BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAE23e10.yg.3.1
(2083 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW672381.1|AW672381 LG1_359_H10.b1_A002 Light Grown 1 (L... 1104 0.0
gb|CD203940.1|CD203940 HS1_2_C02.g1_A012 Heat-shocked seedl... 1072 0.0
gb|CF770714.1|CF770714 DSBF1_9_G11.b1_A010 Drought-stressed... 924 0.0
gb|BM324485.1|BM324485 PIC1_31_G10.b1_A002 Pathogen-infecte... 922 0.0
gb|BG356567.1|BG356567 EM1_24_A10.g1_A002 Embryo 1 (EM1) So... 906 0.0
gb|BG322574.1|BG322574 EM1_36_F04.b1_A002 Embryo 1 (EM1) So... 862 0.0
gb|BF177135.1|BF177135 EM1_2_C01.b1_A002 Embryo 1 (EM1) Sor... 860 0.0
gb|BM323132.1|BM323132 PIC1_8_C01.b1_A002 Pathogen-infected... 823 0.0
gb|CD228851.1|CD228851 CCC1_10_H09.b1_A007 Callus culture/c... 809 0.0
gb|CF486115.1|CF486115 POL1_35_G03.g1_A002 Pollen Sorghum b... 809 0.0
gb|BG560433.1|BG560433 RHIZ2_74_C10.b1_A003 Rhizome2 (RHIZ2... 797 0.0
gb|BG273599.1|BG273599 OV2_27_F10.b1_A002 Ovary 2 (OV2) Sor... 795 0.0
gb|CF770371.1|CF770371 DSBF1_7_H01.b1_A010 Drought-stressed... 785 0.0
gb|CF770797.1|CF770797 DSBF1_9_G11.g1_A010 Drought-stressed... 783 0.0
gb|BF177054.1|BF177054 EM1_3_A07.g1_A002 Embryo 1 (EM1) Sor... 777 0.0
gb|BZ694969.1|BZ694969 SP__Ba0056H24.f SP__Ba Sorghum propi... 763 0.0
gb|CW789294.1|CW789294 SP__Ba0056H24.f SP__Ba Sorghum propi... 761 0.0
gb|BG322785.1|BG322785 EM1_14_B10.b1_A002 Embryo 1 (EM1) So... 761 0.0
gb|BG559843.1|BG559843 RHIZ2_74_C10.g1_A003 Rhizome2 (RHIZ2... 753 0.0
gb|BE360730.1|BE360730 DG1_66_H06.g2_A002 Dark Grown 1 (DG1... 745 0.0
gb|BG322375.1|BG322375 EM1_24_A10.b1_A002 Embryo 1 (EM1) So... 724 0.0
gb|BM318539.1|BM318539 PI1_14_G05.b9_A002 Pathogen induced ... 722 0.0
gb|BM328971.1|BM328971 PIC1_31_G10.g1_A002 Pathogen-infecte... 720 0.0
gb|BG356261.1|BG356261 EM1_23_D07.b1_A002 Embryo 1 (EM1) So... 706 0.0
gb|BG411087.1|BG411087 EM1_25_F02.b1_A002 Embryo 1 (EM1) So... 700 0.0
gb|BG323038.1|BG323038 EM1_14_B10.g1_A002 Embryo 1 (EM1) So... 686 0.0
gb|BG273169.1|BG273169 OV2_27_F10.g1_A002 Ovary 2 (OV2) Sor... 656 0.0
gb|BG273436.1|BG273436 OV2_25_F11.b1_A002 Ovary 2 (OV2) Sor... 624 e-177
gb|BM327615.1|BM327615 PIC1_8_C01.g1_A002 Pathogen-infected... 583 e-164
gb|CW196301.1|CW196301 104_620_11181098_148_36815_011 Sorgh... 577 e-162
gb|CD203841.1|CD203841 HS1_2_C02.b1_A012 Heat-shocked seedl... 575 e-162
gb|BG051560.1|BG051560 FM1_58_A05.g1_A003 Floral-Induced Me... 557 e-156
gb|CW336249.1|CW336249 104_835_11483487_148_36098_056 Sorgh... 543 e-152
gb|BG356527.1|BG356527 EM1_23_D07.g1_A002 Embryo 1 (EM1) So... 523 e-146
gb|BG273302.1|BG273302 OV2_25_F11.g1_A002 Ovary 2 (OV2) Sor... 507 e-141
gb|BM322690.1|BM322690 PIC1_7_H04.b1_A002 Pathogen-infected... 490 e-136
gb|CW123292.1|CW123292 104_502_11111135_148_34685_088 Sorgh... 488 e-135
gb|CF757562.1|CF757562 DSAF1_19_E03.g1_A011 Drought-stresse... 462 e-128
gb|BE594254.1|BE594254 WS1_104_B08.b1_A002 Water-stressed 1... 458 e-126
gb|BG465323.1|BG465323 EM1_74_H06.g1_A002 Embryo 1 (EM1) So... 440 e-121
gb|BG410772.1|BG410772 EM1_25_F02.g1_A002 Embryo 1 (EM1) So... 438 e-121
gb|CD461526.1|CD461526 SA1_32_A12.g2_A002 Salicylic acid-tr... 430 e-118
gb|CF486037.1|CF486037 POL1_35_G03.b1_A002 Pollen Sorghum b... 428 e-118
gb|BF176826.1|BF176826 EM1_3_A07.b1_A002 Embryo 1 (EM1) Sor... 424 e-116
gb|CF483143.1|CF483143 POL1_12_C04.b1_A002 Pollen Sorghum b... 424 e-116
gb|CL158919.1|CL158919 104_348_10803882_116_31380_090 Sorgh... 414 e-113
gb|BG464950.1|BG464950 EM1_36_F04.g1_A002 Embryo 1 (EM1) So... 404 e-110
gb|CD228875.1|CD228875 CCC1_10_H09.g1_A007 Callus culture/c... 400 e-109
gb|CW336248.1|CW336248 104_835_11483487_116_36094_056 Sorgh... 396 e-108
gb|BF176990.1|BF176990 EM1_2_C01.g1_A002 Embryo 1 (EM1) Sor... 392 e-107
gb|CF483209.1|CF483209 POL1_12_C04.g1_A002 Pollen Sorghum b... 392 e-107
gb|BF481592.1|BF481592 FM1_20_A03.g1_A003 Floral-Induced Me... 379 e-103
gb|CF770452.1|CF770452 DSBF1_7_H01.g1_A010 Drought-stressed... 379 e-103
gb|BE593933.1|BE593933 WS1_104_B08.g1_A002 Water-stressed 1... 371 e-100
gb|CL181222.1|CL181222 104_391_10896587_148_31927_347 Sorgh... 369 e-100
gb|CW196300.1|CW196300 104_620_11181098_116_36816_011 Sorgh... 367 3e-099
gb|AW745879.1|AW745879 WS1_38_A09.b1_A002 Water-stressed 1 ... 337 2e-090
gb|AW745996.1|AW745996 WS1_38_A09.g1_A002 Water-stressed 1 ... 335 1e-089
gb|BM327586.1|BM327586 PIC1_7_H04.g1_A002 Pathogen-infected... 335 1e-089
gb|CW456413.1|CW456413 fsbb001f201l22k0 Sorghum methylation... 297 2e-078
gb|CW454680.1|CW454680 fsbb001f199e03f0 Sorghum methylation... 289 5e-076
gb|CF760864.1|CF760864 DSAF1_67_G03.b1_A011 Drought-stresse... 264 3e-068
gb|CF771538.1|CF771538 DSBF1_20_G05.g1_A010 Drought-stresse... 264 3e-068
gb|CW123291.1|CW123291 104_502_11111135_116_34689_088 Sorgh... 262 1e-067
gb|BE360657.1|BE360657 DG1_66_H06.b2_A002 Dark Grown 1 (DG1... 240 4e-061
gb|CL158714.1|CL158714 104_347_10803727_116_31378_319 Sorgh... 234 3e-059
gb|CW027527.1|CW027527 104_254_10498568_116_30396 Sorghum m... 234 3e-059
gb|BE126182.1|BE126182 DG1_66_H06.b1_A002 Dark Grown 1 (DG1... 200 4e-049
gb|CW027526.1|CW027526 104_254_10498568_114_30395 Sorghum m... 194 2e-047
gb|CL181221.1|CL181221 104_391_10896587_116_31928_347 Sorgh... 184 2e-044
gb|CF769401.1|CF769401 DSBF1_1_H08.b1_A010 Drought-stressed... 180 3e-043
gb|CW292190.1|CW292190 104_772_11413953_148_35583_045 Sorgh... 174 2e-041
gb|CW292189.1|CW292189 104_772_11413953_116_35579_045 Sorgh... 165 2e-038
gb|CF486910.1|CF486910 POL1_40_C09.g1_A002 Pollen Sorghum b... 151 3e-034
gb|BF481756.1|BF481756 FM1_20_A03.b1_A003 Floral-Induced Me... 147 5e-033
gb|BF481253.1|BF481253 FM1_17_E04.b1_A003 Floral-Induced Me... 115 2e-023
gb|CW279164.1|CW279164 104_753_11406932_116_35426_066 Sorgh... 94 6e-017
gb|CW292133.1|CW292133 104_772_11413923_116_35577_014 Sorgh... 94 6e-017
gb|CW475320.1|CW475320 fsbb001f231j23k0 Sorghum methylation... 94 6e-017
gb|CL158713.1|CL158713 104_347_10803727_114_31377_319 Sorgh... 86 2e-014
gb|CL158918.1|CL158918 104_348_10803882_114_31379_090 Sorgh... 78 4e-012
gb|CW180601.1|CW180601 104_595_11163038_148_36644_059 Sorgh... 78 4e-012
gb|CW279165.1|CW279165 104_753_11406932_148_35430_066 Sorgh... 70 9e-010
gb|CW225284.1|CW225284 104_662_11204269_148_37200_049 Sorgh... 58 3e-006
gb|CW475319.1|CW475319 fsbb001f231j23f0 Sorghum methylation... 58 3e-006
gb|BM329176.1|BM329176 PIC1_34_D03.g1_A002 Pathogen-infecte... 56 1e-005
gb|CW048497.1|CW048497 104_287_10513424_114_30211 Sorghum m... 50 8e-004
gb|CW421628.1|CW421628 fsbb001f130i15k0 Sorghum methylation... 42 0.20
>gb|AW672381.1|AW672381 LG1_359_H10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 661
Score = 1104 bits (557), Expect = 0.0
Identities = 629/653 (96%)
Strand = Plus / Plus
Query: 370 gtggattctgatttggagctgaactacgggaggcgatacggtttgcttgggttgaatggc 429
||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 9 gtggattctgagttggagctgaactatggaaggcgatacggtttgcttgggttgaatggc 68
Query: 430 tgtggaaaatctactcttctcacagcaataggctgcagagaacttcctatccctgaacac 489
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 tgtgggaaatctactcttctcacagcaataggctgcagagaacttcctatccctgaacac 128
Query: 490 atggacatataccatctaagccatgagattgaagcttctgacatgtctgcactgcaagcc 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggacatataccatctaagccatgagattgaagcttctgacatgtctgcactgcaagcc 188
Query: 550 attgttagttgtgacgaagaaagagtgaagttggaaaaggaagctgaaattttggctgca 609
|||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 189 gttgttacttgtgacgaagaaagagtaaagttggaaaaggaagctgaaattttggctgca 248
Query: 610 caggatgatggtggtggtgaagcattggagcgtgtttatgagcgtctagatgcaatggat 669
||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 249 caggatgatggtggtggcgaagcactggatcgtgtttatgagcgtctagatgcaatggat 308
Query: 670 gctggaactgcagaaaagcgagctgctgaaattttatttggtctgggttttgacaaacaa 729
|||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||| ||
Sbjct: 309 gctggaactgcagaaaagcgagctgctgaaatattattcggtctgggttttaacaaagaa 368
Query: 730 atgcaagcaaagaaaactaaagatttctctggaggttggcgtatgaggattgctttagca 789
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 369 atgcaggcaaagaaaactaaagatttctctggaggttggcgtatgaggattgctttggcg 428
Query: 790 agagcactgtttatgaatccaacaatccttttgcttgatgagcccacaaaccatctagat 849
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 429 agagcactgtttatgaatccaacaatccttttgcttgatgagccaacaaaccatctagat 488
Query: 850 cttgaggcttgtgtctggttggaagagacactgaagaaatttgaccgcatacttgttgtc 909
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 489 cttgaagcttgtgtctggttggaagagacactaaagaaatttgaccgcatacttgttgtc 548
Query: 910 atatcacactcccaagattttctaaatggagtgtgtactaacattatccatatgcaaaac 969
||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| |
Sbjct: 549 atatcacactctcaagattttctaaacggagtgtgcactaacattatccatatgcaaagc 608
Query: 970 aagaagctcaagttatacaccggtaactacgatcagtatgttcaaactcgctc 1022
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 aagaagctcaagttatacaccggtaactacgatcagtatgttcaaactcgctc 661
>gb|CD203940.1|CD203940 HS1_2_C02.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_2_C02_A012 5', mRNA sequence
Length = 637
Score = 1072 bits (541), Expect = 0.0
Identities = 610/633 (96%)
Strand = Plus / Plus
Query: 887 aatttgaccgcatacttgttgtcatatcacactcccaagattttctaaatggagtgtgta 946
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |
Sbjct: 5 aatttgaccgcatacttgttgtcatatcacactctcaagattttctaaacggagtgtgca 64
Query: 947 ctaacattatccatatgcaaaacaagaagctcaagttatacaccggtaactacgatcagt 1006
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 65 ctaacattatccatatgcaaagcaagaagctcaagttatacaccggtaactacgatcagt 124
Query: 1007 atgttcaaactcgctccgatcttgaagagaatcaaatgaagcagtacaaatgggagcagg 1066
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 atgttcaaactcgctccgagcttgaagagaatcaaatgaagcagtacaaatgggagcagg 184
Query: 1067 aacagattgcttcaatgaaggagtacattgctcgcttcggtcatggttctgcaaagcttg 1126
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 185 aacagattgcatcaatgaaggagtacattgctcgtttcggtcatggttctgcaaagcttg 244
Query: 1127 ctcgtcaggctcagagcaaagagaaaactcttgcaaagatggagcgaggtggtctcaccg 1186
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 245 ctcgccaggctcagagcaaagagaaaactcttgcaaagatggagcgaggtggtctcactg 304
Query: 1187 agaaggttgttagggacagagttctagtgttcaggtttacagatgttggcaaacttcctc 1246
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 305 agaaggttgttagggacagagttctagtgttccggtttacagatgttggcaagcttcctc 364
Query: 1247 cacctgtgctgcagtttgttgaagtcaagtttgggtatacaccagataatctcatataca 1306
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cgcccgtgctgcagtttgttgaagtcaagtttgggtatacaccagataatctcatataca 424
Query: 1307 agagtcttgactttggagttgatcttgactctagaatcgcattggttggtcccaatggtg 1366
||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 425 agagtctggactttggtgttgatcttgactctagaatcgcattggttggtcccaatgggg 484
Query: 1367 cagggaagagcactcttctgaagcttatgactggtgaccttgctccattagatggcatgg 1426
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 485 cagggaagagcactcttctgaagcttatgactggtgatcttgttccattagatggcatgg 544
Query: 1427 ttcggcgccacaatcacctgcgcattgcacagtaccatcagcatcttgcggacaagctgg 1486
|||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 545 ttcggcgccataatcacctgcgcattgcacagtaccatcagcatctggcggagaagctgg 604
Query: 1487 atctggacatgccggctctggcttacatgatga 1519
||||||||||||| || ||||||||||||||||
Sbjct: 605 atctggacatgccagccctggcttacatgatga 637
>gb|CF770714.1|CF770714 DSBF1_9_G11.b1_A010 Drought-stressed before flowering Sorghum bicolor
cDNA clone DSBF1_9_G11_A010 5', mRNA sequence
Length = 542
Score = 924 bits (466), Expect = 0.0
Identities = 523/542 (96%)
Strand = Plus / Plus
Query: 976 ctcaagttatacaccggtaactacgatcagtatgttcaaactcgctccgatcttgaagag 1035
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 ctcaagttatacaccggtaactacgatcagtatgttcaaactcgctccgagcttgaagag 60
Query: 1036 aatcaaatgaagcagtacaaatgggagcaggaacagattgcttcaatgaaggagtacatt 1095
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61 aatcaaatgaagcagtacaaatgggagcaggaacagattgcatcaatgaaggagtacatt 120
Query: 1096 gctcgcttcggtcatggttctgcaaagcttgctcgtcaggctcagagcaaagagaaaact 1155
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 121 gctcgtttcggtcatggttctgcaaagcttgctcgccaggctcagagcaaagagaaaact 180
Query: 1156 cttgcaaagatggagcgaggtggtctcaccgagaaggttgttagggacagagttctagtg 1215
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 181 cttgcaaagatggagcgaggtggtctcactgagaaggttgttagggacagagttctagtg 240
Query: 1216 ttcaggtttacagatgttggcaaacttcctccacctgtgctgcagtttgttgaagtcaag 1275
||| ||||||||||||||||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 241 ttccggtttacagatgttggcaagcttcctccgcccgtgctgcagtttgttgaagtcaag 300
Query: 1276 tttgggtatacaccagataatctcatatacaagagtcttgactttggagttgatcttgac 1335
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 301 tttgggtatacaccagataatctcatatacaagagtctggactttggtgttgatcttgac 360
Query: 1336 tctagaatcgcattggttggtcccaatggtgcagggaagagcactcttctgaagcttatg 1395
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 361 tctagaatcgcattggttggtcccaatggggcagggaagagcactcttctgaagcttatg 420
