BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAS2h09.yg.3.5
(1992 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW672062.1|AW672062 LG1_354_G05.b1_A002 Light Grown 1 (L... 944 0.0
gb|CN139844.1|CN139844 OX1_24_B03.g1_A002 Oxidatively-stres... 892 0.0
gb|BI098957.1|BI098957 IP1_35_D12.b1_A002 Immature pannicle... 848 0.0
gb|BF655998.1|BF655998 FM1_42_F08.b1_A003 Floral-Induced Me... 737 0.0
gb|BI074901.1|BI074901 IP1_17_C12.g1_A002 Immature pannicle... 724 0.0
gb|BI098521.1|BI098521 IP1_33_D12.g1_A002 Immature pannicle... 603 e-170
gb|BI075197.1|BI075197 IP1_17_C12.b1_A002 Immature pannicle... 587 e-165
gb|BF655926.1|BF655926 FM1_42_F08.g1_A003 Floral-Induced Me... 583 e-164
gb|BI098805.1|BI098805 IP1_33_D12.b1_A002 Immature pannicle... 561 e-158
gb|BI098588.1|BI098588 IP1_34_D01.g1_A002 Immature pannicle... 486 e-135
gb|BI098670.1|BI098670 IP1_35_D12.g1_A002 Immature pannicle... 472 e-131
gb|BG050179.1|BG050179 FM1_67_F11.b1_A003 Floral-Induced Me... 400 e-109
gb|BI098875.1|BI098875 IP1_34_D01.b1_A002 Immature pannicle... 398 e-109
gb|DN551956.1|DN551956 pSPR-RT-MR-H2_G12_S202 pSPR Sorghum ... 325 9e-087
gb|CD226268.1|CD226268 CCC1_44_D06.g1_A007 Callus culture/c... 313 3e-083
gb|CW435563.1|CW435563 fsbb001f151m11k0 Sorghum methylation... 303 3e-080
gb|CX608930.1|CX608930 ANR1_9_D06.g1_A002 Anaerobic roots S... 295 8e-078
gb|CD232318.1|CD232318 SS1_39_E09.g1_A012 Salt-stressed see... 240 4e-061
gb|CD213280.1|CD213280 HS1_29_B09.g1_A012 Heat-shocked seed... 228 2e-057
gb|CX611279.1|CX611279 ANR1_23_E12.g1_A002 Anaerobic roots ... 228 2e-057
gb|CN149937.1|CN149937 WOUND1_65_G12.g1_A002 Wounded leaves... 167 5e-039
gb|CW448607.1|CW448607 fsbb001f182e24k0 Sorghum methylation... 141 3e-031
gb|CF074455.1|CF074455 FE1_24_A11.g1_A002 Iron-deficient se... 141 3e-031
gb|AW563989.1|AW563989 LG1_281_D10.b1_A002 Light Grown 1 (L... 113 6e-023
gb|CW036402.1|CW036402 104_267_10503738_114_30374 Sorghum m... 111 3e-022
gb|CW096979.1|CW096979 104_462_11002200_116_34349_082 Sorgh... 111 3e-022
gb|CW096980.1|CW096980 104_462_11002200_148_34353_082 Sorgh... 111 3e-022
gb|CW454158.1|CW454158 fsbb001f198h17k0 Sorghum methylation... 109 1e-021
gb|CL151120.1|CL151120 104_333_10779023_116_31360_191 Sorgh... 103 6e-020
gb|CW103828.1|CW103828 104_472_11012098_148_34437_037 Sorgh... 103 6e-020
gb|CD428558.1|CD428558 ETH1_27_H11.g1_A002 Ethylene-treated... 101 2e-019
gb|CN124270.1|CN124270 RHOH1_3_E09.g1_A002 Acid- and alkali... 100 1e-018
gb|CW036403.1|CW036403 104_267_10503738_115_30375 Sorghum m... 98 4e-018
gb|CW103827.1|CW103827 104_472_11012098_116_34433_037 Sorgh... 98 4e-018
gb|CW119829.1|CW119829 104_497_11108982_148_34645_031 Sorgh... 98 4e-018
gb|CW251032.1|CW251032 104_713_11223710_116_35063_055 Sorgh... 98 4e-018
gb|CD232235.1|CD232235 SS1_39_E09.b1_A012 Salt-stressed see... 98 4e-018
gb|CF074366.1|CF074366 FE1_24_A11.b1_A002 Iron-deficient se... 98 4e-018
gb|CN124196.1|CN124196 RHOH1_3_E09.b1_A002 Acid- and alkali... 98 4e-018
gb|CX608850.1|CX608850 ANR1_9_D06.b1_A002 Anaerobic roots S... 98 4e-018
gb|CX611203.1|CX611203 ANR1_23_E12.b1_A002 Anaerobic roots ... 98 4e-018
gb|BG273523.1|BG273523 OV2_26_G06.b1_A002 Ovary 2 (OV2) Sor... 96 2e-017
gb|CD226168.1|CD226168 CCC1_44_D06.b1_A007 Callus culture/c... 90 9e-016
gb|CW202832.1|CW202832 104_629_11185306_116_36915_043 Sorgh... 86 1e-014
gb|CW193287.1|CW193287 104_616_11179485_148_36782_095 Sorgh... 84 6e-014
gb|CD213181.1|CD213181 HS1_29_B09.b1_A012 Heat-shocked seed... 82 2e-013
gb|CL150110.1|CL150110 104_331_10778290_114_31355_226 Sorgh... 80 9e-013
gb|CW131835.1|CW131835 104_514_11115886_116_34787_081 Sorgh... 80 9e-013
gb|CW180395.1|CW180395 104_594_11160615_148_36632_050 Sorgh... 80 9e-013
gb|CW119828.1|CW119828 104_497_11108982_116_34641_031 Sorgh... 72 2e-010
gb|AF470066.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 72 2e-010
gb|CW202833.1|CW202833 104_629_11185306_148_37061_043 Sorgh... 70 9e-010
gb|BZ336394.1|BZ336394 hz34a02.g1 WGS-SbicolorF (JM107 adap... 68 3e-009
gb|CW300014.1|CW300014 104_783_11463423_148_36246_060 Sorgh... 68 3e-009
gb|CW480519.1|CW480519 fsbb001f239k04f0 Sorghum methylation... 68 3e-009
gb|CW487349.1|CW487349 fsbb001f253c15k0 Sorghum methylation... 68 3e-009
gb|CW251033.1|CW251033 104_713_11223710_148_35059_055 Sorgh... 66 1e-008
gb|CW448606.1|CW448606 fsbb001f182e24f0 Sorghum methylation... 66 1e-008
gb|CW454157.1|CW454157 fsbb001f198h17f0 Sorghum methylation... 66 1e-008
gb|CD462462.1|CD462462 ETH1_37_D07.g1_A002 Ethylene-treated... 66 1e-008
gb|CW092858.1|CW092858 104_455_10999423_116_33051_022 Sorgh... 64 5e-008
gb|CW136797.1|CW136797 104_521_11118569_148_34842_065 Sorgh... 62 2e-007
gb|CW372021.1|CW372021 fsbb001f047l20f0 Sorghum methylation... 62 2e-007
gb|CW396674.1|CW396674 fsbb001f085d16f0 Sorghum methylation... 62 2e-007
gb|AF474131.1| Sorghum bicolor typical P-type R2R3 Myb prot... 62 2e-007
gb|BZ345658.1|BZ345658 hs87e07.b1 WGS-SbicolorF (JM107 adap... 60 8e-007
gb|CW128322.1|CW128322 104_509_11113940_116_34745_066 Sorgh... 56 1e-005
gb|CW257715.1|CW257715 104_723_11227485_116_35160_091 Sorgh... 56 1e-005
gb|CW317106.1|CW317106 104_808_11473239_116_35853_052 Sorgh... 56 1e-005
gb|CW364381.1|CW364381 fsbb001f036g09k0 Sorghum methylation... 56 1e-005
gb|CW378977.1|CW378977 fsbb001f057p23k0 Sorghum methylation... 56 1e-005
gb|CW140879.1|CW140879 104_531_11136014_116_34925_053 Sorgh... 54 5e-005
gb|CW148312.1|CW148312 104_542_11140354_116_35003_033 Sorgh... 54 5e-005
gb|CN138550.1|CN138550 OX1_64_A08.g1_A002 Oxidatively-stres... 54 5e-005
gb|AF474130.1| Sorghum bicolor typical P-type R2R3 Myb prot... 54 5e-005
gb|AF474133.1| Sorghum bicolor typical P-type R2R3 Myb prot... 54 5e-005
gb|CW140880.1|CW140880 104_531_11136014_148_34921_053 Sorgh... 52 2e-004
gb|CW154932.1|CW154932 104_557_11145867_116_36359_012 Sorgh... 52 2e-004
gb|CW166340.1|CW166340 104_575_11153002_116_36764_045 Sorgh... 52 2e-004
gb|CW217449.1|CW217449 104_650_11195661_148_37134_085 Sorgh... 52 2e-004
gb|CW276952.1|CW276952 104_750_11405764_148_35399_002 Sorgh... 52 2e-004
gb|CW338064.1|CW338064 104_838_11484544_116_36125_060 Sorgh... 52 2e-004
gb|CW338065.1|CW338065 104_838_11484544_148_36124_060 Sorgh... 52 2e-004
gb|CW172349.1|CW172349 104_583_11156244_148_36539_040 Sorgh... 48 0.003
gb|CW180394.1|CW180394 104_594_11160615_116_36636_050 Sorgh... 48 0.003
gb|CW256513.1|CW256513 104_721_11226833_148_35142_069 Sorgh... 48 0.003
gb|CW366211.1|CW366211 fsbb001f039b18f0 Sorghum methylation... 48 0.003
gb|CW373042.1|CW373042 fsbb001f049d12k0 Sorghum methylation... 48 0.003
gb|CW403563.1|CW403563 fsbb001f095f12f0 Sorghum methylation... 48 0.003
gb|CW041910.1|CW041910 104_275_10506824_115_30285 Sorghum m... 46 0.013
gb|CW065792.1|CW065792 104_312_10523339_115_30130 Sorghum m... 46 0.013
gb|CW215467.1|CW215467 104_647_11194554_116_37464_067 Sorgh... 46 0.013
gb|CW235373.1|CW235373 104_690_11214948_116_37410_038 Sorgh... 46 0.013
gb|CW269199.1|CW269199 104_740_11401724_116_36231_076 Sorgh... 46 0.013
gb|CW269200.1|CW269200 104_740_11401724_148_36232_076 Sorgh... 46 0.013
gb|CW344541.1|CW344541 104_847_11488007_148_36198_092 Sorgh... 46 0.013
gb|CW377165.1|CW377165 fsbb001f055f22f0 Sorghum methylation... 46 0.013
gb|CW419529.1|CW419529 fsbb001f124g17k0 Sorghum methylation... 46 0.013
gb|CX608115.1|CX608115 ANR1_32_F03.g1_A002 Anaerobic roots ... 46 0.013
gb|CX611399.1|CX611399 ANR1_24_A06.g1_A002 Anaerobic roots ... 46 0.013
gb|CW258078.1|CW258078 104_723_11227682_116_35159_001 Sorgh... 44 0.049
gb|CW310980.1|CW310980 104_800_11469995_148_35755_042 Sorgh... 44 0.049
gb|BG104097.1|BG104097 RHIZ2_40_E04.b1_A003 Rhizome2 (RHIZ2... 44 0.049
gb|CD235285.1|CD235285 SS1_28_H11.g1_A012 Salt-stressed see... 44 0.049
gb|CX616786.1|CX616786 GABR1_29_H12.g1_A002 GA- or brassino... 44 0.049
gb|CW087483.1|CW087483 104_432_10947659_114_32550_046 Sorgh... 42 0.20
gb|CW099615.1|CW099615 104_466_11003648_116_34383_022 Sorgh... 42 0.20
gb|CW167237.1|CW167237 104_576_11153492_116_36486_074 Sorgh... 42 0.20
gb|CW422256.1|CW422256 fsbb001f131h06k0 Sorghum methylation... 42 0.20
gb|CW045801.1|CW045801 104_282_10509787_114_30228 Sorghum m... 40 0.77
gb|CW066615.1|CW066615 104_313_10523776_114_30148 Sorghum m... 40 0.77
gb|CW266637.1|CW266637 104_736_11232538_148_35286_039 Sorgh... 40 0.77
gb|CW310158.1|CW310158 104_799_11469571_116_37434_076 Sorgh... 40 0.77
gb|CW449861.1|CW449861 fsbb001f188d08k0 Sorghum methylation... 40 0.77
gb|CW454633.1|CW454633 fsbb001f199c24k0 Sorghum methylation... 40 0.77
gb|AY363131.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 40 0.77
gb|CL157642.1|CL157642 104_345_10783745_114_31477_305 Sorgh... 38 3.1
gb|CL157643.1|CL157643 104_345_10783745_116_31478_305 Sorgh... 38 3.1
gb|CW039028.1|CW039028 104_271_10505257_114_30387 Sorghum m... 38 3.1
gb|CW044723.1|CW044723 104_280_10509121_114_30262 Sorghum m... 38 3.1
gb|CW062461.1|CW062461 104_307_10521353_1_30043 Sorghum met... 38 3.1
gb|CW125548.1|CW125548 104_505_11112386_148_34710_001 Sorgh... 38 3.1
gb|CW154933.1|CW154933 104_557_11145867_148_36360_012 Sorgh... 38 3.1
gb|CW212940.1|CW212940 104_644_11191287_116_37030_060 Sorgh... 38 3.1
gb|CW217448.1|CW217448 104_650_11195661_116_37133_085 Sorgh... 38 3.1
gb|CW247183.1|CW247183 104_708_11221657_116_36081_013 Sorgh... 38 3.1
gb|CW258488.1|CW258488 104_724_11227903_116_35164_026 Sorgh... 38 3.1
gb|CW308697.1|CW308697 104_797_11468806_116_35720_091 Sorgh... 38 3.1
gb|CW316832.1|CW316832 104_808_11473099_148_35857_074 Sorgh... 38 3.1
gb|CW324222.1|CW324222 104_818_11477041_148_35906_003 Sorgh... 38 3.1
gb|CW363913.1|CW363913 fsbb001f035l18f0 Sorghum methylation... 38 3.1
gb|CW363914.1|CW363914 fsbb001f035l18k0 Sorghum methylation... 38 3.1
gb|CW377249.1|CW377249 fsbb001f055h19f0 Sorghum methylation... 38 3.1
gb|CW377250.1|CW377250 fsbb001f055h19k0 Sorghum methylation... 38 3.1
gb|CW477238.1|CW477238 fsbb001f234h18k0 Sorghum methylation... 38 3.1
gb|AW285644.1|AW285644 LG1_319_E08.g1_A002 Light Grown 1 (L... 38 3.1
gb|CX613908.1|CX613908 GABR1_10_H03.g1_A002 GA- or brassino... 38 3.1
gb|CX614961.1|CX614961 GABR1_17_G10.b1_A002 GA- or brassino... 38 3.1
gb|CX615050.1|CX615050 GABR1_17_G10.g1_A002 GA- or brassino... 38 3.1
gb|CX622870.1|CX622870 GABR1_66_A07.g1_A002 GA- or brassino... 38 3.1
gb|AF474126.1| Sorghum bicolor typical P-type R2R3 Myb prot... 38 3.1
>gb|AW672062.1|AW672062 LG1_354_G05.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 601
Score = 944 bits (476), Expect = 0.0
Identities = 567/597 (94%), Gaps = 4/597 (0%)
Strand = Plus / Plus
Query: 195 attccgcagacctgtaagctctgtgagtttggttggagctcccaggttctgcattgcgtt 254
||||| ||| |||||||||||||||| ||||| ||||| ||||||||||||||| ||
Sbjct: 9 attccacaggcctgtaagctctgtgaatttgg----agctctcaggttctgcattgcatt 64
Query: 255 gagatggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggtcccct 314
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 65 gagatggggaggcattcttgctgctacaagcaaaagttgagaaaggggctctggtcccct 124
Query: 315 gaggaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggagctct 374
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 125 gaggaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggagttct 184
Query: 375 gttcccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctgaggtggataaac 434
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 185 gttcccaaactcgctgggctccaaagatgcggaaagagttgtaggctgaggtggataaac 244
Query: 435 tatctgaggccagacctcaagagaggggcattcgcccaagacgaagaagacctcatcatc 494
||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 245 tatctgaggccagacctcaagagaggggcattctcccaagacgaagaagagctcatcatt 304
Query: 495 gagctgcacgctgtcctcgggaacaggtggtctcaaattgcagcgcagctgccagggagg 554
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 305 gagctgcacgctgtcctcggaaacaggtggtctcaaattgcagcacagctgccagggagg 364
Query: 555 actgataatgagatcaagaatctatggaactcgtgcatcaagaagaagctgaggcagaaa 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 actgataatgagatcaagaatctatggaactcgtgcatcaagaagaagctgaggcagaaa 424
Query: 615 ggcattgatcccaacacccacaagccacttactgaggctgatcacggcggtgcagctccc 674
|||||||||||||||||||||||||| |||||||||||||||| | |||| |||||||||
Sbjct: 425 ggcattgatcccaacacccacaagccccttactgaggctgatcgcagcggagcagctccc 484
Query: 675 accatcagcaccgagagaacctcagggtccagcgacatcaacccatcaagcactggtcct 734
||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||
Sbjct: 485 accgtcagcaccgagagaacctcagggtccagcgatgtcaacccatcaagtgctggtgct 544
Query: 735 ctggggaacttgagccccctcctcagcgagacggctcaatcatcaatgctgatgccc 791
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ctggggaacttgagccacctcctcagcgagacggctcaatcatcaatgctgatgccc 601
>gb|CN139844.1|CN139844 OX1_24_B03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_B03_A002 5', mRNA sequence
Length = 745
Score = 892 bits (450), Expect = 0.0
Identities = 541/571 (94%), Gaps = 4/571 (0%)
Strand = Plus / Plus
Query: 190 tatacattccgcagacctgtaagctctgtgagtttggttggagctcccaggttctgcatt 249
|||||||||| ||| |||||||||||||||| ||||| ||||| |||||||||||||
Sbjct: 179 tatacattccacaggcctgtaagctctgtgaatttgg----agctctcaggttctgcatt 234
Query: 250 gcgttgagatggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggt 309
|| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 235 gcattgagatggggaggcattcttgctgctacaagcaaaagttgagaaaggggctctggt 294
Query: 310 cccctgaggaggatgagaaactcatgaatcacataacaaagcatggccatggctgctgga 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 cccctgaggaggatgagaaactcatgaatcacataacaaagcatggccatggctgctgga 354
Query: 370 gctctgttcccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctgaggtgga 429
| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 355 gttctgttcccaaactcgctgggctccaaagatgcggaaagagttgtaggctgaggtgga 414
Query: 430 taaactatctgaggccagacctcaagagaggggcattcgcccaagacgaagaagacctca 489
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 415 taaactatctgaggccagacctcaagagaggggcattctcccaagacgaagaagagctca 474
Query: 490 tcatcgagctgcacgctgtcctcgggaacaggtggtctcaaattgcagcgcagctgccag 549
|||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 475 tcattgagctgcacgctgtcctcggaaacaggtggtctcaaattgcagcacagctgccag 534
Query: 550 ggaggactgataatgagatcaagaatctatggaactcgtgcatcaagaagaagctgaggc 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ggaggactgataatgagatcaagaatctatggaactcgtgcatcaagaagaagctgaggc 594
Query: 610 agaaaggcattgatcccaacacccacaagccacttactgaggctgatcacggcggtgcag 669
||||||||||||||||||||||||||||||| |||||||||||||||| | |||| ||||
Sbjct: 595 agaaaggcattgatcccaacacccacaagccccttactgaggctgatcgcagcggagcag 654
Query: 670 ctcccaccatcagcaccgagagaacctcagggtccagcgacatcaacccatcaagcactg 729
|||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 655 ctcccaccgtcagcaccgagagaacctcagggtccagcgatgtcaacccatcaagtgctg 714
Query: 730 gtcctctggggaacttgagccccctcctcag 760
|| |||||||||||||||||| |||||||||
Sbjct: 715 gtgctctggggaacttgagccacctcctcag 745
Score = 101 bits (51), Expect = 2e-019
Identities = 90/103 (87%)
Strand = Plus / Plus
Query: 24 gaaatctcctatctgcagccatgcagttgctcaatcctggcctcagatgaagcccaacca 83
||||||||||||||||| || |||||||||||||| || ||||||| |||||||||| ||
Sbjct: 1 gaaatctcctatctgcaaccgtgcagttgctcaattctagcctcagctgaagcccaatca 60
Query: 84 ttcattggtatataagtcgctacaacctttgcaatttcccact 126
| || ||||||||||| || ||| |||||||||||||||||
Sbjct: 61 tccagtggtatataagctacttcaaactttgcaatttcccact 103
>gb|BI098957.1|BI098957 IP1_35_D12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 556
Score = 848 bits (428), Expect = 0.0
Identities = 518/548 (94%)
Strand = Plus / Plus
Query: 450 ctcaagagaggggcattcgcccaagacgaagaagacctcatcatcgagctgcacgctgtc 509
