693_116_34651_083 Sorgh... 92 8e-017
gb|CW148262.1|CW148262 104_542_11140322_116_35001_001 Sorgh... 92 8e-017
gb|CW148263.1|CW148263 104_542_11140322_148_35005_001 Sorgh... 92 8e-017
gb|CW158036.1|CW158036 104_561_11147839_116_36391_022 Sorgh... 92 8e-017
gb|CW158037.1|CW158037 104_561_11147839_148_36392_022 Sorgh... 92 8e-017
gb|CW190196.1|CW190196 104_611_11174374_116_36748_083 Sorgh... 92 8e-017
gb|CW239903.1|CW239903 104_698_11217913_148_37522_009 Sorgh... 92 8e-017
gb|CW322771.1|CW322771 104_816_11476276_148_35951_004 Sorgh... 92 8e-017
gb|CW339062.1|CW339062 104_839_11485074_116_36133_069 Sorgh... 92 8e-017
gb|CW357225.1|CW357225 fsbb001f023l24f0 Sorghum methylation... 92 8e-017
gb|CW386170.1|CW386170 fsbb001f069o24k0 Sorghum methylation... 92 8e-017
gb|CW433627.1|CW433627 fsbb001f148o21f0 Sorghum methylation... 92 8e-017
gb|CW445423.1|CW445423 fsbb001f170j05f0 Sorghum methylation... 92 8e-017
gb|CW790793.1|CW790793 SP__Ba0073G05.f SP__Ba Sorghum propi... 92 8e-017
gb|BE358521.1|BE358521 DG1_31_F08.b1_A002 Dark Grown 1 (DG1... 92 8e-017
gb|BG050215.1|BG050215 FM1_68_B02.b1_A003 Floral-Induced Me... 92 8e-017
gb|BG103984.1|BG103984 RHIZ2_39_B06.b1_A003 Rhizome2 (RHIZ2... 92 8e-017
gb|BG240541.1|BG240541 OV1_31_C03.b1_A002 Ovary 1 (OV1) Sor... 92 8e-017
gb|BM323974.1|BM323974 PIC1_29_H01.b1_A002 Pathogen-infecte... 92 8e-017
gb|BM324034.1|BM324034 PIC1_30_E07.b1_A002 Pathogen-infecte... 92 8e-017
gb|CD205367.1|CD205367 HS1_13_C05.g1_A012 Heat-shocked seed... 92 8e-017
gb|CD206616.1|CD206616 HS1_23_B12.g1_A012 Heat-shocked seed... 92 8e-017
gb|CD223722.1|CD223722 CCC1_29_D12.g1_A007 Callus culture/c... 92 8e-017
gb|CD424541.1|CD424541 SA1_6_C04.g1_A002 Salicylic acid-tre... 92 8e-017
gb|CF486109.1|CF486109 POL1_35_F06.g1_A002 Pollen Sorghum b... 92 8e-017
gb|CF769556.1|CF769556 DSBF1_2_H05.b1_A010 Drought-stressed... 92 8e-017
gb|CX620599.1|CX620599 GABR1_52_G09.g1_A002 GA- or brassino... 92 8e-017
gb|CW447577.1|CW447577 fsbb001f180m06f0 Sorghum methylation... 90 3e-016
gb|AW563619.1|AW563619 LG1_241_H04.b1_A002 Light Grown 1 (L... 90 3e-016
gb|BF585801.1|BF585801 FM1_24_F12.b1_A003 Floral-Induced Me... 90 3e-016
gb|CF430132.1|CF430132 PH1_26_A09.g1_A002 Phosphorous-defic... 90 3e-016
gb|CF432045.1|CF432045 NIT1_16_H12.g1_A002 Nitrogen-deficie... 90 3e-016
gb|CW154020.1|CW154020 104_556_11145363_148_36348_016 Sorgh... 88 1e-015
gb|BM323922.1|BM323922 PIC1_29_C03.b1_A002 Pathogen-infecte... 88 1e-015
gb|CW164132.1|CW164132 104_572_11151825_148_36466_047 Sorgh... 86 5e-015
gb|CW181208.1|CW181208 104_596_11163376_148_36649_062 Sorgh... 86 5e-015
gb|CW444773.1|CW444773 fsbb001f166i18k0 Sorghum methylation... 86 5e-015
gb|CL185824.1|CL185824 104_400_10899804_114_32416_044 Sorgh... 84 2e-014
gb|CL185825.1|CL185825 104_400_10899804_116_32403_044 Sorgh... 84 2e-014
gb|CW039510.1|CW039510 104_272_10505542_115_30390 Sorghum m... 84 2e-014
gb|CW134985.1|CW134985 104_519_11117600_116_34831_026 Sorgh... 84 2e-014
gb|CW134986.1|CW134986 104_519_11117600_148_34827_026 Sorgh... 84 2e-014
gb|CW198271.1|CW198271 104_622_11182119_148_36830_050 Sorgh... 84 2e-014
gb|CW219615.1|CW219615 104_653_11196884_148_37139_066 Sorgh... 84 2e-014
gb|CW297712.1|CW297712 104_780_11462187_148_35652_016 Sorgh... 84 2e-014
gb|CW336296.1|CW336296 104_835_11483512_116_36097_056 Sorgh... 84 2e-014
gb|CW386169.1|CW386169 fsbb001f069o24f0 Sorghum methylation... 84 2e-014
gb|CW422633.1|CW422633 fsbb001f132a11f0 Sorghum methylation... 84 2e-014
gb|CW498382.1|CW498382 fsbb001f291j09k0 Sorghum methylation... 84 2e-014
gb|AW286068.2|AW286068 LG1_261_A05.b1_A002 Light Grown 1 (L... 84 2e-014
gb|AW286088.2|AW286088 LG1_261_C05.b1_A002 Light Grown 1 (L... 84 2e-014
gb|AW744971.1|AW744971 LG1_385_H01.b1_A002 Light Grown 1 (L... 84 2e-014
gb|BE599177.1|BE599177 PI1_86_C12.b1_A002 Pathogen induced ... 84 2e-014
gb|BE918209.1|BE918209 OV1_3_C05.b1_A002 Ovary 1 (OV1) Sorg... 84 2e-014
gb|BE918232.1|BE918232 OV1_3_G01.b1_A002 Ovary 1 (OV1) Sorg... 84 2e-014
gb|BF657006.1|BF657006 OV2_19_H08.b1_A002 Ovary 2 (OV2) Sor... 84 2e-014
gb|BG052167.1|BG052167 RHIZ2_7_A05.b1_A003 Rhizome2 (RHIZ2)... 84 2e-014
gb|BG947460.1|BG947460 IP1_4_F11.b1_A002 Immature pannicle ... 84 2e-014
gb|BM323415.1|BM323415 PIC1_19_A04.b1_A002 Pathogen-infecte... 84 2e-014
gb|BM324545.1|BM324545 PIC1_32_E10.b1_A002 Pathogen-infecte... 84 2e-014
gb|CD204214.1|CD204214 HS1_4_G10.g1_A012 Heat-shocked seedl... 84 2e-014
gb|CD213311.1|CD213311 HS1_29_D07.g1_A012 Heat-shocked seed... 84 2e-014
gb|CD221270.1|CD221270 CCC1_74_H09.g1_A007 Callus culture/c... 84 2e-014
gb|CD221729.1|CD221729 CCC1_70_D02.g1_A007 Callus culture/c... 84 2e-014
gb|CD428443.1|CD428443 ETH1_31_B02.g1_A002 Ethylene-treated... 84 2e-014
gb|CD463002.1|CD463002 ETH1_41_A02.g1_A002 Ethylene-treated... 84 2e-014
gb|CF481091.1|CF481091 POL1_69_H08.g1_A002 Pollen Sorghum b... 84 2e-014
gb|CF482973.1|CF482973 POL1_10_A03.g1_A002 Pollen Sorghum b... 84 2e-014
gb|CF483655.1|CF483655 POL1_23_G03.g1_A002 Pollen Sorghum b... 84 2e-014
gb|CN128499.1|CN128499 RHOH1_29_H12.g1_A002 Acid- and alkal... 84 2e-014
gb|CN131043.1|CN131043 RHOH1_45_B02.g1_A002 Acid- and alkal... 84 2e-014
gb|CL197482.1|CL197482 104_424_10943770_114_32383_039 Sorgh... 82 8e-014
gb|CW082498.1|CW082498 104_424_10943770_114_32334_039 Sorgh... 82 8e-014
gb|CW144594.1|CW144594 104_536_11138025_116_34964_033 Sorgh... 82 8e-014
gb|CW334596.1|CW334596 104_833_11482584_148_36072_094 Sorgh... 82 8e-014
gb|BE356283.1|BE356283 DG1_124_H01.b1_A002 Dark Grown 1 (DG... 82 8e-014
gb|CD428666.1|CD428666 ETH1_33_H06.g1_A002 Ethylene-treated... 82 8e-014
gb|CD430442.1|CD430442 ETH1_18_D05.g1_A002 Ethylene-treated... 82 8e-014
gb|CF483479.1|CF483479 POL1_22_C06.g1_A002 Pollen Sorghum b... 82 8e-014
gb|CW130781.1|CW130781 104_513_11115307_116_34782_074 Sorgh... 80 3e-013
gb|CW243066.1|CW243066 104_703_11219701_148_37572_063 Sorgh... 78 1e-012
gb|CW376443.1|CW376443 fsbb001f054f07k0 Sorghum methylation... 78 1e-012
