BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBTB.065K11F020919.3.1
(383 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW283840.2|AW283840 LG1_260_D05.g1_A002 Light Grown 1 (L... 141 5e-032
gb|BG559905.1|BG559905 RHIZ2_75_B04.g1_A003 Rhizome2 (RHIZ2... 135 3e-030
gb|BG241515.1|BG241515 RHIZ2_50_C08.g1_A003 Rhizome2 (RHIZ2... 133 1e-029
gb|BG465925.1|BG465925 RHIZ2_46_C10.g1_A003 Rhizome2 (RHIZ2... 133 1e-029
gb|CD431331.1|CD431331 ETH1_8_D10.b1_A002 Ethylene-treated ... 133 1e-029
gb|AF152550.1|AF152550 Sorghum bicolor chalcone synthase 3 ... 133 1e-029
gb|AW565339.1|AW565339 LG1_342_D02.g1_A002 Light Grown 1 (L... 127 8e-028
gb|BE357672.1|BE357672 DG1_21_G10.g1_A002 Dark Grown 1 (DG1... 127 8e-028
gb|BE357828.1|BE357828 DG1_22_G09.g1_A002 Dark Grown 1 (DG1... 127 8e-028
gb|BE358855.1|BE358855 DG1_32_D08.g1_A002 Dark Grown 1 (DG1... 127 8e-028
gb|BE361236.1|BE361236 DG1_70_C01.g1_A002 Dark Grown 1 (DG1... 127 8e-028
gb|BG605853.1|BG605853 RHIZ2_82_C10.g1_A003 Rhizome2 (RHIZ2... 127 8e-028
gb|CD233146.1|CD233146 SS1_12_D09.b1_A012 Salt-stressed see... 127 8e-028
gb|CF430205.1|CF430205 PH1_26_C05.g1_A002 Phosphorous-defic... 127 8e-028
gb|CN137838.1|CN137838 OX1_60_B02.b1_A002 Oxidatively-stres... 127 8e-028
gb|CX606271.1|CX606271 ANR1_2_C12.b1_A002 Anaerobic roots S... 127 8e-028
gb|CX606791.1|CX606791 ANR1_5_B02.b1_A002 Anaerobic roots S... 127 8e-028
gb|CX609856.1|CX609856 ANR1_15_D09.b1_A002 Anaerobic roots ... 127 8e-028
gb|CX611210.1|CX611210 ANR1_23_F10.b1_A002 Anaerobic roots ... 127 8e-028
gb|CX611549.1|CX611549 ANR1_25_G03.b1_A002 Anaerobic roots ... 127 8e-028
gb|CX612377.1|CX612377 GABR1_2_D02.b1_A002 GA- or brassinol... 127 8e-028
gb|CX612543.1|CX612543 GABR1_3_B09.b1_A002 GA- or brassinol... 127 8e-028
gb|CX615996.1|CX615996 GABR1_25_E11.b1_A002 GA- or brassino... 127 8e-028
gb|CX616163.1|CX616163 GABR1_26_F05.b1_A002 GA- or brassino... 127 8e-028
gb|CX618220.1|CX618220 GABR1_38_H01.b1_A002 GA- or brassino... 127 8e-028
gb|CX621311.1|CX621311 GABR1_57_H07.b1_A002 GA- or brassino... 127 8e-028
gb|AF152552.1|AF152552 Sorghum bicolor chalcone synthase 5 ... 127 8e-028
gb|CF428002.1|CF428002 PH1_12_E10.b1_A002 Phosphorous-defic... 119 2e-025
gb|CF431883.1|CF431883 NIT1_11_E04.b1_A002 Nitrogen-deficie... 119 2e-025
gb|CN149370.1|CN149370 WOUND1_62_H04.b1_A002 Wounded leaves... 119 2e-025
gb|CN150411.1|CN150411 WOUND1_69_A12.b1_A002 Wounded leaves... 119 2e-025
gb|CX623185.1|CX623185 GABR1_68_E08.b1_A002 GA- or brassino... 119 2e-025
gb|CW070887.1|CW070887 104_323_10591294_116_30485 Sorghum m... 117 8e-025
gb|AW284288.2|AW284288 LG1_269_B01.g1_A002 Light Grown 1 (L... 111 5e-023
gb|CD462947.1|CD462947 ETH1_41_C09.b1_A002 Ethylene-treated... 111 5e-023
gb|CF428995.1|CF428995 PH1_19_C12.b1_A002 Phosphorous-defic... 111 5e-023
gb|CF431308.1|CF431308 NIT1_5_E11.b1_A002 Nitrogen-deficien... 111 5e-023
gb|CN135039.1|CN135039 OX1_30_D10.b1_A002 Oxidatively-stres... 111 5e-023
gb|CN138700.1|CN138700 OX1_13_H11.b1_A002 Oxidatively-stres... 111 5e-023
gb|CX615434.1|CX615434 GABR1_20_D03.b1_A002 GA- or brassino... 111 5e-023
gb|CX622327.1|CX622327 GABR1_63_G08.b2_A002 GA- or brassino... 111 5e-023
gb|AF152549.1|AF152549 Sorghum bicolor chalcone synthase 2 ... 111 5e-023
gb|AF152553.1|AF152553 Sorghum bicolor chalcone synthase 6 ... 111 5e-023
gb|CX608033.1|CX608033 ANR1_32_F01.b1_A002 Anaerobic roots ... 107 7e-022
gb|CN124863.1|CN124863 RHOH1_7_H06.b1_A002 Acid- and alkali... 105 3e-021
gb|AW283504.1|AW283504 LG1_265_C05.g1_A002 Light Grown 1 (L... 103 1e-020
gb|AW283518.1|AW283518 LG1_265_A05.g1_A002 Light Grown 1 (L... 103 1e-020
gb|AW565912.1|AW565912 LG1_353_E05.g1_A002 Light Grown 1 (L... 103 1e-020
gb|CD428198.1|CD428198 ETH1_28_C04.b1_A002 Ethylene-treated... 103 1e-020
gb|CD430484.1|CD430484 ETH1_19_D10.b1_A002 Ethylene-treated... 103 1e-020
gb|CF432833.1|CF432833 NIT1_19_F03.b1_A002 Nitrogen-deficie... 103 1e-020