|||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||
Sbjct: 9 ctcaagagaggggcattctcccaagacgaagaagagctcatcattgagctgcacgctgtc 68
Query: 510 ctcgggaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatc 569
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 69 ctcggaaacaggtggtctcaaattgcagcacagctgccagggaggactgataatgagatc 128
Query: 570 aagaatctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaac 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 aagaatctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaac 188
Query: 630 acccacaagccacttactgaggctgatcacggcggtgcagctcccaccatcagcaccgag 689
||||||||||| |||||||||||||||| | |||| |||||||||||| |||||||||||
Sbjct: 189 acccacaagccccttactgaggctgatcgcagcggagcagctcccaccgtcagcaccgag 248
Query: 690 agaacctcagggtccagcgacatcaacccatcaagcactggtcctctggggaacttgagc 749
|||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||
Sbjct: 249 agaacctcagggtccagcgatgtcaacccatcaagtgctggtgctctggggaacttgagc 308
Query: 750 cccctcctcagcgagacggctcaatcatcaatgctgatgcccgtgtacgacaagaatcgt 809
| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 309 cacctcctcagcgagacggctcaatcatcaatgctgatgcccatgtatgacaagaatcgc 368
Query: 810 gctgaaacaccaaacttggcacgccctaagctgccaccaaaggagctgttcctggagcag 869
||||||| || |||||||||||||||||| |||||||||| ||| ||||||||||||||
Sbjct: 369 actgaaactccgaacttggcacgccctaaggtgccaccaaaagagttgttcctggagcag 428
Query: 870 cttactgctggacacgagagtccatcaacctgccactcatcaggccaaactctctatttc 929
|||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 429 cttactgctggacacgagagtccatcaacctgccgctcatcaggccagactctctatttc 488
Query: 930 cctttccaacagcccttaggctacaacagtgagagtggcagcagcgatggggcgaatatg 989
|||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 489 cctttccaacagcctttaggctacaacagtgagagtggcagtggcgatggggcgaatatg 548
Query: 990 aattcact 997
||||||||
Sbjct: 549 aattcact 556
>gb|BF655998.1|BF655998 FM1_42_F08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 507
Score = 737 bits (372), Expect = 0.0
Identities = 438/460 (95%)
Strand = Plus / Plus
Query: 330 ctcatgaatcacataacaaagcatggccatggctgctggagctctgttcccaaactcgct 389
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 9 ctcatgaatcacataacaaagcatggccatggctgctggagttctgttcccaaactcgct 68
Query: 390 gggcttcaaaggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagac 449
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gggctccaaagatgcggaaagagttgtaggctgaggtggataaactatctgaggccagac 128
Query: 450 ctcaagagaggggcattcgcccaagacgaagaagacctcatcatcgagctgcacgctgtc 509
|||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||
Sbjct: 129 ctcaagagaggggcattctcccaagacgaagaagagctcatcattgagctgcacgctgtc 188
Query: 510 ctcgggaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatc 569
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 189 ctcggaaacaggtggtctcaaattgcagcacagctgccagggaggactgataatgagatc 248
Query: 570 aagaatctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaac 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aagaatctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaac 308
Query: 630 acccacaagccacttactgaggctgatcacggcggtgcagctcccaccatcagcaccgag 689
||||||||||| |||||||||||||||| | |||| |||||||||||| ||| |||||||
Sbjct: 309 acccacaagccccttactgaggctgatcgcagcggagcagctcccaccgtcaccaccgag 368
Query: 690 agaacctcagggtccagcgacatcaacccatcaagcactggtcctctggggaacttgagc 749
|||||||||||||||||||| ||||||||| ||| ||||| |||||||||||||||||
Sbjct: 369 agaacctcagggtccagcgatgtcaacccatgaagtgctggtgctctggggaacttgagc 428
Query: 750 cccctcctcagcgagacggctcaatcatcaatgctgatgc 789
| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 429 caccttctcagcgagacggctcaatcatcaatgctgatgc 468
>gb|BI074901.1|BI074901 IP1_17_C12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 625
Score = 724 bits (365), Expect = 0.0
Identities = 515/557 (92%), Gaps = 11/557 (1%)
Strand = Plus / Plus
Query: 1442 gttccagaatcagcagccacagcaacagctgcaggtagcaccagacatgtatgacaagga 1501
|||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 3 gttccagaatcagcagacacagcaacagctgcaggctgcacccaacatgtatgacaagga 62
Query: 1502 cttgcaaagaatgcaactatcttttgagaatatctaggcattatgttccaccacatggaa 1561
|||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 63 cttgcaaagaatgcaactgtcttttgagaatatctaggcactatgttccacctcatggaa 122
Query: 1562 cagagcagatcagaagaagcagaaactcgtattttcagagattcgtgggcagaattatgc 1621
|||||| |||||| ||||||||||||| ||||| |||||||| ||||| |||| |||||
Sbjct: 123 cagagctgatcagcagaagcagaaacttgtatt--cagagatttgtgggaagaactatgc 180
Query: 1622 tgaattgctcacatagatacgttaagttgatacagaaatcatcctccacagctgttcctc 1681
||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 181 tgaattgcttacatagatacattaagttgatacagaaattatcctccacagctgttcctc 240
Query: 1682 agttgaagagctggcaatatcaaggaaaggacagccctggcattagaagttgcagcagga 1741
||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 241 agttgaagacctggcaatatcaaggaaaggacagccctggcattagaagtggcagcagaa 300
Query: 1742 tgcataggaaagtatgttctagagtctcc-tttcctttctcttgaaaattgatgttttcc 1800
||||||| |||||| |||||||||||||| ||| |||||||||||||||||||| |||||
Sbjct: 301 tgcatagaaaagtacgttctagagtctcctttttctttctcttgaaaattgatg-tttcc 359
Query: 1801 ttctgtac---acgactgaacttttgcatatttgagtttttgtt--ctctctggtggaaa 1855
|||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 360 ttctgtacacgacgactcaacttttgcatatttgagtttttgttcactctctggtggaaa 419
Query: 1856 ttaaataaatatagatagccataggcaaaaatgcatgtgtcggtagctctcaacgtgcaa 1915
||||||||||||||| |||||| ||||||| ||||||||||||||||||||| | |||||
Sbjct: 420 ttaaataaatatagacagccatgggcaaaattgcatgtgtcggtagctctcaccatgcaa 479
Query: 1916 gtagccccaaac-tttcaactgctgccatgcatgtccatgcaaattaattattgcatgtt 1974
| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 480 gcagccccaaacttttcaactgctgccatgcacgtccatgcaaattaattattgcatgtt 539
Query: 1975 gtatttttcatttcttt 1991
||| |||||||||||||
Sbjct: 540 gta-ttttcatttcttt 555
>gb|BI098521.1|BI098521 IP1_33_D12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 518
Score = 603 bits (304), Expect = e-170
Identities = 436/472 (92%), Gaps = 11/472 (2%)
Strand = Plus / Plus
Query: 1527 gagaatatctaggcattatgttccaccacatggaacagagcagatcagaagaagcagaaa 1586
||||||||||||||| ||||||||||| ||||||||||||| |||||| |||||||||||
Sbjct: 1 gagaatatctaggcactatgttccacctcatggaacagagctgatcagcagaagcagaaa 60
Query: 1587 ctcgtattttcagagattcgtgggcagaattatgctgaattgctcacatagatacgttaa 1646
|| ||||| |||||||| ||||| |||| |||||||||||||| |||||||||| ||||
Sbjct: 61 cttgtatt--cagagatttgtgggaagaactatgctgaattgcttacatagatacattaa 118
Query: 1647 gttgatacagaaatcatcctccacagctgttcctcagttgaagagctggcaatatcaagg 1706
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 119 gttgatacagaaattatcctccacagctgttcctcagttgaagacctggcaatatcaagg 178
Query: 1707 aaaggacagccctggcattagaagttgcagcaggatgcataggaaagtatgttctagagt 1766
||||||||||||||||||||||||| ||||||| |||||||| |||||| ||||||||||
Sbjct: 179 aaaggacagccctggcattagaagtggcagcagaatgcatagaaaagtacgttctagagt 238
Query: 1767 ctcc-tttcctttctcttgaaaattgatgttttccttctgtac---acgactgaactttt 1822
|||| ||| |||||||||||||||||||| ||||||||||||| |||||| |||||||
Sbjct: 239 ctcctttttctttctcttgaaaattgatg-tttccttctgtacacgacgactcaactttt 297
Query: 1823 gcatatttgagtttttgtt--ctctctggtggaaattaaataaatatagatagccatagg 1880
||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||
Sbjct: 298 gcatatttgagtttttgttcactctctggtggaaattaaataaatatagacagccatggg 357
Query: 1881 caaaaatgcatgtgtcggtagctctcaacgtgcaagtagccccaaac-tttcaactgctg 1939
||||| ||||||||||||||||||||| | |||||| |||||||||| ||||||||||||
Sbjct: 358 caaaattgcatgtgtcggtagctctcaccatgcaagcagccccaaacttttcaactgctg 417
Query: 1940 ccatgcatgtccatgcaaattaattattgcatgttgtatttttcatttcttt 1991
||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 418 ccatgcacgtccatgcaaattaattattgcatgttgta-ttttcatttcttt 468
>gb|BI075197.1|BI075197 IP1_17_C12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 638
Score = 587 bits (296), Expect = e-165
Identities = 395/427 (92%), Gaps = 2/427 (0%)
Strand = Plus / Plus
Query: 1336 cctttgccgaaacgaccacagtcatgcagaaccagagccaaacgctttatgatgatgtga 1395
|||||||||| |||||||||| |||||||||||||||||| ||||| |||||||| ||||
Sbjct: 214 cctttgccgagacgaccacagccatgcagaaccagagccagacgctctatgatgacgtga 273
Query: 1396 tcaaggcagagagccaattcaacatagaagggatatgtgcttcttggttccagaatcagc 1455
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 274 tcaaggcagagagccaattcagcatggaagggatatgtgcttcttggttccagaatcagc 333
Query: 1456 agccacagcaacagctgcaggtagcaccagacatgtatgacaaggacttgcaaagaatgc 1515
|| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 334 agacacagcaacagctgcaggctgcacccaacatgtatgacaaggacttgcaaagaatgc 393
Query: 1516 aactatcttttgagaatatctaggcattatgttccaccacatggaacagagcagatcaga 1575
|||| ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||
Sbjct: 394 aactgtcttttgagaatatctaggcactatgttccacctcatggaacagagctgatcagc 453
Query: 1576 agaagcagaaactcgtattttcagagattcgtgggcagaattatgctgaattgctcacat 1635
||||||||||||| ||| |||||||||| ||||| |||| |||||||||||||| ||||
Sbjct: 454 agaagcagaaacttgta--ttcagagatttgtgggaagaactatgctgaattgcttacat 511
Query: 1636 agatacgttaagttgatacagaaatcatcctccacagctgttcctcagttgaagagctgg 1695
|||||| ||||||||||||||| || ||||||||||||||||||||||||||||| ||||
Sbjct: 512 agatacattaagttgatacagagattatcctccacagctgttcctcagttgaagacctgg 571
Query: 1696 caatatcaaggaaaggacagccctggcattagaagttgcagcaggatgcataggaaagta 1755
|||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||
Sbjct: 572 caatatcaaggaaaggacagccctggcattagaagtggcagcagaatgcatagaaaagta 631
Query: 1756 tgttcta 1762
||||||
Sbjct: 632 cgttcta 638
Score = 335 bits (169), Expect = 9e-090
Identities = 187/193 (96%)
Strand = Plus / Plus
Query: 1143 gtagattcattctactgggatggtactaatcctagcagcagtagcagtactgggagcaga 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gtagattcattctactgggatggtactaatcctagcagcagtagcagtactgggagcaga 68
Query: 1203 gggagcaacagtatgggatttgaaccacagagcacgagcacaattctggagaacagtgtc 1262
|| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 69 ggaagcaacagtatgggctttgaaccacagagcacgagctcaattctggagaacagtgtc 128
Query: 1263 ttcccatggacagacattggacaagaaaaagatacaagggctcacctagtagcggaactt 1322
|||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 129 ttcccatggacaaacatcggacaagaaaaagatacaagggctcacctagtagaggaactt 188
Query: 1323 aagtggcctgact 1335
|||||||||||||
Sbjct: 189 aagtggcctgact 201
>gb|BF655926.1|BF655926 FM1_42_F08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 536
Score = 583 bits (294), Expect = e-164
Identities = 420/454 (92%), Gaps = 11/454 (2%)
Strand = Plus / Plus
Query: 1545 tgttccaccacatggaacagagcagatcagaagaagcagaaactcgtattttcagagatt 1604
||||||||| ||||||||||||| |||||| ||||||||||||| ||||| ||||||||
Sbjct: 1 tgttccacctcatggaacagagctgatcagcagaagcagaaacttgtatt--cagagatt 58
Query: 1605 cgtgggcagaattatgctgaattgctcacatagatacgttaagttgatacagaaatcatc 1664
||||| |||| |||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 59 tgtgggaagaactatgctgaattgcttacatagatacattaagttgatacagaaatcatc 118
Query: 1665 ctccacagctgttcctcagttgaagagctggcaatatcaaggaaaggacagccctggcat 1724
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 119 ctccacagctgttcctcagttgaagacctggcaatatcaaggaaaggacagccctggcat 178
Query: 1725 tagaagttgcagcaggatgcataggaaagtatgttctagagtctcc-tttcctttctctt 1783
||||||| ||||||| |||||||| |||||| |||||||||||||| ||| |||||||||
Sbjct: 179 tagaagtggcagcagaatgcatagaaaagtacgttctagagtctcctttttctttctctt 238
Query: 1784 gaaaattgatgttttccttctgtac---acgactgaacttttgcatatttgagtttttgt 1840
||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 239 gaaaattgatg-tttccttctgtacacgacgactcaacttttgcatatttgagtttttgt 297
Query: 1841 t--ctctctggtggaaattaaataaatatagatagccataggcaaaaatgcatgtgtcgg 1898
| ||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||
Sbjct: 298 tcactctctggtggaaattaaataaatatagacagccatgggcaaaattgcatgtgtcgg 357
Query: 1899 tagctctcaacgtgcaagtagccccaaac-tttcaactgctgccatgcatgtccatgcaa 1957
||||||||| | |||||| |||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 358 tagctctcaccatgcaagcagccccaaacttttcaactgctgccatgcacgtccatgcaa 417
Query: 1958 attaattattgcatgttgtatttttcatttcttt 1991
|||||||||||||||||||| |||||||||||||
Sbjct: 418 attaattattgcatgttgta-ttttcatttcttt 450
>gb|BI098805.1|BI098805 IP1_33_D12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 387
Score = 561 bits (283), Expect = e-158
Identities = 355/379 (93%)
Strand = Plus / Plus
Query: 450 ctcaagagaggggcattcgcccaagacgaagaagacctcatcatcgagctgcacgctgtc 509
|||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||
Sbjct: 9 ctcaagagaggggcattctcccaagacgaagaagagctcatcattgagctgcacgctgtc 68
Query: 510 ctcgggaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatc 569
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 69 ctcggaaacaggtggtctcaaattgcagcacagctgccagggaggactgataatgagatc 128
Query: 570 aagaatctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaac 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 aagaatctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaac 188
Query: 630 acccacaagccacttactgaggctgatcacggcggtgcagctcccaccatcagcaccgag 689
||||||||||| |||||||||||||||| | |||| |||||||||||| |||||||||||
Sbjct: 189 acccacaagccccttactgaggctgatcgcagcggagcagctcccaccgtcagcaccgag 248
Query: 690 agaacctcagggtccagcgacatcaacccatcaagcactggtcctctggggaacttgagc 749
|||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||
Sbjct: 249 agaacctcagggtccagcgatgtcaacccatcaagtgctggtgctctggggaacttgagc 308
Query: 750 cccctcctcagcgagacggctcaatcatcaatgctgatgcccgtgtacgacaagaatcgt 809
| |||||||||||||||||||||||||||||||||||||||| |||| || |||||||
Sbjct: 309 cacctcctcagcgagacggctcaatcatcaatgctgatgcccatgtatgagcagaatcgc 368
Query: 810 gctgaaacaccaaacttgg 828
||||||| || |||||||
Sbjct: 369 actgaaactccgaacttgg 387
>gb|BI098588.1|BI098588 IP1_34_D01.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 414
Score = 486 bits (245), Expect = e-135
Identities = 341/366 (93%), Gaps = 9/366 (2%)
Strand = Plus / Plus
Query: 1633 catagatacgttaagttgatacagaaatcatcctccacagctgttcctcagttgaagagc 1692
||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 1 catagatacattaagttgatacagaaattatcctccacagctgttcctcagttgaagacc 60
Query: 1693 tggcaatatcaaggaaaggacagccctggcattagaagttgcagcaggatgcataggaaa 1752
||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||
Sbjct: 61 tggcaatatcaaggaaaggacagccctggcattagaagtggcagcagaatgcatagaaaa 120
Query: 1753 gtatgttctagagtctcc-tttcctttctcttgaaaattgatgttttccttctgtac--- 1808
||| |||||||||||||| ||| |||||||||||||||||||| |||||||||||||
Sbjct: 121 gtacgttctagagtctcctttttctttctcttgaaaattgatg-tttccttctgtacacg 179
Query: 1809 acgactgaacttttgcatatttgagtttttgtt--ctctctggtggaaattaaataaata 1866
|||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 180 acgactcaacttttgcatatttgagtttttgttcactctctggtggaaattaaataaata 239
Query: 1867 tagatagccataggcaaaaatgcatgtgtcggtagctctcaacgtgcaagtagccccaaa 1926
|||| |||||| ||||||| ||||||||||||||||||||| | |||||| |||||||||
Sbjct: 240 tagacagccatgggcaaaattgcatgtgtcggtagctctcaccatgcaagcagccccaaa 299
Query: 1927 c-tttcaactgctgccatgcatgtccatgcaaattaattattgcatgttgtatttttcat 1985
| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 300 cttttcaactgctgccatgcacgtccatgcaaattaattattgcatgttgta-ttttcat 358
Query: 1986 ttcttt 1991
||||||
Sbjct: 359 ttcttt 364
>gb|BI098670.1|BI098670 IP1_35_D12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 427
Score = 472 bits (238), Expect = e-131
Identities = 349/379 (92%), Gaps = 9/379 (2%)
Strand = Plus / Plus
Query: 1620 gctgaattgctcacatagatacgttaagttgatacagaaatcatcctccacagctgttcc 1679
||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 1 gctgaattgcttacatagatacattaagttgatacagaaattatcctccacagctgttcc 60
Query: 1680 tcagttgaagagctggcaatatcaaggaaaggacagccctggcattagaagttgcagcag 1739
||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 61 tcagttgaagacctggcaatatcaaggaaaggacagccctggcattagaagtggcagcag 120