gb|CW416018.1|CW416018 fsbb001f116g04f0 Sorghum methylation... 78 1e-012
gb|CW416019.1|CW416019 fsbb001f116g04k0 Sorghum methylation... 78 1e-012
gb|BM322762.1|BM322762 PIC1_9_G07.b1_A002 Pathogen-infected... 78 1e-012
gb|CF484340.1|CF484340 POL1_4_E08.g1_A002 Pollen Sorghum bi... 78 1e-012
gb|CL189521.1|CL189521 104_406_10902354_116_32472_065 Sorgh... 76 5e-012
gb|CW076195.1|CW076195 104_366_10810979_116_31807_275 Sorgh... 76 5e-012
gb|CW234070.1|CW234070 104_687_11213783_148_37378_086 Sorgh... 76 5e-012
gb|CW453224.1|CW453224 fsbb001f197c06k0 Sorghum methylation... 76 5e-012
gb|BG102287.1|BG102287 RHIZ2_24_D10.b1_A003 Rhizome2 (RHIZ2... 76 5e-012
gb|BG103922.1|BG103922 RHIZ2_38_C06.b1_A003 Rhizome2 (RHIZ2... 76 5e-012
gb|BG356150.1|BG356150 EM1_22_B02.b1_A002 Embryo 1 (EM1) So... 76 5e-012
gb|BG356183.1|BG356183 EM1_22_E03.b1_A002 Embryo 1 (EM1) So... 76 5e-012
gb|CB925508.1|CB925508 ABA1_33_A04.g1_A012 Abscisic acid-tr... 76 5e-012
gb|CD221452.1|CD221452 CCC1_54_H09.g1_A007 Callus culture/c... 76 5e-012
gb|CF074469.1|CF074469 FE1_24_B09.g1_A002 Iron-deficient se... 76 5e-012
gb|CF427260.1|CF427260 PH1_4_A10.g1_A002 Phosphorous-defici... 76 5e-012
gb|CN129168.1|CN129168 RHOH1_33_H07.g1_A002 Acid- and alkal... 76 5e-012
gb|CN139030.1|CN139030 OX1_15_C08.g1_A002 Oxidatively-stres... 76 5e-012
gb|CN140751.1|CN140751 OX1_46_F05.g1_A002 Oxidatively-stres... 76 5e-012
gb|CN141894.1|CN141894 WOUND1_2_C01.g1_A002 Wounded leaves ... 76 5e-012
gb|CW102182.1|CW102182 104_470_11011201_116_34416_009 Sorgh... 74 2e-011
gb|CW334595.1|CW334595 104_833_11482584_116_36073_094 Sorgh... 74 2e-011
gb|CW346403.1|CW346403 104_849_11489006_116_36216_049 Sorgh... 74 2e-011
gb|CW346404.1|CW346404 104_849_11489006_148_36215_049 Sorgh... 74 2e-011
gb|CL150097.1|CL150097 104_331_10778279_116_31356_215 Sorgh... 72 8e-011
gb|CW203597.1|CW203597 104_631_11186102_116_37095_059 Sorgh... 72 8e-011
gb|CW317716.1|CW317716 104_809_11473561_148_35865_005 Sorgh... 72 8e-011
gb|CW473340.1|CW473340 fsbb001f228k19f0 Sorghum methylation... 72 8e-011
gb|CW473341.1|CW473341 fsbb001f228k19k0 Sorghum methylation... 72 8e-011
gb|CW474190.1|CW474190 fsbb001f229o14k0 Sorghum methylation... 72 8e-011
gb|BF177210.1|BF177210 EM1_1_F11.b1_A002 Embryo 1 (EM1) Sor... 72 8e-011
gb|BF177211.1|BF177211 EM1_1_F12.b1_A002 Embryo 1 (EM1) Sor... 72 8e-011
gb|BF587094.1|BF587094 FM1_32_B05.b1_A003 Floral-Induced Me... 72 8e-011
gb|CB924853.1|CB924853 ABA1_28_H06.g1_A012 Abscisic acid-tr... 72 8e-011
gb|CB929025.1|CB929025 ABA1_38_F10.g1_A012 Abscisic acid-tr... 72 8e-011
gb|CL150096.1|CL150096 104_331_10778279_114_31355_215 Sorgh... 70 3e-010
gb|CW155324.1|CW155324 104_557_11146078_148_36361_083 Sorgh... 70 3e-010
gb|CW241054.1|CW241054 104_700_11218555_148_37542_080 Sorgh... 70 3e-010
gb|CW290493.1|CW290493 104_769_11413039_116_35555_020 Sorgh... 70 3e-010
gb|CW297711.1|CW297711 104_780_11462187_116_35648_016 Sorgh... 70 3e-010
gb|CW430196.1|CW430196 fsbb001f143m16k0 Sorghum methylation... 70 3e-010
gb|AW564059.1|AW564059 LG1_281_C04.b1_A002 Light Grown 1 (L... 70 3e-010
gb|BE594549.1|BE594549 PI1_34_F02.b1_A002 Pathogen induced ... 70 3e-010
gb|BG556781.1|BG556781 EM1_38_E06.b1_A002 Embryo 1 (EM1) So... 70 3e-010
gb|CX613343.1|CX613343 GABR1_7_D07.g1_A002 GA- or brassinol... 70 3e-010
gb|CL153312.1|CL153312 104_337_10780626_114_31367_258 Sorgh... 68 1e-009
gb|CL183241.1|CL183241 104_395_10898044_116_31918_268 Sorgh... 68 1e-009
gb|CW138154.1|CW138154 104_525_11120053_116_34878_051 Sorgh... 68 1e-009
gb|CW194021.1|CW194021 104_617_11179876_116_36786_014 Sorgh... 68 1e-009
gb|CW194022.1|CW194022 104_617_11179876_148_36790_014 Sorgh... 68 1e-009
gb|CW221926.1|CW221926 104_657_11202107_148_37174_044 Sorgh... 68 1e-009
gb|CW224442.1|CW224442 104_660_11203448_116_37444_020 Sorgh... 68 1e-009
gb|CW224443.1|CW224443 104_660_11203448_148_37445_020 Sorgh... 68 1e-009
gb|CW248704.1|CW248704 104_710_11222444_116_35040_078 Sorgh... 68 1e-009
gb|CW248705.1|CW248705 104_710_11222444_148_35036_078 Sorgh... 68 1e-009
gb|CW410670.1|CW410670 fsbb001f105i11k0 Sorghum methylation... 68 1e-009
gb|BE600856.1|BE600856 PI1_92_B01.b1_A002 Pathogen induced ... 68 1e-009
gb|BG158319.1|BG158319 EM1_12_E03.b1_A002 Embryo 1 (EM1) So... 68 1e-009
gb|BG322625.1|BG322625 EM1_41_C02.b1_A002 Embryo 1 (EM1) So... 68 1e-009
gb|CD225975.1|CD225975 CCC1_42_H04.g1_A007 Callus culture/c... 68 1e-009
gb|CD226246.1|CD226246 CCC1_44_H05.g1_A007 Callus culture/c... 68 1e-009
gb|CD228751.1|CD228751 CCC1_9_C07.g1_A007 Callus culture/ce... 68 1e-009
gb|CD234874.1|CD234874 SS1_18_G06.g1_A012 Salt-stressed see... 68 1e-009
gb|CW040139.1|CW040139 104_273_10505919_116_30279 Sorghum m... 66 5e-009
gb|CW109194.1|CW109194 104_481_11097953_148_34501_075 Sorgh... 66 5e-009
gb|CW371617.1|CW371617 fsbb001f047c17f0 Sorghum methylation... 66 5e-009
gb|CX610784.1|CX610784 ANR1_20_G01.g1_A002 Anaerobic roots ... 66 5e-009
gb|CW113486.1|CW113486 104_487_11105469_148_34551_083 Sorgh... 64 2e-008
gb|BF421373.1|BF421373 FM1_7_H08.b1_A003 Floral-Induced Mer... 64 2e-008
gb|CF770723.1|CF770723 DSBF1_9_H08.b1_A010 Drought-stressed... 64 2e-008
gb|CC058833.1|CC058833 ii15h04.b1 WGS-SbicolorF (DH5a methy... 62 7e-008
gb|CL175928.1|CL175928 104_382_10892788_148_31762_004 Sorgh... 62 7e-008
gb|CW203598.1|CW203598 104_631_11186102_148_37094_059 Sorgh... 62 7e-008
gb|CW276542.1|CW276542 104_750_11405547_116_35396_012 Sorgh... 62 7e-008
gb|CW437658.1|CW437658 fsbb001f154o03f0 Sorghum methylation... 62 7e-008
gb|CL705694.2|CL705694 SP__Bb0046J01.f SP__Bb Sorghum propi... 62 7e-008
gb|BE594739.1|BE594739 PI1_36_H10.b1_A002 Pathogen induced ... 62 7e-008
gb|BF588280.1|BF588280 FM1_39_G12.b1_A003 Floral-Induced Me... 62 7e-008
gb|BM326292.1|BM326292 PIC1_55_B10.b1_A002 Pathogen-infecte... 62 7e-008
gb|CX612118.1|CX612118 ANR1_28_D01.g1_A002 Anaerobic roots ... 62 7e-008
gb|CL160911.1|CL160911 104_352_10805336_116_31827_008 Sorgh... 60 3e-007
gb|CL164912.1|CL164912 104_359_10808233_116_31817_217 Sorgh... 60 3e-007