Query: 1396 actggtgaccttgctccattagatggcatggttcggcgccacaatcacctgcgcattgca 1455
|||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 421 actggtgatcttgttccattagatggcatggttcggcgccataatcacctgcgcattgca 480
Query: 1456 cagtaccatcagcatcttgcggacaagctggatctggacatgccggctctggcttacatg 1515
||||||||||||||||| ||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 481 cagtaccatcagcatctggcggagaagctggatctggacatgccagccctggcttacatg 540
Query: 1516 at 1517
||
Sbjct: 541 at 542
>gb|BM324485.1|BM324485 PIC1_31_G10.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 549
Score = 922 bits (465), Expect = 0.0
Identities = 522/541 (96%)
Strand = Plus / Plus
Query: 337 ctttctttaacattccatgggcatgaccttattgtggattctgatttggagctgaactac 396
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 9 ctttctttaacattccatgggcatgaccttattgtggattctgagttggagctgaactat 68
Query: 397 gggaggcgatacggtttgcttgggttgaatggctgtggaaaatctactcttctcacagca 456
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 69 ggaaggcgatacggtttgcttgggttgaatggctgtgggaaatctactcttctcacagca 128
Query: 457 ataggctgcagagaacttcctatccctgaacacatggacatataccatctaagccatgag 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 ataggctgcagagaacttcctatccctgaacacatggacatataccatctaagccatgag 188
Query: 517 attgaagcttctgacatgtctgcactgcaagccattgttagttgtgacgaagaaagagtg 576
||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 189 attgaagcttctgacatgtctgcactgcaagccgttgttacttgtgacgaagaaagagta 248
Query: 577 aagttggaaaaggaagctgaaattttggctgcacaggatgatggtggtggtgaagcattg 636
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 249 aagttggaaaaggaagctgaaattttggctgcacaggatgatggtggtggcgaagcactg 308
Query: 637 gagcgtgtttatgagcgtctagatgcaatggatgctggaactgcagaaaagcgagctgct 696
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gatcgtgtttatgagcgtctagatgcaatggatgctggaactgcagaaaagcgagctgct 368
Query: 697 gaaattttatttggtctgggttttgacaaacaaatgcaagcaaagaaaactaaagatttc 756
||||| ||||| |||||||||||| ||||| ||||||| |||||||||||||||||||||
Sbjct: 369 gaaatattattcggtctgggttttaacaaagaaatgcaggcaaagaaaactaaagatttc 428
Query: 757 tctggaggttggcgtatgaggattgctttagcaagagcactgtttatgaatccaacaatc 816
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 429 tctggaggttggcgtatgaggattgctttggcgagagcactgtttatgaatccaacaatc 488
Query: 817 cttttgcttgatgagcccacaaaccatctagatcttgaggcttgtgtctggttggaagag 876
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 489 cttttgcttgatgagccaacaaaccatctagatcttgaagcttgtgtctggttggaagag 548
Query: 877 a 877
|
Sbjct: 549 a 549
>gb|BG356567.1|BG356567 EM1_24_A10.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 556
Score = 906 bits (457), Expect = 0.0
Identities = 533/557 (95%), Gaps = 1/557 (0%)
Strand = Plus / Plus
Query: 1389 gcttatgactggtgaccttgctccattagatggcatggttcggcgccacaatcacctgcg 1448
||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 gcttatgactggtgatcttgttccattagatggcatggttcggcgccataatcacctgcg 60
Query: 1449 cattgcacagtaccatcagcatcttgcggacaagctggatctggacatgccggctctggc 1508
|||||||||||||||||||||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 61 cattgcacagtaccatcagcatctggcggagaagctggatctggacatgccagccctggc 120
Query: 1509 ttacatgatgaaggaataccctgggaccgaagaagagaagatgcgagctgctgttggcag 1568
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 121 ttacatgatgaaggaataccctgggactgaagaagagaagatgcgagctgctgttggcag 180
Query: 1569 gtttggcctatcaggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaag 1628
||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 181 gtttggcctgtcaggaaaggcgcaggtgatgccgatgaagaatctttctgatgggcaaag 240
Query: 1629 gagccgtgtcatctttgcatggttggcatataggcagccgcaactgctactgctcgatga 1688
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 241 gagccgtgtcatctttgcatggctggcatataggcagccgcaactgctactgctcgatga 300
Query: 1689 gccgacaaatcatttggacattgagaccattgactccctggcggaggcactgaatgagtg 1748
||||||||| ||| |||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 301 gccgacaaaccatctggatattgagaccattgactccctggccgaggcactgaatgagtg 360
Query: 1749 ggatggtggtttggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaaga 1808
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggatggtggtttggttctagtgagccatgatttcaggctgatcaaccaggttgctcaaga 420
Query: 1809 gatttgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggatttcaa 1868
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gatctgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggatttcaa 480
Query: 1869 ggcacacttgaagagcaaggctggtttatctgattagagggctttttccagcaaccatga 1928
|||||||||||||||||||||||||||||||||||||| ||| || || |||||||||||
Sbjct: 481 ggcacacttgaagagcaaggctggtttatctgattagaaggc-ttgtctagcaaccatga 539
Query: 1929 gctttttaactctgtat 1945
|||||||||||||||||
Sbjct: 540 gctttttaactctgtat 556
>gb|BG322574.1|BG322574 EM1_36_F04.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 516
Score = 862 bits (435), Expect = 0.0
Identities = 489/507 (96%)
Strand = Plus / Plus
Query: 313 tcccgggatatccacatagagtctctttctttaacattccatgggcatgaccttattgtg 372
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 tcccgcgatatccacatagagtctctttctttaacattccatgggcatgaccttattgtg 69
Query: 373 gattctgatttggagctgaactacgggaggcgatacggtttgcttgggttgaatggctgt 432
|||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 70 gattctgagttggagctgaactatggaaggcgatacggtttgcttgggttgaatggctgt 129
Query: 433 ggaaaatctactcttctcacagcaataggctgcagagaacttcctatccctgaacacatg 492
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gggaaatctactcttctcacagcaataggctgcagagaacttcctatccctgaacacatg 189
Query: 493 gacatataccatctaagccatgagattgaagcttctgacatgtctgcactgcaagccatt 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 190 gacatataccatctaagccatgagattgaagcttctgacatgtctgcactgcaagccgtt 249
Query: 553 gttagttgtgacgaagaaagagtgaagttggaaaaggaagctgaaattttggctgcacag 612
|||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 250 gttacttgtgacgaagaaagagtaaagttggaaaaggaagctgaaattttggctgcacag 309
Query: 613 gatgatggtggtggtgaagcattggagcgtgtttatgagcgtctagatgcaatggatgct 672
|||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 310 gatgatggtggtggcgaagcactggatcgtgtttatgagcgtctagatgcaatggatgct 369
Query: 673 ggaactgcagaaaagcgagctgctgaaattttatttggtctgggttttgacaaacaaatg 732
||||||||||||||||||||||||||||| ||||| |||||||||||| ||||| |||||
Sbjct: 370 ggaactgcagaaaagcgagctgctgaaatattattcggtctgggttttaacaaagaaatg 429
Query: 733 caagcaaagaaaactaaagatttctctggaggttggcgtatgaggattgctttagcaaga 792
|| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 430 caggcaaagaaaactaaagatttctctggaggttggcgtatgaggattgctttggcgaga 489
Query: 793 gcactgtttatgaatccaacaatcctt 819
|||||||||||||||||||||||||||
Sbjct: 490 gcactgtttatgaatccaacaatcctt 516
>gb|BF177135.1|BF177135 EM1_2_C01.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 532
Score = 860 bits (434), Expect = 0.0
Identities = 499/521 (95%)
Strand = Plus / Plus
Query: 313 tcccgggatatccacatagagtctctttctttaacattccatgggcatgaccttattgtg 372
||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 tcccgcgatatccacataaggtctctttctttaacattccatgggcatgaccttattgtg 69
Query: 373 gattctgatttggagctgaactacgggaggcgatacggtttgcttgggttgaatggctgt 432
|||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 70 gattctgagttggagctgaactatggaaggcgatacggtttgcttgggttgaatggctgt 129
Query: 433 ggaaaatctactcttctcacagcaataggctgcagagaacttcctatccctgaacacatg 492
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gggaaatctactcttctcacagcaataggctgcagagaacttcctatccctgaacacatg 189
Query: 493 gacatataccatctaagccatgagattgaagcttctgacatgtctgcactgcaagccatt 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 190 gacatataccatctaagccatgagattgaagcttctgacatgtctgcactgcaagccgtt 249
Query: 553 gttagttgtgacgaagaaagagtgaagttggaaaaggaagctgaaattttggctgcacag 612
|||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 250 gttacttgtgacgaagaaagagtaaagttggaaaaggaagctgaaattttggctgcacag 309
Query: 613 gatgatggtggtggtgaagcattggagcgtgtttatgagcgtctagatgcaatggatgct 672
|||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 310 gatgatggtggtggcgaagcactggatcgtgtttatgagcgtctagatgcaatggatgct 369
Query: 673 ggaactgcagaaaagcgagctgctgaaattttatttggtctgggttttgacaaacaaatg 732
||||||||||||||||||||||||||||| ||||| |||||||||||| ||||| |||||
Sbjct: 370 ggaactgcagaaaagcgagctgctgaaatattattcggtctgggttttaacaaagaaatg 429
Query: 733 caagcaaagaaaactaaagatttctctggaggttggcgtatgaggattgctttagcaaga 792
|| ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 430 caggcaaagagaactaaagatttctctggaggttggcgtatgaggattgctttggcgaga 489
Query: 793 gcactgtttatgaatccaacaatccttttgcttgatgagcc 833
||||||||||||||||||||||||||| |||||||||||||
Sbjct: 490 gcactgtttatgaatccaacaatccttntgcttgatgagcc 530
>gb|BM323132.1|BM323132 PIC1_8_C01.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 500
Score = 823 bits (415), Expect = 0.0
Identities = 472/491 (96%)
Strand = Plus / Plus
Query: 558 ttgtgacgaagaaagagtgaagttggaaaaggaagctgaaattttggctgcacaggatga 617
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 ttgtgacgaagaaagagtaaagttggaaaaggaagctgaaattttggctgcacaggatga 69
Query: 618 tggtggtggtgaagcattggagcgtgtttatgagcgtctagatgcaatggatgctggaac 677
||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 70 tggtggtggcgaagcactggatcgtgtttatgagcgtctagatgcaatggatgctggaac 129
Query: 678 tgcagaaaagcgagctgctgaaattttatttggtctgggttttgacaaacaaatgcaagc 737
|||||||||||||||||||||||| ||||| |||||||||||| ||||| ||||||| ||
Sbjct: 130 tgcagaaaagcgagctgctgaaatattattcggtctgggttttaacaaagaaatgcaggc 189
Query: 738 aaagaaaactaaagatttctctggaggttggcgtatgaggattgctttagcaagagcact 797
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 190 aaagaaaactaaagatttctctggaggttggcgtatgaggattgctttggcgagagcact 249
Query: 798 gtttatgaatccaacaatccttttgcttgatgagcccacaaaccatctagatcttgaggc 857
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 250 gtttatgaatccaacaatccttttgcttgatgagccaacaaaccatctagatcttgaagc 309
Query: 858 ttgtgtctggttggaagagacactgaagaaatttgaccgcatacttgttgtcatatcaca 917
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 310 ttgtgtctggttggaagagacactaaagaaatttgaccgcatacttgttgtcatatcaca 369
Query: 918 ctcccaagattttctaaatggagtgtgtactaacattatccatatgcaaaacaagaagct 977
||| |||||||||||||| |||||||| |||||||||||||||||||||| |||||||||
Sbjct: 370 ctctcaagattttctaaacggagtgtgcactaacattatccatatgcaaagcaagaagct 429
Query: 978 caagttatacaccggtaactacgatcagtatgttcaaactcgctccgatcttgaagagaa 1037
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 430 caagttatacaccggtaactacgatcagtatgttcaaactcgctccgagcttgaagagaa 489
Query: 1038 tcaaatgaagc 1048
|||||||||||
Sbjct: 490 tcaaatgaagc 500
>gb|CD228851.1|CD228851 CCC1_10_H09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_10_H09_A007 3', mRNA sequence
Length = 664
Score = 809 bits (408), Expect = 0.0
Identities = 497/524 (94%), Gaps = 2/524 (0%)
Strand = Plus / Plus
Query: 1480 aagctggatctggacatgccggctctggcttacatgatgaaggaataccctgggaccgaa 1539
|||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||
Sbjct: 4 aagctggatctggacatgccagccctggcttacatgatgaaggaataccctgggactgaa 63
Query: 1540 gaagagaagatgcgagctgctgttggcaggtttggcctatcaggaaaggcgcaggtgatg 1599
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 64 gaagagaagatgcgagctgctgttggcaggtttggcctgtcaggaaaggcgcaggtgatg 123
Query: 1600 ccaatgaggaatctttctgatgggcaaaggagccgtgtcatctttgcatggttggcatat 1659
|| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 124 ccgatgaagaatctttctgatgggcaaaggagccgtgtcatctttgcatggctggcatat 183
Query: 1660 aggcagccgcaactgctactgctcgatgagccgacaaatcatttggacattgagaccatt 1719
|||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||
Sbjct: 184 aggcagccgcaactgctactgctcgatgagccgacaaaccatctggatattgagaccatt 243
Query: 1720 gactccctggcggaggcactgaatgagtgggatggtggtttggtcttggtgagccatgat 1779
||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 244 gactccctggccgaggcactgaatgagtgggatggtggtttggttctagtgagccatgat 303
Query: 1780 ttcaggctgatcaaccaggttgctcaagagatttgggtgtgtgagaatcaggcggtgaca 1839
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 304 ttcaggctgatcaaccaggttgctcaagagatctgggtgtgtgagaatcaggcggtgaca 363
Query: 1840 aggtgggaaggtgatatcatggatttcaaggcacacttgaagagcaaggctggtttatct 1899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aggtgggaaggtgatatcatggatttcaaggcacacttgaagagcaaggctggtttatct 423
Query: 1900 gattagagggctttttccagcaaccatgagctttttaactctgtatcacgaagtcccagt 1959
||||||| ||| || || |||||||||||||||||||||||||||||||||||||| | |
Sbjct: 424 gattagaaggc-ttgtctagcaaccatgagctttttaactctgtatcacgaagtcctatt 482
Query: 1960 tttccaatagcgaactatcagagttact-ttattgtatcggatt 2002
|||||| |||| ||||||| ||| |||| ||||||||||||||
Sbjct: 483 tttccagtagcaaactatcggagatactgctattgtatcggatt 526
Score = 77.8 bits (39), Expect = 4e-012
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 2029 taccttatactacctggaatatttatttatata-tcttttgaaatgctattatgt 2082
|||||||||||||||||||| |||||||||||| | |||||||||||||||||||
Sbjct: 560 taccttatactacctggaatgtttatttatatatttttttgaaatgctattatgt 614
>gb|CF486115.1|CF486115 POL1_35_G03.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_G03_A002 5', mRNA sequence
Length = 615
Score = 809 bits (408), Expect = 0.0