Query: 1740 gatgcataggaaagtatgttctagagtctcc-tttcctttctcttgaaaattgatgtttt 1798
|||||||| ||||| |||||||||||||| ||| |||||||| ||||||||||| |||
Sbjct: 121 aatgcatagaaaagtgcgttctagagtctcctttttctttctctggaaaattgatg-ttt 179
Query: 1799 ccttctgtac---acgactgaacttttgcatatttgagtttttgtt--ctctctggtgga 1853
|||||||||| | |||| |||||| ||||||||||||||||||| ||||||||||||
Sbjct: 180 ccttctgtacaggaggactcaactttggcatatttgagtttttgttcactctctggtgga 239
Query: 1854 aattaaataaatatagatagccataggcaaaaatgcatgtgtcggtagctctcaacgtgc 1913
||||||||||||||||| |||||| ||||||| ||||||||||||||||||||| | |||
Sbjct: 240 aattaaataaatatagacagccatgggcaaaattgcatgtgtcggtagctctcaccatgc 299
Query: 1914 aagtagccccaaac-tttcaactgctgccatgcatgtccatgcaaattaattattgcatg 1972
||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 300 aagcagccccaaacttttcaactgctgccatgcacgtccatgcaaattaattattgcatg 359
Query: 1973 ttgtatttttcatttcttt 1991
||||| |||||||||||||
Sbjct: 360 ttgta-ttttcatttcttt 377
>gb|BG050179.1|BG050179 FM1_67_F11.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 464
Score = 400 bits (202), Expect = e-109
Identities = 245/259 (94%), Gaps = 4/259 (1%)
Strand = Plus / Plus
Query: 190 tatacattccgcagacctgtaagctctgtgagtttggttggagctcccaggttctgcatt 249
|||||||||| ||| |||||||||||||||| ||||| ||||| |||||||||||||
Sbjct: 210 tatacattccacaggcctgtaagctctgtgaatttgg----agctctcaggttctgcatt 265
Query: 250 gcgttgagatggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggt 309
|| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 266 gcattgagatggggaggcattcttgctgctacaagcaaaagttgagaaaggggctctggt 325
Query: 310 cccctgaggaggatgagaaactcatgaatcacataacaaagcatggccatggctgctgga 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 cccctgaggaggatgagaaactcatgaatcacataacaaagcatggccatggctgctgga 385
Query: 370 gctctgttcccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctgaggtgga 429
| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 386 gttctgttcccaaactcgctgggctccaaagatgcggaaagagttgtaggctgaggtgga 445
Query: 430 taaactatctgaggccaga 448
|||||||||||||||||||
Sbjct: 446 taaactatctgaggccaga 464
Score = 131 bits (66), Expect = 3e-028
Identities = 108/122 (88%)
Strand = Plus / Plus
Query: 5 cctttccttgctttccactgaaatctcctatctgcagccatgcagttgctcaatcctggc 64
|||||||||||| ||||||||||||||||||||||| || |||||||||||||| || ||
Sbjct: 13 cctttccttgctctccactgaaatctcctatctgcaaccgtgcagttgctcaattctagc 72
Query: 65 ctcagatgaagcccaaccattcattggtatataagtcgctacaacctttgcaatttccca 124
||||| |||||||||| ||| || ||||||||||| || ||| |||||||||||||||
Sbjct: 73 ctcagctgaagcccaatcatccagtggtatataagctacttcaaactttgcaatttccca 132
Query: 125 ct 126
||
Sbjct: 133 ct 134
>gb|BI098875.1|BI098875 IP1_34_D01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 249
Score = 398 bits (201), Expect = e-109
Identities = 231/241 (95%)
Strand = Plus / Plus
Query: 450 ctcaagagaggggcattcgcccaagacgaagaagacctcatcatcgagctgcacgctgtc 509
|||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||
Sbjct: 9 ctcaagagaggggcattctcccaagacgaagaagagctcatcattgagctgcacgctgtc 68
Query: 510 ctcgggaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatc 569
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 69 ctcggaaacaggtggtctcaaattgcagcacagctgccagggaggactgataatgagatc 128
Query: 570 aagaatctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaac 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 aagaatctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaac 188
Query: 630 acccacaagccacttactgaggctgatcacggcggtgcagctcccaccatcagcaccgag 689
||||||||||| |||||||||||||||| | |||| |||||||||||| |||||||||||
Sbjct: 189 acccacaagccccttactgaggctgatcgcagcggagcagctcccaccgtcagcaccgag 248
Query: 690 a 690
|
Sbjct: 249 a 249
>gb|DN551956.1|DN551956 pSPR-RT-MR-H2_G12_S202 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 575
Score = 325 bits (164), Expect = 9e-087
Identities = 389/456 (85%), Gaps = 11/456 (2%)
Strand = Plus / Minus
Query: 1543 tatgttccaccacatggaacagagcagatcagaagaagcagaaactcgtattttcagaga 1602
||||||||||| |||| ||||| || |||||| ||||||||| ||| ||||| || |||
Sbjct: 573 tatgttccacctcatgtaacagggctgatcagcagaagcagacacttgtatt--caaaga 516
Query: 1603 ttcgtgggcagaattatgctgaattgctcacatagatacgttaagttgatacagaaatca 1662
|| ||||| |||| || ||||||||||| ||||| |||| |||||| || ||||||||||
Sbjct: 515 tttgtgggaagaactacgctgaattgcttacataaatacattaagtcgacacagaaatca 456
Query: 1663 tcctccacagctgttcctcagttgaagagctggcaatatcaaggaaaggacagccctggc 1722
|||||||||||||||| ||||| ||||| ||||||||||||||||||||||||| |||||
Sbjct: 455 tcctccacagctgttcgtcagtggaagacctggcaatatcaaggaaaggacagctctggc 396
Query: 1723 attagaagttgcagcaggatgcataggaaagtatgttctagagtctcc-tttcctttctc 1781
|||||| || ||||||| | |||||| |||||| || ||||||||||| ||| |||||||
Sbjct: 395 attagatgtggcagcagcaggcatagaaaagtacgtcctagagtctcctttttctttctc 336
Query: 1782 ttgaaaattgatgttttccttctgtac---acgactgaacttttgcatatttgagttttt 1838
||||||||||||| ||||||| ||||| |||||| || ||| |||||| ||||||||
Sbjct: 335 ttgaaaattgatg-tttccttatgtacacgacgactcaaatttagcatataggagttttt 277
Query: 1839 gttctctct--ggtggaaattaaataaatatagatagccataggcaaaaatgcatgtgtc 1896
|||| || | ||||||||| ||| || ||||| |||||| || |||| | ||||||||
Sbjct: 276 gttcactgtgaggtggaaatcaaacgaagatagacagccatggggaaaatttcatgtgtc 217
Query: 1897 ggtagctctcaacgtgcaagtagccccaaac-tttcaactgctgccatgcatgtccatgc 1955
||||||||||| | ||||| |||||||||| ||| ||| ||| ||||||| ||| ||||
Sbjct: 216 ggtagctctcaccacgcaagcagccccaaacttttgaacggctaccatgcacgtcgatgc 157
Query: 1956 aaattaattattgcatgttgtatttttcatttcttt 1991
||||||||||| |||||||||| |||||||||||||
Sbjct: 156 aaattaattatggcatgttgta-ttttcatttcttt 122
>gb|CD226268.1|CD226268 CCC1_44_D06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_44_D06_A007 5', mRNA sequence
Length = 665
Score = 313 bits (158), Expect = 3e-083
Identities = 376/449 (83%)
Strand = Plus / Plus
Query: 258 atggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgag 317
||||||||||| || ||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 176 atggggaggcactcctgctgttacaagcagaagctgaggaaggggctctggtctcctgag 235
Query: 318 gaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggagctctgtt 377
|| |||||||| |||||||| |||||||| ||||| || ||||||||||||||| ||||
Sbjct: 236 gaagatgagaagctcatgaaccacataaccaagcacgggcatggctgctggagcactgtc 295
Query: 378 cccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctgaggtggataaactat 437
|| || || || |||||||| ||||| || ||||| || ||||||||||||||||| ||
Sbjct: 296 ccgaagcttgcagggcttcagaggtgtggcaagagctgcaggctgaggtggataaattac 355
Query: 438 ctgaggccagacctcaagagaggggcattcgcccaagacgaagaagacctcatcatcgag 497
|||||||| ||||| || ||||| |||||| | || || ||||||||||| ||||| ||
Sbjct: 356 ctgaggcctgaccttaaaagaggtgcattctctcaggaggaagaagaccttatcattgaa 415
Query: 498 ctgcacgctgtcctcgggaacaggtggtctcaaattgcagcgcagctgccagggaggact 557
|| || ||||| || || |||||||||||||| |||||| | | |||| || || |||
Sbjct: 416 cttcatgctgtactgggaaacaggtggtctcagattgcaacaaggttgcctggaagaact 475
Query: 558 gataatgagatcaagaatctatggaactcgtgcatcaagaagaagctgaggcagaaaggc 617
||||| ||||| |||||||| |||||||| |||||||||||||||| |||||||||||
Sbjct: 476 gataacgagattaagaatctctggaactcaagcatcaagaagaagctccggcagaaaggc 535
Query: 618 attgatcccaacacccacaagccacttactgaggctgatcacggcggtgcagctcccacc 677
|| || ||||||||||||||||| ||| | |||| ||| ||| || ||||| |||||
Sbjct: 536 atcgaccccaacacccacaagccccttgccgaggttgaacacagcanagcagcgcccaca 595
Query: 678 atcagcaccgagagaacctcagggtccag 706
||||| || ||||||||||| | ||||||
Sbjct: 596 atcagtactgagagaacctctgagtccag 624
>gb|CW435563.1|CW435563 fsbb001f151m11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f151m11, DNA
sequence
Length = 450
Score = 303 bits (153), Expect = 3e-080
Identities = 190/202 (94%), Gaps = 4/202 (1%)
Strand = Plus / Minus
Query: 190 tatacattccgcagacctgtaagctctgtgagtttggttggagctcccaggttctgcatt 249
|||||||||| ||| |||||||||||||||| ||||| ||||| |||||||||||||
Sbjct: 253 tatacattccacaggcctgtaagctctgtgaatttgg----agctctcaggttctgcatt 198
Query: 250 gcgttgagatggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggt 309
|| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 197 gcattgagatggggaggcattcttgctgctacaagcaaaagttgagaaaggggctctggt 138
Query: 310 cccctgaggaggatgagaaactcatgaatcacataacaaagcatggccatggctgctgga 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 cccctgaggaggatgagaaactcatgaatcacataacaaagcatggccatggctgctgga 78
Query: 370 gctctgttcccaaactcgctgg 391
| ||||||||||||||||||||
Sbjct: 77 gttctgttcccaaactcgctgg 56
Score = 131 bits (66), Expect = 3e-028
Identities = 108/122 (88%)
Strand = Plus / Minus
Query: 5 cctttccttgctttccactgaaatctcctatctgcagccatgcagttgctcaatcctggc 64
|||||||||||| ||||||||||||||||||||||| || |||||||||||||| || ||
Sbjct: 450 cctttccttgctctccactgaaatctcctatctgcaaccgtgcagttgctcaattctagc 391
Query: 65 ctcagatgaagcccaaccattcattggtatataagtcgctacaacctttgcaatttccca 124
||||| |||||||||| ||| || ||||||||||| || ||| |||||||||||||||
Sbjct: 390 ctcagctgaagcccaatcatccagtggtatataagctacttcaaactttgcaatttccca 331
Query: 125 ct 126
||
Sbjct: 330 ct 329
>gb|CX608930.1|CX608930 ANR1_9_D06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_9_D06_A002 5', mRNA sequence
Length = 831
Score = 295 bits (149), Expect = 8e-078
Identities = 374/449 (83%)
Strand = Plus / Plus
Query: 258 atggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgag 317
||||||||||| || ||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 268 atggggaggcactcctgctgttacaagcagaagctgaggaaggggctctggtctcctgag 327
Query: 318 gaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggagctctgtt 377
|| |||||||| |||||||| |||||||| ||||| || ||||||||||||||| ||||
Sbjct: 328 gaagatgagaagctcatgaaccacataaccaagcacgggcatggctgctggagcactgtc 387
Query: 378 cccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctgaggtggataaactat 437
|| || || || |||||||| ||||| || ||||| || ||||||||||||||||| ||
Sbjct: 388 ccgaagcttgcagggcttcagaggtgtggcaagagctgcaggctgaggtggataaattac 447
Query: 438 ctgaggccagacctcaagagaggggcattcgcccaagacgaagaagacctcatcatcgag 497
|||||||| ||||| || ||||| |||||| | || || ||||||||||| ||||| ||
Sbjct: 448 ctgaggcctgaccttaaaagaggtgcattctctcaggaggaagaagaccttatcattgaa 507
Query: 498 ctgcacgctgtcctcgggaacaggtggtctcaaattgcagcgcagctgccagggaggact 557
|| || ||||| || || |||||||||||||| |||||| | | |||| || || |||
Sbjct: 508 cttcatgctgtactgggaaacaggtggtctcagattgcaacaaggttgcctggaagaact 567
Query: 558 gataatgagatcaagaatctatggaactcgtgcatcaagaagaagctgaggcagaaaggc 617
||||| ||||| |||||||| |||||||| |||||||||||||||| |||||| ||||
Sbjct: 568 gataacgagattaagaatctctggaactcaagcatcaagaagaagctccggcagagaggc 627
Query: 618 attgatcccaacacccacaagccacttactgaggctgatcacggcggtgcagctcccacc 677
|| || ||||||||||||||||| ||| | |||| ||| ||| || ||||| || ||
Sbjct: 628 atcgaccccaacacccacaagccccttgccgaggttgaacacagcaaagcagcgccaaca 687
Query: 678 atcagcaccgagagaacctcagggtccag 706
||||| || ||||||||||| | ||||||
Sbjct: 688 atcagtactgagagaacctctgagtccag 716
>gb|CD232318.1|CD232318 SS1_39_E09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_39_E09_A012 5', mRNA sequence
Length = 615
Score = 240 bits (121), Expect = 4e-061
Identities = 277/329 (84%)
Strand = Plus / Plus
Query: 258 atggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgag 317
||||||||||| || ||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 285 atggggaggcactcctgctgttacaagcagaagctgaggaaggggctctggtctcctgag 344
Query: 318 gaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggagctctgtt 377
|| |||||||| |||||||| |||||||| ||||| || ||||||||||||||| ||||
Sbjct: 345 gaagatgagaagctcatgaaccacataaccaagcacgggcatggctgctggagcactgtc 404
Query: 378 cccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctgaggtggataaactat 437
|| || || || |||||||| ||||| || ||||| || ||||||||||||||||| ||
Sbjct: 405 ccgaagcttgcagggcttcagaggtgtggcaagagctgcaggctgaggtggataaattac 464
Query: 438 ctgaggccagacctcaagagaggggcattcgcccaagacgaagaagacctcatcatcgag 497
|||||||| ||||| || ||||| |||||| | || || ||||||||||| ||||| ||
Sbjct: 465 ctgaggcctgaccttaaaagaggtgcattctctcaggaggaagaagaccttatcattgaa 524
Query: 498 ctgcacgctgtcctcgggaacaggtggtctcaaattgcagcgcagctgccagggaggact 557
|| || ||||| || || |||||||||||||| |||||| | | |||| || || |||
Sbjct: 525 cttcatgctgtactgggaaacaggtggtctcagattgcaacaaggttgcctggaagaact 584
Query: 558 gataatgagatcaagaatctatggaactc 586
||||| ||||| |||||||| ||||||||
Sbjct: 585 gataacgagattaagaatctctggaactc 613
>gb|CD213280.1|CD213280 HS1_29_B09.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_29_B09_A012 5', mRNA sequence
Length = 580
Score = 228 bits (115), Expect = 2e-057
Identities = 238/279 (85%)
Strand = Plus / Plus
Query: 258 atggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgag 317
||||||||||| || ||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 287 atggggaggcactcctgctgttacaagcagaagctgaggaaggggctctggtctcctgag 346
Query: 318 gaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggagctctgtt 377
|| |||||||| |||||||| |||||||| ||||| || ||||||||||||||| ||||
Sbjct: 347 gaagatgagaagctcatgaaccacataaccaagcacgggcatggctgctggagcactgtc 406
Query: 378 cccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctgaggtggataaactat 437
|| || || || |||||||| ||||| || ||||| || ||||||||||||||||| ||
Sbjct: 407 ccgaagcttgcagggcttcagaggtgtggcaagagctgcaggctgaggtggataaattac 466
Query: 438 ctgaggccagacctcaagagaggggcattcgcccaagacgaagaagacctcatcatcgag 497
|||||||| ||||| || ||||| |||||| | || || ||||||||||| ||||| ||
Sbjct: 467 ctgaggcctgaccttaaaagaggtgcattctctcaggaggaagaagaccttatcattgaa 526
Query: 498 ctgcacgctgtcctcgggaacaggtggtctcaaattgca 536
|| || ||||| || || |||||||||||||| ||||||
Sbjct: 527 cttcatgctgtactgggaaacaggtggtctcagattgca 565
>gb|CX611279.1|CX611279 ANR1_23_E12.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_23_E12_A002 5', mRNA sequence
Length = 591
Score = 228 bits (115), Expect = 2e-057
Identities = 274/327 (83%)
Strand = Plus / Plus
Query: 258 atggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgag 317
||||||||||| || ||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 265 atggggaggcactcctgctgttacaagcagaagctgaggaaggggctctggtctcctgag 324
Query: 318 gaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggagctctgtt 377
|| |||||||| |||||||| ||||| || ||||| || ||||||||||||||| ||||
Sbjct: 325 gaagatgagaagctcatgaaccacatgaccaagcacgggcatggctgctggagcactgtc 384
Query: 378 cccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctgaggtggataaactat 437
|| || || || |||||||| ||||| || ||||| || ||||||||||||||||| ||
Sbjct: 385 ccgaagcttgcagggcttcagaggtgtggcaagagctgcaggctgaggtggataaattac 444
Query: 438 ctgaggccagacctcaagagaggggcattcgcccaagacgaagaagacctcatcatcgag 497
|||||||| ||||| || ||||| |||||| | || || ||||||||||| ||||| ||
Sbjct: 445 ctgaggcctgaccttaaaagaggtgcattctctcaggaggaagaagaccttatcattgaa 504
Query: 498 ctgcacgctgtcctcgggaacaggtggtctcaaattgcagcgcagctgccagggaggact 557
|| || ||||| || || |||||||||||||| |||||| | | |||| || || |||
Sbjct: 505 cttcatgctgtactgggaaacaggtggtctcagattgcaacaaggttgcctggaagaact 564
Query: 558 gataatgagatcaagaatctatggaac 584
||||| ||||| |||||||| ||||||
Sbjct: 565 gataacgagattaagaatctctggaac 591
>gb|CN149937.1|CN149937 WOUND1_65_G12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_65_G12_A002 5', mRNA sequence
Length = 748
Score = 167 bits (84), Expect = 5e-039
Identities = 267/328 (81%)
Strand = Plus / Plus
Query: 273 tgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactc 332
|||||| ||||| |||||||||| | |||||||||||||| |||||||| ||||| |||
Sbjct: 169 tgctgccacaagaagaagctgaggagagggctctggtcccccgaggaggacgagaagctc 228
Query: 333 atgaatcacataacaaagcatggccatggctgctggagctctgttcccaaactcgctggg 392
||||| ||||| | || | |||||||||||||||||||| || ||||| || || ||
Sbjct: 229 atgaaccacattgcccagtacggccatggctgctggagctcagtgcccaagcttgcagga 288