gb|CL180414.1|CL180414 104_390_10895996_148_31929_140 Sorgh... 60 3e-007
gb|CW099612.1|CW099612 104_466_11003646_148_34379_021 Sorgh... 60 3e-007
gb|CW181453.1|CW181453 104_596_11163519_116_36647_056 Sorgh... 60 3e-007
gb|CW181454.1|CW181454 104_596_11163519_148_36648_056 Sorgh... 60 3e-007
gb|CW236761.1|CW236761 104_692_11215789_148_37496_049 Sorgh... 60 3e-007
gb|CW246188.1|CW246188 104_707_11221238_148_37607_063 Sorgh... 60 3e-007
gb|CW294608.1|CW294608 104_775_11415277_148_35608_053 Sorgh... 60 3e-007
gb|CW296172.1|CW296172 104_777_11461349_148_35624_017 Sorgh... 60 3e-007
gb|CW346721.1|CW346721 fsbb001f006f16f0 Sorghum methylation... 60 3e-007
gb|BG050307.1|BG050307 FM1_53_C11.b1_A003 Floral-Induced Me... 60 3e-007
gb|BG051224.1|BG051224 FM1_57_G07.b1_A003 Floral-Induced Me... 60 3e-007
gb|BG103464.1|BG103464 RHIZ2_20_H08.b1_A003 Rhizome2 (RHIZ2... 60 3e-007
gb|BG465883.1|BG465883 RHIZ2_45_G04.g1_A003 Rhizome2 (RHIZ2... 60 3e-007
gb|BI075976.1|BI075976 IP1_23_G05.b1_A002 Immature pannicle... 60 3e-007
gb|BI140774.1|BI140774 IP1_38_F05.b1_A002 Immature pannicle... 60 3e-007
gb|CF486121.1|CF486121 POL1_35_G10.g1_A002 Pollen Sorghum b... 60 3e-007
gb|CN126543.1|CN126543 RHOH1_17_F12.g1_A002 Acid- and alkal... 60 3e-007
gb|CN134785.1|CN134785 OX1_28_B01.g1_A002 Oxidatively-stres... 60 3e-007
gb|AF527809.1| Sorghum bicolor clone BAC SB_BBc0234M12 php2... 60 3e-007
gb|AC169376.1| Sorghum bicolor clone SB_BBc0046M17, WORKING... 60 3e-007
gb|CW098081.1|CW098081 104_464_11002812_148_34365_040 Sorgh... 58 1e-006
gb|CW105676.1|CW105676 104_475_11013002_116_34457_015 Sorgh... 58 1e-006
gb|CW251114.1|CW251114 104_713_11223755_116_35062_038 Sorgh... 58 1e-006
gb|BG463240.1|BG463240 EM1_48_B09.b1_A002 Embryo 1 (EM1) So... 58 1e-006
gb|CN140487.1|CN140487 OX1_36_C06.g1_A002 Oxidatively-stres... 58 1e-006
gb|CX607638.1|CX607638 ANR1_29_H05.g1_A002 Anaerobic roots ... 58 1e-006
gb|AC169378.1| Sorghum bicolor clone SB_BBc0007L02, WORKING... 58 1e-006
gb|CD235566.1|CD235566 SS1_36_B03.g1_A012 Salt-stressed see... 56 5e-006
gb|BZ628310.1|BZ628310 ih59c06.b1 WGS-SbicolorF (DH5a methy... 54 2e-005
gb|CL149140.1|CL149140 104_329_10593575_148_31784_315 Sorgh... 54 2e-005
gb|CL187252.1|CL187252 104_402_10900749_114_32432_085 Sorgh... 54 2e-005
gb|CL187253.1|CL187253 104_402_10900749_116_32436_085 Sorgh... 54 2e-005
gb|CW024121.1|CW024121 104_164_10434769_1_30002 Sorghum met... 54 2e-005
gb|CW193065.1|CW193065 104_615_11179363_116_36769_068 Sorgh... 54 2e-005
gb|CW193066.1|CW193066 104_615_11179363_148_36770_068 Sorgh... 54 2e-005
gb|CW277622.1|CW277622 104_751_11406127_116_35411_020 Sorgh... 54 2e-005
gb|CW277623.1|CW277623 104_751_11406127_148_35415_020 Sorgh... 54 2e-005
gb|CW324374.1|CW324374 104_818_11477130_148_35909_065 Sorgh... 54 2e-005
gb|CW383167.1|CW383167 fsbb001f065i12f0 Sorghum methylation... 54 2e-005
gb|CW387615.1|CW387615 fsbb001f072a15f0 Sorghum methylation... 54 2e-005
gb|BE356842.1|BE356842 DG1_145_E04.b1_A002 Dark Grown 1 (DG... 54 2e-005
gb|BE357139.1|BE357139 DG1_147_C09.b1_A002 Dark Grown 1 (DG... 54 2e-005
gb|BF481048.1|BF481048 FM1_15_F11.b1_A003 Floral-Induced Me... 54 2e-005
gb|BG050842.1|BG050842 FM1_71_E07.b1_A003 Floral-Induced Me... 54 2e-005
gb|BG463444.1|BG463444 EM1_49_F01.b1_A002 Embryo 1 (EM1) So... 54 2e-005
gb|BI098807.1|BI098807 IP1_33_E02.b1_A002 Immature pannicle... 54 2e-005
gb|BM318587.1|BM318587 PI1_15_C11.b9_A002 Pathogen induced ... 54 2e-005
gb|CD204912.1|CD204912 HS1_10_E06.g1_A012 Heat-shocked seed... 54 2e-005
gb|CD209210.1|CD209210 HS1_46_A12.g1_A012 Heat-shocked seed... 54 2e-005
gb|CD228442.1|CD228442 CCC1_7_F05.g1_A007 Callus culture/ce... 54 2e-005
gb|CD229720.1|CD229720 CCC1_18_E04.g1_A007 Callus culture/c... 54 2e-005
gb|CD427093.1|CD427093 SA1_17_G05.g1_A002 Salicylic acid-tr... 54 2e-005
gb|CD427320.1|CD427320 SA1_18_B02.g1_A002 Salicylic acid-tr... 54 2e-005
gb|CF432051.1|CF432051 NIT1_16_D12.g1_A002 Nitrogen-deficie... 54 2e-005
gb|CF485913.1|CF485913 POL1_34_B08.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF487246.1|CF487246 POL1_42_D07.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CN132538.1|CN132538 OX1_6_F10.g1_A002 Oxidatively-stress... 54 2e-005
gb|CN150796.1|CN150796 WOUND1_71_B10.g1_A002 Wounded leaves... 54 2e-005
gb|BZ629802.1|BZ629802 ih68e06.g1 WGS-SbicolorF (DH5a methy... 52 7e-005
gb|CL174903.1|CL174903 104_379_10891993_116_31769_361 Sorgh... 52 7e-005
gb|CL181401.1|CL181401 104_392_10896731_116_31926_107 Sorgh... 52 7e-005
gb|CL186270.1|CL186270 104_401_10900096_114_32407_064 Sorgh... 52 7e-005
gb|CL190444.1|CL190444 104_408_10906084_114_32484_006 Sorgh... 52 7e-005
gb|CL190445.1|CL190445 104_408_10906084_116_32502_006 Sorgh... 52 7e-005
gb|CW122164.1|CW122164 104_500_11110482_116_34666_065 Sorgh... 52 7e-005
gb|CW173156.1|CW173156 104_584_11156691_148_36542_004 Sorgh... 52 7e-005
gb|CW246186.1|CW246186 104_707_11221238_116_35085_063 Sorgh... 52 7e-005
gb|CW296171.1|CW296171 104_777_11461349_116_35620_017 Sorgh... 52 7e-005
gb|CW303307.1|CW303307 104_787_11465171_116_35676_036 Sorgh... 52 7e-005
gb|CW342284.1|CW342284 104_844_11486791_116_36173_030 Sorgh... 52 7e-005
gb|CW342285.1|CW342285 104_844_11486791_148_36174_030 Sorgh... 52 7e-005
gb|CW401660.1|CW401660 fsbb001f092j04k0 Sorghum methylation... 52 7e-005
gb|CW419920.1|CW419920 fsbb001f126a02f0 Sorghum methylation... 52 7e-005
gb|CW454179.1|CW454179 fsbb001f198i04f0 Sorghum methylation... 52 7e-005
gb|BF421996.1|BF421996 FM1_11_F05.b1_A003 Floral-Induced Me... 52 7e-005
gb|BF586194.1|BF586194 FM1_26_H08.b1_A003 Floral-Induced Me... 52 7e-005
gb|BG158379.1|BG158379 FM1_59_F07.b1_A003 Floral-Induced Me... 52 7e-005
gb|BI211793.1|BI211793 IP1_61_B06.b1_A002 Immature pannicle... 52 7e-005
gb|BM330688.1|BM330688 PIC1_55_B10.g1_A002 Pathogen-infecte... 52 7e-005
gb|CD212342.1|CD212342 HS1_30_A02.g1_A012 Heat-shocked seed... 52 7e-005
gb|CD212497.1|CD212497 HS1_5_C11.g1_A012 Heat-shocked seedl... 52 7e-005
gb|CD226721.1|CD226721 CCC1_47_F11.g1_A007 Callus culture/c... 52 7e-005