Identities = 453/468 (96%)
Strand = Plus / Plus
Query: 953 ttatccatatgcaaaacaagaagctcaagttatacaccggtaactacgatcagtatgttc 1012
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ttatccatatgcaaagcaagaagctcaagttatacaccggtaactacgatcagtatgttc 63
Query: 1013 aaactcgctccgatcttgaagagaatcaaatgaagcagtacaaatgggagcaggaacaga 1072
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aaactcgctccgagcttgaagagaatcaaatgaagcagtacaaatgggagcaggaacaga 123
Query: 1073 ttgcttcaatgaaggagtacattgctcgcttcggtcatggttctgcaaagcttgctcgtc 1132
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 124 ttgcatcaatgaaggagtacattgctcgtttcggtcatggttctgcaaagcttgctcgcc 183
Query: 1133 aggctcagagcaaagagaaaactcttgcaaagatggagcgaggtggtctcaccgagaagg 1192
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 184 aggctcagagcaaagagaaaactcttgcaaagatggagcgaggtggtctcactgagaagg 243
Query: 1193 ttgttagggacagagttctagtgttcaggtttacagatgttggcaaacttcctccacctg 1252
|||||||||||||||||||||||||| ||||||||||||||||||| |||||||| || |
Sbjct: 244 ttgttagggacagagttctagtgttccggtttacagatgttggcaagcttcctccgcccg 303
Query: 1253 tgctgcagtttgttgaagtcaagtttgggtatacaccagataatctcatatacaagagtc 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tgctgcagtttgttgaagtcaagtttgggtatacaccagataatctcatatacaagagtc 363
Query: 1313 ttgactttggagttgatcttgactctagaatcgcattggttggtcccaatggtgcaggga 1372
| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 364 tggactttggtgttgatcttgactctagaatcgcattggttggtcccaatggggcaggga 423
Query: 1373 agagcactcttctgaagcttatgactggtgaccttgctccattagatg 1420
||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 424 agagcactcttctgaagcttatgactggtgatcttgttccattagatg 471
Score = 238 bits (120), Expect = 2e-060
Identities = 141/148 (95%)
Strand = Plus / Plus
Query: 1596 gatgccaatgaggaatctttctgatgggcaaaggagccgtgtcatctttgcatggttggc 1655
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 468 gatgccgatgaagaatctttctgatgggcaaaggagccgtgtcatctttgcatggctggc 527
Query: 1656 atataggcagccgcaactgctactgctcgatgagccgacaaatcatttggacattgagac 1715
|||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||
Sbjct: 528 atataggcagccgcaactgctactgctcgatgagccgacaaaccatctggatattgagac 587
Query: 1716 cattgactccctggcggaggcactgaat 1743
||||||||||||||| ||||||||||||
Sbjct: 588 cattgactccctggccgaggcactgaat 615
>gb|BG560433.1|BG560433 RHIZ2_74_C10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 588
Score = 797 bits (402), Expect = 0.0
Identities = 471/494 (95%)
Strand = Plus / Plus
Query: 110 tcgacgccatggtgtcggatgccagcaagaagaaggccgcccagaagaaggccgctgcgg 169
||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||
Sbjct: 95 tcgacgccatggtgtcggaggccagcaagaagaaggccgctcagaagaaggccgccgcgg 154
Query: 170 ctgccaagaggggaggcaaggcctcggtggcgtcctcgtcgtcttcgtctgcggccgcgg 229
| || |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||
Sbjct: 155 ccgcgaagaggggaggcaaggccgcggtggcgtcctcatcgtcttcatctgcggccgcgg 214
Query: 230 ccgtcgataaggtggcgaacggcgtcgtggcgcttaagctatcggaccggacctgcaccg 289
||| |||||||| |||||||||||||| |||||| |||||||| ||||| ||||||||||
Sbjct: 215 ccgccgataaggcggcgaacggcgtcgcggcgctcaagctatcagaccgcacctgcaccg 274
Query: 290 gggtcctcgcgtctcacccgctttcccgggatatccacatagagtctctttctttaacat 349
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 275 gggtcctcgcgtctcacccgctctcccgcgatatccacatagagtctctttctttaacat 334
Query: 350 tccatgggcatgaccttattgtggattctgatttggagctgaactacgggaggcgatacg 409
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 335 tccatgggcatgaccttattgtggattctgagttggagctgaactatgggaggcgatacg 394
Query: 410 gtttgcttgggttgaatggctgtggaaaatctactcttctcacagcaataggctgcagag 469
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 395 gtttgcttgggttgaatggctgtgggaaatctactcttctcacagcaataggctgcagag 454
Query: 470 aacttcctatccctgaacacatggacatataccatctaagccatgagattgaagcttctg 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aacttcctatccctgaacacatggacatataccatctaagccatgagattgaagcttctg 514
Query: 530 acatgtctgcactgcaagccattgttagttgtgacgaagaaagagtgaagttggaaaagg 589
|||||||||||||||||||| |||||| |||||||||||||||||| | |||||||||||
Sbjct: 515 acatgtctgcactgcaagccgttgttacttgtgacgaagaaagagtaatgttggaaaagg 574
Query: 590 aagctgaaattttg 603
||||||||||||||
Sbjct: 575 aagctgaaattttg 588
>gb|BG273599.1|BG273599 OV2_27_F10.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 475
Score = 795 bits (401), Expect = 0.0
Identities = 455/473 (96%)
Strand = Plus / Plus
Query: 1410 tccattagatggcatggttcggcgccacaatcacctgcgcattgcacagtaccatcagca 1469
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3 tccattagatggcatggttcggcgccataatcacctgcgcattgcacagtaccatcagca 62
Query: 1470 tcttgcggacaagctggatctggacatgccggctctggcttacatgatgaaggaataccc 1529
||| ||||| |||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 63 tctggcggagaagctggatctggacatgccagccctggcttacatgatgaaggaataccc 122
Query: 1530 tgggaccgaagaagagaagatgcgagctgctgttggcaggtttggcctatcaggaaaggc 1589
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 123 tgggactgaagaagagaagatgcgagctgctgttggcaggtttggcctgtcaggaaaggc 182
Query: 1590 gcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtcatctttgcatg 1649
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gcaggtgatgccgatgaagaatctttctgatgggcaaaggagccgtgtcatctttgcatg 242
Query: 1650 gttggcatataggcagccgcaactgctactgctcgatgagccgacaaatcatttggacat 1709
| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||
Sbjct: 243 gctggcatataggcagccgcaactgctactgctcgatgagccgacaaaccatctggatat 302
Query: 1710 tgagaccattgactccctggcggaggcactgaatgagtgggatggtggtttggtcttggt 1769
||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||
Sbjct: 303 tgagaccattgactccctggccgaggcactgaatgagtgggatggtggtttggttctagt 362
Query: 1770 gagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgtgtgagaatca 1829
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 363 gagccatgatttcaggctgatcaaccaggttgctcaagagatctgggtgtgtgagaatca 422
Query: 1830 ggcggtgacaaggtgggaaggtgatatcatggatttcaaggcacacttgaaga 1882
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ggcggtgacaaggtgggaaggtgatatcatggatttcaaggcacacttgaaga 475
>gb|CF770371.1|CF770371 DSBF1_7_H01.b1_A010 Drought-stressed before flowering Sorghum bicolor
cDNA clone DSBF1_7_H01_A010 5', mRNA sequence
Length = 452
Score = 785 bits (396), Expect = 0.0
Identities = 438/452 (96%)
Strand = Plus / Plus
Query: 976 ctcaagttatacaccggtaactacgatcagtatgttcaaactcgctccgatcttgaagag 1035
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 ctcaagttatacaccggtaactacgatcagtatgttcaaactcgctccgagcttgaagag 60
Query: 1036 aatcaaatgaagcagtacaaatgggagcaggaacagattgcttcaatgaaggagtacatt 1095
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61 aatcaaatgaagcagtacaaatgggagcaggaacagattgcatcaatgaaggagtacatt 120
Query: 1096 gctcgcttcggtcatggttctgcaaagcttgctcgtcaggctcagagcaaagagaaaact 1155
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 121 gctcgtttcggtcatggttctgcaaagcttgctcgccaggctcagagcaaagagaaaact 180
Query: 1156 cttgcaaagatggagcgaggtggtctcaccgagaaggttgttagggacagagttctagtg 1215
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 181 cttgcaaagatggagcgaggtggtctcactgagaaggttgttagggacagagttctagtg 240
Query: 1216 ttcaggtttacagatgttggcaaacttcctccacctgtgctgcagtttgttgaagtcaag 1275
||| ||||||||||||||||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 241 ttccggtttacagatgttggcaagcttcctccgcccgtgctgcagtttgttgaagtcaag 300
Query: 1276 tttgggtatacaccagataatctcatatacaagagtcttgactttggagttgatcttgac 1335
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 301 tttgggtatacaccagataatctcatatacaagagtctggactttggtgttgatcttgac 360
Query: 1336 tctagaatcgcattggttggtcccaatggtgcagggaagagcactcttctgaagcttatg 1395
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 361 tctagaatcgcattggttggtcccaatggggcagggaagagcactcttctgaagcttatg 420
Query: 1396 actggtgaccttgctccattagatggcatggt 1427
|||||||| |||| ||||||||||||||||||
Sbjct: 421 actggtgatcttgttccattagatggcatggt 452
>gb|CF770797.1|CF770797 DSBF1_9_G11.g1_A010 Drought-stressed before flowering Sorghum bicolor
cDNA clone DSBF1_9_G11_A010 3', mRNA sequence
Length = 717
Score = 783 bits (395), Expect = 0.0
Identities = 484/511 (94%), Gaps = 2/511 (0%)
Strand = Plus / Plus
Query: 1493 acatgccggctctggcttacatgatgaaggaataccctgggaccgaagaagagaagatgc 1552
||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 acatgccagccctggcttacatgatgaaggaataccctgggactgaagaagagaagatgc 60
Query: 1553 gagctgctgttggcaggtttggcctatcaggaaaggcgcaggtgatgccaatgaggaatc 1612
||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||
Sbjct: 61 gagctgctgttggcaggtttggcctgtcaggaaaggcgcaggtgatgccgatgaagaatc 120
Query: 1613 tttctgatgggcaaaggagccgtgtcatctttgcatggttggcatataggcagccgcaac 1672
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 121 tttctgatgggcaaaggagccgtgtcatctttgcatggctggcatataggcagccgcaac 180
Query: 1673 tgctactgctcgatgagccgacaaatcatttggacattgagaccattgactccctggcgg 1732
||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||| |
Sbjct: 181 tgctactgctcgatgagccgacaaaccatctggatattgagaccattgactccctggccg 240
Query: 1733 aggcactgaatgagtgggatggtggtttggtcttggtgagccatgatttcaggctgatca 1792
||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 241 aggcactgaatgagtgggatggtggtttggttctagtgagccatgatttcaggctgatca 300
Query: 1793 accaggttgctcaagagatttgggtgtgtgagaatcaggcggtgacaaggtgggaaggtg 1852
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 accaggttgctcaagagatctgggtgtgtgagaatcaggcggtgacaaggtgggaaggtg 360
Query: 1853 atatcatggatttcaaggcacacttgaagagcaaggctggtttatctgattagagggctt 1912
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 361 atatcatggatttcaaggcacacttgaagagcaaggctggtttatctgattagaaggc-t 419
Query: 1913 tttccagcaaccatgagctttttaactctgtatcacgaagtcccagttttccaatagcga 1972
| || |||||||||||||||||||||||||||||||||||||| | ||||||| |||| |
Sbjct: 420 tgtctagcaaccatgagctttttaactctgtatcacgaagtcctatttttccagtagcaa 479
Query: 1973 actatcagagttact-ttattgtatcggatt 2002
|||||| ||| |||| ||||||||||||||
Sbjct: 480 actatcggagatactgctattgtatcggatt 510
Score = 77.8 bits (39), Expect = 4e-012
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 2029 taccttatactacctggaatatttatttatata-tcttttgaaatgctattatgt 2082
|||||||||||||||||||| |||||||||||| | |||||||||||||||||||
Sbjct: 544 taccttatactacctggaatgtttatttatatatttttttgaaatgctattatgt 598
>gb|BF177054.1|BF177054 EM1_3_A07.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 650
Score = 777 bits (392), Expect = 0.0
Identities = 475/500 (95%), Gaps = 2/500 (0%)
Strand = Plus / Plus
Query: 1504 ctggcttacatgatgaaggaataccctgggaccgaagaagagaagatgcgagctgctgtt 1563
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 3 ctggcttacatgatgaaggaataccctgggactgaagaagagaagatgcgagctgctgtt 62
Query: 1564 ggcaggtttggcctatcaggaaaggcgcaggtgatgccaatgaggaatctttctgatggg 1623
|||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 63 ggcaggtttggcctgtcaggaaaggcgcaggtgatgccgatgaagaatctttctgatggg 122
Query: 1624 caaaggagccgtgtcatctttgcatggttggcatataggcagccgcaactgctactgctc 1683
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 123 caaaggagccgtgtcatctttgcatggctggcatataggcagccgcaactgctactgctc 182
Query: 1684 gatgagccgacaaatcatttggacattgagaccattgactccctggcggaggcactgaat 1743
|||||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 183 gatgagccgacaaaccatctggatattgagaccattgactccctggccgaggcactgaat 242
Query: 1744 gagtgggatggtggtttggtcttggtgagccatgatttcaggctgatcaaccaggttgct 1803
|||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 243 gagtgggatggtggtttggttctagtgagccatgatttcaggctgatcaaccaggttgct 302
Query: 1804 caagagatttgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggat 1863
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 caagagatctgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggat 362
Query: 1864 ttcaaggcacacttgaagagcaaggctggtttatctgattagagggctttttccagcaac 1923
||||||||||||||||||||||||||||||||||||||||||| ||| || || ||||||
Sbjct: 363 ttcaaggcacacttgaagagcaaggctggtttatctgattagaaggc-ttgtctagcaac 421
Query: 1924 catgagctttttaactctgtatcacgaagtcccagttttccaatagcgaactatcagagt 1983
|||||||||||||||||||||||||||||||| | ||||||| |||| ||||||| |||
Sbjct: 422 catgagctttttaactctgtatcacgaagtcctatttttccagtagcaaactatcggaga 481
Query: 1984 tact-ttattgtatcggatt 2002
|||| ||||||||||||||
Sbjct: 482 tactgctattgtatcggatt 501
Score = 77.8 bits (39), Expect = 4e-012
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 2029 taccttatactacctggaatatttatttatata-tcttttgaaatgctattatgt 2082
|||||||||||||||||||| |||||||||||| | |||||||||||||||||||
Sbjct: 535 taccttatactacctggaatgtttatttatatatttttttgaaatgctattatgt 589
>gb|BZ694969.1|BZ694969 SP__Ba0056H24.f SP__Ba Sorghum propinquum genomic clone SP__Ba0056H24
5', DNA sequence
Length = 558
Score = 763 bits (385), Expect = 0.0
Identities = 491/525 (93%), Gaps = 1/525 (0%)
Strand = Plus / Plus
Query: 1387 aagcttatgactggtgaccttgctccattagatggcatggttcggcgccacaatcacctg 1446
|||||||||| ||||| |||| |||||||||||||||||||||||| |||||||||
Sbjct: 29 aagcttatgatcggtgatcttgaaacattagatggcatggttcggcgcct-aatcacctg 87
Query: 1447 cgcattgcacagtaccatcagcatcttgcggacaagctggatctggacatgccggctctg 1506
||||||| | |||||||||||||| ||||| |||||||||||||||||| | || |||