Query: 393 cttcaaaggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctc 452
|| | ||||| || ||||| || |||||||||||||||||||| |||||||||||||||
Sbjct: 289 ctcgagaggtgtggcaagagctgcaggctgaggtggataaactacctgaggccagacctc 348
Query: 453 aagagaggggcattcgcccaagacgaagaagacctcatcatcgagctgcacgctgtcctc 512
||||| || ||||| | ||||| || || ||||||||||| | || ||| | | ||
Sbjct: 349 aagaggggaacattctcacaagaggaggaggacctcatcatacacctccactccttgctg 408
Query: 513 gggaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaag 572
|| |||| ||||||||| ||||| ||||||||||| || |||| || || ||| |||||
Sbjct: 409 ggaaacaagtggtctcagattgcggcgcagctgcctggccggacggacaacgaggtcaag 468
Query: 573 aatctatggaactcgtgcatcaagaaga 600
|| | |||||||||| |||||||||||
Sbjct: 469 aacttttggaactcgtacatcaagaaga 496
>gb|CW448607.1|CW448607 fsbb001f182e24k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f182e24, DNA
sequence
Length = 806
Score = 141 bits (71), Expect = 3e-031
Identities = 107/119 (89%)
Strand = Plus / Plus
Query: 258 atggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgag 317
||||||||||| || ||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 71 atggggaggcactcctgctgttacaagcagaagctgaggaaggggctctggtctcctgag 130
Query: 318 gaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggagctctgt 376
|| |||||||| |||||||| |||||||| ||||| || ||||||||||||||| ||||
Sbjct: 131 gaagatgagaagctcatgaaccacataaccaagcacgggcatggctgctggagcactgt 189
Score = 111 bits (56), Expect = 3e-022
Identities = 158/192 (82%)
Strand = Plus / Plus
Query: 515 gaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaa 574
||||||||||||||| |||||| | | |||| || || |||||||| ||||| |||||
Sbjct: 545 gaacaggtggtctcagattgcaacaaggttgcctggaagaactgataacgagattaagaa 604
Query: 575 tctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacaccca 634
||| |||||||| |||||||||||||||| ||||||||||||| || |||||||||||
Sbjct: 605 tctctggaactcaagcatcaagaagaagctccggcagaaaggcatcgaccccaacaccca 664
Query: 635 caagccacttactgaggctgatcacggcggtgcagctcccaccatcagcaccgagagaac 694
|||||| ||| | |||| ||| ||| || ||||| || || ||||| || ||||||||
Sbjct: 665 caagccccttgccgaggttgaacacagcaaagcagcgccaacaatcagtactgagagaac 724
Query: 695 ctcagggtccag 706
||| | ||||||
Sbjct: 725 ctctgagtccag 736
Score = 81.8 bits (41), Expect = 2e-013
Identities = 110/133 (82%)
Strand = Plus / Plus
Query: 390 gggcttcaaaggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagac 449
|||||||| ||||| || ||||| || ||||||||||||||||| || |||||||| |||
Sbjct: 328 gggcttcagaggtgtggcaagagctgcaggctgaggtggataaattacctgaggcctgac 387
Query: 450 ctcaagagaggggcattcgcccaagacgaagaagacctcatcatcgagctgcacgctgtc 509
|| || ||||| |||||| | || || ||||||||||| ||||| || || || |||||
Sbjct: 388 cttaaaagaggtgcattctctcaggaggaagaagaccttatcattgaacttcatgctgta 447
Query: 510 ctcgggaacaggt 522
|| || |||||||
Sbjct: 448 ctgggaaacaggt 460
>gb|CF074455.1|CF074455 FE1_24_A11.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_24_A11_A002 5', mRNA sequence
Length = 691
Score = 141 bits (71), Expect = 3e-031
Identities = 107/119 (89%)
Strand = Plus / Plus
Query: 258 atggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgag 317
||||||||||| || ||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 221 atggggaggcactcctgctgttacaagcagaagctgaggaaggggctctggtctcctgag 280
Query: 318 gaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggagctctgt 376
|| |||||||| |||||||| |||||||| ||||| || ||||||||||||||| ||||
Sbjct: 281 gaagatgagaagctcatgaaccacataaccaagcacgggcatggctgctggagcactgt 339
Score = 83.8 bits (42), Expect = 6e-014
Identities = 110/133 (82%)
Strand = Plus / Plus
Query: 390 gggcttcaaaggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagac 449
|||||||| ||||| || ||||| || ||||||||||||||||| || |||||||| |||
Sbjct: 478 gggcttcagaggtgtggcaagagctgcaggctgaggtggataaattacctgaggcctgac 537
Query: 450 ctcaagagaggggcattcgcccaagacgaagaagacctcatcatcgagctgcacgctgtc 509
|| || ||||| |||||| | || || ||||||||||| ||||| || || || |||||
Sbjct: 538 cttaaaagaggtgcattctctcaggaggaagaagaccttatcattgaacttcatgctgta 597
Query: 510 ctcgggaacaggt 522
|| || |||||||
Sbjct: 598 ctgggnaacaggt 610
>gb|AW563989.1|AW563989 LG1_281_D10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 523
Score = 113 bits (57), Expect = 6e-023
Identities = 204/253 (80%)
Strand = Plus / Plus
Query: 352 atggccatggctgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaaga 411
||||||||||||||||||| || || ||||| || || || || | ||||| || ||||
Sbjct: 37 atggccatggctgctggagttccgtccccaagctagcaggtctagagaggtgtgggaaga 96
Query: 412 gttgtaggctgaggtggataaactatctgaggccagacctcaagagaggggcattcgccc 471
| || |||||||||||||| ||||| |||||||| ||||||||||| || |||||| | |
Sbjct: 97 gctgcaggctgaggtggatcaactacctgaggccggacctcaagaggggagcattctcgc 156
Query: 472 aagacgaagaagacctcatcatcgagctgcacgctgtcctcgggaacaggtggtctcaaa 531
| || || || |||||||||||| | || || | | | || |||| ||||||||| |
Sbjct: 157 aggaagaggaggacctcatcatccatctccattccatgatgggcaacaagtggtctcaga 216
Query: 532 ttgcagcgcagctgccagggaggactgataatgagatcaagaatctatggaactcgtgca 591
||||| |||||||||| ||| |||| || || ||| ||||||| | |||||||||| ||
Sbjct: 217 ttgcaacgcagctgccggggcggacggacaacgaggtcaagaacttctggaactcgtaca 276
Query: 592 tcaagaagaagct 604
|||||||||||||
Sbjct: 277 tcaagaagaagct 289
>gb|CW036402.1|CW036402 104_267_10503738_114_30374 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10503738, DNA
sequence
Length = 759
Score = 111 bits (56), Expect = 3e-022
Identities = 158/192 (82%)
Strand = Plus / Plus
Query: 515 gaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaa 574
||||||||||||||| |||||| | | |||| || || |||||||| ||||| |||||
Sbjct: 143 gaacaggtggtctcagattgcaacaaggttgcctggaagaactgataacgagattaagaa 202
Query: 575 tctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacaccca 634
||| |||||||| |||||||||||||||| ||||||||||||| || |||||||||||
Sbjct: 203 tctctggaactcaagcatcaagaagaagctccggcagaaaggcatcgaccccaacaccca 262
Query: 635 caagccacttactgaggctgatcacggcggtgcagctcccaccatcagcaccgagagaac 694
|||||| ||| | |||| ||| ||| || ||||| || || ||||| || ||||||||
Sbjct: 263 caagccccttgccgaggttgaacacagcaaagcagcgccaacaatcagtactgagagaac 322
Query: 695 ctcagggtccag 706
||| | ||||||
Sbjct: 323 ctctgagtccag 334
Score = 50.1 bits (25), Expect = 8e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1024 gcagcacaatttctacagtgatgccgccagtttcaccatcggccctctctacatcaa 1080
||||||| ||||| || |||||||| |||||||||||||| | ||||| |||||||
Sbjct: 652 gcagcaccatttccaccgtgatgccaccagtttcaccatcaactctctcaacatcaa 708
>gb|CW096979.1|CW096979 104_462_11002200_116_34349_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002200, DNA
sequence
Length = 565
Score = 111 bits (56), Expect = 3e-022
Identities = 158/192 (82%)
Strand = Plus / Minus
Query: 515 gaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaa 574
||||||||||||||| |||||| | | |||| || || |||||||| ||||| |||||
Sbjct: 398 gaacaggtggtctcagattgcaacaaggttgcctggaagaactgataacgagattaagaa 339
Query: 575 tctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacaccca 634
||| |||||||| |||||||||||||||| ||||||||||||| || |||||||||||
Sbjct: 338 tctctggaactcaagcatcaagaagaagctccggcagaaaggcatcgaccccaacaccca 279
Query: 635 caagccacttactgaggctgatcacggcggtgcagctcccaccatcagcaccgagagaac 694
|||||| ||| | |||| ||| ||| || ||||| || || ||||| || ||||||||
Sbjct: 278 caagccccttgccgaggttgaacacagcaaagcagcgccaacaatcagtactgagagaac 219
Query: 695 ctcagggtccag 706
||| | ||||||
Sbjct: 218 ctctgagtccag 207
Score = 38.2 bits (19), Expect = 3.1
Identities = 67/83 (80%)
Strand = Plus / Minus
Query: 440 gaggccagacctcaagagaggggcattcgcccaagacgaagaagacctcatcatcgagct 499
|||||| ||||| || ||||| |||||| | || || ||||||||||| ||||| || ||
Sbjct: 565 gaggcctgaccttaaaagaggtgcattctctcaggaggaagaagaccttatcattgaact 506
Query: 500 gcacgctgtcctcgggaacaggt 522
|| ||||| || || |||||||
Sbjct: 505 tcatgctgtactgggaaacaggt 483
>gb|CW096980.1|CW096980 104_462_11002200_148_34353_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002200, DNA
sequence
Length = 672
Score = 111 bits (56), Expect = 3e-022
Identities = 158/192 (82%)
Strand = Plus / Plus
Query: 515 gaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaa 574
||||||||||||||| |||||| | | |||| || || |||||||| ||||| |||||
Sbjct: 353 gaacaggtggtctcagattgcaacaaggttgcctggaagaactgataacgagattaagaa 412
Query: 575 tctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacaccca 634
||| |||||||| |||||||||||||||| ||||||||||||| || |||||||||||
Sbjct: 413 tctctggaactcaagcatcaagaagaagctccggcagaaaggcatcgaccccaacaccca 472
Query: 635 caagccacttactgaggctgatcacggcggtgcagctcccaccatcagcaccgagagaac 694
|||||| ||| | |||| ||| ||| || ||||| || || ||||| || ||||||||
Sbjct: 473 caagccccttgccgaggttgaacacagcaaagcagcgccaacaatcagtactgagagaac 532
Query: 695 ctcagggtccag 706
||| | ||||||
Sbjct: 533 ctctgagtccag 544
Score = 81.8 bits (41), Expect = 2e-013
Identities = 110/133 (82%)
Strand = Plus / Plus
Query: 390 gggcttcaaaggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagac 449
|||||||| ||||| || ||||| || ||||||||||||||||| || |||||||| |||
Sbjct: 136 gggcttcagaggtgtggcaagagctgcaggctgaggtggataaattacctgaggcctgac 195
Query: 450 ctcaagagaggggcattcgcccaagacgaagaagacctcatcatcgagctgcacgctgtc 509
|| || ||||| |||||| | || || ||||||||||| ||||| || || || |||||
Sbjct: 196 cttaaaagaggtgcattctctcaggaggaagaagaccttatcattgaacttcatgctgta 255
Query: 510 ctcgggaacaggt 522
|| || |||||||
Sbjct: 256 ctgggaaacaggt 268
>gb|CW454158.1|CW454158 fsbb001f198h17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f198h17, DNA
sequence
Length = 617
Score = 109 bits (55), Expect = 1e-021
Identities = 151/183 (82%)
Strand = Plus / Plus
Query: 515 gaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaa 574
||||||||||||||| |||||| | | |||| || || |||||||| ||||| |||||
Sbjct: 375 gaacaggtggtctcagattgcaacaaggttgcctggaagaactgataacgagattaagaa 434
Query: 575 tctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacaccca 634
||| |||||||| |||||||||||||||| ||||||||||||| || |||||||||||
Sbjct: 435 tctctggaactcaagcatcaagaagaagctccggcagaaaggcatcgaccccaacaccca 494
Query: 635 caagccacttactgaggctgatcacggcggtgcagctcccaccatcagcaccgagagaac 694
|||||| ||| | |||| ||| ||| || ||||| || || ||||| || ||||||||
Sbjct: 495 caagccccttgccgaggttgaacacagcaaagcagcgccaacaatcagtactgagagaac 554
Query: 695 ctc 697
|||
Sbjct: 555 ctc 557
Score = 81.8 bits (41), Expect = 2e-013
Identities = 110/133 (82%)
Strand = Plus / Plus
Query: 390 gggcttcaaaggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagac 449
|||||||| ||||| || ||||| || ||||||||||||||||| || |||||||| |||
Sbjct: 158 gggcttcagaggtgtggcaagagctgcaggctgaggtggataaattacctgaggcctgac 217
Query: 450 ctcaagagaggggcattcgcccaagacgaagaagacctcatcatcgagctgcacgctgtc 509
|| || ||||| |||||| | || || ||||||||||| ||||| || || || |||||
Sbjct: 218 cttaaaagaggtgcattctctcaggaggaagaagaccttatcattgaacttcatgctgta 277
Query: 510 ctcgggaacaggt 522
|| || |||||||
Sbjct: 278 ctgggaaacaggt 290
>gb|CL151120.1|CL151120 104_333_10779023_116_31360_191 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779023, DNA
sequence
Length = 714
Score = 103 bits (52), Expect = 6e-020
Identities = 127/152 (83%)
Strand = Plus / Plus
Query: 555 actgataatgagatcaagaatctatggaactcgtgcatcaagaagaagctgaggcagaaa 614
|||||||| ||||| |||||||| |||||||| |||||||||||||||| ||||||||
Sbjct: 6 actgataacgagattaagaatctctggaactcaagcatcaagaagaagctccggcagaaa 65
Query: 615 ggcattgatcccaacacccacaagccacttactgaggctgatcacggcggtgcagctccc 674
||||| || ||||||||||||||||| ||| | |||| ||| ||| || ||||| ||
Sbjct: 66 ggcatcgaccccaacacccacaagccccttgccgaggttgaacacagcaaagcagcgcca 125
Query: 675 accatcagcaccgagagaacctcagggtccag 706
|| ||||| || ||||||||||| | ||||||
Sbjct: 126 acaatcagtactgagagaacctctgagtccag 157
Score = 58.0 bits (29), Expect = 3e-006
Identities = 86/105 (81%)
Strand = Plus / Plus
Query: 1168 ctaatcctagcagcagtagcagtactgggagcagagggagcaacagtatgggatttgaac 1227
|||||||||||||||| ||||||| || ||||| || |||||||| |||||||||| |
Sbjct: 610 ctaatcctagcagcagcagcagtagaggaagcagcggaagcaacagcttgggatttgagc 669
Query: 1228 cacagagcacgagcacaattctggagaacagtgtcttcccatgga 1272
|| ||||| ||| || ||||||| | ||||| ||||||||||
Sbjct: 670 ggcaaagcacaagctcacttctggaaagtagtgttttcccatgga 714
Score = 50.1 bits (25), Expect = 8e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1024 gcagcacaatttctacagtgatgccgccagtttcaccatcggccctctctacatcaa 1080
||||||| ||||| || |||||||| |||||||||||||| | ||||| |||||||
Sbjct: 475 gcagcaccatttccaccgtgatgccaccagtttcaccatcaactctctcaacatcaa 531
>gb|CW103828.1|CW103828 104_472_11012098_148_34437_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11012098, DNA
sequence
Length = 623
Score = 103 bits (52), Expect = 6e-020
Identities = 127/152 (83%)
Strand = Plus / Plus
Query: 555 actgataatgagatcaagaatctatggaactcgtgcatcaagaagaagctgaggcagaaa 614
|||||||| ||||| |||||||| |||||||| |||||||||||||||| ||||||||
Sbjct: 30 actgataacgagattaagaatctctggaactcaagcatcaagaagaagctccggcagaaa 89
Query: 615 ggcattgatcccaacacccacaagccacttactgaggctgatcacggcggtgcagctccc 674
||||| || ||||||||||||||||| ||| | |||| ||| ||| || ||||| ||
Sbjct: 90 ggcatcgaccccaacacccacaagccccttgccgaggttgaacacagcaaagcagcgcca 149
Query: 675 accatcagcaccgagagaacctcagggtccag 706
|| ||||| || ||||||||||| | ||||||
Sbjct: 150 acaatcagtactgagagaacctctgagtccag 181
Score = 50.1 bits (25), Expect = 8e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1024 gcagcacaatttctacagtgatgccgccagtttcaccatcggccctctctacatcaa 1080
||||||| ||||| || |||||||| |||||||||||||| | ||||| |||||||
Sbjct: 499 gcagcaccatttccaccgtgatgccaccagtttcaccatcaactctctcaacatcaa 555
>gb|CD428558.1|CD428558 ETH1_27_H11.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_27_H11_A002 5', mRNA sequence
Length = 665
Score = 101 bits (51), Expect = 2e-019
Identities = 204/254 (80%), Gaps = 1/254 (0%)
Strand = Plus / Plus
Query: 352 atggccatggctgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaaga 411
||||||||||||||||||| || || ||||| || || || || | ||||| || ||||
Sbjct: 163 atggccatggctgctggagttccgtccccaagctagcaggtctagagaggtgtgggaaga 222
Query: 412 gttgtaggctgaggtggataaactatctgaggccagacctcaagagaggggcattcgccc 471
| || |||||||||||||| ||||| |||||||| ||||||||||| || |||||| | |
Sbjct: 223 gctgcaggctgaggtggatcaactacctgaggccggacctcaagaggggagcattctcgc 282
Query: 472 aagacgaagaagacctcatcatcgagctgcacgctgtcctcgggaacaggtggtctcaaa 531
| || || || |||||||||||| | || || | | | || |||| ||||||||| |
Sbjct: 283 aggaagaggaggacctcatcatccatctccattccatgatgggcaacaagtggtctcaga 342
Query: 532 ttgcagcgcagctgcc-agggaggactgataatgagatcaagaatctatggaactcgtgc 590
||||| |||||||||| ||| |||| || || ||| ||||||| | |||||||||| |
Sbjct: 343 ttgcaacgcagctgccgngggcggacggacaacgaggtcaagaacttctggaactcgtac 402
Query: 591 atcaagaagaagct 604
||||||||||||||
Sbjct: 403 atcaagaagaagct 416
>gb|CN124270.1|CN124270 RHOH1_3_E09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_3_E09_A002 5', mRNA sequence
Length = 670
Score = 99.6 bits (50), Expect = 1e-018
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 258 atggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgag 317
||||||||||| || ||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 317 atggggaggcactcctgctgttacaagcagaagctgaggaaggggctctggtctcctgag 376
Query: 318 gaggatgagaaact 331
|| |||||||||||
Sbjct: 377 gaagatgagaaact 390
Score = 50.1 bits (25), Expect = 8e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1024 gcagcacaatttctacagtgatgccgccagtttcaccatcggccctctctacatcaa 1080
||||||| ||||| || |||||||| |||||||||||||| | ||||| |||||||
Sbjct: 597 gcagcaccatttccaccgtgatgccaccagtttcaccatcaactctctcaacatcaa 653
>gb|CW036403.1|CW036403 104_267_10503738_115_30375 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10503738, DNA
sequence
Length = 681
Score = 97.6 bits (49), Expect = 4e-018
Identities = 127/153 (83%)
Strand = Plus / Minus