gb|CF487877.1|CF487877 POL1_46_A08.g1_A002 Pollen Sorghum b... 52 7e-005
gb|CN125223.1|CN125223 RHOH1_9_F11.g1_A002 Acid- and alkali... 52 7e-005
gb|CX612156.1|CX612156 ANR1_28_G04.g1_A002 Anaerobic roots ... 52 7e-005
gb|CW220717.1|CW220717 104_655_11197505_148_37154_071 Sorgh... 50 3e-004
gb|CW232536.1|CW232536 104_685_11212871_148_37487_092 Sorgh... 50 3e-004
gb|CW264460.1|CW264460 104_733_11231308_116_35256_012 Sorgh... 50 3e-004
gb|CW264461.1|CW264461 104_733_11231308_148_35252_012 Sorgh... 50 3e-004
gb|CW299662.1|CW299662 104_782_11463237_116_35767_083 Sorgh... 50 3e-004
gb|CW346899.1|CW346899 fsbb001f006j11f0 Sorghum methylation... 50 3e-004
gb|CW346900.1|CW346900 fsbb001f006j11k0 Sorghum methylation... 50 3e-004
gb|CW350824.1|CW350824 fsbb001f012f05f0 Sorghum methylation... 50 3e-004
gb|CW350825.1|CW350825 fsbb001f012f05k0 Sorghum methylation... 50 3e-004
gb|CW371113.1|CW371113 fsbb001f046g16f0 Sorghum methylation... 50 3e-004
gb|AW564012.1|AW564012 LG1_281_G11.b1_A002 Light Grown 1 (L... 50 3e-004
gb|BE594587.1|BE594587 PI1_35_A09.b1_A002 Pathogen induced ... 50 3e-004
gb|BG157979.1|BG157979 OV1_15_E03.b1_A002 Ovary 1 (OV1) Sor... 50 3e-004
gb|BG159564.1|BG159564 OV2_6_B02.b1_A002 Ovary 2 (OV2) Sorg... 50 3e-004
gb|BG412875.1|BG412875 OV2_36_A04.b1_A002 Ovary 2 (OV2) Sor... 50 3e-004
gb|BG560487.1|BG560487 RHIZ2_75_A04.b1_A003 Rhizome2 (RHIZ2... 50 3e-004
gb|BI351383.1|BI351383 IP1_70_H05.b1_A002 Immature pannicle... 50 3e-004
gb|BM324186.1|BM324186 PIC1_25_D05.b1_A002 Pathogen-infecte... 50 3e-004
gb|CB924747.1|CB924747 ABA1_1_B06.g1_A012 Abscisic acid-tre... 50 3e-004
gb|CD212841.1|CD212841 HS1_16_B08.g1_A012 Heat-shocked seed... 50 3e-004
gb|CD222848.1|CD222848 CCC1_24_A09.g1_A007 Callus culture/c... 50 3e-004
gb|CD234290.1|CD234290 SS1_26_C05.g1_A012 Salt-stressed see... 50 3e-004
gb|CD236516.1|CD236516 SS1_34_H09.g1_A012 Salt-stressed see... 50 3e-004
gb|CN133041.1|CN133041 OX1_9_F10.g1_A002 Oxidatively-stress... 50 3e-004
gb|CN136711.1|CN136711 OX1_44_H02.g1_A002 Oxidatively-stres... 50 3e-004
gb|CX612028.1|CX612028 ANR1_28_D01.b1_A002 Anaerobic roots ... 50 3e-004
gb|CL184662.1|CL184662 104_398_10899003_114_32368_014 Sorgh... 48 0.001
gb|BE125920.1|BE125920 DG1_59_F06.b1_A002 Dark Grown 1 (DG1... 48 0.001
gb|BE594556.1|BE594556 PI1_34_F09.b1_A002 Pathogen induced ... 48 0.001
gb|CD229872.1|CD229872 CCC1_20_A05.g1_A007 Callus culture/c... 48 0.001
gb|CF758232.1|CF758232 DSAF1_29_B09.g1_A011 Drought-stresse... 48 0.001
gb|CF758970.1|CF758970 DSAF1_38_F12.g1_A011 Drought-stresse... 48 0.001
gb|CF760989.1|CF760989 DSAF1_69_F02.b1_A011 Drought-stresse... 48 0.001
gb|CN125567.1|CN125567 RHOH1_11_H01.g1_A002 Acid- and alkal... 48 0.001
gb|CN129158.1|CN129158 RHOH1_33_G09.g1_A002 Acid- and alkal... 48 0.001
gb|CN144910.1|CN144910 WOUND1_25_D12.g1_A002 Wounded leaves... 48 0.001
gb|CL154726.1|CL154726 104_340_10781611_114_31469_091 Sorgh... 46 0.004
gb|CL197262.1|CL197262 104_424_10943629_116_32337_061 Sorgh... 46 0.004
gb|CW131983.1|CW131983 104_515_11115967_148_34794_030 Sorgh... 46 0.004
gb|CW369652.1|CW369652 fsbb001f044c16f0 Sorghum methylation... 46 0.004
gb|CW369653.1|CW369653 fsbb001f044c16k0 Sorghum methylation... 46 0.004
gb|CW411651.1|CW411651 fsbb001f106o19f0 Sorghum methylation... 46 0.004
gb|CW413602.1|CW413602 fsbb001f112n08f0 Sorghum methylation... 46 0.004
gb|BE365849.1|BE365849 PI1_2_E12.b1_A002 Pathogen induced 1... 46 0.004
gb|BG357338.1|BG357338 OV2_12_F06.b1_A002 Ovary 2 (OV2) Sor... 46 0.004
gb|CF759670.1|CF759670 DSAF1_48_C06.b1_A011 Drought-stresse... 46 0.004
gb|CN126834.1|CN126834 RHOH1_19_A09.g1_A002 Acid- and alkal... 46 0.004
gb|CN140658.1|CN140658 OX1_45_F12.g1_A002 Oxidatively-stres... 46 0.004
gb|CX622909.1|CX622909 GABR1_66_D11.g1_A002 GA- or brassino... 46 0.004
gb|CL194078.1|CL194078 104_418_10941370_114_32284_043 Sorgh... 44 0.017
gb|CL194079.1|CL194079 104_418_10941370_116_32288_043 Sorgh... 44 0.017
gb|CW178558.1|CW178558 104_592_11159627_148_36618_042 Sorgh... 44 0.017
gb|CW193132.1|CW193132 104_615_11179402_116_36772_033 Sorgh... 44 0.017
gb|CW204487.1|CW204487 104_632_11186569_116_37060_007 Sorgh... 44 0.017
gb|CW204488.1|CW204488 104_632_11186569_148_36922_007 Sorgh... 44 0.017
gb|CW243907.1|CW243907 104_704_11220305_116_37577_069 Sorgh... 44 0.017
gb|CW243908.1|CW243908 104_704_11220305_148_37578_069 Sorgh... 44 0.017
gb|CW267809.1|CW267809 104_738_11400937_148_35299_011 Sorgh... 44 0.017
gb|CW276884.1|CW276884 104_750_11405729_116_35394_067 Sorgh... 44 0.017
gb|CW282236.1|CW282236 104_758_11408606_148_35470_059 Sorgh... 44 0.017
gb|CW286690.1|CW286690 104_764_11411018_116_35516_007 Sorgh... 44 0.017
gb|CW286691.1|CW286691 104_764_11411018_148_35520_007 Sorgh... 44 0.017
gb|CW332122.1|CW332122 104_829_11481258_116_36033_069 Sorgh... 44 0.017
gb|CW332123.1|CW332123 104_829_11481258_148_36034_069 Sorgh... 44 0.017
gb|CW473172.1|CW473172 fsbb001f228h02k0 Sorghum methylation... 44 0.017
gb|AW746637.1|AW746637 WS1_54_B01.b1_A002 Water-stressed 1 ... 44 0.017
gb|BE358062.1|BE358062 DG1_24_E05.b1_A002 Dark Grown 1 (DG1... 44 0.017
gb|BE358832.1|BE358832 DG1_32_A02.b1_A002 Dark Grown 1 (DG1... 44 0.017
gb|BG101705.1|BG101705 EM1_5_C05.b1_A002 Embryo 1 (EM1) Sor... 44 0.017
gb|BG560629.1|BG560629 RHIZ2_59_G06.b1_A003 Rhizome2 (RHIZ2... 44 0.017
gb|BG817418.1|BG817418 EM1_75_G01.b1_A002 Embryo 1 (EM1) So... 44 0.017
gb|BI141627.1|BI141627 IP1_54_H07.b1_A002 Immature pannicle... 44 0.017
gb|CD211920.1|CD211920 HS1_67_D02.g1_A012 Heat-shocked seed... 44 0.017
gb|CD213663.1|CD213663 HS1_52_E07.g1_A012 Heat-shocked seed... 44 0.017
gb|CD427607.1|CD427607 SA1_37_G02.g1_A002 Salicylic acid-tr... 44 0.017
gb|CF071440.1|CF071440 FE1_13_B01.g1_A002 Iron-deficient se... 44 0.017
gb|CF481245.1|CF481245 POL1_70_G06.g1_A002 Pollen Sorghum b... 44 0.017
gb|CF487221.1|CF487221 POL1_42_B05.g1_A002 Pollen Sorghum b... 44 0.017
gb|CW027768.1|CW027768 104_254_10498697_116_30396 Sorghum m... 42 0.069