gb|CF433944.1|CF433944 NIT1_31_C08.b1_A002 Nitrogen-deficie... 103 1e-020
gb|CN138481.1|CN138481 OX1_64_C03.b1_A002 Oxidatively-stres... 103 1e-020
gb|CX612383.1|CX612383 GABR1_2_D08.b1_A002 GA- or brassinol... 103 1e-020
gb|AF152551.1|AF152551 Sorghum bicolor chalcone synthase 4 ... 103 1e-020
gb|CX615465.1|CX615465 GABR1_20_G03.b1_A002 GA- or brassino... 100 2e-019
gb|BE366441.1|BE366441 PI1_33_A03.g1_A002 Pathogen induced ... 98 7e-019
gb|CD213169.1|CD213169 HS1_29_F02.b1_A012 Heat-shocked seed... 94 1e-017
gb|CX616315.1|CX616315 GABR1_27_E07.b1_A002 GA- or brassino... 94 1e-017
gb|CW378899.1|CW378899 fsbb001f057o03k0 Sorghum methylation... 92 4e-017
gb|CW419724.1|CW419724 fsbb001f124l09f0 Sorghum methylation... 92 4e-017
gb|BE355743.1|BE355743 DG1_116_C08.g1_A002 Dark Grown 1 (DG... 92 4e-017
gb|BE597283.1|BE597283 PI1_70_D03.g1_A002 Pathogen induced ... 92 4e-017
gb|BE597782.1|BE597782 PI1_65_C02.g1_A002 Pathogen induced ... 92 4e-017
gb|BE597962.1|BE597962 PI1_67_F08.g1_A002 Pathogen induced ... 92 4e-017
gb|BE601240.1|BE601240 PI1_90_F05.g1_A002 Pathogen induced ... 92 4e-017
gb|BF177058.1|BF177058 EM1_3_B02.g1_A002 Embryo 1 (EM1) Sor... 92 4e-017
gb|BM317945.1|BM317945 PI1_13_D11.g9_A002 Pathogen induced ... 92 4e-017
gb|BM327322.1|BM327322 PIC1_12_A10.g1_A002 Pathogen-infecte... 92 4e-017
gb|CD430325.1|CD430325 ETH1_18_G09.b1_A002 Ethylene-treated... 92 4e-017
gb|CD430674.1|CD430674 ETH1_20_C06.b1_A002 Ethylene-treated... 92 4e-017
gb|CD463544.1|CD463544 ETH1_45_A06.b1_A002 Ethylene-treated... 92 4e-017
gb|CN133901.1|CN133901 OX1_19_B11.b1_A002 Oxidatively-stres... 92 4e-017
gb|CN134537.1|CN134537 OX1_27_A10.b1_A002 Oxidatively-stres... 92 4e-017
gb|AF152554.1|AF152554 Sorghum bicolor chalcone synthase 7 ... 92 4e-017
gb|AY069951.1| Sorghum bicolor chalcone synthase 8 mRNA, co... 92 4e-017
gb|CD462509.1|CD462509 ETH1_38_B05.b1_A002 Ethylene-treated... 84 1e-014
gb|CF432638.1|CF432638 NIT1_18_E06.b1_A002 Nitrogen-deficie... 84 1e-014
gb|CN125053.1|CN125053 RHOH1_8_C09.g1_A002 Acid- and alkali... 84 1e-014
gb|AF152548.1|AF152548 Sorghum bicolor chalcone synthase 1 ... 84 1e-014
gb|CF431104.1|CF431104 NIT1_6_D10.b1_A002 Nitrogen-deficien... 82 4e-014
gb|CD431531.1|CD431531 ETH1_9_E07.b1_A002 Ethylene-treated ... 76 3e-012
gb|CN137453.1|CN137453 OX1_57_H07.b1_A002 Oxidatively-stres... 76 3e-012
gb|BI075646.1|BI075646 IP1_23_C09.g1_A002 Immature pannicle... 74 1e-011
gb|CN141822.1|CN141822 WOUND1_2_C07.b1_A002 Wounded leaves ... 74 1e-011
gb|CX619715.1|CX619715 GABR1_47_G05.b1_A002 GA- or brassino... 74 1e-011
gb|BE363966.1|BE363966 PI1_10_H06.g1_A002 Pathogen induced ... 68 6e-010
gb|CF431127.1|CF431127 NIT1_6_H12.b1_A002 Nitrogen-deficien... 66 2e-009
gb|CX617869.1|CX617869 GABR1_36_G03.b1_A002 GA- or brassino... 66 2e-009
gb|CD232848.1|CD232848 SS1_10_F02.b1_A012 Salt-stressed see... 64 1e-008
gb|CN135967.1|CN135967 OX1_40_B06.b1_A002 Oxidatively-stres... 64 1e-008
gb|CL183869.1|CL183869 104_396_10898460_116_31924_300 Sorgh... 60 2e-007
gb|CW022940.1|CW022940 104_162_10432146_1_30008 Sorghum met... 60 2e-007
gb|CW032157.1|CW032157 104_261_10501220_115_30364 Sorghum m... 60 2e-007
gb|CW372555.1|CW372555 fsbb001f048i03k0 Sorghum methylation... 60 2e-007
gb|BQ656102.1|BQ656102 pRC1079 Sorghum halepense rhizome cD... 60 2e-007
gb|CD206076.1|CD206076 HS1_20_D02.b1_A012 Heat-shocked seed... 50 1e-004
gb|CN141529.1|CN141529 OX1_52_E12.b1_A002 Oxidatively-stres... 46 0.002
gb|AW672448.1|AW672448 LG1_359_D12.g1_A002 Light Grown 1 (L... 40 0.14
>gb|AW283840.2|AW283840 LG1_260_D05.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 225
Score = 141 bits (71), Expect = 5e-032
Identities = 92/99 (92%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 38 gactggggcgtgctcttcggcttcggccccgggctcaccgtcgagaccgtcgtgctccac 97
Query: 61 agcgtccccatcaccaccggagcgcccaccgccgcctga 99
||||| |||||||||||||||||| ||| ||||||||||
Sbjct: 98 agcgttcccatcaccaccggagcggccatcgccgcctga 136