Query: 1389 gatgtgatcaaggcagagagccaattcaacatagaagggatatgtgcttcttggttccag 1448
||||| ||||| || |||||||||||||||||||| || | ||||| | |||| ||
Sbjct: 452 gatgttatcaaagccgagagccaattcaacatagagggcctctgtgcagcctggtctcaa 393
Query: 1449 aatcagcagccacagcaacagctgcaggtagcaccagacatgtatgacaaggacttgcaa 1508
|||| ||||||||||||||| |||||||||| | |||| ||||||||||||| |||||
Sbjct: 392 aatctgcagccacagcaacatctgcaggtagtatcagatttgtatgacaaggatttgcag 333
Query: 1509 agaatgcaactatcttttgagaatatctaggca 1541
|||||| | |||||||||||||||||||||
Sbjct: 332 agaatgtccttgtcttttgagaatatctaggca 300
Score = 58.0 bits (29), Expect = 3e-006
Identities = 86/105 (81%)
Strand = Plus / Minus
Query: 1172 tcctagcagcagtagcagtactgggagcagagggagcaacagtatgggatttgaaccaca 1231
|||||||||||| ||||||| || ||||| || |||||||| |||||||||| | ||
Sbjct: 681 tcctagcagcagcagcagtagaggaagcagcggaagcaacagcttgggatttgagcggca 622
Query: 1232 gagcacgagcacaattctggagaacagtgtcttcccatggacaga 1276
||||| ||| || ||||||| | ||||| ||||||||||||||
Sbjct: 621 aagcacaagctcacttctggaaagtagtgttttcccatggacaga 577
>gb|CW103827.1|CW103827 104_472_11012098_116_34433_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11012098, DNA
sequence
Length = 670
Score = 97.6 bits (49), Expect = 4e-018
Identities = 127/153 (83%)
Strand = Plus / Minus
Query: 1389 gatgtgatcaaggcagagagccaattcaacatagaagggatatgtgcttcttggttccag 1448
||||| ||||| || |||||||||||||||||||| || | ||||| | |||| ||
Sbjct: 612 gatgttatcaaagccgagagccaattcaacatagagggcctctgtgcagcctggtctcaa 553
Query: 1449 aatcagcagccacagcaacagctgcaggtagcaccagacatgtatgacaaggacttgcaa 1508
|||| ||||||||||||||| |||||||||| | |||| ||||||||||||| |||||
Sbjct: 552 aatctgcagccacagcaacatctgcaggtagtatcagatttgtatgacaaggatttgcag 493
Query: 1509 agaatgcaactatcttttgagaatatctaggca 1541
|||||| | |||||||||||||||||||||
Sbjct: 492 agaatgtccttgtcttttgagaatatctaggca 460
>gb|CW119829.1|CW119829 104_497_11108982_148_34645_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11108982, DNA
sequence
Length = 494
Score = 97.6 bits (49), Expect = 4e-018
Identities = 127/153 (83%)
Strand = Plus / Minus
Query: 1389 gatgtgatcaaggcagagagccaattcaacatagaagggatatgtgcttcttggttccag 1448
||||| ||||| || |||||||||||||||||||| || | ||||| | |||| ||
Sbjct: 364 gatgttatcaaagccgagagccaattcaacatagagggcctctgtgcagcctggtctcaa 305
Query: 1449 aatcagcagccacagcaacagctgcaggtagcaccagacatgtatgacaaggacttgcaa 1508
|||| ||||||||||||||| |||||||||| | |||| ||||||||||||| |||||
Sbjct: 304 aatctgcagccacagcaacatctgcaggtagtatcagatttgtatgacaaggatttgcag 245
Query: 1509 agaatgcaactatcttttgagaatatctaggca 1541
|||||| | |||||||||||||||||||||
Sbjct: 244 agaatgtccttgtcttttgagaatatctaggca 212
>gb|CW251032.1|CW251032 104_713_11223710_116_35063_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11223710, DNA
sequence
Length = 588
Score = 97.6 bits (49), Expect = 4e-018
Identities = 127/153 (83%)
Strand = Plus / Minus
Query: 1389 gatgtgatcaaggcagagagccaattcaacatagaagggatatgtgcttcttggttccag 1448
||||| ||||| || |||||||||||||||||||| || | ||||| | |||| ||
Sbjct: 167 gatgttatcaaagccgagagccaattcaacatagagggcctctgtgcagcctggtctcaa 108
Query: 1449 aatcagcagccacagcaacagctgcaggtagcaccagacatgtatgacaaggacttgcaa 1508
|||| ||||||||||||||| |||||||||| | |||| ||||||||||||| |||||
Sbjct: 107 aatctgcagccacagcaacatctgcaggtagtatcagatttgtatgacaaggatttgcag 48
Query: 1509 agaatgcaactatcttttgagaatatctaggca 1541
|||||| | |||||||||||||||||||||
Sbjct: 47 agaatgtccttgtcttttgagaatatctaggca 15
Score = 65.9 bits (33), Expect = 1e-008
Identities = 90/109 (82%)
Strand = Plus / Minus
Query: 1168 ctaatcctagcagcagtagcagtactgggagcagagggagcaacagtatgggatttgaac 1227
|||||||||||||||| ||||||| || ||||| || |||||||| |||||||||| |
Sbjct: 400 ctaatcctagcagcagcagcagtagaggaagcagcggaagcaacagcttgggatttgagc 341
Query: 1228 cacagagcacgagcacaattctggagaacagtgtcttcccatggacaga 1276
|| ||||| ||| || ||||||| | ||||| ||||||||||||||
Sbjct: 340 ggcaaagcacaagctcacttctggaaagtagtgttttcccatggacaga 292
Score = 42.1 bits (21), Expect = 0.20
Identities = 48/57 (84%)
Strand = Plus / Minus
Query: 1024 gcagcacaatttctacagtgatgccgccagtttcaccatcggccctctctacatcaa 1080
||||||| || || || |||||||| |||||||||||||| | ||||| |||||||
Sbjct: 535 gcagcaccatctccaccgtgatgccaccagtttcaccatcaactctctcaacatcaa 479
>gb|CD232235.1|CD232235 SS1_39_E09.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_39_E09_A012 3', mRNA sequence
Length = 608
Score = 97.6 bits (49), Expect = 4e-018
Identities = 127/153 (83%)
Strand = Plus / Plus
Query: 1389 gatgtgatcaaggcagagagccaattcaacatagaagggatatgtgcttcttggttccag 1448
||||| ||||| || |||||||||||||||||||| || | ||||| | |||| ||
Sbjct: 277 gatgttatcaaagccgagagccaattcaacatagagggcctctgtgcagcctggtctcaa 336
Query: 1449 aatcagcagccacagcaacagctgcaggtagcaccagacatgtatgacaaggacttgcaa 1508
|||| ||||||||||||||| |||||||||| | |||| ||||||||||||| |||||
Sbjct: 337 aatctgcagccacagcaacatctgcaggtagtatcagatttgtatgacaaggatttgcag 396
Query: 1509 agaatgcaactatcttttgagaatatctaggca 1541
|||||| | |||||||||||||||||||||
Sbjct: 397 agaatgtccttgtcttttgagaatatctaggca 429
Score = 65.9 bits (33), Expect = 1e-008
Identities = 90/109 (82%)
Strand = Plus / Plus
Query: 1168 ctaatcctagcagcagtagcagtactgggagcagagggagcaacagtatgggatttgaac 1227
|||||||||||||||| ||||||| || ||||| || |||||||| |||||||||| |
Sbjct: 44 ctaatcctagcagcagcagcagtagaggaagcagcggaagcaacagcttgggatttgagc 103
Query: 1228 cacagagcacgagcacaattctggagaacagtgtcttcccatggacaga 1276
|| ||||| ||| || ||||||| | ||||| ||||||||||||||
Sbjct: 104 ggcaaagcacaagctcacttctggaaagtagtgttttcccatggacaga 152
>gb|CF074366.1|CF074366 FE1_24_A11.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_24_A11_A002 3', mRNA sequence
Length = 646
Score = 97.6 bits (49), Expect = 4e-018
Identities = 127/153 (83%)
Strand = Plus / Plus
Query: 1389 gatgtgatcaaggcagagagccaattcaacatagaagggatatgtgcttcttggttccag 1448
||||| ||||| || |||||||||||||||||||| || | ||||| | |||| ||
Sbjct: 151 gatgttatcaaagccgagagccaattcaacatagagggcctctgtgcagcctggtctcaa 210
Query: 1449 aatcagcagccacagcaacagctgcaggtagcaccagacatgtatgacaaggacttgcaa 1508
|||| ||||||||||||||| |||||||||| | |||| ||||||||||||| |||||
Sbjct: 211 aatctgcagccacagcaacatctgcaggtagtatcagatttgtatgacaaggatttgcag 270
Query: 1509 agaatgcaactatcttttgagaatatctaggca 1541
|||||| | |||||||||||||||||||||
Sbjct: 271 agaatgtccttgtcttttgagaatatctaggca 303
>gb|CN124196.1|CN124196 RHOH1_3_E09.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_3_E09_A002 3', mRNA sequence
Length = 763
Score = 97.6 bits (49), Expect = 4e-018
Identities = 127/153 (83%)
Strand = Plus / Plus
Query: 1389 gatgtgatcaaggcagagagccaattcaacatagaagggatatgtgcttcttggttccag 1448
||||| ||||| || |||||||||||||||||||| || | ||||| | |||| ||
Sbjct: 266 gatgttatcaaagccgagagccaattcaacatagagggcctctgtgcagcctggtctcaa 325
Query: 1449 aatcagcagccacagcaacagctgcaggtagcaccagacatgtatgacaaggacttgcaa 1508
|||| ||||||||||||||| |||||||||| | |||| ||||||||||||| |||||
Sbjct: 326 aatctgcagccacagcaacatctgcaggtagtatcagatttgtatgacaaggatttgcag 385
Query: 1509 agaatgcaactatcttttgagaatatctaggca 1541
|||||| | |||||||||||||||||||||
Sbjct: 386 agaatgtccttgtcttttgagaatatctaggca 418
Score = 65.9 bits (33), Expect = 1e-008
Identities = 90/109 (82%)
Strand = Plus / Plus
Query: 1168 ctaatcctagcagcagtagcagtactgggagcagagggagcaacagtatgggatttgaac 1227
|||||||||||||||| ||||||| || ||||| || |||||||| |||||||||| |
Sbjct: 33 ctaatcctagcagcagcagcagtagaggaagcagcggaagcaacagcttgggatttgagc 92
Query: 1228 cacagagcacgagcacaattctggagaacagtgtcttcccatggacaga 1276
|| ||||| ||| || ||||||| | ||||| ||||||||||||||
Sbjct: 93 ggcaaagcacaagctcacttctggaaagtagtgttttcccatggacaga 141
>gb|CX608850.1|CX608850 ANR1_9_D06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_9_D06_A002 3', mRNA sequence
Length = 748
Score = 97.6 bits (49), Expect = 4e-018
Identities = 127/153 (83%)
Strand = Plus / Plus
Query: 1389 gatgtgatcaaggcagagagccaattcaacatagaagggatatgtgcttcttggttccag 1448
||||| ||||| || |||||||||||||||||||| || | ||||| | |||| ||
Sbjct: 227 gatgttatcaaagccgagagccaattcaacatagagggcctctgtgcagcctggtctcaa 286
Query: 1449 aatcagcagccacagcaacagctgcaggtagcaccagacatgtatgacaaggacttgcaa 1508
|||| ||||||||||||||| |||||||||| | |||| ||||||||||||| |||||
Sbjct: 287 aatctgcagccacagcaacatctgcaggtagtatcagatttgtatgacaaggatttgcag 346
Query: 1509 agaatgcaactatcttttgagaatatctaggca 1541
|||||| | |||||||||||||||||||||
Sbjct: 347 agaatgtccttgtcttttgagaatatctaggca 379
Score = 52.0 bits (26), Expect = 2e-004
Identities = 83/102 (81%)
Strand = Plus / Plus
Query: 1175 tagcagcagtagcagtactgggagcagagggagcaacagtatgggatttgaaccacagag 1234
||||||||| ||||||| || ||||| || |||||||| |||||||||| | || ||
Sbjct: 1 tagcagcagcagcagtagaggaagcagcggaagcaacagcttgggatttgagcggcaaag 60
Query: 1235 cacgagcacaattctggagaacagtgtcttcccatggacaga 1276
||| ||| || ||||||| | ||||| ||||||||||||||
Sbjct: 61 cacaagctcacttctggaaagtagtgttttcccatggacaga 102
>gb|CX611203.1|CX611203 ANR1_23_E12.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_23_E12_A002 3', mRNA sequence
Length = 764
Score = 97.6 bits (49), Expect = 4e-018
Identities = 127/153 (83%)
Strand = Plus / Plus
Query: 1389 gatgtgatcaaggcagagagccaattcaacatagaagggatatgtgcttcttggttccag 1448
||||| ||||| || |||||||||||||||||||| || | ||||| | |||| ||
Sbjct: 430 gatgttatcaaagccgagagccaattcaacatagagggcctctgtgcagcctggtctcaa 489
Query: 1449 aatcagcagccacagcaacagctgcaggtagcaccagacatgtatgacaaggacttgcaa 1508
|||| ||||||||||||||| |||||||||| | |||| ||||||||||||| |||||
Sbjct: 490 aatctgcagccacagcaacatctgcaggtagtatcagatttgtatgacaaggatttgcag 549
Query: 1509 agaatgcaactatcttttgagaatatctaggca 1541
|||||| | |||||||||||||||||||||
Sbjct: 550 agaatgtccttgtcttttgagaatatctaggca 582
Score = 65.9 bits (33), Expect = 1e-008
Identities = 90/109 (82%)
Strand = Plus / Plus
Query: 1168 ctaatcctagcagcagtagcagtactgggagcagagggagcaacagtatgggatttgaac 1227
|||||||||||||||| ||||||| || ||||| || |||||||| |||||||||| |
Sbjct: 197 ctaatcctagcagcagcagcagtagaggaagcagcggaagcaacagcttgggatttgagc 256
Query: 1228 cacagagcacgagcacaattctggagaacagtgtcttcccatggacaga 1276
|| ||||| ||| || ||||||| | ||||| ||||||||||||||
Sbjct: 257 ggcaaagcacaagctcacttctggaaagtagtgttttcccatggacaga 305
Score = 50.1 bits (25), Expect = 8e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1024 gcagcacaatttctacagtgatgccgccagtttcaccatcggccctctctacatcaa 1080
||||||| ||||| || |||||||| |||||||||||||| | ||||| |||||||
Sbjct: 62 gcagcaccatttccaccgtgatgccaccagtttcaccatcaactctctcaacatcaa 118
>gb|BG273523.1|BG273523 OV2_26_G06.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 356
Score = 95.6 bits (48), Expect = 2e-017
Identities = 126/152 (82%)
Strand = Plus / Plus
Query: 306 tggtcccctgaggaggatgagaaactcatgaatcacataacaaagcatggccatggctgc 365
||||| || |||||||| ||||| ||||| || |||| || | ||| ||||||||||||
Sbjct: 166 tggtcgccggaggaggacgagaagctcatcaagtacatcaccacgcacggccatggctgc 225
Query: 366 tggagctctgttcccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctgagg 425
|||||||| || |||| || || ||||| || ||||||| ||||| || |||||||||
Sbjct: 226 tggagctcagtccccagacaagcagggctgcagcggtgcggcaagagctgcaggctgagg 285
Query: 426 tggataaactatctgaggccagacctcaagag 457
||||| ||||| |||||||| |||||||||||
Sbjct: 286 tggatcaactacctgaggccggacctcaagag 317
>gb|CD226168.1|CD226168 CCC1_44_D06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_44_D06_A007 3', mRNA sequence
Length = 634
Score = 89.7 bits (45), Expect = 9e-016
Identities = 126/153 (82%)
Strand = Plus / Plus
Query: 1389 gatgtgatcaaggcagagagccaattcaacatagaagggatatgtgcttcttggttccag 1448
||||| ||||| || |||||||||||||||||||| || | ||||| | |||| ||
Sbjct: 151 gatgttatcaaagccgagagccaattcaacatagagggcctctgtgcagcctggtctcaa 210
Query: 1449 aatcagcagccacagcaacagctgcaggtagcaccagacatgtatgacaaggacttgcaa 1508
|||| ||||||||||||||| |||||||||| | |||| ||||||||| ||| |||||
Sbjct: 211 aatctgcagccacagcaacatctgcaggtagtatcagatttgtatgacagggatttgcag 270
Query: 1509 agaatgcaactatcttttgagaatatctaggca 1541
|||||| | |||||||||||||||||||||
Sbjct: 271 agaatgtccttgtcttttgagaatatctaggca 303
>gb|CW202832.1|CW202832 104_629_11185306_116_36915_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11185306, DNA
sequence
Length = 615
Score = 85.7 bits (43), Expect = 1e-014
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 399 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagaga 458
||||| || ||||| || |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 232 aggtgtggcaagagctgcaggctgaggtggataaactacctgaggccagacctcaagagg 173
Query: 459 ggggcattcgcccaagacgaagaagacctcatcat 493
|| ||||| | ||||| || || |||||||||||
Sbjct: 172 ggaacattctcacaagaggaggaggacctcatcat 138
Score = 83.8 bits (42), Expect = 6e-014
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 273 tgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactc 332
|||||| ||||| |||||||||| | |||||||||||||| |||||||| ||||| |||
Sbjct: 500 tgctgccacaagaagaagctgaggagagggctctggtcccccgaggaggacgagaagctc 441
Query: 333 atgaatcacataacaaagcatggccatggctgctggagctctgttcccaa 382
||||| ||||| | || | |||||||||||||||||||| || |||||
Sbjct: 440 atgaaccacattgcccagtacggccatggctgctggagctcagtgcccaa 391
>gb|CW193287.1|CW193287 104_616_11179485_148_36782_095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11179485, DNA
sequence
Length = 756
Score = 83.8 bits (42), Expect = 6e-014
Identities = 52/54 (96%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 1938 tgccatgcatgtccatgcaaattaattattgcatgttgtatttttcatttcttt 1991
||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 tgccatgcacgtccatgcaaattaattattgcatgttgta-ttttcatttcttt 53
>gb|CD213181.1|CD213181 HS1_29_B09.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_29_B09_A012 3', mRNA sequence
Length = 520
Score = 81.8 bits (41), Expect = 2e-013
Identities = 125/153 (81%)
Strand = Plus / Plus
Query: 1389 gatgtgatcaaggcagagagccaattcaacatagaagggatatgtgcttcttggttccag 1448
||||| ||||| || |||||||||||||||||||| || | ||||| | ||||| ||
Sbjct: 150 gatgttatcaaagccgagagccaattcaacatagagggcctctgtgcagcctggtttcaa 209
Query: 1449 aatcagcagccacagcaacagctgcaggtagcaccagacatgtatgacaaggacttgcaa 1508
||| ||||||||||||||| ||||||||| | |||| ||||||||||||| |||||
Sbjct: 210 aatttgcagccacagcaacatttgcaggtagtatcagatttgtatgacaaggatttgcag 269
Query: 1509 agaatgcaactatcttttgagaatatctaggca 1541
|||||| | |||||||||||||| ||||||
Sbjct: 270 agaatgtccttgtcttttgagaatatttaggca 302
>gb|CL150110.1|CL150110 104_331_10778290_114_31355_226 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10778290, DNA
sequence
Length = 531
Score = 79.8 bits (40), Expect = 9e-013
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 517 acaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatc 576
||||||||||||| |||||| |||||||||| ||| |||| || || ||| |||||||
Sbjct: 256 acaggtggtctcagattgcaacgcagctgccggggcggacggacaacgaggtcaagaact 315
Query: 577 tatggaactcgtgcatcaagaagaagct 604
| |||||||||| |||||||||||||||
Sbjct: 316 tctggaactcgtacatcaagaagaagct 343
Score = 71.9 bits (36), Expect = 2e-010
Identities = 81/96 (84%)
Strand = Plus / Plus
Query: 399 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagaga 458
||||| || ||||| || |||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 23 aggtgtgggaagagctgcaggctgaggtggatcaactacctgaggccggacctcaagagg 82
Query: 459 ggggcattcgcccaagacgaagaagacctcatcatc 494
|| |||||| | || || || || ||||||||||||
Sbjct: 83 ggagcattctcgcaggaagaggaggacctcatcatc 118
>gb|CW131835.1|CW131835 104_514_11115886_116_34787_081 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11115886, DNA
sequence
Length = 603
Score = 79.8 bits (40), Expect = 9e-013
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 517 acaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatc 576
||||||||||||| |||||| |||||||||| ||| |||| || || ||| |||||||
Sbjct: 444 acaggtggtctcagattgcaacgcagctgccggggcggacggacaacgaggtcaagaact 503
Query: 577 tatggaactcgtgcatcaagaagaagct 604