gb|CW267014.1|CW267014 104_737_11400460_148_35296_016 Sorgh... 42 0.069
gb|CW363868.1|CW363868 fsbb001f035k18f0 Sorghum methylation... 42 0.069
gb|CW363869.1|CW363869 fsbb001f035k18k0 Sorghum methylation... 42 0.069
gb|CW483530.1|CW483530 fsbb001f245d15k0 Sorghum methylation... 42 0.069
gb|BG557354.1|BG557354 EM1_42_H10.b1_A002 Embryo 1 (EM1) So... 42 0.069
gb|CX609573.1|CX609573 ANR1_13_B06.g1_A002 Anaerobic roots ... 42 0.069
gb|CL152825.1|CL152825 104_336_10780264_114_31365_280 Sorgh... 40 0.27
gb|CW318893.1|CW318893 104_811_11474196_148_35885_044 Sorgh... 40 0.27
gb|CW333490.1|CW333490 104_831_11481974_116_36045_055 Sorgh... 40 0.27
gb|CW333491.1|CW333491 104_831_11481974_148_36046_055 Sorgh... 40 0.27
gb|CW499503.1|CW499503 fsbb001f294f01f0 Sorghum methylation... 40 0.27
gb|BE363021.1|BE363021 DG1_9_A06.b1_A002 Dark Grown 1 (DG1)... 40 0.27
gb|BE918637.1|BE918637 OV1_4_D01.b1_A002 Ovary 1 (OV1) Sorg... 40 0.27
gb|CD228424.1|CD228424 CCC1_7_E06.g1_A007 Callus culture/ce... 40 0.27
gb|CX606760.1|CX606760 ANR1_4_G05.g1_A002 Anaerobic roots S... 40 0.27
gb|CX616368.1|CX616368 GABR1_27_B07.g1_A002 GA- or brassino... 40 0.27
gb|CX621198.1|CX621198 GABR1_56_D08.g1_A002 GA- or brassino... 40 0.27
>gb|CW266827.1|CW266827 104_736_11232643_116_35281_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232643, DNA
sequence
Length = 652
Score = 117 bits (59), Expect = 1e-024
Identities = 82/87 (94%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccc-tcccgcctctcgccagtcgcttcgcgccctcgcctccggt 112
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||
Sbjct: 227 cggcgtcagcggcttccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gt 285
Query: 113 cctccgcacactggccggtgaccctgc 139
||||||||||| |||||| ||||||||
Sbjct: 286 cctccgcacaccggccggcgaccctgc 312
>gb|CD431595.1|CD431595 ETH1_9_C02.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_9_C02_A002 5', mRNA sequence
Length = 630
Score = 117 bits (59), Expect = 1e-024
Identities = 82/87 (94%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccc-tcccgcctctcgccagtcgcttcgcgccctcgcctccggt 112
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||
Sbjct: 88 cggcgtcagcggcttccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gt 146
Query: 113 cctccgcacactggccggtgaccctgc 139
||||||||||| |||||| ||||||||
Sbjct: 147 cctccgcacaccggccggcgaccctgc 173
>gb|CX607263.1|CX607263 ANR1_7_C10.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_7_C10_A002 5', mRNA sequence
Length = 826
Score = 117 bits (59), Expect = 1e-024
Identities = 82/87 (94%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccc-tcccgcctctcgccagtcgcttcgcgccctcgcctccggt 112
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||
Sbjct: 54 cggcgtcagcggcttccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gt 112
Query: 113 cctccgcacactggccggtgaccctgc 139
||||||||||| |||||| ||||||||
Sbjct: 113 cctccgcacaccggccggcgaccctgc 139
>gb|BG158894.1|BG158894 RHIZ2_42_A04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 272
Score = 111 bits (56), Expect = 9e-023
Identities = 81/88 (92%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 121 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 179
Query: 114 ctccgcacactggccggtgaccctgcat 141
|||||| ||| |||||| ||||||||||
Sbjct: 180 ctccgcgcaccggccggcgaccctgcat 207
>gb|BG560042.1|BG560042 RHIZ2_68_F12.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 518
Score = 111 bits (56), Expect = 9e-023
Identities = 81/88 (92%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 89 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 147
Query: 114 ctccgcacactggccggtgaccctgcat 141
|||||| ||| |||||| ||||||||||
Sbjct: 148 ctccgcgcaccggccggcgaccctgcat 175
>gb|CW107789.1|CW107789 104_478_11096786_116_34486_011 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11096786, DNA
sequence
Length = 525
Score = 109 bits (55), Expect = 4e-022
Identities = 77/83 (92%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
|||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 78 cggcgtcagcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 136
Query: 114 ctccgcacactggccggtgaccc 136
|||||| ||| |||||| |||||
Sbjct: 137 ctccgcgcaccggccggcgaccc 159
>gb|AW672547.1|AW672547 LG1_360_B08.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 533
Score = 109 bits (55), Expect = 4e-022
Identities = 77/83 (92%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
|||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 134 cggcgtcagcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 192
Query: 114 ctccgcacactggccggtgaccc 136
|||||| ||| |||||| |||||
Sbjct: 193 ctccgcgcaccggccggcgaccc 215
>gb|BZ334181.1|BZ334181 hx77d04.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hx77d04 5', DNA sequence
Length = 322
Score = 107 bits (54), Expect = 1e-021
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 219 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 161
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 160 ctccgcgcaccggccggcgaccctgc 135
>gb|CL173229.1|CL173229 104_376_10890731_116_31795_251 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10890731, DNA
sequence
Length = 675
Score = 107 bits (54), Expect = 1e-021
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
|||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 228 cggcgtcagcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 286
Query: 114 ctccgcacactggccggtgaccctgc 139
||||| ||| |||||| ||||||||
Sbjct: 287 ctccgggcaccggccggcgaccctgc 312
>gb|CW083793.1|CW083793 104_426_10945388_114_32377_078 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10945388, DNA
sequence
Length = 560
Score = 107 bits (54), Expect = 1e-021
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 433 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 375
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 374 ctccgcgcaccggccggcgaccctgc 349
>gb|CW102900.1|CW102900 104_471_11011592_116_34427_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11011592, DNA
sequence
Length = 641