>gb|BG559905.1|BG559905 RHIZ2_75_B04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 535
Score = 135 bits (68), Expect = 3e-030
Identities = 92/100 (92%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 166 gactggggcgtgctcttcggcttcggtcccgggctcaccgtcgagaccgtcgtgctccac 225
Query: 61 agcgtccccatcaccaccggagcgcccaccgccgcctgag 100
|||||||||||||||||||||||| ||| | |||||||||
Sbjct: 226 agcgtccccatcaccaccggagcggccatcaccgcctgag 265
>gb|BG241515.1|BG241515 RHIZ2_50_C08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 511
Score = 133 bits (67), Expect = 1e-029
Identities = 91/99 (91%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 319 gactggggcgtgctcttcggcttcggccccgggctcaccgtcgagaccgtcgtgctccac 378
Query: 61 agcgtccccatcaccaccggagcgcccaccgccgcctga 99
||||| |||||||||||||||||| ||| | ||||||||
Sbjct: 379 agcgttcccatcaccaccggagcggccatcaccgcctga 417
>gb|BG465925.1|BG465925 RHIZ2_46_C10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 559
Score = 133 bits (67), Expect = 1e-029
Identities = 91/99 (91%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 315 gactggggcgtgctcttcggcttcggccccgggctcaccgtcgagaccgtcgtgctccac 374
Query: 61 agcgtccccatcaccaccggagcgcccaccgccgcctga 99
||||| |||||||||||||||||| ||| | ||||||||
Sbjct: 375 agcgttcccatcaccaccggagcggccatcaccgcctga 413
>gb|CD431331.1|CD431331 ETH1_8_D10.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_8_D10_A002 3', mRNA sequence
Length = 558
Score = 133 bits (67), Expect = 1e-029
Identities = 91/99 (91%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 312 gactggggcgtgctcttcggcttcggccccgggctcaccgtcgagaccgtcgtgctccac 371
Query: 61 agcgtccccatcaccaccggagcgcccaccgccgcctga 99
||||| |||||||||||||||||| ||| | ||||||||
Sbjct: 372 agcgttcccatcaccaccggagcggccatcaccgcctga 410
>gb|AF152550.1|AF152550 Sorghum bicolor chalcone synthase 3 (CHS3) gene, complete cds
Length = 2137
Score = 133 bits (67), Expect = 1e-029
Identities = 91/99 (91%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct: 1815 gactggggcgtgctcttcggcttcggccccgggctcaccgtcgagaccgtcgtgctccac 1874
Query: 61 agcgtccccatcaccaccggagcgcccaccgccgcctga 99
||||| |||||||||||||||||| ||| | ||||||||
Sbjct: 1875 agcgttcccatcaccaccggagcggccatcaccgcctga 1913
>gb|AW565339.1|AW565339 LG1_342_D02.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 660
Score = 127 bits (64), Expect = 8e-028
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 187 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 246
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 247 agcgtccccatcaccaccggagcg 270
Score = 73.8 bits (37), Expect = 1e-011
Identities = 48/51 (94%), Gaps = 3/51 (5%)
Strand = Plus / Plus
Query: 264 gcatggatggtgaggtattgtatagtacctgtgtaagacaagcttggctgg 314
|||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 579 gcatggatggtgaggtattgtata---cctgtgtaagacaagcttggctgg 626
>gb|BE357672.1|BE357672 DG1_21_G10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 613
Score = 127 bits (64), Expect = 8e-028
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 349 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 408
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 409 agcgtccccatcaccaccggagcg 432
>gb|BE357828.1|BE357828 DG1_22_G09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 677
Score = 127 bits (64), Expect = 8e-028
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 413 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 472
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 473 agcgtccccatcaccaccggagcg 496
>gb|BE358855.1|BE358855 DG1_32_D08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 533
Score = 127 bits (64), Expect = 8e-028
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 322 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 381
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 382 agcgtccccatcaccaccggagcg 405
>gb|BE361236.1|BE361236 DG1_70_C01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 512