Sbjct: 88 cgcattgttccctaccatcagcatctggcggagaagctggatctggacatgtcagccctg 147
Query: 1507 gcttacatgatgaaggaataccctgggaccgaagaagagaagatgcgagctgctgttggc 1566
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 148 gcttacatgatgaaggaatacgctgggaccgaagaagagaagatgcgagccgctgttggc 207
Query: 1567 aggtttggcctatcaggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaa 1626
||||||||||| ||||||||||||||||||||||| |||| |||||| ||||||||||||
Sbjct: 208 aggtttggcctgtcaggaaaggcgcaggtgatgccgatgaagaatctctctgatgggcaa 267
Query: 1627 aggagccgtgtcatctttgcatggttggcatataggcagccgcaactgctactgctcgat 1686
|||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||
Sbjct: 268 aggagccgtgtcatctttgcatggctggcatatatgtagccgcaactgctactgctcgat 327
Query: 1687 gagccgacaaatcatttggacattgagaccattgactccctggcggaggcactgaatgag 1746
||||||||||| ||| |||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 328 gagccgacaaaccatctggatattgagaccattgactccctggccgaggcactgaatgag 387
Query: 1747 tgggatggtggtttggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaa 1806
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tgggatggtggtttggttttagtgagccatgatttcaggctgatcaaccaggttgctcaa 447
Query: 1807 gagatttgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggatttc 1866
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gagatctgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggatttc 507
Query: 1867 aaggcacacttgaagagcaaggctggtttatctgattagagggct 1911
|||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 508 aaggcacacttgaagagcaaggctggtttatctgattagaaggct 552
>gb|CW789294.1|CW789294 SP__Ba0056H24.f SP__Ba Sorghum propinquum genomic clone SP__Ba0056H24
5', DNA sequence
Length = 530
Score = 761 bits (384), Expect = 0.0
Identities = 472/500 (94%), Gaps = 1/500 (0%)
Strand = Plus / Plus
Query: 1412 cattagatggcatggttcggcgccacaatcacctgcgcattgcacagtaccatcagcatc 1471
|||||||||||||||||||||||| |||||||||||||||| | |||||||||||||
Sbjct: 20 cattagatggcatggttcggcgcct-aatcacctgcgcattgttccctaccatcagcatc 78
Query: 1472 ttgcggacaagctggatctggacatgccggctctggcttacatgatgaaggaataccctg 1531
| ||||| |||||||||||||||||| | || |||||||||||||||||||||||| |||
Sbjct: 79 tggcggagaagctggatctggacatgtcagccctggcttacatgatgaaggaatacgctg 138
Query: 1532 ggaccgaagaagagaagatgcgagctgctgttggcaggtttggcctatcaggaaaggcgc 1591
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 139 ggaccgaagaagagaagatgcgagccgctgttggcaggtttggcctgtcaggaaaggcgc 198
Query: 1592 aggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtcatctttgcatggt 1651
|||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 199 aggtgatgccgatgaagaatctctctgatgggcaaaggagccgtgtcatctttgcatggc 258
Query: 1652 tggcatataggcagccgcaactgctactgctcgatgagccgacaaatcatttggacattg 1711
||||||||| | |||||||||||||||||||||||||||||||||| ||| |||| ||||
Sbjct: 259 tggcatatatgtagccgcaactgctactgctcgatgagccgacaaaccatctggatattg 318
Query: 1712 agaccattgactccctggcggaggcactgaatgagtgggatggtggtttggtcttggtga 1771
||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||
Sbjct: 319 agaccattgactccctggccgaggcactgaatgagtgggatggtggtttggttttagtga 378
Query: 1772 gccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgtgtgagaatcagg 1831
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 379 gccatgatttcaggctgatcaaccaggttgctcaagagatctgggtgtgtgagaatcagg 438
Query: 1832 cggtgacaaggtgggaaggtgatatcatggatttcaaggcacacttgaagagcaaggctg 1891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cggtgacaaggtgggaaggtgatatcatggatttcaaggcacacttgaagagcaaggctg 498
Query: 1892 gtttatctgattagagggct 1911
||||||||||||||| ||||
Sbjct: 499 gtttatctgattagaaggct 518
>gb|BG322785.1|BG322785 EM1_14_B10.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 580
Score = 761 bits (384), Expect = 0.0
Identities = 456/480 (95%)
Strand = Plus / Plus
Query: 110 tcgacgccatggtgtcggatgccagcaagaagaaggccgcccagaagaaggccgctgcgg 169
||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||
Sbjct: 101 tcgacgccatggtgtcggaggccagcaagaagaaggccgctcagaagaaggccgccgcgg 160
Query: 170 ctgccaagaggggaggcaaggcctcggtggcgtcctcgtcgtcttcgtctgcggccgcgg 229
| || |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||
Sbjct: 161 ccgcgaagaggggaggcaaggccgcggtggcgtcctcatcgtcttcatctgcggccgcgg 220
Query: 230 ccgtcgataaggtggcgaacggcgtcgtggcgcttaagctatcggaccggacctgcaccg 289
||| |||||||| |||||||||||||| |||||| || ||||| ||||| ||||||||||
Sbjct: 221 ccgccgataaggcggcgaacggcgtcgcggcgctcaaactatcagaccgcacctgcaccg 280
Query: 290 gggtcctcgcgtctcacccgctttcccgggatatccacatagagtctctttctttaacat 349
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 281 gggtcctcgcgtctcacccgctctcccgcgatatccacatagagtctctttctttaacat 340
Query: 350 tccatgggcatgaccttattgtggattctgatttggagctgaactacgggaggcgatacg 409
||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 341 tccatgggcatgaccttattgtggattctgagttggagctgaactatggaaggcgatacg 400
Query: 410 gtttgcttgggttgaatggctgtggaaaatctactcttctcacagcaataggctgcagag 469
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 401 gtttgcttgggttgaatggctgtgggaaatctactcttctcacagcaataggctgcagag 460
Query: 470 aacttcctatccctgaacacatggacatataccatctaagccatgagattgaagcttctg 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aacttcctatccctgaacacatggacatataccatctaagccatgagattgaagcttctg 520
Query: 530 acatgtctgcactgcaagccattgttagttgtgacgaagaaagagtgaagttggaaaagg 589
|||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||
Sbjct: 521 acatgtctgcactgcaagccgttgttacttgtgacgaagaaagagtaaagttggaaaagg 580
>gb|BG559843.1|BG559843 RHIZ2_74_C10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 660
Score = 753 bits (380), Expect = 0.0
Identities = 472/500 (94%), Gaps = 2/500 (0%)
Strand = Plus / Plus
Query: 1504 ctggcttacatgatgaaggaataccctgggaccgaagaagagaagatgcgagctgctgtt 1563
|||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 8 ctggcttacatgatgaaggaatacgctgggaccgaagaagagaagatgcgagccgctgtt 67
Query: 1564 ggcaggtttggcctatcaggaaaggcgcaggtgatgccaatgaggaatctttctgatggg 1623
|||||||||||||| ||||||||||||||||||||||| |||| |||||| |||||||||
Sbjct: 68 ggcaggtttggcctgtcaggaaaggcgcaggtgatgccgatgaagaatctctctgatggg 127
Query: 1624 caaaggagccgtgtcatctttgcatggttggcatataggcagccgcaactgctactgctc 1683
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 128 caaaggagccgtgtcatctttgcatggctggcatataggcagccgcaactgctactgctc 187
Query: 1684 gatgagccgacaaatcatttggacattgagaccattgactccctggcggaggcactgaat 1743
|||||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 188 gatgagccgacaaaccatctggatattgagaccattgactccctggccgaggcactgaat 247
Query: 1744 gagtgggatggtggtttggtcttggtgagccatgatttcaggctgatcaaccaggttgct 1803
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 248 gagtgggatggtggtttggttttagtgagccatgatttcaggctgatcaaccaggttgct 307
Query: 1804 caagagatttgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggat 1863
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 caagagatctgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggat 367
Query: 1864 ttcaaggcacacttgaagagcaaggctggtttatctgattagagggctttttccagcaac 1923
||||||||||||||||||||||||||||||||||||||||||| ||| | || ||||||
Sbjct: 368 ttcaaggcacacttgaagagcaaggctggtttatctgattagaaggc-tcgtctagcaac 426
Query: 1924 catgagctttttaactctgtatcacgaagtcccagttttccaatagcgaactatcagagt 1983
|||||||||||||| ||||||||||||||||| | ||||||| |||| ||||||| |||
Sbjct: 427 catgagctttttaagtctgtatcacgaagtcctatttttccagtagcaaactatcggaga 486
Query: 1984 tact-ttattgtatcggatt 2002
|||| ||||||||||||||
Sbjct: 487 tactgctattgtatcggatt 506
Score = 91.7 bits (46), Expect = 2e-016
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 2029 taccttatactacctggaatatttatttatatatcttttgaaatgctattatgt 2082
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 540 taccttatactacctggaatgtttatttatatattttttgaaatgctattatgt 593
>gb|BE360730.1|BE360730 DG1_66_H06.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 465
Score = 745 bits (376), Expect = 0.0
Identities = 430/448 (95%)
Strand = Plus / Plus
Query: 1465 cagcatcttgcggacaagctggatctggacatgccggctctggcttacatgatgaaggaa 1524
|||||||| ||||| |||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 1 cagcatctggcggagaagctggatctggacatgccagccctggcttacatgatgaaggaa 60
Query: 1525 taccctgggaccgaagaagagaagatgcgagctgctgttggcaggtttggcctatcagga 1584
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 taccctgggactgaagaagagaagatgcgagctgctgttggcaggtttggcctgtcagga 120
Query: 1585 aaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtcatcttt 1644
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaggcgcaggtgatgccgatgaagaatctttctgatgggcaaaggagccgtgtcatcttt 180
Query: 1645 gcatggttggcatataggcagccgcaactgctactgctcgatgagccgacaaatcatttg 1704
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 181 gcatggctggcatataggcagccgcaactgctactgctcgatgagccgacaaaccatctg 240
Query: 1705 gacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtttggtc 1764
|| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 241 gatattgagaccattgactccctggccgaggcactgaatgagtgggatggtggtttggtt 300
Query: 1765 ttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgtgtgag 1824
| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 301 ctagtgagccatgatttcaggctgatcaaccaggttgctcaagagatctgggtgtgtgag 360
Query: 1825 aatcaggcggtgacaaggtgggaaggtgatatcatggatttcaaggcacacttgaagagc 1884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatcaggcggtgacaaggtgggaaggtgatatcatggatttcaaggcacacttgaagagc 420
Query: 1885 aaggctggtttatctgattagagggctt 1912
|||||||||||||||||||||| |||||
Sbjct: 421 aaggctggtttatctgattagaaggctt 448
>gb|BG322375.1|BG322375 EM1_24_A10.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 546
Score = 724 bits (365), Expect = 0.0
Identities = 434/457 (94%)
Strand = Plus / Plus
Query: 110 tcgacgccatggtgtcggatgccagcaagaagaaggccgcccagaagaaggccgctgcgg 169
||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||
Sbjct: 90 tcgacgccatggtgtcggaggccagcaagaagaaggccgctcagaagaaggccgccgcgg 149
Query: 170 ctgccaagaggggaggcaaggcctcggtggcgtcctcgtcgtcttcgtctgcggccgcgg 229
| || |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||
Sbjct: 150 ccgcgaagaggggaggcaaggccgcggtggcgtcctcatcgtcttcatctgcggccgcgg 209
Query: 230 ccgtcgataaggtggcgaacggcgtcgtggcgcttaagctatcggaccggacctgcaccg 289
||| |||||||| |||||||||||||| |||||| || ||||| ||||| ||||||||||
Sbjct: 210 ccgccgataaggcggcgaacggcgtcgcggcgctcaaactatcagaccgcacctgcaccg 269
Query: 290 gggtcctcgcgtctcacccgctttcccgggatatccacatagagtctctttctttaacat 349
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 270 gggtcctcgcgtctcacccgctctcccgcgatatccacatagagtctctttctttaacat 329
Query: 350 tccatgggcatgaccttattgtggattctgatttggagctgaactacgggaggcgatacg 409
||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 330 tccatgggcatgaccttattgtggattctgagttggagctgaactatggaaggcgatacg 389
Query: 410 gtttgcttgggttgaatggctgtggaaaatctactcttctcacagcaataggctgcagag 469
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 390 gtttgcttgggttgaatggctgtgggaaatctactcttctcacagcaataggctgcagag 449
Query: 470 aacttcctatccctgaacacatggacatataccatctaagccatgagattgaagcttctg 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 aacttcctatccctgaacacatggacatataccatctaagccatgagattgaagcttctg 509
Query: 530 acatgtctgcactgcaagccattgttagttgtgacga 566
|||||||||||||||||||| |||||| |||||||||
Sbjct: 510 acatgtctgcactgcaagccgttgttacttgtgacga 546
>gb|BM318539.1|BM318539 PI1_14_G05.b9_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 552
Score = 722 bits (364), Expect = 0.0
Identities = 433/456 (94%)
Strand = Plus / Plus
Query: 110 tcgacgccatggtgtcggatgccagcaagaagaaggccgcccagaagaaggccgctgcgg 169
||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||
Sbjct: 97 tcgacgccatggtgtcggaggccagcaagaagaaggccgctcagaagaaggccgccgcgg 156
Query: 170 ctgccaagaggggaggcaaggcctcggtggcgtcctcgtcgtcttcgtctgcggccgcgg 229
| || |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||
Sbjct: 157 ccgcgaagaggggaggcaaggccgcggtggcgtcctcatcgtcttcatctgcggccgcgg 216
Query: 230 ccgtcgataaggtggcgaacggcgtcgtggcgcttaagctatcggaccggacctgcaccg 289
||| |||||||| |||||||||||||| |||||| || ||||| ||||| ||||||||||
Sbjct: 217 ccgccgataaggcggcgaacggcgtcgcggcgctcaaactatcagaccgcacctgcaccg 276
Query: 290 gggtcctcgcgtctcacccgctttcccgggatatccacatagagtctctttctttaacat 349
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 277 gggtcctcgcgtctcacccgctctcccgcgatatccacatagagtctctttctttaacat 336
Query: 350 tccatgggcatgaccttattgtggattctgatttggagctgaactacgggaggcgatacg 409
||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 337 tccatgggcatgaccttattgtggattctgagttggagctgaactatggaaggcgatacg 396
Query: 410 gtttgcttgggttgaatggctgtggaaaatctactcttctcacagcaataggctgcagag 469
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 397 gtttgcttgggttgaatggctgtgggaaatctactcttctcacagcaataggctgcagag 456
Query: 470 aacttcctatccctgaacacatggacatataccatctaagccatgagattgaagcttctg 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 aacttcctatccctgaacacatggacatataccatctaagccatgagattgaagcttctg 516
Query: 530 acatgtctgcactgcaagccattgttagttgtgacg 565
|||||||||||||||||||| |||||| ||||||||
Sbjct: 517 acatgtctgcactgcaagccgttgttacttgtgacg 552
>gb|BM328971.1|BM328971 PIC1_31_G10.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 686
Score = 720 bits (363), Expect = 0.0