| |||||||||| |||||||||||||||
Sbjct: 504 tctggaactcgtacatcaagaagaagct 531
Score = 65.9 bits (33), Expect = 1e-008
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 418 ggctgaggtggataaactatctgaggccagacctcaagagaggggcattcgcccaagacg 477
|||||| |||||| ||||| |||||||||||||||||||| || |||||| | || || |
Sbjct: 230 ggctgacgtggatcaactacctgaggccagacctcaagaggggagcattctcgcatgaag 289
Query: 478 aagaagacctcatcatc 494
| || ||||||||||||
Sbjct: 290 aggaggacctcatcatc 306
>gb|CW180395.1|CW180395 104_594_11160615_148_36632_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11160615, DNA
sequence
Length = 673
Score = 79.8 bits (40), Expect = 9e-013
Identities = 76/88 (86%)
Strand = Plus / Minus
Query: 517 acaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatc 576
||||||||||||| |||||| |||||||||| ||| |||| || || ||| |||||||
Sbjct: 433 acaggtggtctcagattgcaacgcagctgccggggcggacggacaacgaggtcaagaact 374
Query: 577 tatggaactcgtgcatcaagaagaagct 604
| |||||||||| |||||||||||||||
Sbjct: 373 tctggaactcgtacatcaagaagaagct 346
Score = 69.9 bits (35), Expect = 9e-010
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 408 aagagttgtaggctgaggtggataaactatctgaggccagacctcaagagaggggcattc 467
||||| || |||||||||||||| ||||| |||||||| ||||||||||| || ||||||
Sbjct: 657 aagagctgcaggctgaggtggatcaactacctgaggccggacctcaagaggggagcattc 598
Query: 468 gcccaagacgaagaagacctcatcatc 494
| || || || || ||||||||||||
Sbjct: 597 tcgcaggaagaggaggacctcatcatc 571
>gb|CW119828.1|CW119828 104_497_11108982_116_34641_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11108982, DNA
sequence
Length = 635
Score = 71.9 bits (36), Expect = 2e-010
Identities = 93/112 (83%)
Strand = Plus / Plus
Query: 1389 gatgtgatcaaggcagagagccaattcaacatagaagggatatgtgcttcttggttccag 1448
||||| ||||| || |||||||||||||||||||| || | ||||| | |||| ||
Sbjct: 524 gatgttatcaaagccgagagccaattcaacatagagggcctctgtgcagcctggtctcaa 583
Query: 1449 aatcagcagccacagcaacagctgcaggtagcaccagacatgtatgacaagg 1500
|||| ||||||||||||||| |||||||||| | |||| ||||||||||||
Sbjct: 584 aatctgcagccacagcaacatctgcaggtagtatcagatttgtatgacaagg 635
Score = 65.9 bits (33), Expect = 1e-008
Identities = 90/109 (82%)
Strand = Plus / Plus
Query: 1168 ctaatcctagcagcagtagcagtactgggagcagagggagcaacagtatgggatttgaac 1227
|||||||||||||||| ||||||| || ||||| || |||||||| |||||||||| |
Sbjct: 291 ctaatcctagcagcagcagcagtagaggaagcagcggaagcaacagcttgggatttgagc 350
Query: 1228 cacagagcacgagcacaattctggagaacagtgtcttcccatggacaga 1276
|| ||||| ||| || ||||||| | ||||| ||||||||||||||
Sbjct: 351 ggcaaagcacaagctcacttctggaaagtagtgttttcccatggacaga 399
Score = 50.1 bits (25), Expect = 8e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1024 gcagcacaatttctacagtgatgccgccagtttcaccatcggccctctctacatcaa 1080
||||||| ||||| || |||||||| |||||||||||||| | ||||| |||||||
Sbjct: 156 gcagcaccatttccaccgtgatgccaccagtttcaccatcaactctctcaacatcaa 212
>gb|AF470066.1| Sorghum bicolor P-type R2R3 Myb protein (Myb27) gene, partial cds
Length = 1314
Score = 71.9 bits (36), Expect = 2e-010
Identities = 81/96 (84%)
Strand = Plus / Plus
Query: 399 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagaga 458
||||| || ||||| || |||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 983 aggtgtgggaagagctgcaggctgaggtggatcaactacctgaggccggacctcaagagg 1042
Query: 459 ggggcattcgcccaagacgaagaagacctcatcatc 494
|| |||||| | || || || || ||||||||||||
Sbjct: 1043 ggagcattctcgcaggaagaggaggacctcatcatc 1078
Score = 60.0 bits (30), Expect = 8e-007
Identities = 75/90 (83%)
Strand = Plus / Plus
Query: 281 caagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatca 340
|||| |||||||||| | ||| |||||||| || |||||||| || || ||||| || ||
Sbjct: 630 caagaagaagctgaggaggggcctctggtcgccggaggaggacgacaagctcatcaacca 689
Query: 341 cataacaaagcatggccatggctgctggag 370
||| | ||| |||||||||||||||||||
Sbjct: 690 cattgccaagtatggccatggctgctggag 719
>gb|CW202833.1|CW202833 104_629_11185306_148_37061_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11185306, DNA
sequence
Length = 592
Score = 69.9 bits (35), Expect = 9e-010
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 273 tgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactc 332
|||||| ||||| |||||||||| | |||||||||||||| |||||||| ||||| |||
Sbjct: 500 tgctgccacaagaagaagctgaggagagggctctggtcccccgaggaggacgagaagctc 559
Query: 333 atgaatcacat 343
||||| |||||
Sbjct: 560 atgaaccacat 570
>gb|BZ336394.1|BZ336394 hz34a02.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hz34a02 5', DNA sequence
Length = 561
Score = 67.9 bits (34), Expect = 3e-009
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 400 ggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagag 457
||||||| ||||| || |||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 138 ggtgcggcaagagctgcaggctgaggtggatcaactacctgaggccggacctcaagag 81
Score = 40.1 bits (20), Expect = 0.77
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 354 ggccatggctgctggagctc 373
||||||||||||||||||||
Sbjct: 394 ggccatggctgctggagctc 375
>gb|CW300014.1|CW300014 104_783_11463423_148_36246_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11463423, DNA
sequence
Length = 706
Score = 67.9 bits (34), Expect = 3e-009
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 400 ggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagag 457
||||||| ||||| || |||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 72 ggtgcggcaagagctgcaggctgaggtggatcaactacctgaggccggacctcaagag 129
>gb|CW480519.1|CW480519 fsbb001f239k04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f239k04, DNA
sequence
Length = 576
Score = 67.9 bits (34), Expect = 3e-009
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 400 ggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagag 457
||||||| ||||| || |||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 33 ggtgcggcaagagctgcaggctgaggtggatcaactacctgaggccggacctcaagag 90
>gb|CW487349.1|CW487349 fsbb001f253c15k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f253c15, DNA
sequence
Length = 692
Score = 67.9 bits (34), Expect = 3e-009
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 400 ggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagag 457
||||||| ||||| || |||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 36 ggtgcggcaagagctgcaggctgaggtggatcaactacctgaggccggacctcaagag 93
>gb|CW251033.1|CW251033 104_713_11223710_148_35059_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11223710, DNA
sequence
Length = 739
Score = 65.9 bits (33), Expect = 1e-008
Identities = 90/109 (82%)
Strand = Plus / Plus
Query: 1168 ctaatcctagcagcagtagcagtactgggagcagagggagcaacagtatgggatttgaac 1227
|||||||||||||||| ||||||| || ||||| || |||||||| |||||||||| |
Sbjct: 440 ctaatcctagcagcagcagcagtagaggaagcagcggaagcaacagcttgggatttgagc 499
Query: 1228 cacagagcacgagcacaattctggagaacagtgtcttcccatggacaga 1276
|| ||||| ||| || ||||||| | ||||| ||||||||||||||
Sbjct: 500 ggcaaagcacaagctcacttctggaaagtagtgttttcccatggacaga 548
Score = 50.1 bits (25), Expect = 8e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1024 gcagcacaatttctacagtgatgccgccagtttcaccatcggccctctctacatcaa 1080
||||||| ||||| || |||||||| |||||||||||||| | ||||| |||||||
Sbjct: 305 gcagcaccatttccaccgtgatgccaccagtttcaccatcaactctctcaacatcaa 361
>gb|CW448606.1|CW448606 fsbb001f182e24f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f182e24, DNA
sequence
Length = 740
Score = 65.9 bits (33), Expect = 1e-008
Identities = 90/109 (82%)
Strand = Plus / Minus
Query: 1168 ctaatcctagcagcagtagcagtactgggagcagagggagcaacagtatgggatttgaac 1227
|||||||||||||||| ||||||| || ||||| || |||||||| |||||||||| |
Sbjct: 313 ctaatcctagcagcagcagcagtagaggaagcagcggaagcaacagcttgggatttgagc 254
Query: 1228 cacagagcacgagcacaattctggagaacagtgtcttcccatggacaga 1276
|| ||||| ||| || ||||||| | ||||| ||||||||||||||
Sbjct: 253 ggcaaagcacaagctcacttctggaaagtagtgttttcccatggacaga 205
Score = 50.1 bits (25), Expect = 8e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1024 gcagcacaatttctacagtgatgccgccagtttcaccatcggccctctctacatcaa 1080
||||||| ||||| || |||||||| |||||||||||||| | ||||| |||||||
Sbjct: 448 gcagcaccatttccaccgtgatgccaccagtttcaccatcaactctctcaacatcaa 392
Score = 48.1 bits (24), Expect = 0.003
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 1389 gatgtgatcaaggcagagagccaattcaacatagaagggatatgtgcttcttggttccag 1448
||||| ||||| || |||||||||||||||||||| || | ||||| | |||| ||
Sbjct: 80 gatgttatcaaagccgagagccaattcaacatagagggcctctgtgcagcctggtctcaa 21
Query: 1449 aatcagcagccacagcaaca 1468
|||| |||||||||||||||
Sbjct: 20 aatctgcagccacagcaaca 1
>gb|CW454157.1|CW454157 fsbb001f198h17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f198h17, DNA
sequence
Length = 543
Score = 65.9 bits (33), Expect = 1e-008
Identities = 90/109 (82%)
Strand = Plus / Minus
Query: 1168 ctaatcctagcagcagtagcagtactgggagcagagggagcaacagtatgggatttgaac 1227
|||||||||||||||| ||||||| || ||||| || |||||||| |||||||||| |
Sbjct: 227 ctaatcctagcagcagcagcagtagaggaagcagcggaagcaacagcttgggatttgagc 168
Query: 1228 cacagagcacgagcacaattctggagaacagtgtcttcccatggacaga 1276
|| ||||| ||| || ||||||| | ||||| ||||||||||||||
Sbjct: 167 ggcaaagcacaagctcacttctggaaagtagtgttttcccatggacaga 119
Score = 50.1 bits (25), Expect = 8e-004
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1024 gcagcacaatttctacagtgatgccgccagtttcaccatcggccctctctacatcaa 1080
||||||| ||||| || |||||||| |||||||||||||| | ||||| |||||||
Sbjct: 362 gcagcaccatttccaccgtgatgccaccagtttcaccatcaactctctcaacatcaa 306
>gb|CD462462.1|CD462462 ETH1_37_D07.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_37_D07_A002 5', mRNA sequence
Length = 652
Score = 65.9 bits (33), Expect = 1e-008
Identities = 90/109 (82%)
Strand = Plus / Plus
Query: 1168 ctaatcctagcagcagtagcagtactgggagcagagggagcaacagtatgggatttgaac 1227
|||||||||||||||| ||||||| || ||||| || |||||||| |||||||||| |
Sbjct: 312 ctaatcctagcagcagcagcagtagaggaagcagcggaagcaacagcttgggatttgagc 371
Query: 1228 cacagagcacgagcacaattctggagaacagtgtcttcccatggacaga 1276
|| ||||| ||| || ||||||| | ||||| ||||||||||||||
Sbjct: 372 ggcaaagcacaagctcacttctggaaagtagtgttttcccatggacaga 420
Score = 63.9 bits (32), Expect = 5e-008
Identities = 89/108 (82%)
Strand = Plus / Plus
Query: 1389 gatgtgatcaaggcagagagccaattcaacatagaagggatatgtgcttcttggttccag 1448
||||| ||||| || |||||||||||||||||||| || | ||||| | |||| ||
Sbjct: 545 gatgttatcaaagccgagagccaattcaacatagagggcctctgtgcagcctggtctcaa 604
Query: 1449 aatcagcagccacagcaacagctgcaggtagcaccagacatgtatgac 1496
|||| ||||||||||||||| |||||||||| | |||| ||||||||
Sbjct: 605 aatctgcagccacagcaacatctgcaggtagtatcagatttgtatgac 652
Score = 50.1 bits (25), Expect = 8e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1024 gcagcacaatttctacagtgatgccgccagtttcaccatcggccctctctacatcaa 1080
||||||| ||||| || |||||||| |||||||||||||| | ||||| |||||||
Sbjct: 177 gcagcaccatttccaccgtgatgccaccagtttcaccatcaactctctcaacatcaa 233
>gb|CW092858.1|CW092858 104_455_10999423_116_33051_022 Sorghum methylation filtered
library (LibID: 104) Sorghum bicolor genomic clone
10999423, DNA sequence
Length = 538
Score = 63.9 bits (32), Expect = 5e-008
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 5 cctttccttgctttccactgaaatctcctatctgca 40
|||||||||||| |||||||||||||||||||||||
Sbjct: 41 cctttccttgctctccactgaaatctcctatctgca 6
>gb|CW136797.1|CW136797 104_521_11118569_148_34842_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11118569, DNA
sequence
Length = 576
Score = 61.9 bits (31), Expect = 2e-007
Identities = 85/103 (82%)
Strand = Plus / Minus
Query: 538 cgcagctgccagggaggactgataatgagatcaagaatctatggaactcgtgcatcaaga 597
|||||||||| |||||||| || || ||||||||||| | |||||| || ||||||||
Sbjct: 303 cgcagctgccggggaggacggacaacgagatcaagaaccactggaacacgcacatcaaga 244
Query: 598 agaagctgaggcagaaaggcattgatcccaacacccacaagcc 640
||||||| ||| ||| ||||| || ||| ||||||||||||
Sbjct: 243 agaagctcaggaagatgggcatcgaccccgtcacccacaagcc 201
>gb|CW372021.1|CW372021 fsbb001f047l20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f047l20, DNA
sequence
Length = 679
Score = 61.9 bits (31), Expect = 2e-007
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 518 caggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatct 577
||||||||| || || ||| |||||||||| ||| |||| || || ||||| || || |
Sbjct: 121 caggtggtcccagatcgcatcgcagctgccggggcggacggacaacgagattaaaaactt 180
Query: 578 atggaactcgtgcatcaagaagaagct 604
||||||||||||||||||||||||||
Sbjct: 181 ctggaactcgtgcatcaagaagaagct 207
>gb|CW396674.1|CW396674 fsbb001f085d16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f085d16, DNA
sequence
Length = 652
Score = 61.9 bits (31), Expect = 2e-007
Identities = 85/103 (82%)
Strand = Plus / Plus
Query: 538 cgcagctgccagggaggactgataatgagatcaagaatctatggaactcgtgcatcaaga 597
|||||||||| |||||||| || || ||||||||||| | |||||| || ||||||||
Sbjct: 250 cgcagctgccggggaggacggacaacgagatcaagaaccactggaacacgcacatcaaga 309
Query: 598 agaagctgaggcagaaaggcattgatcccaacacccacaagcc 640
||||||| ||| ||| ||||| || ||| ||||||||||||
Sbjct: 310 agaagctcaggaagatgggcatcgaccccgtcacccacaagcc 352
>gb|AF474131.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb54) gene, partial
cds
Length = 1899
Score = 61.9 bits (31), Expect = 2e-007
Identities = 85/103 (82%)
Strand = Plus / Plus
Query: 538 cgcagctgccagggaggactgataatgagatcaagaatctatggaactcgtgcatcaaga 597
|||||||||| |||||||| || || ||||||||||| | |||||| || ||||||||
Sbjct: 1693 cgcagctgccggggaggacggacaacgagatcaagaaccactggaacacgcacatcaaga 1752
Query: 598 agaagctgaggcagaaaggcattgatcccaacacccacaagcc 640
||||||| ||| ||| ||||| || ||| ||||||||||||
Sbjct: 1753 agaagctcaggaagatgggcatcgaccccgtcacccacaagcc 1795
>gb|BZ345658.1|BZ345658 hs87e07.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hs87e07 5', DNA sequence
Length = 593
Score = 60.0 bits (30), Expect = 8e-007
Identities = 75/90 (83%)
Strand = Plus / Plus
Query: 281 caagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatca 340
|||| |||||||||| | ||| |||||||| || |||||||| || || ||||| || ||
Sbjct: 415 caagaagaagctgaggaggggcctctggtcgccggaggaggacgacaagctcatcaacca 474
Query: 341 cataacaaagcatggccatggctgctggag 370
||| | ||| |||||||||||||||||||
Sbjct: 475 cattgccaagtatggccatggctgctggag 504
>gb|CW128322.1|CW128322 104_509_11113940_116_34745_066 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113940, DNA
sequence
Length = 584
Score = 56.0 bits (28), Expect = 1e-005
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 402 tgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagag 457
||||| ||||| || |||||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 143 tgcggcaagagctgcaggctgagatggatcaactacctgaggcctgacctcaagag 198
Score = 42.1 bits (21), Expect = 0.20
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 518 caggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatct 577
||||||||| || || ||| |||||||||| ||| |||| || || ||||| || || |
Sbjct: 508 caggtggtcccagatcgcatcgcagctgccggggcggacggacaacgagattaaaaactt 567
Query: 578 atggaactcgtgcatca 594
||||||||||||||||
Sbjct: 568 ctggaactcgtgcatca 584
>gb|CW257715.1|CW257715 104_723_11227485_116_35160_091 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227485, DNA
sequence
Length = 666
Score = 56.0 bits (28), Expect = 1e-005
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 402 tgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagag 457
||||| ||||| || |||||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 331 tgcggcaagagctgcaggctgagatggatcaactacctgaggcctgacctcaagag 276
>gb|CW317106.1|CW317106 104_808_11473239_116_35853_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473239, DNA
sequence
Length = 633
Score = 56.0 bits (28), Expect = 1e-005
Identities = 82/100 (82%)
Strand = Plus / Minus
Query: 538 cgcagctgccagggaggactgataatgagatcaagaatctatggaactcgtgcatcaaga 597