Score = 127 bits (64), Expect = 8e-028
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 135 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 194
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 195 agcgtccccatcaccaccggagcg 218
>gb|BG605853.1|BG605853 RHIZ2_82_C10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 656
Score = 127 bits (64), Expect = 8e-028
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 288 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 347
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 348 agcgtccccatcaccaccggagcg 371
>gb|CD233146.1|CD233146 SS1_12_D09.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_12_D09_A012 3', mRNA sequence
Length = 634
Score = 127 bits (64), Expect = 8e-028
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 270 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 329
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 330 agcgtccccatcaccaccggagcg 353
>gb|CF430205.1|CF430205 PH1_26_C05.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_26_C05_A002 5', mRNA sequence
Length = 688
Score = 127 bits (64), Expect = 8e-028
Identities = 79/84 (94%)
Strand = Plus / Minus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 395 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 336
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 335 agcgtccccatcaccaccggagcg 312
>gb|CN137838.1|CN137838 OX1_60_B02.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_60_B02_A002 3', mRNA sequence
Length = 472
Score = 127 bits (64), Expect = 8e-028
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 161 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 220
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 221 agcgtccccatcaccaccggagcg 244
>gb|CX606271.1|CX606271 ANR1_2_C12.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_2_C12_A002 3', mRNA sequence
Length = 688
Score = 127 bits (64), Expect = 8e-028
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 227 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 286
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 287 agcgtccccatcaccaccggagcg 310
Score = 73.8 bits (37), Expect = 1e-011
Identities = 48/51 (94%), Gaps = 3/51 (5%)
Strand = Plus / Plus
Query: 264 gcatggatggtgaggtattgtatagtacctgtgtaagacaagcttggctgg 314
|||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 619 gcatggatggtgaggtattgtata---cctgtgtaagacaagcttggctgg 666
>gb|CX606791.1|CX606791 ANR1_5_B02.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_5_B02_A002 3', mRNA sequence
Length = 676
Score = 127 bits (64), Expect = 8e-028
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 198 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 257
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 258 agcgtccccatcaccaccggagcg 281
Score = 73.8 bits (37), Expect = 1e-011
Identities = 48/51 (94%), Gaps = 3/51 (5%)
Strand = Plus / Plus
Query: 264 gcatggatggtgaggtattgtatagtacctgtgtaagacaagcttggctgg 314
|||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 590 gcatggatggtgaggtattgtata---cctgtgtaagacaagcttggctgg 637
>gb|CX609856.1|CX609856 ANR1_15_D09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_15_D09_A002 3', mRNA sequence
Length = 738
Score = 127 bits (64), Expect = 8e-028
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 233 gactggggcgtgctcttcggcttcggtcccgggctcaccgtcgagaccgtcgtgctccac 292
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 293 agcgtccccatcaccaccggagcg 316
Score = 73.8 bits (37), Expect = 1e-011
Identities = 48/51 (94%), Gaps = 3/51 (5%)
Strand = Plus / Plus
Query: 264 gcatggatggtgaggtattgtatagtacctgtgtaagacaagcttggctgg 314
|||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 625 gcatggatggtgaggtattgtata---cctgtgtaagacaagcttggctgg 672
>gb|CX611210.1|CX611210 ANR1_23_F10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_23_F10_A002 3', mRNA sequence
Length = 670
Score = 127 bits (64), Expect = 8e-028