Score = 107 bits (54), Expect = 1e-021
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
|||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 110 cggcgtcagcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 168
Query: 114 ctccgcacactggccggtgaccctgc 139
||||| ||| |||||| ||||||||
Sbjct: 169 ctccgggcaccggccggcgaccctgc 194
>gb|CW279963.1|CW279963 104_755_11407362_116_35442_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11407362, DNA
sequence
Length = 505
Score = 107 bits (54), Expect = 1e-021
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 258 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 200
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 199 ctccgcgcaccggccggcgaccctgc 174
>gb|CW313880.1|CW313880 104_804_11471525_116_35792_025 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11471525, DNA
sequence
Length = 711
Score = 107 bits (54), Expect = 1e-021
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 268 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 326
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 327 ctccgcgcaccggccggcgaccctgc 352
>gb|CW326190.1|CW326190 104_821_11478088_148_36068_058 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478088, DNA
sequence
Length = 668
Score = 107 bits (54), Expect = 1e-021
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 46 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 104
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 105 ctccgcgcaccggccggcgaccctgc 130
>gb|CW384309.1|CW384309 fsbb001f067e14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f067e14, DNA
sequence
Length = 608
Score = 107 bits (54), Expect = 1e-021
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 390 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 448
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 449 ctccgcgcaccggccggcgaccctgc 474
>gb|CW415909.1|CW415909 fsbb001f116d13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f116d13, DNA
sequence
Length = 631
Score = 107 bits (54), Expect = 1e-021
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 110 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 52
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 51 ctccgcgcaccggccggcgaccctgc 26
>gb|CW476948.1|CW476948 fsbb001f234a17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f234a17, DNA
sequence
Length = 556
Score = 107 bits (54), Expect = 1e-021
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 423 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 481
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 482 ctccgcgcaccggccggcgaccctgc 507
>gb|CW483968.1|CW483968 fsbb001f245n20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f245n20, DNA
sequence
Length = 717
Score = 107 bits (54), Expect = 1e-021
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 198 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 256
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 257 ctccgcgcaccggccggcgaccctgc 282
>gb|CW483969.1|CW483969 fsbb001f245n20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f245n20, DNA
sequence
Length = 679
Score = 107 bits (54), Expect = 1e-021
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 555 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 497
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 496 ctccgcgcaccggccggcgaccctgc 471
>gb|BE125894.1|BE125894 DG1_59_C09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 540
Score = 107 bits (54), Expect = 1e-021
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 140 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 198
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 199 ctccgcgcaccggccggcgaccctgc 224
>gb|BE598276.1|BE598276 PI1_68_C04.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 411
Score = 107 bits (54), Expect = 1e-021
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 34 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 92
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 93 ctccgcgcaccggccggcgaccctgc 118
>gb|BF421937.1|BF421937 FM1_9_D05.b2_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 395
Score = 107 bits (54), Expect = 1e-021
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 146 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 204
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 205 ctccgcgcaccggccggcgaccctgc 230
>gb|BG158865.1|BG158865 RHIZ2_43_E08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 487
Score = 107 bits (54), Expect = 1e-021
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 116 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 174
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 175 ctccgcgcaccggccggcgaccctgc 200
>gb|BG556607.1|BG556607 EM1_37_D01.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 476
Score = 107 bits (54), Expect = 1e-021
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 287 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 345
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 346 ctccgcgcaccggccggcgaccctgc 371
>gb|BI074682.1|BI074682 IP1_14_C08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 559
Score = 107 bits (54), Expect = 1e-021
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 150 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 208
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 209 ctccgcgcaccggccggcgaccctgc 234
>gb|BI074689.1|BI074689 IP1_14_C07.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 555
Score = 107 bits (54), Expect = 1e-021
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 150 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 208
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 209 ctccgcgcaccggccggcgaccctgc 234
>gb|BI245986.1|BI245986 IP1_66_C04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 469
Score = 107 bits (54), Expect = 1e-021
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 28 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 86
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 87 ctccgcgcaccggccggcgaccctgc 112