Identities = 466/495 (94%), Gaps = 4/495 (0%)
Strand = Plus / Plus
Query: 1511 acatgatgaaggaataccctgggaccgaagaagagaagatgcgagctgctgttggcaggt 1570
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 acatgatgaaggaataccctgggactgaagaagagaagatgcgagctgctgttggcaggt 60
Query: 1571 ttggcctatcaggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaagga 1630
||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 61 ttggcctgtcaggaaaggcgcaggtgatgccgatgaagaatctttctgatgggcaaagga 120
Query: 1631 gccgtgtcatctttgcatggttggcatataggcagccgcaactgctactgctcgatgagc 1690
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 121 gccgtgtcatctttgcatggctggcatataggcagccgcaattgctactgctcgatgagc 180
Query: 1691 cgacaaatcatttggacattgagaccattgac-tccctggcggaggcactgaatgagtgg 1749
||||||| ||| |||| ||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 181 cgacaaaccatctggatattgagaccattgacttccctggccgaggcactgaatgagtgg 240
Query: 1750 gatggtggtttggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagag 1809
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatggtggtttggttctagtgagccatgatttcaggctgatcaaccaggttgctcaagag 300
Query: 1810 atttgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggatttcaag 1869
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atctgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggatttcaag 360
Query: 1870 gcacacttgaagagcaaggct-ggtttatctgattagagggctttttccagcaaccatga 1928
||||||||||||||||||||| ||||||||||||||| ||| || || |||||||||||
Sbjct: 361 gcacacttgaagagcaaggctctgtttatctgattagaaggc-ttgtctagcaaccatga 419
Query: 1929 gctttttaactctgtatcacgaagtcccagttttccaatagcgaactatcagagttact- 1987
||||||||||||||||||||||||||| | ||||||| |||| ||||||| ||| ||||
Sbjct: 420 gctttttaactctgtatcacgaagtcctatttttccagtagcaaactatcggagatactg 479
Query: 1988 ttattgtatcggatt 2002
||||||||||||||
Sbjct: 480 ctattgtatcggatt 494
Score = 77.8 bits (39), Expect = 4e-012
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 2029 taccttatactacctggaatatttatttatata-tcttttgaaatgctattatgt 2082
|||||||||||||||||||| |||||||||||| | |||||||||||||||||||
Sbjct: 528 taccttatactacctggaatgtttatttatatatttttttgaaatgctattatgt 582
>gb|BG356261.1|BG356261 EM1_23_D07.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 544
Score = 706 bits (356), Expect = 0.0
Identities = 419/440 (95%)
Strand = Plus / Plus
Query: 110 tcgacgccatggtgtcggatgccagcaagaagaaggccgcccagaagaaggccgctgcgg 169
||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||
Sbjct: 101 tcgacgccatggtgtcggaggccagcaagaagaaggccgctcagaagaaggccgccgcgg 160
Query: 170 ctgccaagaggggaggcaaggcctcggtggcgtcctcgtcgtcttcgtctgcggccgcgg 229
| || |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||
Sbjct: 161 ccgcgaagaggggaggcaaggccgcggtggcgtcctcatcgtcttcatctgcggccgcgg 220
Query: 230 ccgtcgataaggtggcgaacggcgtcgtggcgcttaagctatcggaccggacctgcaccg 289
||| |||||||| |||||||||||||| |||||| || ||||| ||||| ||||||||||
Sbjct: 221 ccgccgataaggcggcgaacggcgtcgcggcgctcaaactatcagaccgcacctgcaccg 280
Query: 290 gggtcctcgcgtctcacccgctttcccgggatatccacatagagtctctttctttaacat 349
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 281 gggtcctcgcgtctcacccgctctcccgcgatatccacatagagtctctttctttaacat 340
Query: 350 tccatgggcatgaccttattgtggattctgatttggagctgaactacgggaggcgatacg 409
||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 341 tccatgggcatgaccttattgtggattctgagttggagctgaactatggaaggcgatacg 400
Query: 410 gtttgcttgggttgaatggctgtggaaaatctactcttctcacagcaataggctgcagag 469
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 401 gtttgcttgggttgaatggctgtgggaaatctactcttctcacagcaataggctgcagag 460
Query: 470 aacttcctatccctgaacacatggacatataccatctaagccatgagattgaagcttctg 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aacttcctatccctgaacacatggacatataccatctaagccatgagattgaagcttctg 520
Query: 530 acatgtctgcactgcaagcc 549
||||||||||||||||||||
Sbjct: 521 acatgtctgcactgcaagcc 540
>gb|BG411087.1|BG411087 EM1_25_F02.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 444
Score = 700 bits (353), Expect = 0.0
Identities = 413/433 (95%)
Strand = Plus / Plus
Query: 201 gtcctcgtcgtcttcgtctgcggccgcggccgtcgataaggtggcgaacggcgtcgtggc 260
|||||| |||||||| |||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 9 gtcctcatcgtcttcatctgcggccgcggccgccgataaggcggcgaacggcgtcgcggc 68
Query: 261 gcttaagctatcggaccggacctgcaccggggtcctcgcgtctcacccgctttcccggga 320
||| || ||||| ||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 69 gctcaaactatcagaccgcacctgcaccggggtcctcgcgtctcacccgctctcccgcga 128
Query: 321 tatccacatagagtctctttctttaacattccatgggcatgaccttattgtggattctga 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tatccacatagagtctctttctttaacattccatgggcatgaccttattgtggattctga 188
Query: 381 tttggagctgaactacgggaggcgatacggtttgcttgggttgaatggctgtggaaaatc 440
|||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 189 gttggagctgaactatggaaggcgatacggtttgcttgggttgaatggctgtgggaaatc 248
Query: 441 tactcttctcacagcaataggctgcagagaacttcctatccctgaacacatggacatata 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tactcttctcacagcaataggctgcagagaacttcctatccctgaacacatggacatata 308
Query: 501 ccatctaagccatgagattgaagcttctgacatgtctgcactgcaagccattgttagttg 560
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 309 ccatctaagccatgagattgaagcttctgacatgtctgcactgcaagccgttgttacttg 368
Query: 561 tgacgaagaaagagtgaagttggaaaaggaagctgaaattttggctgcacaggatgatgg 620
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 369 tgacgaagaaagagtaaagttggaaaaggaagctgaaattgtggctgcacaggatgatgg 428
Query: 621 tggtggtgaagca 633
|||||| ||||||
Sbjct: 429 tggtggcgaagca 441
>gb|BG323038.1|BG323038 EM1_14_B10.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 406
Score = 686 bits (346), Expect = 0.0
Identities = 391/406 (96%)
Strand = Plus / Plus
Query: 1482 gctggatctggacatgccggctctggcttacatgatgaaggaataccctgggaccgaaga 1541
|||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||
Sbjct: 1 gctggatctggacatgccagccctggcttacatgatgaaggaataccctgggactgaaga 60
Query: 1542 agagaagatgcgagctgctgttggcaggtttggcctatcaggaaaggcgcaggtgatgcc 1601
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 61 agagaagatgcgagctgctgttggcaggtttggcctgtcaggaaaggcgcaggtgatgcc 120
Query: 1602 aatgaggaatctttctgatgggcaaaggagccgtgtcatctttgcatggttggcatatag 1661
|||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 121 gatgaagaatctttctgatgggcaaaggagccgtgtcatctttgcatggctggcatatag 180
Query: 1662 gcagccgcaactgctactgctcgatgagccgacaaatcatttggacattgagaccattga 1721
|||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||
Sbjct: 181 gcagccgcaactgctactgctcgatgagccgacaaaccatctggatattgagaccattga 240
Query: 1722 ctccctggcggaggcactgaatgagtgggatggtggtttggtcttggtgagccatgattt 1781
||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 241 ctccctggccgaggcactgaatgagtgggatggtggtttggttctagtgagccatgattt 300
Query: 1782 caggctgatcaaccaggttgctcaagagatttgggtgtgtgagaatcaggcggtgacaag 1841
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 301 caggctgatcaaccaggttgctcaagagatctgggtgtgtgagaatcaggcggtgacaag 360
Query: 1842 gtgggaaggtgatatcatggatttcaaggcacacttgaagagcaag 1887
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtgggaaggtgatatcatggatttcaaggcacacttgaagagcaag 406
>gb|BG273169.1|BG273169 OV2_27_F10.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 576
Score = 656 bits (331), Expect = 0.0
Identities = 411/435 (94%), Gaps = 2/435 (0%)
Strand = Plus / Plus
Query: 1569 gtttggcctatcaggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaag 1628
||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 1 gtttggcctgtcaggaaaggcgcaggtgatgccgatgaagaatctttctgatgggcaaag 60
Query: 1629 gagccgtgtcatctttgcatggttggcatataggcagccgcaactgctactgctcgatga 1688
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagccgtgtcatctttgcatggctggcatataggcagccgcaactgctactgctcgatga 120
Query: 1689 gccgacaaatcatttggacattgagaccattgactccctggcggaggcactgaatgagtg 1748
||||||||| ||| |||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 121 gccgacaaaccatctggatattgagaccattgactccctggccgaggcactgaatgagtg 180
Query: 1749 ggatggtggtttggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaaga 1808
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggatggtggtttggttctagtgagccatgatttcaggctgatcaaccaggttgctcaaga 240
Query: 1809 gatttgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggatttcaa 1868
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatctgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggatttcaa 300
Query: 1869 ggcacacttgaagagcaaggctggtttatctgattagagggctttttccagcaaccatga 1928
|||||||||||||||||||||||||||||||||||||| ||| || || |||||||||||
Sbjct: 301 ggcacacttgaagagcaaggctggtttatctgattagaaggc-ttgtctagcaaccatga 359
Query: 1929 gctttttaactctgtatcacgaagtcccagttttccaatagcgaactatcagagttact- 1987
||||||||||||||||||||||||||| | ||||||| |||| ||||||| ||| ||||
Sbjct: 360 gctttttaactctgtatcacgaagtcctatttttccagtagcaaactatcggagatactg 419
Query: 1988 ttattgtatcggatt 2002
||||||||||||||
Sbjct: 420 ctattgtatcggatt 434
Score = 77.8 bits (39), Expect = 4e-012
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 2029 taccttatactacctggaatatttatttatata-tcttttgaaatgctattatgt 2082
|||||||||||||||||||| |||||||||||| | |||||||||||||||||||
Sbjct: 468 taccttatactacctggaatgtttatttatatatttttttgaaatgctattatgt 522
>gb|BG273436.1|BG273436 OV2_25_F11.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 385
Score = 624 bits (315), Expect = e-177
Identities = 366/383 (95%)
Strand = Plus / Plus
Query: 1410 tccattagatggcatggttcggcgccacaatcacctgcgcattgcacagtaccatcagca 1469
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3 tccattagatggcatggttcggcgccataatcacctgcgcattgcacagtaccatcagca 62
Query: 1470 tcttgcggacaagctggatctggacatgccggctctggcttacatgatgaaggaataccc 1529
||| ||||| |||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 63 tctggcggagaagctggatctggacatgccagccctggcttacatgatgaaggaataccc 122
Query: 1530 tgggaccgaagaagagaagatgcgagctgctgttggcaggtttggcctatcaggaaaggc 1589
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 123 tgggactgaagaagagaagatgcgagctgctgttggcaggtttggcctgtcaggaaaggc 182
Query: 1590 gcaggtgatgccaatgaggaatctttctgatgggcaaaggagccgtgtcatctttgcatg 1649
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gcaggtgatgccgatgaagaatctttctgatgggcaaaggagccgtgtcatctttgcatg 242
Query: 1650 gttggcatataggcagccgcaactgctactgctcgatgagccgacaaatcatttggacat 1709
| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||
Sbjct: 243 gctggcatataggcagccgcaactgctactgctcgatgagccgacaaaccatctggatat 302
Query: 1710 tgagaccattgactccctggcggaggcactgaatgagtgggatggtggtttggtcttggt 1769
||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||
Sbjct: 303 tgagaccattgactccctggccgaggcactgaatgagtgggatggtggtttggttctagt 362
Query: 1770 gagccatgatttcaggctgatca 1792
|||||||||||||||||||||||
Sbjct: 363 gagccatgatttcaggctgatca 385
>gb|BM327615.1|BM327615 PIC1_8_C01.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 592
Score = 583 bits (294), Expect = e-164
Identities = 365/386 (94%), Gaps = 2/386 (0%)
Strand = Plus / Plus
Query: 1618 gatgggcaaaggagccgtgtcatctttgcatggttggcatataggcagccgcaactgcta 1677
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 gatgggcaaaggagccgtgtcatctttgcatggctggcatataggcagccgcaactgcta 60
Query: 1678 ctgctcgatgagccgacaaatcatttggacattgagaccattgactccctggcggaggca 1737
|||||||||||||||||||| ||| |||| ||||||||||||||||||||||| ||||||
Sbjct: 61 ctgctcgatgagccgacaaaccatctggatattgagaccattgactccctggccgaggca 120
Query: 1738 ctgaatgagtgggatggtggtttggtcttggtgagccatgatttcaggctgatcaaccag 1797
|||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 121 ctgaatgagtgggatggtggtttggttctagtgagccatgatttcaggctgatcaaccag 180
Query: 1798 gttgctcaagagatttgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatc 1857
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttgctcaagagatctgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatc 240
Query: 1858 atggatttcaaggcacacttgaagagcaaggctggtttatctgattagagggctttttcc 1917
||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||
Sbjct: 241 atggatttcaaggcacacttgaagagcaaggctggtttatctgattagaaggc-ttgtct 299
Query: 1918 agcaaccatgagctttttaactctgtatcacgaagtcccagttttccaatagcgaactat 1977
|||||||||||||||||||||||||||||||||||||| | ||||||| |||| ||||||
Sbjct: 300 agcaaccatgagctttttaactctgtatcacgaagtcctatttttccagtagcaaactat 359
Query: 1978 cagagttact-ttattgtatcggatt 2002
| ||| |||| ||||||||||||||
Sbjct: 360 cggagatactgctattgtatcggatt 385
Score = 77.8 bits (39), Expect = 4e-012
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 2029 taccttatactacctggaatatttatttatata-tcttttgaaatgctattatgt 2082
|||||||||||||||||||| |||||||||||| | |||||||||||||||||||
Sbjct: 419 taccttatactacctggaatgtttatttatatatttttttgaaatgctattatgt 473
>gb|CW196301.1|CW196301 104_620_11181098_148_36815_011 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11181098, DNA
sequence
Length = 677
Score = 577 bits (291), Expect = e-162
Identities = 576/671 (85%)
Strand = Plus / Minus
Query: 1027 cttgaagagaatcaaatgaagcagtacaaatgggagcaggaacagattgcttcaatgaag 1086
|||||||||||||| |||||||||| ||| ||||||||||| |||||||| ||||||||