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 198 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 257
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 258 agcgtccccatcaccaccggagcg 281
Score = 73.8 bits (37), Expect = 1e-011
Identities = 48/51 (94%), Gaps = 3/51 (5%)
Strand = Plus / Plus
Query: 264 gcatggatggtgaggtattgtatagtacctgtgtaagacaagcttggctgg 314
|||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 590 gcatggatggtgaggtattgtata---cctgtgtaagacaagcttggctgg 637
>gb|CX611549.1|CX611549 ANR1_25_G03.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_25_G03_A002 3', mRNA sequence
Length = 747
Score = 127 bits (64), Expect = 8e-028
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 369 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 428
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 429 agcgtccccatcaccaccggagcg 452
>gb|CX612377.1|CX612377 GABR1_2_D02.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_2_D02_A002 3', mRNA sequence
Length = 778
Score = 127 bits (64), Expect = 8e-028
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 415 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 474
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 475 agcgtccccatcaccaccggagcg 498
>gb|CX612543.1|CX612543 GABR1_3_B09.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_3_B09_A002 3', mRNA sequence
Length = 717
Score = 127 bits (64), Expect = 8e-028
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 365 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 424
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 425 agcgtccccatcaccaccggagcg 448
>gb|CX615996.1|CX615996 GABR1_25_E11.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_25_E11_A002 3', mRNA sequence
Length = 708
Score = 127 bits (64), Expect = 8e-028
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 345 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 404
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 405 agcgtccccatcaccaccggagcg 428
>gb|CX616163.1|CX616163 GABR1_26_F05.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_26_F05_A002 3', mRNA sequence
Length = 423
Score = 127 bits (64), Expect = 8e-028
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 50 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 109
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 110 agcgtccccatcaccaccggagcg 133
>gb|CX618220.1|CX618220 GABR1_38_H01.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_38_H01_A002 3', mRNA sequence
Length = 656
Score = 127 bits (64), Expect = 8e-028
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 190 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 249
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 250 agcgtccccatcaccaccggagcg 273
Score = 73.8 bits (37), Expect = 1e-011
Identities = 48/51 (94%), Gaps = 3/51 (5%)
Strand = Plus / Plus
Query: 264 gcatggatggtgaggtattgtatagtacctgtgtaagacaagcttggctgg 314
|||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 582 gcatggatggtgaggtattgtata---cctgtgtaagacaagcttggctgg 629
>gb|CX621311.1|CX621311 GABR1_57_H07.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_57_H07_A002 3', mRNA sequence
Length = 540
Score = 127 bits (64), Expect = 8e-028
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 173 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 232
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 233 agcgtccccatcaccaccggagcg 256
>gb|AF152552.1|AF152552 Sorghum bicolor chalcone synthase 5 (CHS5) gene, complete cds
Length = 3960
Score = 127 bits (64), Expect = 8e-028
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 3535 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 3594
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 3595 agcgtccccatcaccaccggagcg 3618
Score = 48.1 bits (24), Expect = 6e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 264 gcatggatggtgaggtattgtata 287
||||||||||||||||||||||||
