BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= L46398.2.1
(1263 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG049032.1|BG049032 OV1_22_D05.g1_A002 Ovary 1 (OV1) Sor... 632 e-179
gb|BG048737.1|BG048737 OV1_22_D05.b1_A002 Ovary 1 (OV1) Sor... 577 e-163
gb|CW034003.1|CW034003 104_263_10502289_114_30359 Sorghum m... 285 5e-075
gb|CW034004.1|CW034004 104_263_10502289_115_30360 Sorghum m... 285 5e-075
gb|CW365810.1|CW365810 fsbb001f038i06k0 Sorghum methylation... 285 5e-075
gb|BE918053.1|BE918053 OV1_1_C11.b1_A002 Ovary 1 (OV1) Sorg... 285 5e-075
gb|BG054385.1|BG054385 OV2_3_G06.b1_A002 Ovary 2 (OV2) Sorg... 285 5e-075
gb|BG357222.1|BG357222 OV2_11_C11.b1_A002 Ovary 2 (OV2) Sor... 285 5e-075
gb|CW081771.1|CW081771 104_422_10942807_114_32316_032 Sorgh... 283 2e-074
gb|CW081772.1|CW081772 104_422_10942807_114_32345_032 Sorgh... 283 2e-074
gb|CW344565.1|CW344565 104_847_11488020_148_36203_044 Sorgh... 283 2e-074
gb|BG948060.1|BG948060 IP1_8_H04.b1_A002 Immature pannicle ... 283 2e-074
gb|BI098309.1|BI098309 IP1_30_G10.b1_A002 Immature pannicle... 283 2e-074
gb|U49734.1|SBU49734 Sorghum bicolor MADS box transcription... 283 2e-074
gb|BE918762.1|BE918762 OV1_4_F11.b1_A002 Ovary 1 (OV1) Sorg... 278 1e-072
gb|CW293027.1|CW293027 104_773_11414425_148_35591_009 Sorgh... 224 2e-056
gb|CW380917.1|CW380917 fsbb001f062a07k0 Sorghum methylation... 220 2e-055
gb|CW407708.1|CW407708 fsbb001f101e21k0 Sorghum methylation... 218 1e-054
gb|CW332085.1|CW332085 104_829_11481239_148_36028_086 Sorgh... 196 4e-048
gb|CW405640.1|CW405640 fsbb001f098e17f0 Sorghum methylation... 196 4e-048
gb|BM324751.1|BM324751 PIC1_35_B11.b1_A002 Pathogen-infecte... 196 4e-048
gb|CD429087.1|CD429087 ETH1_2_E10.g1_A002 Ethylene-treated ... 196 4e-048
gb|CW210331.1|CW210331 104_640_11189738_116_37000_003 Sorgh... 194 1e-047
gb|BF657151.1|BF657151 OV2_21_D05.b1_A002 Ovary 2 (OV2) Sor... 190 2e-046
gb|CW461504.1|CW461504 fsbb001f209d06f0 Sorghum methylation... 178 8e-043
gb|CW481370.1|CW481370 fsbb001f240o12f0 Sorghum methylation... 178 8e-043
gb|BG357245.1|BG357245 OV2_11_F01.b1_A002 Ovary 2 (OV2) Sor... 178 8e-043
gb|CW214921.1|CW214921 104_647_11194268_116_37464_080 Sorgh... 176 3e-042
gb|CW255743.1|CW255743 104_720_11226403_116_35130_072 Sorgh... 176 3e-042
gb|AW745210.1|AW745210 LG1_387_D10.b1_A002 Light Grown 1 (L... 176 3e-042
gb|BG357712.1|BG357712 OV2_29_D08.b1_A002 Ovary 2 (OV2) Sor... 176 3e-042
gb|BG357882.1|BG357882 OV2_31_D08.b1_A002 Ovary 2 (OV2) Sor... 176 3e-042
gb|BG649748.1|BG649748 RHIZ2_83_B06.b1_A003 Rhizome2 (RHIZ2... 176 3e-042
gb|CW171069.1|CW171069 104_581_11155545_116_36517_035 Sorgh... 174 1e-041
gb|CW280818.1|CW280818 104_756_11407834_116_35450_043 Sorgh... 172 5e-041
gb|CW296811.1|CW296811 104_778_11461713_116_35630_035 Sorgh... 172 5e-041
gb|AY188330.1| Sorghum bicolor phytochelatin synthetase-lik... 172 5e-041
gb|CW181349.1|CW181349 104_596_11163460_116_36650_010 Sorgh... 170 2e-040