Sbjct: 675 cttgaagagaatcagatgaagcagttcaagtgggagcaggagcagattgcatcaatgaaa 616
Query: 1087 gagtacattgctcgcttcggtcatggttctgcaaagcttgctcgtcaggctcagagcaaa 1146
||||||||||| || || || ||||| |||||||||||||| |||||||| ||||||||
Sbjct: 615 gagtacattgcacggtttggccatggatctgcaaagcttgcacgtcaggcccagagcaag 556
Query: 1147 gagaaaactcttgcaaagatggagcgaggtggtctcaccgagaaggttgttagggacaga 1206
|||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| | |
Sbjct: 555 gagaaaactcttgcaaagatggagcgtggtgggctcactgagaaggttgttagggataaa 496
Query: 1207 gttctagtgttcaggtttacagatgttggcaaacttcctccacctgtgctgcagtttgtt 1266
| || || ||| | || ||| |||||||||||||||| ||||| ||||| |||||||||
Sbjct: 495 atactggtcttccgcttcacaaatgttggcaaacttccaccaccagtgcttcagtttgtt 436
Query: 1267 gaagtcaagtttgggtatacaccagataatctcatatacaagagtcttgactttggagtt 1326
|| |||| ||||||||| ||||| ||||||||| | ||||||| || |||||||| |||
Sbjct: 435 gaggtcacgtttgggtacacaccggataatctcttgtacaagaagctcgactttggtgtt 376
Query: 1327 gatcttgactctagaatcgcattggttggtcccaatggtgcagggaagagcactcttctg 1386
|| || |||||||| || ||| |||||||||||||||| ||||||||||||||||| |||
Sbjct: 375 gacctggactctaggattgcactggttggtcccaatggggcagggaagagcactctcctg 316
Query: 1387 aagcttatgactggtgaccttgctccattagatggcatggttcggcgccacaatcacctg 1446
||||| ||||| ||||| || |||||||| || || ||||| |||| ||||||||||||
Sbjct: 315 aagctgatgacaggtgagctggctccattggacggtatggtgaggcggcacaatcacctg 256
Query: 1447 cgcattgcacagtaccatcagcatcttgcggacaagctggatctggacatgccggctctg 1506
||||| ||||||| ||||||||| || || || |||||||| |||||||| |||| |||
Sbjct: 255 cgcatcgcacagttccatcagcacctggcagagaagctggacctggacatctcggccctg 196
Query: 1507 gcttacatgatgaaggaataccctgggaccgaagaagagaagatgcgagctgctgttggc 1566
||||||||||||||||||||||||| ||||||||||| |||| |||| || || ||
Sbjct: 195 caatacatgatgaaggaataccctgggaacgaagaagagaggatgagagccgcagtcggt 136
Query: 1567 aggtttggcctatcaggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaa 1626
| |||||| || ||||| ||||| |||||||||||||||||||| || || || |||||
Sbjct: 135 aagtttgggctgtcagggaaggctcaggtgatgccaatgaggaacctgtcggacgggcag 76
Query: 1627 aggagccgtgtcatctttgcatggttggcatataggcagccgcaactgctactgctcgat 1686
|||||||||||||||||||| ||| ||||||| ||||||||||| || || ||||| |||
Sbjct: 75 aggagccgtgtcatctttgcgtggctggcatacaggcagccgcagctactgctgctggat 16
Query: 1687 gagccgacaaa 1697
||||| |||||
Sbjct: 15 gagccaacaaa 5
>gb|CD203841.1|CD203841 HS1_2_C02.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_2_C02_A012 3', mRNA sequence
Length = 583
Score = 575 bits (290), Expect = e-162
Identities = 364/386 (94%), Gaps = 2/386 (0%)
Strand = Plus / Plus
Query: 1618 gatgggcaaaggagccgtgtcatctttgcatggttggcatataggcagccgcaactgcta 1677
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 gatgggcaaaggagccgtgtcatctttgcatggctggcatataggcagccgcaactgcta 60
Query: 1678 ctgctcgatgagccgacaaatcatttggacattgagaccattgactccctggcggaggca 1737
|||||||||||||||||||| ||| |||| ||||||||||||||||||||||| ||||||
Sbjct: 61 ctgctcgatgagccgacaaaccatctggatattgagaccattgactccctggccgaggca 120
Query: 1738 ctgaatgagtgggatggtggtttggtcttggtgagccatgatttcaggctgatcaaccag 1797
|||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||
Sbjct: 121 ctgaatgagtgggatggtggtttggttctagtgagccatgatttcaggctgatcgaccag 180
Query: 1798 gttgctcaagagatttgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatc 1857
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttgctcaagagatctgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatc 240
Query: 1858 atggatttcaaggcacacttgaagagcaaggctggtttatctgattagagggctttttcc 1917
||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||
Sbjct: 241 atggatttcaaggcacacttgaagagcaaggctggtttatctgattagaaggc-ttgtct 299
Query: 1918 agcaaccatgagctttttaactctgtatcacgaagtcccagttttccaatagcgaactat 1977
|||||||||||||||||||||||||||||||||||||| | ||||||| |||| ||||||
Sbjct: 300 agcaaccatgagctttttaactctgtatcacgaagtcctatttttccagtagcaaactat 359
Query: 1978 cagagttact-ttattgtatcggatt 2002
| ||| |||| ||||||||||||||
Sbjct: 360 cggagatactgctattgtatcggatt 385
Score = 77.8 bits (39), Expect = 4e-012
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 2029 taccttatactacctggaatatttatttatata-tcttttgaaatgctattatgt 2082
|||||||||||||||||||| |||||||||||| | |||||||||||||||||||
Sbjct: 419 taccttatactacctggaatgtttatttatatatttttttgaaatgctattatgt 473
>gb|BG051560.1|BG051560 FM1_58_A05.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 548
Score = 557 bits (281), Expect = e-156
Identities = 355/377 (94%), Gaps = 2/377 (0%)
Strand = Plus / Plus
Query: 1627 aggagccgtgtcatctttgcatggttggcatataggcagccgcaactgctactgctcgat 1686
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 aggagccgtgtcatctttgcatggctggcatataggcagccgcaactgctactgctcgat 60
Query: 1687 gagccgacaaatcatttggacattgagaccattgactccctggcggaggcactgaatgag 1746
||||||||||| ||| |||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 gagccgacaaaccatctggatattgagaccattgactccctggccgaggcactgaatgag 120
Query: 1747 tgggatggtggtttggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaa 1806
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgggatggtggtttggttttagtgagccatgatttcaggctgatcaaccaggttgctcaa 180
Query: 1807 gagatttgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggatttc 1866
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagatctgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggatttc 240
Query: 1867 aaggcacacttgaagagcaaggctggtttatctgattagagggctttttccagcaaccat 1926
|||||||||||||||||||||||||||||||||||||||| ||| | || |||||||||
Sbjct: 241 aaggcacacttgaagagcaaggctggtttatctgattagaaggc-tcgtctagcaaccat 299
Query: 1927 gagctttttaactctgtatcacgaagtcccagttttccaatagcgaactatcagagttac 1986
||||||||||| ||||||||||||||||| | ||||||| |||| ||||||| ||| |||
Sbjct: 300 gagctttttaagtctgtatcacgaagtcctatttttccagtagcaaactatcggagatac 359
Query: 1987 t-ttattgtatcggatt 2002
| ||||||||||||||
Sbjct: 360 tgctattgtatcggatt 376
Score = 91.7 bits (46), Expect = 2e-016
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 2029 taccttatactacctggaatatttatttatatatcttttgaaatgctattatgt 2082
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 410 taccttatactacctggaatgtttatttatatattttttgaaatgctattatgt 463
>gb|CW336249.1|CW336249 104_835_11483487_148_36098_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11483487, DNA
sequence
Length = 773
Score = 543 bits (274), Expect = e-152
Identities = 541/630 (85%)
Strand = Plus / Plus
Query: 1275 gtttgggtatacaccagataatctcatatacaagagtcttgactttggagttgatcttga 1334
||||||||| ||||| ||||||||| | ||||||| || |||||||| ||||| || ||
Sbjct: 4 gtttgggtacacaccggataatctcttgtacaagaagctcgactttggtgttgacctgga 63
Query: 1335 ctctagaatcgcattggttggtcccaatggtgcagggaagagcactcttctgaagcttat 1394
|||||| || ||| |||||||||||||||| ||||||||||||||||| |||||||| ||
Sbjct: 64 ctctaggattgcactggttggtcccaatggggcagggaagagcactctcctgaagctgat 123
Query: 1395 gactggtgaccttgctccattagatggcatggttcggcgccacaatcacctgcgcattgc 1454
||| ||||| || |||||||| || || ||||| |||| ||||||||||||||||| ||
Sbjct: 124 gacaggtgagctggctccattggacggtatggtgaggcggcacaatcacctgcgcatcgc 183
Query: 1455 acagtaccatcagcatcttgcggacaagctggatctggacatgccggctctggcttacat 1514
||||| ||||||||| || || || |||||||| |||||||| |||| ||| |||||
Sbjct: 184 acagttccatcagcacctggcagagaagctggacctggacatctcggccctgcaatacat 243
Query: 1515 gatgaaggaataccctgggaccgaagaagagaagatgcgagctgctgttggcaggtttgg 1574
|||||||||||||||||||| ||||||||||| |||| |||| || || || | ||||||
Sbjct: 244 gatgaaggaataccctgggaacgaagaagagaggatgagagccgcagtcggtaagtttgg 303
Query: 1575 cctatcaggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagccg 1634
|| ||||| ||||| |||||||||||||||||||| || || || ||||| ||||||||
Sbjct: 304 gctgtcagggaaggctcaggtgatgccaatgaggaacctgtcggacgggcagaggagccg 363
Query: 1635 tgtcatctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccgac 1694
|||||||||||| ||| ||||||| ||||||||||| || || ||||| |||||||| ||
Sbjct: 364 tgtcatctttgcgtggctggcatacaggcagccgcagctactgctgctggatgagccaac 423
Query: 1695 aaatcatttggacattgagaccattgactccctggcggaggcactgaatgagtgggatgg 1754
||| ||| | || || |||||||| |||||||| |||||||| ||||| |||||||| ||
Sbjct: 424 aaaccatctcgatatcgagaccatcgactccctagcggaggcgctgaacgagtgggacgg 483
Query: 1755 tggtttggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttg 1814
||| |||| ||||||||||||| |||||||||||||||||||| ||||| ||||| ||
Sbjct: 484 cggtctggtactggtgagccatgacttcaggctgatcaaccaggtcgctcatgagatctg 543
Query: 1815 ggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggatttcaaggcaca 1874
||| |||||||||||||| ||||| ||||||||||| ||||||||||||||||||| |||
Sbjct: 544 ggtttgtgagaatcaggcagtgactaggtgggaaggcgatatcatggatttcaaggaaca 603
Query: 1875 cttgaagagcaaggctggtttatctgatta 1904
|||| ||||||||||||| ||||||||||
Sbjct: 604 tttgaggagcaaggctggtctatctgatta 633
>gb|BG356527.1|BG356527 EM1_23_D07.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 487
Score = 523 bits (264), Expect = e-146
Identities = 332/352 (94%), Gaps = 2/352 (0%)
Strand = Plus / Plus
Query: 1652 tggcatataggcagccgcaactgctactgctcgatgagccgacaaatcatttggacattg 1711
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||
Sbjct: 3 tggcatataggcagccgcaactgctactgctcgatgagccgacaaaccatctggatattg 62
Query: 1712 agaccattgactccctggcggaggcactgaatgagtgggatggtggtttggtcttggtga 1771
||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||
Sbjct: 63 agaccattgactccctggccgaggcactgaatgagtgggatggtggtttggttctagtga 122
Query: 1772 gccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgtgtgagaatcagg 1831
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 123 gccatgatttcaggctgatcaaccaggttgctcaagagatctgggtgtgtgagaatcagg 182
Query: 1832 cggtgacaaggtgggaaggtgatatcatggatttcaaggcacacttgaagagcaaggctg 1891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 cggtgacaaggtgggaaggtgatatcatggatttcaaggcacacttgaagagcaaggctg 242
Query: 1892 gtttatctgattagagggctttttccagcaaccatgagctttttaactctgtatcacgaa 1951
||||||||||||||| ||| || || ||||||||||||||||||||||||||||||||||
Sbjct: 243 gtttatctgattagaaggc-ttgtctagcaaccatgagctttttaactctgtatcacgaa 301
Query: 1952 gtcccagttttccaatagcgaactatcagagttact-ttattgtatcggatt 2002
|||| | ||||||| |||| ||||||| ||| |||| ||||||||||||||
Sbjct: 302 gtcctatttttccagtagcaaactatcggagatactgctattgtatcggatt 353
Score = 77.8 bits (39), Expect = 4e-012
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 2029 taccttatactacctggaatatttatttatata-tcttttgaaatgctattatgt 2082
|||||||||||||||||||| |||||||||||| | |||||||||||||||||||
Sbjct: 387 taccttatactacctggaatgtttatttatatatttttttgaaatgctattatgt 441
>gb|BG273302.1|BG273302 OV2_25_F11.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 522
Score = 507 bits (256), Expect = e-141
Identities = 324/344 (94%), Gaps = 2/344 (0%)
Strand = Plus / Plus
Query: 1660 aggcagccgcaactgctactgctcgatgagccgacaaatcatttggacattgagaccatt 1719
|||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||
Sbjct: 1 aggcagccgcaactgctactgctcgatgagccgacaaaccatctggatattgagaccatt 60
Query: 1720 gactccctggcggaggcactgaatgagtgggatggtggtttggtcttggtgagccatgat 1779
||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 61 gactccctggccgaggcactgaatgagtgggatggtggtttggttctagtgagccatgat 120
Query: 1780 ttcaggctgatcaaccaggttgctcaagagatttgggtgtgtgagaatcaggcggtgaca 1839
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 121 ttcaggctgatcaaccaggttgctcaagagatctgggtgtgtgagaatcaggcggtgaca 180
Query: 1840 aggtgggaaggtgatatcatggatttcaaggcacacttgaagagcaaggctggtttatct 1899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggtgggaaggtgatatcatggatttcaaggcacacttgaagagcaaggctggtttatct 240
Query: 1900 gattagagggctttttccagcaaccatgagctttttaactctgtatcacgaagtcccagt 1959
||||||| ||| || || |||||||||||||||||||||||||||||||||||||| | |
Sbjct: 241 gattagaaggc-ttgtctagcaaccatgagctttttaactctgtatcacgaagtcctatt 299
Query: 1960 tttccaatagcgaactatcagagttact-ttattgtatcggatt 2002
|||||| |||| ||||||| ||| |||| ||||||||||||||
Sbjct: 300 tttccagtagcaaactatcggagatactgctattgtatcggatt 343
Score = 77.8 bits (39), Expect = 4e-012
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 2029 taccttatactacctggaatatttatttatata-tcttttgaaatgctattatgt 2082
|||||||||||||||||||| |||||||||||| | |||||||||||||||||||
Sbjct: 377 taccttatactacctggaatgtttatttatatatttttttgaaatgctattatgt 431
>gb|BM322690.1|BM322690 PIC1_7_H04.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 571
Score = 490 bits (247), Expect = e-136
Identities = 484/563 (85%)
Strand = Plus / Plus
Query: 907 gtcatatcacactcccaagattttctaaatggagtgtgtactaacattatccatatgcaa 966
|||||||| |||||||| || ||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 9 gtcatatctcactcccaggactttctgaatggtgtgtgcactaacatcatccatatgcag 68
Query: 967 aacaagaagctcaagttatacaccggtaactacgatcagtatgttcaaactcgctccgat 1026
|| ||||||||||||||||| || || ||||| || ||||| ||||| || || || ||
Sbjct: 69 aataagaagctcaagttatatactgggaactatgaccagtacgttcagacccgttctgag 128
Query: 1027 cttgaagagaatcaaatgaagcagtacaaatgggagcaggaacagattgcttcaatgaag 1086
|||||||||||||| |||||||||| ||| ||||||||||| |||||||| ||||||||
Sbjct: 129 cttgaagagaatcagatgaagcagttcaagtgggagcaggagcagattgcatcaatgaaa 188
Query: 1087 gagtacattgctcgcttcggtcatggttctgcaaagcttgctcgtcaggctcagagcaaa 1146
||||||||||| || || || ||||| |||||||||||||| |||||||| ||||||||