Sbjct: 3927 gcatggatggtgaggtattgtata 3950
>gb|CF428002.1|CF428002 PH1_12_E10.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_12_E10_A002 3', mRNA sequence
Length = 479
Score = 119 bits (60), Expect = 2e-025
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 101 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 160
Query: 61 agcgtccccatcaccaccggagcg 84
|||||||||||| |||||||||||
Sbjct: 161 agcgtccccatccccaccggagcg 184
>gb|CF431883.1|CF431883 NIT1_11_E04.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_11_E04_A002 3', mRNA sequence
Length = 434
Score = 119 bits (60), Expect = 2e-025
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 82 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 141
Query: 61 agcgtccccatcaccaccggagcg 84
|| |||||||||||||||||||||
Sbjct: 142 agggtccccatcaccaccggagcg 165
>gb|CN149370.1|CN149370 WOUND1_62_H04.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_62_H04_A002 3', mRNA sequence
Length = 736
Score = 119 bits (60), Expect = 2e-025
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| || ||||| ||||| || || |||||||||||||||||||||||||||
Sbjct: 285 gactggggcgtgctattcggcttcggtcctgggctcaccgtcgagaccgtcgtgctccac 344
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 345 agcgtccccatcaccaccggagcg 368
Score = 73.8 bits (37), Expect = 1e-011
Identities = 48/51 (94%), Gaps = 3/51 (5%)
Strand = Plus / Plus
Query: 264 gcatggatggtgaggtattgtatagtacctgtgtaagacaagcttggctgg 314
|||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 677 gcatggatggtgaggtattgtata---cctgtgtaagacaagcttggctgg 724
>gb|CN150411.1|CN150411 WOUND1_69_A12.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_69_A12_A002 3', mRNA sequence
Length = 747
Score = 119 bits (60), Expect = 2e-025
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||| ||||||||||||||||||
Sbjct: 270 gactggggcgtgctcttcggcttcggtcctgggctcaccgtggagaccgtcgtgctccac 329
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 330 agcgtccccatcaccaccggagcg 353
Score = 73.8 bits (37), Expect = 1e-011
Identities = 48/51 (94%), Gaps = 3/51 (5%)
Strand = Plus / Plus
Query: 264 gcatggatggtgaggtattgtatagtacctgtgtaagacaagcttggctgg 314
|||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 662 gcatggatggtgaggtattgtata---cctgtgtaagacaagcttggctgg 709
>gb|CX623185.1|CX623185 GABR1_68_E08.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_68_E08_A002 3', mRNA sequence
Length = 618
Score = 119 bits (60), Expect = 2e-025
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||| |||||||| ||||| || || |||||||||| ||||||||||||||||
Sbjct: 248 gactggggcgtgctcttcggcttcggtcctgggctcaccgtcgggaccgtcgtgctccac 307
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 308 agcgtccccatcaccaccggagcg 331
>gb|CW070887.1|CW070887 104_323_10591294_116_30485 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10591294, DNA
sequence
Length = 650
Score = 117 bits (59), Expect = 8e-025
Identities = 89/99 (89%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||||||||| || || ||||| || |||||||||||||||||||||||||||
Sbjct: 7 gactggggcgtcctctttggctttggccccgggctcaccgtcgagaccgtcgtgctccac 66
Query: 61 agcgtccccatcaccaccggagcgcccaccgccgcctga 99
|| || |||||||||||||||||| ||| | ||||||||
Sbjct: 67 agtgttcccatcaccaccggagcggccatcaccgcctga 105
>gb|AW284288.2|AW284288 LG1_269_B01.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 406
Score = 111 bits (56), Expect = 5e-023
Identities = 77/84 (91%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
||||||||||||||||| || || ||||| || |||||||||||||||||||||||||||
Sbjct: 161 gactggggcgtcctctttggctttggccccgggctcaccgtcgagaccgtcgtgctccac 220
Query: 61 agcgtccccatcaccaccggagcg 84
|| || ||||||||||||||||||
Sbjct: 221 agtgttcccatcaccaccggagcg 244
>gb|CD462947.1|CD462947 ETH1_41_C09.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_41_C09_A002 3', mRNA sequence
Length = 614
Score = 111 bits (56), Expect = 5e-023
Identities = 77/84 (91%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||| |||||||| || || ||||| || |||||||||||||| ||||||||||||