gb|CW184444.1|CW184444 104_600_11165153_148_36682_067 Sorgh... 170 2e-040
gb|CL166695.1|CL166695 104_362_10809549_114_31798_381 Sorgh... 168 8e-040
gb|CW327830.1|CW327830 104_823_11478965_116_35975_019 Sorgh... 168 8e-040
gb|CW327831.1|CW327831 104_823_11478965_148_35976_019 Sorgh... 168 8e-040
gb|CW486759.1|CW486759 fsbb001f252d14f0 Sorghum methylation... 168 8e-040
gb|CW486760.1|CW486760 fsbb001f252d14k0 Sorghum methylation... 168 8e-040
gb|BE918857.1|BE918857 FM1_1_A12.b1_A003 Floral-Induced Mer... 168 8e-040
gb|BE918862.1|BE918862 FM1_1_B06.b1_A003 Floral-Induced Mer... 168 8e-040
gb|BF317935.1|BF317935 OV1_9_F09.b1_A002 Ovary 1 (OV1) Sorg... 168 8e-040
gb|BF657168.1|BF657168 OV2_21_E10.b1_A002 Ovary 2 (OV2) Sor... 168 8e-040
gb|BF657564.1|BF657564 OV2_23_G05.b1_A002 Ovary 2 (OV2) Sor... 168 8e-040
gb|BF657695.1|BF657695 OV2_20_F03.b1_A002 Ovary 2 (OV2) Sor... 168 8e-040
gb|BF657741.1|BF657741 OV2_17_D12.b1_A002 Ovary 2 (OV2) Sor... 168 8e-040
gb|BG240312.1|BG240312 OV1_20_E03.b1_A002 Ovary 1 (OV1) Sor... 168 8e-040
gb|BG412023.1|BG412023 OV2_37_A12.b1_A002 Ovary 2 (OV2) Sor... 168 8e-040
gb|AY827471.1| Sorghum bicolor MADS box transcription facto... 163 5e-038
gb|CW409217.1|CW409217 fsbb001f103g24f0 Sorghum methylation... 161 2e-037
gb|CF431741.1|CF431741 NIT1_10_D03.g1_A002 Nitrogen-deficie... 161 2e-037
gb|CW230669.1|CW230669 104_679_11210696_116_37485_022 Sorgh... 159 8e-037
gb|CD233526.1|CD233526 SS1_2_G04.g1_A012 Salt-stressed seed... 159 8e-037
gb|CD431694.1|CD431694 ETH1_10_G05.g1_A002 Ethylene-treated... 159 8e-037
gb|CF480443.1|CF480443 POL1_65_G02.g1_A002 Pollen Sorghum b... 159 8e-037
gb|CW359630.1|CW359630 fsbb001f027f15k0 Sorghum methylation... 151 2e-034
gb|BG240086.1|BG240086 OV1_17_G05.b1_A002 Ovary 1 (OV1) Sor... 151 2e-034
gb|BG241308.1|BG241308 OV1_40_G05.b1_A002 Ovary 1 (OV1) Sor... 151 2e-034
gb|U32110.1|SBU32110 Sorghum bicolor putative MADS box prot... 151 2e-034
gb|CW322676.1|CW322676 104_816_11476224_116_35954_088 Sorgh... 149 7e-034
gb|CW386489.1|CW386489 fsbb001f070g18k0 Sorghum methylation... 149 7e-034
gb|CW096314.1|CW096314 104_461_11001822_116_34335_017 Sorgh... 141 2e-031
gb|AY597522.1| Sorghum bicolor leafy hull sterile 1 (LHS1) ... 141 2e-031
gb|CL167141.1|CL167141 104_363_10809866_114_31800_314 Sorgh... 137 3e-030
gb|CW067285.1|CW067285 104_314_10524173_115_30127 Sorghum m... 137 3e-030
gb|CW112067.1|CW112067 104_485_11104678_116_34538_083 Sorgh... 137 3e-030
gb|CW128198.1|CW128198 104_509_11113875_148_34748_004 Sorgh... 137 3e-030
gb|CW273795.1|CW273795 104_746_11404091_148_35366_040 Sorgh... 137 3e-030
gb|BE918068.1|BE918068 OV1_1_E07.b1_A002 Ovary 1 (OV1) Sorg... 137 3e-030
gb|BG054384.1|BG054384 OV2_3_G05.b1_A002 Ovary 2 (OV2) Sorg... 137 3e-030
gb|BG412085.1|BG412085 OV2_37_G09.b1_A002 Ovary 2 (OV2) Sor... 137 3e-030
gb|CW032589.1|CW032589 104_261_10501470_114_30363 Sorghum m... 135 1e-029