Sbjct: 189 gagtacattgcacggtttggccatggatctgcaaagcttgcacgtcaggcccagagcaag 248
Query: 1147 gagaaaactcttgcaaagatggagcgaggtggtctcaccgagaaggttgttagggacaga 1206
|||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| | |
Sbjct: 249 gagaaaactcttgcaaagatggagcgtggtgggctcactgagaaggttgttagggataaa 308
Query: 1207 gttctagtgttcaggtttacagatgttggcaaacttcctccacctgtgctgcagtttgtt 1266
| || || ||| | || ||| |||||||||||||||| ||||| ||||| |||||||||
Sbjct: 309 atactggtcttccgcttcacaaatgttggcaaacttccaccaccagtgcttcagtttgtt 368
Query: 1267 gaagtcaagtttgggtatacaccagataatctcatatacaagagtcttgactttggagtt 1326
|| |||| ||||||||| ||||| ||||||||| | ||||||| || |||||||| |||
Sbjct: 369 gaggtcacgtttgggtacacaccggataatctcttgtacaagaagctcgactttggtgtt 428
Query: 1327 gatcttgactctagaatcgcattggttggtcccaatggtgcagggaagagcactcttctg 1386
|| || |||||||| || ||| |||||||||||||||| ||||||||||||||||| |||
Sbjct: 429 gacctggactctaggattgcactggttggtcccaatggggcagggaagagcactctcctg 488
Query: 1387 aagcttatgactggtgaccttgctccattagatggcatggttcggcgccacaatcacctg 1446
||||| ||||| ||||| || |||||||| || || ||||| |||| ||||||||||||
Sbjct: 489 aagctgatgacaggtgagctggctccattggacggtatggtgaggcggcacaatcacctg 548
Query: 1447 cgcattgcacagtaccatcagca 1469
||||| ||||||| |||||||||
Sbjct: 549 cgcatcgcacagttccatcagca 571
>gb|CW123292.1|CW123292 104_502_11111135_148_34685_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11111135, DNA
sequence
Length = 609
Score = 488 bits (246), Expect = e-135
Identities = 518/606 (85%), Gaps = 2/606 (0%)
Strand = Plus / Minus
Query: 1275 gtttgggtatacaccagataatctcatatacaa-gagtcttgactttggagttgatcttg 1333
||||||||| ||||| ||||||||| | ||||| || || |||||||| ||||| || |
Sbjct: 606 gtttgggtacacaccggataatctc-tgtacaaagaagctcgactttggtgttgacctgg 548
Query: 1334 actctagaatcgcattggttggtcccaatggtgcagggaagagcactcttctgaagctta 1393
||||||| || ||| |||||||||||||||| ||||||||||||||||| |||||||| |
Sbjct: 547 actctaggattgcactggttggtcccaatggggcagggaagagcactctcctgaagctga 488
Query: 1394 tgactggtgaccttgctccattagatggcatggttcggcgccacaatcacctgcgcattg 1453
|||| ||||| || |||||||| || || ||||| |||| ||||||||||||||||| |
Sbjct: 487 tgacaggtgagctggctccattggacggtatggtgaggcggcacaatcacctgcgcatcg 428
Query: 1454 cacagtaccatcagcatcttgcggacaagctggatctggacatgccggctctggcttaca 1513
|||||| ||||||||| || || || |||||||| |||||||| |||| ||| ||||
Sbjct: 427 cacagttccatcagcacctggcagagaagctggacctggacatctcggccctgcaataca 368
Query: 1514 tgatgaaggaataccctgggaccgaagaagagaagatgcgagctgctgttggcaggtttg 1573
||||||||||||||||||||| ||||||||||| |||| |||| || || || | |||||
Sbjct: 367 tgatgaaggaataccctgggaacgaagaagagaggatgagagccgcagtcggtaagtttg 308
Query: 1574 gcctatcaggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagcc 1633
| || ||||| ||||| |||||||||||||||||||| || || || ||||| |||||||
Sbjct: 307 ggctgtcagggaaggctcaggtgatgccaatgaggaacctgtcggacgggcagaggagcc 248
Query: 1634 gtgtcatctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccga 1693
||||||||||||| ||| ||||||| ||||||||||| || || ||||| |||||||| |
Sbjct: 247 gtgtcatctttgcgtggctggcatacaggcagccgcagctactgctgctggatgagccaa 188
Query: 1694 caaatcatttggacattgagaccattgactccctggcggaggcactgaatgagtgggatg 1753
|||| ||| | || || |||||||| |||||||| |||||||| ||||| |||||||| |
Sbjct: 187 caaaccatctcgatatcgagaccatcgactccctagcggaggcgctgaacgagtgggacg 128
Query: 1754 gtggtttggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagattt 1813
| ||| |||| ||||||||||||| |||||||||||||||||||| ||||| ||||| |
Sbjct: 127 gcggtctggtactggtgagccatgacttcaggctgatcaaccaggtcgctcatgagatct 68
Query: 1814 gggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggatttcaaggcac 1873
|||| |||||||||||||| ||||| ||||||||||| ||||||||||||||||||| ||
Sbjct: 67 gggtttgtgagaatcaggcagtgactaggtgggaaggcgatatcatggatttcaaggaac 8
Query: 1874 acttga 1879
| ||||
Sbjct: 7 atttga 2
>gb|CF757562.1|CF757562 DSAF1_19_E03.g1_A011 Drought-stressed after flowering Sorghum bicolor
cDNA clone DSAF1_19_E03_A011 3', mRNA sequence
Length = 526
Score = 462 bits (233), Expect = e-128
Identities = 301/321 (93%), Gaps = 2/321 (0%)
Strand = Plus / Plus
Query: 1683 cgatgagccgacaaatcatttggacattgagaccattgactccctggcggaggcactgaa 1742
||||||||||||||| ||| |||| ||||||||||||||||||||||| |||||||||||
Sbjct: 1 cgatgagccgacaaaccatctggatattgagaccattgactccctggccgaggcactgaa 60
Query: 1743 tgagtgggatggtggtttggtcttggtgagccatgatttcaggctgatcaaccaggttgc 1802
||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 61 tgagtgggatggtggtttggttctagtgagccatgatttcaggctgatcaaccaggttgc 120
Query: 1803 tcaagagatttgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatgga 1862
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaagagatctgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatgga 180
Query: 1863 tttcaaggcacacttgaagagcaaggctggtttatctgattagagggctttttccagcaa 1922
|||||||||||||||||||||||||||||||||||||||||||| ||| || || |||||
Sbjct: 181 tttcaaggcacacttgaagagcaaggctggtttatctgattagaaggc-ttgtctagcaa 239
Query: 1923 ccatgagctttttaactctgtatcacgaagtcccagttttccaatagcgaactatcagag 1982
||||||||||||||||||||||||||||||||| | ||||||| |||| ||||||| |||
Sbjct: 240 ccatgagctttttaactctgtatcacgaagtcctatttttccagtagcaaactatcggag 299
Query: 1983 ttact-ttattgtatcggatt 2002
|||| ||||||||||||||
Sbjct: 300 atactgctattgtatcggatt 320
Score = 77.8 bits (39), Expect = 4e-012
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 2029 taccttatactacctggaatatttatttatata-tcttttgaaatgctattatgt 2082
|||||||||||||||||||| |||||||||||| | |||||||||||||||||||
Sbjct: 354 taccttatactacctggaatgtttatttatatatttttttgaaatgctattatgt 408
>gb|BE594254.1|BE594254 WS1_104_B08.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 546
Score = 458 bits (231), Expect = e-126
Identities = 459/535 (85%)
Strand = Plus / Plus
Query: 934 aatggagtgtgtactaacattatccatatgcaaaacaagaagctcaagttatacaccggt 993
||||| ||||| |||||||| ||||||||||| || ||||||||||||||||| || ||
Sbjct: 12 aatggtgtgtgcactaacatcatccatatgcagaataagaagctcaagttatatactggg 71
Query: 994 aactacgatcagtatgttcaaactcgctccgatcttgaagagaatcaaatgaagcagtac 1053
||||| || ||||| ||||| || || || || |||||||||||||| |||||||||| |
Sbjct: 72 aactatgaccagtacgttcagacccgttctgagcttgaagagaatcagatgaagcagttc 131
Query: 1054 aaatgggagcaggaacagattgcttcaatgaaggagtacattgctcgcttcggtcatggt 1113
|| ||||||||||| |||||||| |||||||| ||||||||||| || || || |||||
Sbjct: 132 aagtgggagcaggagcagattgcatcaatgaaagagtacattgcacggtttggccatgga 191
Query: 1114 tctgcaaagcttgctcgtcaggctcagagcaaagagaaaactcttgcaaagatggagcga 1173
|||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 192 tctgcaaagcttgcacgtcaggcccagagcaaggagaaaactcttgcaaagatggagcgt 251
Query: 1174 ggtggtctcaccgagaaggttgttagggacagagttctagtgttcaggtttacagatgtt 1233
||||| ||||| ||||||||||||||||| | | | || || ||| | || ||| |||||
Sbjct: 252 ggtgggctcactgagaaggttgttagggataaaatactggtcttccgcttcacaaatgtt 311
Query: 1234 ggcaaacttcctccacctgtgctgcagtttgttgaagtcaagtttgggtatacaccagat 1293
||||||||||| ||||| ||||| ||||||||||| |||| ||||||||| ||||| |||
Sbjct: 312 ggcaaacttccaccaccagtgcttcagtttgttgaggtcacgtttgggtacacaccggat 371
Query: 1294 aatctcatatacaagagtcttgactttggagttgatcttgactctagaatcgcattggtt 1353
|||||| | ||||||| || |||||||| ||||| || ||||||| || ||| |||||
Sbjct: 372 aatctcttgtacaagaagctcgactttggtgttgacctgaactctaggattgcactggtt 431
Query: 1354 ggtcccaatggtgcagggaagagcactcttctgaagcttatgactggtgaccttgctcca 1413
||||||||||| ||||||||||||||||| |||||||| ||||| ||||| || ||||||
Sbjct: 432 ggtcccaatggggcagggaagagcactctcctgaagctgatgacaggtgagctggctcca 491
Query: 1414 ttagatggcatggttcggcgccacaatcacctgcgcattgcacagtaccatcagc 1468
|| || || ||||| |||| ||||||||||||||||| ||||||| ||||||||
Sbjct: 492 ttggacggtatggtgaggcggcacaatcacctgcgcatcgcacagttccatcagc 546
>gb|BG465323.1|BG465323 EM1_74_H06.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 500
Score = 440 bits (222), Expect = e-121
Identities = 293/314 (93%), Gaps = 2/314 (0%)
Strand = Plus / Plus
Query: 1690 ccgacaaatcatttggacattgagaccattgactccctggcggaggcactgaatgagtgg 1749
|||||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 ccgacaaaccatctggatattgagaccattgactccctggccgaggcactgaatgagtgg 60
Query: 1750 gatggtggtttggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagag 1809
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatggtggtttggttctagtgagccatgatttcaggctgatcaaccaggttgctcaagag 120
Query: 1810 atttgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggatttcaag 1869
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atctgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggatttcaag 180
Query: 1870 gcacacttgaagagcaaggctggtttatctgattagagggctttttccagcaaccatgag 1929
||||||||||||||||||||||||||||||||||||| ||| || || ||||||||||||
Sbjct: 181 gcacacttgaagagcaaggctggtttatctgattagaaggc-ttgtctagcaaccatgag 239
Query: 1930 ctttttaactctgtatcacgaagtcccagttttccaatagcgaactatcagagttact-t 1988
|||||||||||||||||||||||||| | ||||||| |||| ||||||| | | ||||
Sbjct: 240 ctttttaactctgtatcacgaagtcctatttttccagtagcaaactatcggggatactgc 299
Query: 1989 tattgtatcggatt 2002
||||||||||||||
Sbjct: 300 tattgtatcggatt 313
Score = 77.8 bits (39), Expect = 4e-012
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 2029 taccttatactacctggaatatttatttatata-tcttttgaaatgctattatgt 2082
|||||||||||||||||||| |||||||||||| | |||||||||||||||||||
Sbjct: 347 taccttatactacctggaatgtttatttatatatttttttgaaatgctattatgt 401
>gb|BG410772.1|BG410772 EM1_25_F02.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 434
Score = 438 bits (221), Expect = e-121
Identities = 283/301 (94%), Gaps = 2/301 (0%)
Strand = Plus / Plus
Query: 1703 tggacattgagaccattgactccctggcggaggcactgaatgagtgggatggtggtttgg 1762
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 5 tggatattgagaccattgactccctggccgaggcactgaatgagtgggatggtggtttgg 64
Query: 1763 tcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgtgtg 1822
| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 65 ttctagtgagccatgatttcaggctgatcaaccaggttgctcaagagatctgggtgtgtg 124
Query: 1823 agaatcaggcggtgacaaggtgggaaggtgatatcatggatttcaaggcacacttgaaga 1882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 agaatcaggcggtgacaaggtgggaaggtgatatcatggatttcaaggcacacttgaaga 184
Query: 1883 gcaaggctggtttatctgattagagggctttttccagcaaccatgagctttttaactctg 1942
|||||||||||||||||||||||| ||| || || |||||||||||||||||||||||||
Sbjct: 185 gcaaggctggtttatctgattagaaggc-ttgtctagcaaccatgagctttttaactctg 243
Query: 1943 tatcacgaagtcccagttttccaatagcgaactatcagagttact-ttattgtatcggat 2001
||||||||||||| | ||||||| |||| ||||||| ||| |||| |||||||||||||
Sbjct: 244 tatcacgaagtcctatttttccagtagcaaactatcggagatactgctattgtatcggat 303
Query: 2002 t 2002
|
Sbjct: 304 t 304
Score = 77.8 bits (39), Expect = 4e-012
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 2029 taccttatactacctggaatatttatttatata-tcttttgaaatgctattatgt 2082
|||||||||||||||||||| |||||||||||| | |||||||||||||||||||
Sbjct: 338 taccttatactacctggaatgtttatttatatatttttttgaaatgctattatgt 392
>gb|CD461526.1|CD461526 SA1_32_A12.g2_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_32_A12_A002 5', mRNA sequence
Length = 591
Score = 430 bits (217), Expect = e-118
Identities = 394/453 (86%)
Strand = Plus / Plus
Query: 259 gcgcttaagctatcggaccggacctgcaccggggtcctcgcgtctcacccgctttcccgg 318
||||| ||||| || || || ||||||||||| |||| ||| || |||||||| |||||
Sbjct: 139 gcgctcaagctctccgatcgcacctgcaccggcgtccccgcctcccacccgctctcccga 198
Query: 319 gatatccacatagagtctctttctttaacattccatgggcatgaccttattgtggattct 378
||||||||||||||||||||||| ||||| || ||||| |||||||||||||| ||||||
Sbjct: 199 gatatccacatagagtctctttcattaacgtttcatggccatgaccttattgtagattct 258
Query: 379 gatttggagctgaactacgggaggcgatacggtttgcttgggttgaatggctgtggaaaa 438
|| |||||||| ||||| |||||||| || |||||||| || | ||||||||||| |||
Sbjct: 259 gagttggagctcaactatgggaggcgttatggtttgctcggcctaaatggctgtgggaaa 318
Query: 439 tctactcttctcacagcaataggctgcagagaacttcctatccctgaacacatggacata 498
|||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 319 tctactctgctcaccgcgataggctgcagggaactccctatacctgaacacatggacata 378
Query: 499 taccatctaagccatgagattgaagcttctgacatgtctgcactgcaagccattgttagt 558
|||||||| | ||||||||| || ||||| ||||||||||| || ||||| ||||||||
Sbjct: 379 taccatctcacccatgagatcgaggcttcagacatgtctgcgctacaagctgttgttagt 438
Query: 559 tgtgacgaagaaagagtgaagttggaaaaggaagctgaaattttggctgcacaggatgat 618
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 439 tgtgacgaagaaagagtgaagttggaaaaggaagcggagattttggctgcacaggatgat 498
Query: 619 ggtggtggtgaagcattggagcgtgtttatgagcgtctagatgcaatggatgctggaact 678
||||||||||| || ||||| ||||| |||||||||||||| || || ||||| |||
Sbjct: 499 ggtggtggtgatgctttggatcgtgtatatgagcgtctagaagcgattgatgcatcaacc 558
Query: 679 gcagaaaagcgagctgctgaaattttatttggt 711
|| |||||||| |||||||| || |||| ||||
Sbjct: 559 gctgaaaagcgcgctgctgagatattatatggt 591
Score = 93.7 bits (47), Expect = 6e-017
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 116 ccatggtgtcggatgccagcaagaagaaggccgcccagaagaaggccgctgcggctgcca 175
||||||||||||| |||||||||||||||||||| ||||||||||| || || || ||||
Sbjct: 2 ccatggtgtcggacgccagcaagaagaaggccgcgcagaagaaggcggccgccgcagcca 61
Query: 176 agaggggaggcaagg 190
||||||||| |||||
Sbjct: 62 agaggggagccaagg 76