|||||||||| |||||||| || || ||||||||||| | |||||| || ||||||||
Sbjct: 100 cgcagctgccggggaggacggacaacgagatcaagaaccactggaacacgcacatcaaga 41
Query: 598 agaagctgaggcagaaaggcattgatcccaacacccacaa 637
||||||| ||| ||| ||||| || ||| |||||||||
Sbjct: 40 agaagctcaggaagatgggcatcgaccccgtcacccacaa 1
>gb|CW364381.1|CW364381 fsbb001f036g09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f036g09, DNA
sequence
Length = 727
Score = 56.0 bits (28), Expect = 1e-005
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 402 tgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagag 457
||||| ||||| || |||||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 130 tgcggcaagagctgcaggctgagatggatcaactacctgaggcctgacctcaagag 75
>gb|CW378977.1|CW378977 fsbb001f057p23k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f057p23, DNA
sequence
Length = 677
Score = 56.0 bits (28), Expect = 1e-005
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 402 tgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagag 457
||||| ||||| || |||||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 220 tgcggcaagagctgcaggctgagatggatcaactacctgaggcctgacctcaagag 165
>gb|CW140879.1|CW140879 104_531_11136014_116_34925_053 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11136014, DNA
sequence
Length = 721
Score = 54.0 bits (27), Expect = 5e-005
Identities = 81/99 (81%)
Strand = Plus / Minus
Query: 273 tgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactc 332
|||||| || |||||||| ||| | ||||||||||||||||||||| ||||| || |||
Sbjct: 438 tgctgcaaccagcagaaggtgaagagggggctctggtcccctgaggaagatgaaaagctc 379
Query: 333 atgaatcacataacaaagcatggccatggctgctggagc 371
|| | |||| || | |||||| ||||||||||||||
Sbjct: 378 atcagatacatcaccacccatggctatggctgctggagc 340
>gb|CW148312.1|CW148312 104_542_11140354_116_35003_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11140354, DNA
sequence
Length = 676
Score = 54.0 bits (27), Expect = 5e-005
Identities = 81/99 (81%)
Strand = Plus / Minus
Query: 273 tgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactc 332
|||||| || |||||||| ||| | ||||||||||||||||||||| ||||| || |||
Sbjct: 581 tgctgcaaccagcagaaggtgaagagggggctctggtcccctgaggaagatgaaaagctc 522
Query: 333 atgaatcacataacaaagcatggccatggctgctggagc 371
|| | |||| || | |||||| ||||||||||||||
Sbjct: 521 atcagatacatcaccacccatggctatggctgctggagc 483
>gb|CN138550.1|CN138550 OX1_64_A08.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_64_A08_A002 5', mRNA sequence
Length = 876
Score = 54.0 bits (27), Expect = 5e-005
Identities = 81/99 (81%)
Strand = Plus / Plus
Query: 273 tgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactc 332
|||||| || |||||||| ||| | ||||||||||||||||||||| ||||| || |||
Sbjct: 186 tgctgcaaccagcagaaggtgaagagggggctctggtcccctgaggaagatgaaaagctc 245
Query: 333 atgaatcacataacaaagcatggccatggctgctggagc 371
|| | |||| || | |||||| ||||||||||||||
Sbjct: 246 atcagatacatcaccacccatggctatggctgctggagc 284
>gb|AF474130.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb53) gene, partial
cds
Length = 1892
Score = 54.0 bits (27), Expect = 5e-005
Identities = 84/103 (81%)
Strand = Plus / Plus
Query: 538 cgcagctgccagggaggactgataatgagatcaagaatctatggaactcgtgcatcaaga 597
|||||||||| |||||||| || || ||||||||||| | |||||| || ||||||||
Sbjct: 1619 cgcagctgccggggaggacggacaacgagatcaagaaccactggaacacgcacatcaaga 1678
Query: 598 agaagctgaggcagaaaggcattgatcccaacacccacaagcc 640
||||||| ||| ||| ||||| | ||| ||||||||||||
Sbjct: 1679 agaagctcaggaagatgggcatctaccccgtcacccacaagcc 1721
>gb|AF474133.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb67) gene, partial
cds
Length = 2224
Score = 54.0 bits (27), Expect = 5e-005
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 538 cgcagctgccagggaggactgataatgagatcaagaatctatggaactcgtgcatcaaga 597
|||||||||| |||||||| || || ||||||||||| | |||||| || ||||||||
Sbjct: 1892 cgcagctgccggggaggacggacaacgagatcaagaaccactggaacacgcacatcaaga 1951
Query: 598 agaagct 604
|||||||
Sbjct: 1952 agaagct 1958
>gb|CW140880.1|CW140880 104_531_11136014_148_34921_053 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11136014, DNA
sequence
Length = 669
Score = 52.0 bits (26), Expect = 2e-004
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 273 tgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactc 332
|||||| || |||||||| ||| | ||||||||||||||||||||| ||||| || |||
Sbjct: 574 tgctgcaaccagcagaaggtgaagagggggctctggtcccctgaggaagatgaaaagctc 633
Query: 333 at 334
||
Sbjct: 634 at 635
>gb|CW154932.1|CW154932 104_557_11145867_116_36359_012 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145867, DNA
sequence
Length = 665
Score = 52.0 bits (26), Expect = 2e-004
Identities = 49/54 (90%), Gaps = 2/54 (3%)
Strand = Plus / Minus
Query: 552 aggactgataatgagatcaagaatcta-tggaactcgtgcatcaagaagaagct 604
||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct: 593 aggacagataatgagatcaagaa-ctactggaactcacgcatcaagaagaagct 541
>gb|CW166340.1|CW166340 104_575_11153002_116_36764_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11153002, DNA
sequence
Length = 661
Score = 52.0 bits (26), Expect = 2e-004
Identities = 49/54 (90%), Gaps = 2/54 (3%)
Strand = Plus / Minus
Query: 552 aggactgataatgagatcaagaatcta-tggaactcgtgcatcaagaagaagct 604
||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct: 56 aggacagataatgagatcaagaa-ctactggaactcacgcatcaagaagaagct 4
Score = 38.2 bits (19), Expect = 3.1
Identities = 43/51 (84%)
Strand = Plus / Minus
Query: 403 gcggaaagagttgtaggctgaggtggataaactatctgaggccagacctca 453
|||| ||||| || || ||||| ||||| ||||||||| |||||||||||
Sbjct: 305 gcgggaagagctgcagactgagatggatgaactatctgcagccagacctca 255
>gb|CW217449.1|CW217449 104_650_11195661_148_37134_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195661, DNA
sequence
Length = 678
Score = 52.0 bits (26), Expect = 2e-004
Identities = 49/54 (90%), Gaps = 2/54 (3%)
Strand = Plus / Minus
Query: 552 aggactgataatgagatcaagaatcta-tggaactcgtgcatcaagaagaagct 604
||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct: 392 aggacagataatgagatcaagaa-ctactggaactcacgcatcaagaagaagct 340
Score = 38.2 bits (19), Expect = 3.1
Identities = 43/51 (84%)
Strand = Plus / Minus
Query: 403 gcggaaagagttgtaggctgaggtggataaactatctgaggccagacctca 453
|||| ||||| || || ||||| ||||| ||||||||| |||||||||||
Sbjct: 641 gcgggaagagctgcagactgagatggatgaactatctgcagccagacctca 591
>gb|CW276952.1|CW276952 104_750_11405764_148_35399_002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405764, DNA
sequence
Length = 693
Score = 52.0 bits (26), Expect = 2e-004
Identities = 49/54 (90%), Gaps = 2/54 (3%)
Strand = Plus / Plus
Query: 552 aggactgataatgagatcaagaatcta-tggaactcgtgcatcaagaagaagct 604
||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct: 91 aggacagataatgagatcaagaa-ctactggaactcacgcatcaagaagaagct 143
>gb|CW338064.1|CW338064 104_838_11484544_116_36125_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11484544, DNA
sequence
Length = 683
Score = 52.0 bits (26), Expect = 2e-004
Identities = 49/54 (90%), Gaps = 2/54 (3%)
Strand = Plus / Minus
Query: 552 aggactgataatgagatcaagaatcta-tggaactcgtgcatcaagaagaagct 604
||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct: 546 aggacagataatgagatcaagaa-ctactggaactcacgcatcaagaagaagct 494
>gb|CW338065.1|CW338065 104_838_11484544_148_36124_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11484544, DNA
sequence
Length = 735
Score = 52.0 bits (26), Expect = 2e-004
Identities = 49/54 (90%), Gaps = 2/54 (3%)
Strand = Plus / Plus
Query: 552 aggactgataatgagatcaagaatcta-tggaactcgtgcatcaagaagaagct 604
||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct: 365 aggacagataatgagatcaagaa-ctactggaactcacgcatcaagaagaagct 417
Score = 38.2 bits (19), Expect = 3.1
Identities = 43/51 (84%)
Strand = Plus / Plus
Query: 403 gcggaaagagttgtaggctgaggtggataaactatctgaggccagacctca 453
|||| ||||| || || ||||| ||||| ||||||||| |||||||||||
Sbjct: 116 gcgggaagagctgcagactgagatggatgaactatctgcagccagacctca 166
>gb|CW172349.1|CW172349 104_583_11156244_148_36539_040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11156244, DNA
sequence
Length = 537
Score = 48.1 bits (24), Expect = 0.003
Identities = 44/48 (91%), Gaps = 2/48 (4%)
Strand = Plus / Plus
Query: 558 gataatgagatcaagaatcta-tggaactcgtgcatcaagaagaagct 604
||||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct: 2 gataatgagatcaagaa-ctactggaactcacgcatcaagaagaagct 48
>gb|CW180394.1|CW180394 104_594_11160615_116_36636_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11160615, DNA
sequence
Length = 548
Score = 48.1 bits (24), Expect = 0.003
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 517 acaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatc 576
||||||||||||| |||||| | |||||||| ||| |||| || || ||| |||||||
Sbjct: 473 acaggtggtctcacattgcaactcagctgccggggcggacggacaacgaggtcaagaact 532
Query: 577 tatggaactcgt 588
| ||||||||||
Sbjct: 533 tctggaactcgt 544
Score = 48.1 bits (24), Expect = 0.003
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 419 gctgaggtggataaactatctgaggccagacctcaagagaggggcattcgcccaagacga 478
||||| |||||| ||||| |||||||| ||||||||||| | |||||| | || || ||
Sbjct: 260 gctgacgtggatcaactacctgaggccggacctcaagaggagagcattctcgcaggaaga 319
Query: 479 agaagacctcatcatc 494
|| ||||||||||||
Sbjct: 320 ggaggacctcatcatc 335
>gb|CW256513.1|CW256513 104_721_11226833_148_35142_069 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11226833, DNA
sequence
Length = 573
Score = 48.1 bits (24), Expect = 0.003
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 306 tggtcccctgaggaggatgagaaactcatgaatcacataacaaagcatggccatggctgc 365
||||| || |||||||| ||||| ||||| || |||| || | ||| ||||||||||||
Sbjct: 119 tggtcgccggaggaggacgagaagctcatcaagtacatcaccacgcacggccatggctgc 60
Query: 366 tggagctc 373
||||||||
Sbjct: 59 tggagctc 52
>gb|CW366211.1|CW366211 fsbb001f039b18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f039b18, DNA
sequence
Length = 534
Score = 48.1 bits (24), Expect = 0.003
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 306 tggtcccctgaggaggatgagaaactcatgaatcacataacaaagcatggccatggctgc 365
||||| || |||||||| ||||| ||||| || |||| || | ||| ||||||||||||
Sbjct: 89 tggtcgccggaggaggacgagaagctcatcaagtacatcaccacgcacggccatggctgc 30
Query: 366 tggagctc 373
||||||||
Sbjct: 29 tggagctc 22
>gb|CW373042.1|CW373042 fsbb001f049d12k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f049d12, DNA
sequence
Length = 657
Score = 48.1 bits (24), Expect = 0.003
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 306 tggtcccctgaggaggatgagaaactcatgaatcacataacaaagcatggccatggctgc 365
||||| || |||||||| ||||| ||||| || |||| || | ||| ||||||||||||
Sbjct: 366 tggtcgccggaggaggacgagaagctcatcaagtacatcaccacgcacggccatggctgc 425
Query: 366 tggagctc 373
||||||||
Sbjct: 426 tggagctc 433
>gb|CW403563.1|CW403563 fsbb001f095f12f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f095f12, DNA
sequence
Length = 762
Score = 48.1 bits (24), Expect = 0.003
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 399 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggcca 446
|||||||| ||||| || |||||| ||||| | |||||||||||||||
Sbjct: 598 aggtgcggcaagagctgcaggctgcggtggctcaactatctgaggcca 645
>gb|CW041910.1|CW041910 104_275_10506824_115_30285 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506824, DNA
sequence
Length = 625
Score = 46.1 bits (23), Expect = 0.013
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 399 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagag 457
|||||||| ||||| || ||||| |||||| ||||| |||||||| |||||||||||
Sbjct: 76 aggtgcgggaagagctgccggctgcggtggaccaactacctgaggccggacctcaagag 134
>gb|CW065792.1|CW065792 104_312_10523339_115_30130 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10523339, DNA
sequence
Length = 607
Score = 46.1 bits (23), Expect = 0.013
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 552 aggactgataatgagatcaagaatctatggaactcgtgcatcaagaagaagctga 606
|||||||| || ||||||||||| | |||||| || |||||||||||||||||
Sbjct: 190 aggactgacaacgagatcaagaaccactggaacacgcacatcaagaagaagctga 244
>gb|CW215467.1|CW215467 104_647_11194554_116_37464_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194554, DNA
sequence
Length = 615
Score = 46.1 bits (23), Expect = 0.013
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 399 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagag 457
|||||||| ||||| || ||||| |||||| ||||| |||||||| |||||||||||
Sbjct: 249 aggtgcgggaagagctgccggctgcggtggaccaactacctgaggccggacctcaagag 307
>gb|CW235373.1|CW235373 104_690_11214948_116_37410_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214948, DNA
sequence
Length = 697
Score = 46.1 bits (23), Expect = 0.013
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 552 aggactgataatgagatcaagaatctatggaactcgtgcatcaagaagaagctga 606
|||||||| || ||||||||||| | |||||| || |||||||||||||||||
Sbjct: 196 aggactgacaacgagatcaagaaccactggaacacgcacatcaagaagaagctga 250
>gb|CW269199.1|CW269199 104_740_11401724_116_36231_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401724, DNA
sequence
Length = 658
Score = 46.1 bits (23), Expect = 0.013
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 399 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagag 457
|||||||| ||||| || ||||| |||||| ||||| |||||||| |||||||||||
Sbjct: 581 aggtgcgggaagagctgccggctgcggtggaccaactacctgaggccggacctcaagag 523
>gb|CW269200.1|CW269200 104_740_11401724_148_36232_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401724, DNA
sequence
Length = 693
Score = 46.1 bits (23), Expect = 0.013
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 399 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagag 457
|||||||| ||||| || ||||| |||||| ||||| |||||||| |||||||||||
Sbjct: 625 aggtgcgggaagagctgccggctgcggtggaccaactacctgaggccggacctcaagag 683
>gb|CW344541.1|CW344541 104_847_11488007_148_36198_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488007, DNA
sequence
Length = 620
Score = 46.1 bits (23), Expect = 0.013
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 273 tgctgctacaagcagaagctgagaaaggggctctggtcccctgagga 319
|||||| || |||||||| ||| | |||||||||||||||||||||
Sbjct: 560 tgctgcaaccagcagaaggtgaagagggggctctggtcccctgagga 514
>gb|CW377165.1|CW377165 fsbb001f055f22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f055f22, DNA
sequence
Length = 720
Score = 46.1 bits (23), Expect = 0.013
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 552 aggactgataatgagatcaagaatctatggaactcgtgcatcaagaagaagctga 606
|||||||| || ||||||||||| | |||||| || |||||||||||||||||
Sbjct: 283 aggactgacaacgagatcaagaaccactggaacacgcacatcaagaagaagctga 337
>gb|CW419529.1|CW419529 fsbb001f124g17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f124g17, DNA
sequence
Length = 613
Score = 46.1 bits (23), Expect = 0.013
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 399 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagag 457
|||||||| ||||| || ||||| |||||| ||||| |||||||| |||||||||||
Sbjct: 216 aggtgcgggaagagctgccggctgcggtggaccaactacctgaggccggacctcaagag 158
>gb|CX608115.1|CX608115 ANR1_32_F03.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_32_F03_A002 5', mRNA sequence
Length = 586
Score = 46.1 bits (23), Expect = 0.013
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 552 aggactgataatgagatcaagaatctatggaactcgtgcatcaagaagaagctga 606
|||||||| || ||||||||||| | |||||| || |||||||||||||||||
Sbjct: 470 aggactgacaacgagatcaagaaccactggaacacgcacatcaagaagaagctga 524
>gb|CX611399.1|CX611399 ANR1_24_A06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_24_A06_A002 5', mRNA sequence
Length = 771
Score = 46.1 bits (23), Expect = 0.013
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 399 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagaga 458