>gb|CD206895.1|CD206895 HS1_25_H10.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_25_H10_A012 5', mRNA sequence
Length = 720
Score = 107 bits (54), Expect = 1e-021
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
|||||||||||||| | |||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 149 cggcgtcagcggctcctcctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 207
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 208 ctccgcgcaccggccggcgaccctgc 233
>gb|CD226596.1|CD226596 CCC1_46_H04.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_46_H04_A007 5', mRNA sequence
Length = 658
Score = 107 bits (54), Expect = 1e-021
Identities = 78/86 (90%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
|||||||||| ||| | |||||||||||||||||||||| | |||||||||||||| |||
Sbjct: 39 cggcgtcagcagctcctcctcccgcctctcgccagtcgcctggcgccctcgcctcctgtc 98
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||||||| |||||| ||||||||
Sbjct: 99 ctccgcacaccggccggcgaccctgc 124
>gb|CD423186.1|CD423186 SA1_27_D11.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_27_D11_A002 5', mRNA sequence
Length = 730
Score = 107 bits (54), Expect = 1e-021
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 63 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 121
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 122 ctccgcgcaccggccggcgaccctgc 147
>gb|CD428300.1|CD428300 ETH1_28_A07.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_28_A07_A002 5', mRNA sequence
Length = 594
Score = 103 bits (52), Expect = 2e-020
Identities = 80/88 (90%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||| ||||||||||||| |||||||||||||||| |||
Sbjct: 73 cggcgtcggcggctccccctcccgcttctcgccagtcgcctcgcgccctcgcctcc-gtc 131
Query: 114 ctccgcacactggccggtgaccctgcat 141
|||||| ||| |||||| ||||||||||
Sbjct: 132 ctccgcgcaccggccggcgaccctgcat 159
>gb|BE125854.1|BE125854 DG1_58_F09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 489
Score = 101 bits (51), Expect = 9e-020
Identities = 76/83 (91%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 57 cgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtcctc 116
||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 92 cgtcagcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtcctc 150
Query: 117 cgcacactggccggtgaccctgc 139
||| ||| |||||| || |||||
Sbjct: 151 cgcgcaccggccggcgatcctgc 173
>gb|BE358380.1|BE358380 DG1_29_D10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 586
Score = 101 bits (51), Expect = 9e-020
Identities = 76/83 (91%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 57 cgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtcctc 116
|||| |||||| |||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 152 cgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtcctc 210
Query: 117 cgcacactggccggtgaccctgc 139
||| ||| |||||| ||||||||
Sbjct: 211 cgcgcaccggccggcgaccctgc 233
>gb|BE359864.1|BE359864 DG1_58_F09.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 565
Score = 101 bits (51), Expect = 9e-020
Identities = 76/83 (91%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 57 cgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtcctc 116
||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 92 cgtcagcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtcctc 150
Query: 117 cgcacactggccggtgaccctgc 139
||| ||| |||||| || |||||
Sbjct: 151 cgcgcaccggccggcgatcctgc 173
>gb|BE594718.1|BE594718 PI1_36_F10.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 371
Score = 101 bits (51), Expect = 9e-020
Identities = 76/83 (91%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 57 cgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtcctc 116
|||| |||||| |||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 116 cgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtcctc 174
Query: 117 cgcacactggccggtgaccctgc 139
||| ||| |||||| ||||||||
Sbjct: 175 cgcgcaccggccggcgaccctgc 197
>gb|BE594741.1|BE594741 PI1_36_H12.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 345
Score = 101 bits (51), Expect = 9e-020
Identities = 76/83 (91%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 57 cgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtcctc 116
|||| |||||| |||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 103 cgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtcctc 161
Query: 117 cgcacactggccggtgaccctgc 139
||| ||| |||||| ||||||||
Sbjct: 162 cgcgcaccggccggcgaccctgc 184
>gb|BG412666.1|BG412666 OV2_33_C06.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 513
Score = 101 bits (51), Expect = 9e-020
Identities = 76/83 (91%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 57 cgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtcctc 116
||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 152 cgtcagcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtcctc 210
Query: 117 cgcacactggccggtgaccctgc 139
||| ||| |||||| || |||||
Sbjct: 211 cgcgcaccggccggcgatcctgc 233
>gb|BG463570.1|BG463570 EM1_50_B12.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 608
Score = 101 bits (51), Expect = 9e-020
Identities = 76/83 (91%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 57 cgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtcctc 116
||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 132 cgtcagcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtcctc 190
Query: 117 cgcacactggccggtgaccctgc 139
||| ||| |||||| || |||||
Sbjct: 191 cgcgcaccggccggcgatcctgc 213
>gb|BG463610.1|BG463610 EM1_50_G02.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 438
Score = 101 bits (51), Expect = 9e-020
Identities = 76/83 (91%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 57 cgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtcctc 116
||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 83 cgtcagcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtcctc 141
Query: 117 cgcacactggccggtgaccctgc 139
||| ||| |||||| || |||||
Sbjct: 142 cgcgcaccggccggcgatcctgc 164