>gb|CF486037.1|CF486037 POL1_35_G03.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_G03_A002 3', mRNA sequence
Length = 506
Score = 428 bits (216), Expect = e-118
Identities = 278/296 (93%), Gaps = 2/296 (0%)
Strand = Plus / Plus
Query: 1708 attgagaccattgactccctggcggaggcactgaatgagtgggatggtggtttggtcttg 1767
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 5 attgagaccattgactccctggccgaggcactgaatgagtgggatggtggtttggttcta 64
Query: 1768 gtgagccatgatttcaggctgatcaaccaggttgctcaagagatttgggtgtgtgagaat 1827
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 65 gtgagccatgatttcaggctgatcaaccaggttgctcaagagatctgggtgtgtgagaat 124
Query: 1828 caggcggtgacaaggtgggaaggtgatatcatggatttcaaggcacacttgaagagcaag 1887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 caggcggtgacaaggtgggaaggtgatatcatggatttcaaggcacacttgaagagcaag 184
Query: 1888 gctggtttatctgattagagggctttttccagcaaccatgagctttttaactctgtatca 1947
||||||||||||||||||| ||| || || |||| |||||||||||||||||||||||||
Sbjct: 185 gctggtttatctgattagaaggc-ttgtctagcacccatgagctttttaactctgtatca 243
Query: 1948 cgaagtcccagttttccaatagcgaactatcagagttact-ttattgtatcggatt 2002
|||||||| | ||||||| |||| ||||||| ||| |||| ||||||||||||||
Sbjct: 244 cgaagtcctatttttccagtagcaaactatcggagatactgctattgtatcggatt 299
Score = 77.8 bits (39), Expect = 4e-012
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 2029 taccttatactacctggaatatttatttatata-tcttttgaaatgctattatgt 2082
|||||||||||||||||||| |||||||||||| | |||||||||||||||||||
Sbjct: 333 taccttatactacctggaatgtttatttatatatttttttgaaatgctattatgt 387
>gb|BF176826.1|BF176826 EM1_3_A07.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 392
Score = 424 bits (214), Expect = e-116
Identities = 268/286 (93%)
Strand = Plus / Plus
Query: 110 tcgacgccatggtgtcggatgccagcaagaagaaggccgcccagaagaaggccgctgcgg 169
||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||
Sbjct: 101 tcgacgccatggtgtcggaggccagcaagaagaaggccgctcagaagaaggccgccgcgg 160
Query: 170 ctgccaagaggggaggcaaggcctcggtggcgtcctcgtcgtcttcgtctgcggccgcgg 229
| || |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||
Sbjct: 161 ccgcgaagaggggaggcaaggccgcggtggcgtcctcatcgtcttcatctgcggccgcgg 220
Query: 230 ccgtcgataaggtggcgaacggcgtcgtggcgcttaagctatcggaccggacctgcaccg 289
||| |||||||| |||||||||||||| |||||| || ||||| ||||| ||||||||||
Sbjct: 221 ccgccgataaggcggcgaacggcgtcgcggcgctcaaactatcagaccgcacctgcaccg 280
Query: 290 gggtcctcgcgtctcacccgctttcccgggatatccacatagagtctctttctttaacat 349
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 281 gggtcctcgcgtctcacccgctctcccgcgatatccacatagagtctctttctttaacat 340
Query: 350 tccatgggcatgaccttattgtggattctgatttggagctgaacta 395
||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 341 tccatgggcatgaccttattgtggattctgagttggagctgaacta 386
>gb|CF483143.1|CF483143 POL1_12_C04.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_12_C04_A002 3', mRNA sequence
Length = 717
Score = 424 bits (214), Expect = e-116
Identities = 441/517 (85%)
Strand = Plus / Plus
Query: 1388 agcttatgactggtgaccttgctccattagatggcatggttcggcgccacaatcacctgc 1447
|||| ||||| ||||| || |||||||| || || ||||| |||| ||||||||| |||
Sbjct: 1 agctgatgacaggtgagctggctccattggacggtatggtgaggcggcacaatcacntgc 60
Query: 1448 gcattgcacagtaccatcagcatcttgcggacaagctggatctggacatgccggctctgg 1507
|||| ||||||| ||||||||| || || || |||||||| |||||||| |||| |||
Sbjct: 61 gcatcgcacagttccatcagcacctggcagagaagctggacctggacatctcggccctgc 120
Query: 1508 cttacatgatgaaggaataccctgggaccgaagaagagaagatgcgagctgctgttggca 1567
||||||||||||||||||||||||| ||||||||||| |||| |||| || || || |
Sbjct: 121 aatacatgatgaaggaataccctgggaacgaagaagagaggatgagagccgcagtcggta 180
Query: 1568 ggtttggcctatcaggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaa 1627
|||||| || ||||| ||||| |||||||||||||||||||| || || || ||||| |
Sbjct: 181 agtttgggctgtcagggaaggctcaggtgatgccaatgaggaacctgtcggacgggcaga 240
Query: 1628 ggagccgtgtcatctttgcatggttggcatataggcagccgcaactgctactgctcgatg 1687
||||||||||||||||||| ||| ||||||| ||||||||||| || || ||||| ||||
Sbjct: 241 ggagccgtgtcatctttgcgtggctggcatacaggcagccgcagctactgctgctggatg 300
Query: 1688 agccgacaaatcatttggacattgagaccattgactccctggcggaggcactgaatgagt 1747
|||| ||||| ||| | || || |||||||| |||||||| |||||||| ||||| ||||
Sbjct: 301 agccaacaaaccatctcgatatcgagaccatcgactccctagcggaggcgctgaacgagt 360
Query: 1748 gggatggtggtttggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaag 1807
|||| || ||| |||| ||||||||||||| |||||||||||| ||||||| ||||| |
Sbjct: 361 gggacggcggtctggtactggtgagccatgacttcaggctgatcgaccaggtcgctcatg 420
Query: 1808 agatttgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggatttca 1867
|||| ||||| |||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 421 agatctgggtttgtgagaatcaggcagtgactaggtgggaaggcgatatcatggatttca 480
Query: 1868 aggcacacttgaagagcaaggctggtttatctgatta 1904
||| ||| |||| ||||||||||||| ||||||||||
Sbjct: 481 aggaacatttgaggagcaaggctggtctatctgatta 517
>gb|CL158919.1|CL158919 104_348_10803882_116_31380_090 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10803882, DNA
sequence
Length = 721
Score = 414 bits (209), Expect = e-113
Identities = 268/285 (94%), Gaps = 2/285 (0%)
Strand = Plus / Plus
Query: 1719 tgactccctggcggaggcactgaatgagtgggatggtggtttggtcttggtgagccatga 1778
|||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 1 tgactccctggccgaggcactgaatgagtgggatggtggtttggttctagtgagccatga 60
Query: 1779 tttcaggctgatcaaccaggttgctcaagagatttgggtgtgtgagaatcaggcggtgac 1838
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 61 tttcaggctgatcaaccaggttgctcaagagatctgggtgtgtgagaatcaggcggtgac 120
Query: 1839 aaggtgggaaggtgatatcatggatttcaaggcacacttgaagagcaaggctggtttatc 1898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaggtgggaaggtgatatcatggatttcaaggcacacttgaagagcaaggctggtttatc 180
Query: 1899 tgattagagggctttttccagcaaccatgagctttttaactctgtatcacgaagtcccag 1958
|||||||| ||| || || |||||||||||||||||||||||||||||||||||||| |
Sbjct: 181 tgattagaaggc-ttgtctagcaaccatgagctttttaactctgtatcacgaagtcctat 239
Query: 1959 ttttccaatagcgaactatcagagttact-ttattgtatcggatt 2002
||||||| |||| ||||||| ||| |||| ||||||||||||||
Sbjct: 240 ttttccagtagcaaactatcggagatactgctattgtatcggatt 284
Score = 77.8 bits (39), Expect = 4e-012
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 2029 taccttatactacctggaatatttatttatata-tcttttgaaatgctattatgt 2082
|||||||||||||||||||| |||||||||||| | |||||||||||||||||||
Sbjct: 318 taccttatactacctggaatgtttatttatatatttttttgaaatgctattatgt 372
>gb|BG464950.1|BG464950 EM1_36_F04.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 286
Score = 404 bits (204), Expect = e-110
Identities = 266/284 (93%), Gaps = 2/284 (0%)
Strand = Plus / Plus
Query: 1687 gagccgacaaatcatttggacattgagaccattgactccctggcggaggcactgaatgag 1746
||||||||||| ||| |||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 gagccgacaaaccatctggatattgagaccattgactccctggccgaggcactgaatgag 60
Query: 1747 tgggatggtggtttggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaa 1806
||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgggatggtggtttggttctagtgagccatgatttcaggctgatcaaccaggttgctcaa 120
Query: 1807 gagatttgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggatttc 1866
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagatctgggtgtgt-agaatcaggcggtgacaaggtgggaaggtgatatcatggatttc 179
Query: 1867 aaggcacacttgaagagcaaggctggtttatctgattagagggctttttccagcaaccat 1926
|||||||||||||||||||||||||||||||||||||||| ||| || || |||||||||
Sbjct: 180 aaggcacacttgaagagcaaggctggtttatctgattagaaggc-ttgtctagcaaccat 238
Query: 1927 gagctttttaactctgtatcacgaagtcccagttttccaatagc 1970
|||||||||| ||||||||||||||||| | ||||||| ||||
Sbjct: 239 gagctttttacttctgtatcacgaagtcctatttttccagtagc 282
>gb|CD228875.1|CD228875 CCC1_10_H09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_10_H09_A007 5', mRNA sequence
Length = 378
Score = 400 bits (202), Expect = e-109
Identities = 253/270 (93%)
Strand = Plus / Plus
Query: 110 tcgacgccatggtgtcggatgccagcaagaagaaggccgcccagaagaaggccgctgcgg 169
||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||
Sbjct: 109 tcgacgccatggtgtcggaggccagcaagaagaaggccgctcagaagaaggccgccgcgg 168
Query: 170 ctgccaagaggggaggcaaggcctcggtggcgtcctcgtcgtcttcgtctgcggccgcgg 229
| || |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||
Sbjct: 169 ccgcgaagaggggaggcaaggccgcggtggcgtcctcatcgtcttcatctgcggccgcgg 228
Query: 230 ccgtcgataaggtggcgaacggcgtcgtggcgcttaagctatcggaccggacctgcaccg 289
||| |||||||| |||||||||||||| |||||| || ||||| ||||| ||||||||||
Sbjct: 229 ccgccgataaggcggcgaacggcgtcgcggcgctcaaactatcagaccgcacctgcaccg 288
Query: 290 gggtcctcgcgtctcacccgctttcccgggatatccacatagagtctctttctttaacat 349
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 289 gggtcctcgcgtctcacccgctctcccgcgatatccacatagagtctctttctttaacat 348
Query: 350 tccatgggcatgaccttattgtggattctg 379
||||||||||||||||||||||||||||||
Sbjct: 349 tccatgggcatgaccttattgtggattctg 378
Score = 42.1 bits (21), Expect = 0.20
Identities = 40/45 (88%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 5 ggagtcgagcacttgagtccccttttctccttcccttcacctccc 49
||||| |||||||||||| ||| || ||||| |||||||||||||
Sbjct: 6 ggagttgagcacttgagttcccctt-ctcctacccttcacctccc 49
>gb|CW336248.1|CW336248 104_835_11483487_116_36094_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11483487, DNA
sequence
Length = 673
Score = 396 bits (200), Expect = e-108
Identities = 389/452 (86%)
Strand = Plus / Minus
Query: 1453 gcacagtaccatcagcatcttgcggacaagctggatctggacatgccggctctggcttac 1512
||||||| ||||||||| || || || |||||||| |||||||| |||| ||| |||
Sbjct: 669 gcacagttccatcagcacctggcagagaagctggacctggacatctcggccctgcaatac 610
Query: 1513 atgatgaaggaataccctgggaccgaagaagagaagatgcgagctgctgttggcaggttt 1572
|||||||||||||||||||||| ||||||||||| |||| |||| || || || | ||||
Sbjct: 609 atgatgaaggaataccctgggaacgaagaagagaggatgagagccgcagtcggtaagttt 550
Query: 1573 ggcctatcaggaaaggcgcaggtgatgccaatgaggaatctttctgatgggcaaaggagc 1632
|| || ||||| ||||| |||||||||||||||||||| || || || ||||| ||||||
Sbjct: 549 gggctgtcagggaaggctcaggtgatgccaatgaggaacctgtcggacgggcagaggagc 490
Query: 1633 cgtgtcatctttgcatggttggcatataggcagccgcaactgctactgctcgatgagccg 1692
|||||||||||||| ||| ||||||| ||||||||||| || || ||||| ||||||||
Sbjct: 489 cgtgtcatctttgcgtggctggcatacaggcagccgcagctactgctgctggatgagcca 430
Query: 1693 acaaatcatttggacattgagaccattgactccctggcggaggcactgaatgagtgggat 1752
||||| ||| | || || |||||||| |||||||| |||||||| ||||| ||||||||
Sbjct: 429 acaaaccatctcgatatcgagaccatcgactccctagcggaggcgctgaacgagtgggac 370
Query: 1753 ggtggtttggtcttggtgagccatgatttcaggctgatcaaccaggttgctcaagagatt 1812
|| ||| |||| ||||||||||||| |||||||||||||||||||| ||||| |||||
Sbjct: 369 ggcggtctggtactggtgagccatgacttcaggctgatcaaccaggtcgctcatgagatc 310
Query: 1813 tgggtgtgtgagaatcaggcggtgacaaggtgggaaggtgatatcatggatttcaaggca 1872
||||| |||||||||||||| ||||| ||||||||||| ||||||||||||||||||| |
Sbjct: 309 tgggtttgtgagaatcaggcagtgactaggtgggaaggcgatatcatggatttcaaggaa 250
Query: 1873 cacttgaagagcaaggctggtttatctgatta 1904
|| |||| ||||||||||||| ||||||||||
Sbjct: 249 catttgaggagcaaggctggtctatctgatta 218
>gb|BF176990.1|BF176990 EM1_2_C01.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 408
Score = 392 bits (198), Expect = e-107
Identities = 254/270 (94%), Gaps = 2/270 (0%)
Strand = Plus / Plus
Query: 1734 ggcactgaatgagtgggatggtggtttggtcttggtgagccatgatttcaggctgatcaa 1793
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 5 ggcactgaatgagtgggatggtggtttggttctagtgagccatgatttcaggctgatcaa 64
Query: 1794 ccaggttgctcaagagatttgggtgtgtgagaatcaggcggtgacaaggtgggaaggtga 1853
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 ccaggttgctcaagagatctgggtgtgtgagaatcaggcggtgacaaggtgggaaggtga 124
Query: 1854 tatcatggatttcaaggcacacttgaagagcaaggctggtttatctgattagagggcttt 1913
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 125 tatcatggatttcaaggcacacttgaagagcaaggctggtttatctgattagaaggc-tt 183
Query: 1914 ttccagcaaccatgagctttttaactctgtatcacgaagtcccagttttccaatagcgaa 1973
|| |||||||||||||||||||||||||||||||||||||| | ||||||| |||| ||
Sbjct: 184 gtctagcaaccatgagctttttaactctgtatcacgaagtcctatttttccagtagcaaa 243
Query: 1974 ctatcagagttact-ttattgtatcggatt 2002
||||| ||| |||| ||||||||||||||
Sbjct: 244 ctatcggagatactgctattgtatcggatt 273
Score = 77.8 bits (39), Expect = 4e-012
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 2029 taccttatactacctggaatatttatttatata-tcttttgaaatgctattatgt 2082
|||||||||||||||||||| |||||||||||| | |||||||||||||||||||
Sbjct: 307 taccttatactacctggaatgtttatttatatatttttttgaaatgctattatgt 361
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 664,163
Number of Sequences: 832831
Number of extensions: 664163
Number of successful extensions: 187036
Number of sequences better than 0.5: 88
Number of HSP's better than 0.5 without gapping: 87
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 186736
Number of HSP's gapped (non-prelim): 203
length of query: 2083
length of database: 491,359,669
effective HSP length: 20
effective length of query: 2063
effective length of database: 474,703,049
effective search space: 979312390087
effective search space used: 979312390087
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)