Sbjct: 373 gactggggtgtcctctttggctttggccccgggctcaccgtcgagactgtcgtgctccac 432
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 433 agcgtccccatcaccaccggagcg 456
>gb|CF428995.1|CF428995 PH1_19_C12.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_19_C12_A002 3', mRNA sequence
Length = 509
Score = 111 bits (56), Expect = 5e-023
Identities = 77/84 (91%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||| |||||||| || || ||||| || |||||||||||||| ||||||||||||
Sbjct: 270 gactggggtgtcctctttggctttggccccgggctcaccgtcgagactgtcgtgctccac 329
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 330 agcgtccccatcaccaccggagcg 353
>gb|CF431308.1|CF431308 NIT1_5_E11.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_5_E11_A002 3', mRNA sequence
Length = 485
Score = 111 bits (56), Expect = 5e-023
Identities = 77/84 (91%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||| |||||||| || || ||||| || |||||||||||||| ||||||||||||
Sbjct: 248 gactggggtgtcctctttggctttggccccgggctcaccgtcgagactgtcgtgctccac 307
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 308 agcgtccccatcaccaccggagcg 331
>gb|CN135039.1|CN135039 OX1_30_D10.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_30_D10_A002 3', mRNA sequence
Length = 697
Score = 111 bits (56), Expect = 5e-023
Identities = 77/84 (91%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||| |||||||| || || ||||| || |||||||||||||| ||||||||||||
Sbjct: 451 gactggggtgtcctctttggctttggccccgggctcaccgtcgagactgtcgtgctccac 510
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 511 agcgtccccatcaccaccggagcg 534
>gb|CN138700.1|CN138700 OX1_13_H11.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_13_H11_A002 3', mRNA sequence
Length = 751
Score = 111 bits (56), Expect = 5e-023
Identities = 77/84 (91%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||| |||||||| || || ||||| || |||||||||||||| ||||||||||||
Sbjct: 510 gactggggtgtcctctttggctttggccccgggctcaccgtcgagactgtcgtgctccac 569
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 570 agcgtccccatcaccaccggagcg 593
>gb|CX615434.1|CX615434 GABR1_20_D03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_20_D03_A002 3', mRNA sequence
Length = 758
Score = 111 bits (56), Expect = 5e-023
Identities = 77/84 (91%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||| |||||||| || || ||||| || |||||||||||||| ||||||||||||
Sbjct: 523 gactggggtgtcctctttggctttggccccgggctcaccgtcgagactgtcgtgctccac 582
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 583 agcgtccccatcaccaccggagcg 606
>gb|CX622327.1|CX622327 GABR1_63_G08.b2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_63_G08_A002 3', mRNA sequence
Length = 581
Score = 111 bits (56), Expect = 5e-023
Identities = 77/84 (91%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||| |||||||| || || ||||| || |||||||||||||| ||||||||||||
Sbjct: 345 gactggggtgtcctctttggctttggccccgggctcaccgtcgagactgtcgtgctccac 404
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 405 agcgtccccatcaccaccggagcg 428
>gb|AF152549.1|AF152549 Sorghum bicolor chalcone synthase 2 (CHS2) gene, complete cds
Length = 2100
Score = 111 bits (56), Expect = 5e-023
Identities = 86/96 (89%)
Strand = Plus / Plus
Query: 4 tggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccacagc 63
|||||||||||||| || || ||||| || |||||||||||||||||||||||||||||
Sbjct: 1856 tggggcgtcctctttggctttggccccgggctcaccgtcgagaccgtcgtgctccacagt 1915
Query: 64 gtccccatcaccaccggagcgcccaccgccgcctga 99
|| |||||||||||||||||| ||| | ||||||||
Sbjct: 1916 gttcccatcaccaccggagcggccatcaccgcctga 1951
>gb|AF152553.1|AF152553 Sorghum bicolor chalcone synthase 6 (CHS6) gene, complete cds
Length = 3366
Score = 111 bits (56), Expect = 5e-023
Identities = 77/84 (91%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||| |||||||| || || ||||| || |||||||||||||| ||||||||||||
Sbjct: 3144 gactggggtgtcctctttggctttggccccgggctcaccgtcgagactgtcgtgctccac 3203