>gb|CB925938.1|CB925938 ABA1_30_E05.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_30_E05_A012 5', mRNA sequence
Length = 641
Score = 101 bits (51), Expect = 9e-020
Identities = 76/83 (91%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 57 cgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtcctc 116
|||| |||||| |||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 138 cgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtcctc 196
Query: 117 cgcacactggccggtgaccctgc 139
||| ||| |||||| ||||||||
Sbjct: 197 cgcgcaccggccggcgaccctgc 219
>gb|CN134613.1|CN134613 OX1_27_A02.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_27_A02_A002 5', mRNA sequence
Length = 712
Score = 101 bits (51), Expect = 9e-020
Identities = 76/83 (91%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 57 cgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtcctc 116
||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 137 cgtcagcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtcctc 195
Query: 117 cgcacactggccggtgaccctgc 139
||| ||| |||||| || |||||
Sbjct: 196 cgcgcaccggccggcgatcctgc 218
>gb|CW066870.1|CW066870 104_314_10523918_114_30126 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10523918, DNA
sequence
Length = 532
Score = 99.6 bits (50), Expect = 3e-019
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 62 gcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtcctccgcac 121
|||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||| |
Sbjct: 291 gcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtcctccgcgc 349
Query: 122 actggccggtgaccctgc 139
|| |||||| ||||||||
Sbjct: 350 accggccggcgaccctgc 367
>gb|CW186169.1|CW186169 104_604_11166426_148_36711_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11166426, DNA
sequence
Length = 603
Score = 99.6 bits (50), Expect = 3e-019
Identities = 78/86 (90%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||| ||||||||||||| |||||||||||||||| |||
Sbjct: 250 cggcgtcggcggctccccctcccgcttctcgccagtcgcctcgcgccctcgcctcc-gtc 308
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 309 ctccgcgcaccggccggcgaccctgc 334
>gb|CW222337.1|CW222337 104_657_11202321_148_37175_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11202321, DNA
sequence
Length = 682
Score = 99.6 bits (50), Expect = 3e-019
Identities = 78/86 (90%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| ||||||| |||||||| |||
Sbjct: 213 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccttcgcctcc-gtc 271
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 272 ctccgcgcaccggccggcgaccctgc 297
>gb|CW251115.1|CW251115 104_713_11223755_148_35058_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11223755, DNA
sequence
Length = 671
Score = 99.6 bits (50), Expect = 3e-019
Identities = 78/86 (90%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
|||||||||||||| |||||||||| ||||||||||| | |||||||||||||||| |||
Sbjct: 191 cggcgtcagcggctccccctcccgcttctcgccagtcacctcgcgccctcgcctcc-gtc 249
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 250 ctccgcgcaccggccggcgaccctgc 275
>gb|CW326189.1|CW326189 104_821_11478088_116_36069_058 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478088, DNA
sequence
Length = 637
Score = 99.6 bits (50), Expect = 3e-019
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 62 gcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtcctccgcac 121
|||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||| |
Sbjct: 633 gcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtcctccgcgc 575
Query: 122 actggccggtgaccctgc 139
|| |||||| ||||||||
Sbjct: 574 accggccggcgaccctgc 557
>gb|CW457559.1|CW457559 fsbb001f203g22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f203g22, DNA
sequence
Length = 287
Score = 99.6 bits (50), Expect = 3e-019
Identities = 78/86 (90%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 236 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 178
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| ||||| ||||||||
Sbjct: 177 ctccgcgcacctgccggcgaccctgc 152
>gb|BE360362.1|BE360362 DG1_63_C04.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 599
Score = 99.6 bits (50), Expect = 3e-019
Identities = 78/86 (90%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 124 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 182
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| ||||| ||||||||
Sbjct: 183 ctccgcgcacctgccggcgaccctgc 208
>gb|BG412064.1|BG412064 OV2_37_E11.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 521
Score = 99.6 bits (50), Expect = 3e-019
Identities = 78/86 (90%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 137 cggcgtcggcggctccccctcccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 195
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| ||||| ||||||||
Sbjct: 196 ctccgcgcacctgccggcgaccctgc 221
>gb|CD220505.1|CD220505 CCC1_67_D11.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_67_D11_A007 5', mRNA sequence
Length = 637
Score = 99.6 bits (50), Expect = 3e-019
Identities = 78/86 (90%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 54 cggcgtcagcggcttcccctcccgcctctcgccagtcgcttcgcgccctcgcctccggtc 113
||||||| |||||| ||||| |||||||||||||||||| |||||||||||||||| |||
Sbjct: 54 cggcgtcggcggctcccccttccgcctctcgccagtcgcctcgcgccctcgcctcc-gtc 112
Query: 114 ctccgcacactggccggtgaccctgc 139
|||||| ||| |||||| ||||||||
Sbjct: 113 ctccgcgcaccggccggcgaccctgc 138
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 175,322
Number of Sequences: 832831
Number of extensions: 175322
Number of successful extensions: 48271
Number of sequences better than 0.5: 415
Number of HSP's better than 0.5 without gapping: 398
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 47496
Number of HSP's gapped (non-prelim): 759
length of query: 714
length of database: 491,359,669
effective HSP length: 20
effective length of query: 694
effective length of database: 474,703,049
effective search space: 329443916006
effective search space used: 329443916006
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)