||||| || ||||| || ||||||||||||| | ||| ||||||||||| ||||||||
Sbjct: 242 aggtgtggcaagagctgcaggctgaggtggaccagctacttgaggccagacatcaagaga 301
Query: 459 ggg 461
|||
Sbjct: 302 ggg 304
>gb|CW258078.1|CW258078 104_723_11227682_116_35159_001 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227682, DNA
sequence
Length = 617
Score = 44.1 bits (22), Expect = 0.049
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 579 tggaactcgtgcatcaagaagaagct 604
|||||||| |||||||||||||||||
Sbjct: 5 tggaactcatgcatcaagaagaagct 30
>gb|CW310980.1|CW310980 104_800_11469995_148_35755_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469995, DNA
sequence
Length = 655
Score = 44.1 bits (22), Expect = 0.049
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 579 tggaactcgtgcatcaagaagaagct 604
|||||||| |||||||||||||||||
Sbjct: 1 tggaactcatgcatcaagaagaagct 26
>gb|BG104097.1|BG104097 RHIZ2_40_E04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 448
Score = 44.1 bits (22), Expect = 0.049
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 400 ggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagagag 459
||||||| ||||| || |||||| | ||||| ||||| |||||| | || ||||||||||
Sbjct: 175 ggtgcgggaagagctgcaggctgcgatggatcaactacctgagggcggatctcaagagag 234
Query: 460 gg 461
||
Sbjct: 235 gg 236
>gb|CD235285.1|CD235285 SS1_28_H11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_28_H11_A012 5', mRNA sequence
Length = 650
Score = 44.1 bits (22), Expect = 0.049
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 363 tgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaagag 412
||||||||||| || ||||| ||||| ||||| || |||||||| |||||
Sbjct: 280 tgctggagctccgtgcccaagctcgcagggctgcagaggtgcggcaagag 329
>gb|CX616786.1|CX616786 GABR1_29_H12.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_29_H12_A002 5', mRNA sequence
Length = 745
Score = 44.1 bits (22), Expect = 0.049
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 363 tgctggagctctgttcccaaactcgctgggcttcaaaggtgcggaaagag 412
||||||||||| || ||||| ||||| ||||| || |||||||| |||||
Sbjct: 435 tgctggagctccgtgcccaagctcgcagggctgcagaggtgcggcaagag 484
>gb|CW087483.1|CW087483 104_432_10947659_114_32550_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10947659, DNA
sequence
Length = 686
Score = 42.1 bits (21), Expect = 0.20
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 360 ggctgctggagctctgttcccaaactcgc 388
||||||||||||||||| ||||| |||||
Sbjct: 162 ggctgctggagctctgtacccaagctcgc 190
>gb|CW099615.1|CW099615 104_466_11003648_116_34383_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11003648, DNA
sequence
Length = 664
Score = 42.1 bits (21), Expect = 0.20
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 360 ggctgctggagctctgttcccaaactcgc 388
||||||||||||||||| ||||| |||||
Sbjct: 516 ggctgctggagctctgtacccaagctcgc 488
>gb|CW167237.1|CW167237 104_576_11153492_116_36486_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11153492, DNA
sequence
Length = 608
Score = 42.1 bits (21), Expect = 0.20
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 360 ggctgctggagctctgttcccaaactcgc 388
||||||||||||||||| ||||| |||||
Sbjct: 446 ggctgctggagctctgtacccaagctcgc 474
>gb|CW422256.1|CW422256 fsbb001f131h06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f131h06, DNA
sequence
Length = 470
Score = 42.1 bits (21), Expect = 0.20
Identities = 69/85 (81%)
Strand = Plus / Minus
Query: 281 caagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatca 340
|||| |||||||||| | ||| |||||||| || |||||||| || || ||||| || ||
Sbjct: 94 caagaagaagctgaggaggggcctctggtcgccggaggaggacgacaagctcatcaacca 35
Query: 341 cataacaaagcatggccatggctgc 365
||| | || ||||||||||||||
Sbjct: 34 cattgccgagtatggccatggctgc 10
>gb|CW045801.1|CW045801 104_282_10509787_114_30228 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10509787, DNA
sequence
Length = 398
Score = 40.1 bits (20), Expect = 0.77
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 539 gcagctgccagggaggactgataatgagatcaagaa 574
|||||| ||||||||||| || || |||||||||||
Sbjct: 3 gcagctcccagggaggacggacaacgagatcaagaa 38
>gb|CW066615.1|CW066615 104_313_10523776_114_30148 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10523776, DNA
sequence
Length = 428
Score = 40.1 bits (20), Expect = 0.77
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 539 gcagctgccagggaggactgataatgagatcaagaa 574
|||||| ||||||||||| || || |||||||||||
Sbjct: 36 gcagctcccagggaggacggacaacgagatcaagaa 71
>gb|CW266637.1|CW266637 104_736_11232538_148_35286_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232538, DNA
sequence
Length = 574
Score = 40.1 bits (20), Expect = 0.77
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 539 gcagctgccagggaggactgataatgagatcaagaa 574
|||||| ||||||||||| || || |||||||||||
Sbjct: 178 gcagctcccagggaggacggacaacgagatcaagaa 213
>gb|CW310158.1|CW310158 104_799_11469571_116_37434_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469571, DNA
sequence
Length = 449
Score = 40.1 bits (20), Expect = 0.77
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 539 gcagctgccagggaggactgataatgagatcaagaa 574
|||||| ||||||||||| || || |||||||||||
Sbjct: 73 gcagctcccagggaggacggacaacgagatcaagaa 108
>gb|CW449861.1|CW449861 fsbb001f188d08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f188d08, DNA
sequence
Length = 530
Score = 40.1 bits (20), Expect = 0.77
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 539 gcagctgccagggaggactgataatgagatcaagaa 574
|||||| ||||||||||| || || |||||||||||
Sbjct: 270 gcagctcccagggaggacggacaacgagatcaagaa 305
>gb|CW454633.1|CW454633 fsbb001f199c24k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f199c24, DNA
sequence
Length = 343
Score = 40.1 bits (20), Expect = 0.77
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 539 gcagctgccagggaggactgataatgagatcaagaa 574
|||||| ||||||||||| || || |||||||||||
Sbjct: 119 gcagctcccagggaggacggacaacgagatcaagaa 84
>gb|AY363131.1| Sorghum bicolor P-type R2R3 Myb protein (Myb28) gene, partial cds
Length = 337
Score = 40.1 bits (20), Expect = 0.77
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 354 ggccatggctgctggagctc 373
||||||||||||||||||||
Sbjct: 10 ggccatggctgctggagctc 29
>gb|CL157642.1|CL157642 104_345_10783745_114_31477_305 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10783745, DNA
sequence
Length = 771
Score = 38.2 bits (19), Expect = 3.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1452 cagcagccacagcaacagc 1470
|||||||||||||||||||
Sbjct: 690 cagcagccacagcaacagc 708
>gb|CL157643.1|CL157643 104_345_10783745_116_31478_305 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10783745, DNA
sequence
Length = 654
Score = 38.2 bits (19), Expect = 3.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1452 cagcagccacagcaacagc 1470
|||||||||||||||||||
Sbjct: 186 cagcagccacagcaacagc 168
>gb|CW039028.1|CW039028 104_271_10505257_114_30387 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10505257, DNA
sequence
Length = 681
Score = 38.2 bits (19), Expect = 3.1
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 544 tgccagggaggactgataatgagatcaagaa 574
|||||||| | ||||| ||||||||||||||
Sbjct: 444 tgccagggcgcactgacaatgagatcaagaa 474
>gb|CW044723.1|CW044723 104_280_10509121_114_30262 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10509121, DNA
sequence
Length = 643
Score = 38.2 bits (19), Expect = 3.1
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 552 aggactgataatgagatcaagaa 574
||||| |||||||||||||||||
Sbjct: 599 aggacagataatgagatcaagaa 621
Score = 38.2 bits (19), Expect = 3.1
Identities = 43/51 (84%)
Strand = Plus / Plus
Query: 403 gcggaaagagttgtaggctgaggtggataaactatctgaggccagacctca 453
|||| ||||| || || ||||| ||||| ||||||||| |||||||||||
Sbjct: 350 gcgggaagagctgcagactgagatggatgaactatctgcagccagacctca 400
>gb|CW062461.1|CW062461 104_307_10521353_1_30043 Sorghum methylation filtered library (LibID:
104) Sorghum bicolor genomic clone 10521353, DNA sequence
Length = 625
Score = 38.2 bits (19), Expect = 3.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1519 tatcttttgagaatatcta 1537
|||||||||||||||||||
Sbjct: 111 tatcttttgagaatatcta 129
>gb|CW125548.1|CW125548 104_505_11112386_148_34710_001 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11112386, DNA
sequence
Length = 569
Score = 38.2 bits (19), Expect = 3.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1452 cagcagccacagcaacagc 1470
|||||||||||||||||||
Sbjct: 46 cagcagccacagcaacagc 28
>gb|CW154933.1|CW154933 104_557_11145867_148_36360_012 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145867, DNA
sequence
Length = 626
Score = 38.2 bits (19), Expect = 3.1
Identities = 43/51 (84%)
Strand = Plus / Plus
Query: 403 gcggaaagagttgtaggctgaggtggataaactatctgaggccagacctca 453
|||| ||||| || || ||||| ||||| ||||||||| |||||||||||
Sbjct: 380 gcgggaagagctgcagactgagatggatgaactatctgcagccagacctca 430
>gb|CW212940.1|CW212940 104_644_11191287_116_37030_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11191287, DNA
sequence
Length = 618
Score = 38.2 bits (19), Expect = 3.1
Identities = 34/39 (87%)
Strand = Plus / Minus
Query: 488 catcatcgagctgcacgctgtcctcgggaacaggtggtc 526
||||||| |||||||| | ||| |||| |||||||||||
Sbjct: 240 catcatcaagctgcactccgtcgtcggcaacaggtggtc 202
>gb|CW217448.1|CW217448 104_650_11195661_116_37133_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195661, DNA
sequence
Length = 602
Score = 38.2 bits (19), Expect = 3.1
Identities = 43/51 (84%)
Strand = Plus / Plus
Query: 403 gcggaaagagttgtaggctgaggtggataaactatctgaggccagacctca 453
|||| ||||| || || ||||| ||||| ||||||||| |||||||||||
Sbjct: 536 gcgggaagagctgcagactgagatggatgaactatctgcagccagacctca 586
>gb|CW247183.1|CW247183 104_708_11221657_116_36081_013 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221657, DNA
sequence
Length = 652
Score = 38.2 bits (19), Expect = 3.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1452 cagcagccacagcaacagc 1470
|||||||||||||||||||
Sbjct: 205 cagcagccacagcaacagc 187
>gb|CW258488.1|CW258488 104_724_11227903_116_35164_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227903, DNA
sequence
Length = 664
Score = 38.2 bits (19), Expect = 3.1
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 544 tgccagggaggactgataatgagatcaagaa 574
|||||||| | ||||| ||||||||||||||
Sbjct: 173 tgccagggcgcactgacaatgagatcaagaa 143
>gb|CW308697.1|CW308697 104_797_11468806_116_35720_091 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11468806, DNA
sequence
Length = 625
Score = 38.2 bits (19), Expect = 3.1
Identities = 34/39 (87%)
Strand = Plus / Minus
Query: 488 catcatcgagctgcacgctgtcctcgggaacaggtggtc 526
||||||| |||||||| | ||| |||| |||||||||||
Sbjct: 39 catcatcaagctgcactccgtcgtcggcaacaggtggtc 1
>gb|CW316832.1|CW316832 104_808_11473099_148_35857_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473099, DNA
sequence
Length = 586
Score = 38.2 bits (19), Expect = 3.1
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 544 tgccagggaggactgataatgagatcaagaa 574
|||||||| | ||||| ||||||||||||||
Sbjct: 545 tgccagggcgcactgacaatgagatcaagaa 575
>gb|CW324222.1|CW324222 104_818_11477041_148_35906_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11477041, DNA
sequence
Length = 767
Score = 38.2 bits (19), Expect = 3.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1519 tatcttttgagaatatcta 1537
|||||||||||||||||||
Sbjct: 57 tatcttttgagaatatcta 75
>gb|CW363913.1|CW363913 fsbb001f035l18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f035l18, DNA
sequence
Length = 712
Score = 38.2 bits (19), Expect = 3.1
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 544 tgccagggaggactgataatgagatcaagaa 574
|||||||| | ||||| ||||||||||||||
Sbjct: 510 tgccagggcgcactgacaatgagatcaagaa 540
>gb|CW363914.1|CW363914 fsbb001f035l18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f035l18, DNA
sequence
Length = 659
Score = 38.2 bits (19), Expect = 3.1
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 544 tgccagggaggactgataatgagatcaagaa 574
|||||||| | ||||| ||||||||||||||
Sbjct: 515 tgccagggcgcactgacaatgagatcaagaa 485
>gb|CW377249.1|CW377249 fsbb001f055h19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f055h19, DNA
sequence
Length = 705
Score = 38.2 bits (19), Expect = 3.1
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 544 tgccagggaggactgataatgagatcaagaa 574
|||||||| | ||||| ||||||||||||||
Sbjct: 340 tgccagggcgcactgacaatgagatcaagaa 370
>gb|CW377250.1|CW377250 fsbb001f055h19k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f055h19, DNA
sequence
Length = 706
Score = 38.2 bits (19), Expect = 3.1
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 544 tgccagggaggactgataatgagatcaagaa 574
|||||||| | ||||| ||||||||||||||
Sbjct: 633 tgccagggcgcactgacaatgagatcaagaa 603
>gb|CW477238.1|CW477238 fsbb001f234h18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f234h18, DNA
sequence
Length = 767
Score = 38.2 bits (19), Expect = 3.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1452 cagcagccacagcaacagc 1470
|||||||||||||||||||
Sbjct: 147 cagcagccacagcaacagc 129
>gb|AW285644.1|AW285644 LG1_319_E08.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 279
Score = 38.2 bits (19), Expect = 3.1
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 617 cattgatcccaacacccac 635
|||||||||||||||||||
Sbjct: 208 cattgatcccaacacccac 190
>gb|CX613908.1|CX613908 GABR1_10_H03.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_10_H03_A002 5', mRNA sequence
Length = 823
Score = 38.2 bits (19), Expect = 3.1
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 544 tgccagggaggactgataatgagatcaagaa 574
|||||||| | ||||| ||||||||||||||
Sbjct: 605 tgccagggcgcactgacaatgagatcaagaa 635
>gb|CX614961.1|CX614961 GABR1_17_G10.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_17_G10_A002 3', mRNA sequence
Length = 746
Score = 38.2 bits (19), Expect = 3.1
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 544 tgccagggaggactgataatgagatcaagaa 574
|||||||| | ||||| ||||||||||||||
Sbjct: 27 tgccagggcgcactgacaatgagatcaagaa 57
>gb|CX615050.1|CX615050 GABR1_17_G10.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_17_G10_A002 5', mRNA sequence
Length = 791
Score = 38.2 bits (19), Expect = 3.1
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 544 tgccagggaggactgataatgagatcaagaa 574
|||||||| | ||||| ||||||||||||||
Sbjct: 472 tgccagggcgcactgacaatgagatcaagaa 502
>gb|CX622870.1|CX622870 GABR1_66_A07.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_66_A07_A002 5', mRNA sequence
Length = 675
Score = 38.2 bits (19), Expect = 3.1
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 544 tgccagggaggactgataatgagatcaagaa 574
|||||||| | ||||| ||||||||||||||
Sbjct: 500 tgccagggcgcactgacaatgagatcaagaa 530
>gb|AF474126.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb12) gene, partial
cds
Length = 2020
Score = 38.2 bits (19), Expect = 3.1
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 488 catcatcgagctgcacgctgtcctcgggaacaggtggtc 526
||||||| |||||||| | ||| |||| |||||||||||
Sbjct: 1754 catcatcaagctgcactccgtcgtcggcaacaggtggtc 1792
Database: Sorghum_nucl_with_EST.fasta
Posted date: May 2, 2006 3:37 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 586,424
Number of Sequences: 832831
Number of extensions: 586424
Number of successful extensions: 169207
Number of sequences better than 10.0: 141
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 168772
Number of HSP's gapped (non-prelim): 342
length of query: 1992
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1972
effective length of database: 474,703,049
effective search space: 936114412628
effective search space used: 936114412628
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)