Query: 61 agcgtccccatcaccaccggagcg 84
||||||||||||||||||||||||
Sbjct: 3204 agcgtccccatcaccaccggagcg 3227
>gb|CX608033.1|CX608033 ANR1_32_F01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_32_F01_A002 3', mRNA sequence
Length = 586
Score = 107 bits (54), Expect = 7e-022
Identities = 75/82 (91%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||| |||||||| || || ||||| || |||||||||||||| ||||||||||||
Sbjct: 343 gactggggtgtcctctttggctttggccccgggctcaccgtcgagactgtcgtgctccac 402
Query: 61 agcgtccccatcaccaccggag 82
||||||||||||||||||||||
Sbjct: 403 agcgtccccatcaccaccggag 424
>gb|CN124863.1|CN124863 RHOH1_7_H06.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_7_H06_A002 3', mRNA sequence
Length = 795
Score = 105 bits (53), Expect = 3e-021
Identities = 74/81 (91%)
Strand = Plus / Plus
Query: 4 tggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccacagc 63
||||| |||||||| || || ||||| || |||||||||||||| |||||||||||||||
Sbjct: 563 tggggtgtcctctttggctttggccccgggctcaccgtcgagactgtcgtgctccacagc 622
Query: 64 gtccccatcaccaccggagcg 84
|||||||||||||||||||||
Sbjct: 623 gtccccatcaccaccggagcg 643
>gb|AW283504.1|AW283504 LG1_265_C05.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 591
Score = 103 bits (52), Expect = 1e-020
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||| ||||||||||| |||||||| || |||||||| |||||||||||||||||
Sbjct: 317 gactggggtgtcctcttcggcttcggccccgggctcaccgttgagaccgtcgtgctccat 376
Query: 61 agcgtccccatcaccaccgg 80
||||||||||| ||||||||
Sbjct: 377 agcgtccccattaccaccgg 396
>gb|AW283518.1|AW283518 LG1_265_A05.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 590
Score = 103 bits (52), Expect = 1e-020
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||| ||||||||||| |||||||| || |||||||| |||||||||||||||||
Sbjct: 316 gactggggtgtcctcttcggcttcggccccgggctcaccgttgagaccgtcgtgctccat 375
Query: 61 agcgtccccatcaccaccgg 80
||||||||||| ||||||||
Sbjct: 376 agcgtccccattaccaccgg 395
>gb|AW565912.1|AW565912 LG1_353_E05.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 544
Score = 103 bits (52), Expect = 1e-020
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||| ||||||||||| |||||||| || |||||||| |||||||||||||||||
Sbjct: 286 gactggggtgtcctcttcggcttcggccccgggctcaccgttgagaccgtcgtgctccat 345
Query: 61 agcgtccccatcaccaccgg 80
||||||||||| ||||||||
Sbjct: 346 agcgtccccattaccaccgg 365
>gb|CD428198.1|CD428198 ETH1_28_C04.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_28_C04_A002 3', mRNA sequence
Length = 599
Score = 103 bits (52), Expect = 1e-020
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||| ||||||||||| |||||||| || |||||||| |||||||||||||||||
Sbjct: 346 gactggggtgtcctcttcggcttcggccccgggctcaccgttgagaccgtcgtgctccat 405
Query: 61 agcgtccccatcaccaccgg 80
||||||||||| ||||||||
Sbjct: 406 agcgtccccattaccaccgg 425
>gb|CD430484.1|CD430484 ETH1_19_D10.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_19_D10_A002 3', mRNA sequence
Length = 595
Score = 103 bits (52), Expect = 1e-020
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 1 gactggggcgtcctcttcggtttcggcccgggcctcaccgtcgagaccgtcgtgctccac 60
|||||||| ||||||||||| |||||||| || |||||||| |||||||||||||||||
Sbjct: 322 gactggggtgtcctcttcggcttcggccccgggctcaccgttgagaccgtcgtgctccat 381
Query: 61 agcgtccccatcaccaccgg 80
||||||||||| ||||||||
Sbjct: 382 agcgtccccattaccaccgg 401
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 106,518
Number of Sequences: 832831
Number of extensions: 106518
Number of successful extensions: 29576
Number of sequences better than 0.5: 99
Number of HSP's better than 0.5 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29410
Number of HSP's gapped (non-prelim): 148
length of query: 383
length of database: 491,359,669
effective HSP length: 19
effective length of query: 364
effective length of database: 475,535,880
effective search space: 173095060320
effective search space used: 173095060320
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)