gb|CL181374.1|CL181374 104_392_10896713_116_31926_089 Sorgh... 119 7e-025
gb|CL181375.1|CL181375 104_392_10896713_148_31925_089 Sorgh... 119 7e-025
gb|CW023615.1|CW023615 104_163_10432547_1_30001 Sorghum met... 119 7e-025
gb|CW032483.1|CW032483 104_261_10501401_115_30364 Sorghum m... 119 7e-025
gb|CD463019.1|CD463019 ETH1_41_H12.g1_A002 Ethylene-treated... 119 7e-025
gb|BF586649.1|BF586649 FM1_29_H03.b1_A003 Floral-Induced Me... 115 1e-023
gb|BF705575.1|BF705575 RHIZ2_4_H03.b1_A003 Rhizome2 (RHIZ2)... 111 2e-022
gb|BZ694660.1|BZ694660 SP__Ba0050A11.f SP__Ba Sorghum propi... 109 6e-022
gb|CW788871.1|CW788871 SP__Ba0050A11.f SP__Ba Sorghum propi... 109 6e-022
gb|CW195540.1|CW195540 104_619_11180693_116_36805_027 Sorgh... 107 3e-021
gb|CW195541.1|CW195541 104_619_11180693_148_36801_027 Sorgh... 107 3e-021
gb|CW296060.1|CW296060 104_777_11461289_148_35626_069 Sorgh... 103 4e-020
gb|CW297229.1|CW297229 104_779_11461931_116_35636_042 Sorgh... 103 4e-020
gb|CW452258.1|CW452258 fsbb001f192l07k0 Sorghum methylation... 103 4e-020
gb|AW681038.1|AW681038 WS1_8_D09.b1_A002 Water-stressed 1 (... 103 4e-020
gb|BG739474.1|BG739474 EM1_81_D03.b1_A002 Embryo 1 (EM1) So... 103 4e-020
gb|BM324114.1|BM324114 PIC1_24_D02.b1_A002 Pathogen-infecte... 103 4e-020
gb|BM325449.1|BM325449 PIC1_44_F08.b1_A002 Pathogen-infecte... 103 4e-020
gb|CB927715.1|CB927715 ABA1_27_E04.g1_A012 Abscisic acid-tr... 103 4e-020
gb|CD431870.1|CD431870 ETH1_11_B03.g1_A002 Ethylene-treated... 103 4e-020
gb|CF486426.1|CF486426 POL1_37_D04.g1_A002 Pollen Sorghum b... 103 4e-020
gb|CN135385.1|CN135385 OX1_32_B05.g1_A002 Oxidatively-stres... 103 4e-020
gb|CL171822.1|CL171822 104_373_10889698_148_31776_370 Sorgh... 101 2e-019
gb|CW249676.1|CW249676 104_711_11222976_116_35044_088 Sorgh... 101 2e-019
gb|CW249677.1|CW249677 104_711_11222976_148_35048_088 Sorgh... 101 2e-019
gb|CW480188.1|CW480188 fsbb001f239c02f0 Sorghum methylation... 101 2e-019
gb|CW480189.1|CW480189 fsbb001f239c02k0 Sorghum methylation... 101 2e-019
gb|CW040533.1|CW040533 104_274_10506199_116_30433 Sorghum m... 96 1e-017
gb|CW040534.1|CW040534 104_274_10506199_116_30479 Sorghum m... 96 1e-017
gb|CW040535.1|CW040535 104_274_10506199_116_30481 Sorghum m... 96 1e-017
gb|CW472381.1|CW472381 fsbb001f227e20f0 Sorghum methylation... 96 1e-017
gb|CW498786.1|CW498786 fsbb001f293d08f0 Sorghum methylation... 96 1e-017
gb|CF487280.1|CF487280 POL1_42_G07.g1_A002 Pollen Sorghum b... 96 1e-017
gb|CW142324.1|CW142324 104_533_11136795_116_34938_006 Sorgh... 94 4e-017
gb|CW142325.1|CW142325 104_533_11136795_148_34942_006 Sorgh... 94 4e-017
gb|CW275678.1|CW275678 104_749_11405089_148_35390_013 Sorgh... 94 4e-017
gb|CW448512.1|CW448512 fsbb001f182c17f0 Sorghum methylation... 94 4e-017
gb|CW448513.1|CW448513 fsbb001f182c17k0 Sorghum methylation... 94 4e-017
gb|CW502333.1|CW502333 fsbb001f298j20f0 Sorghum methylation... 94 4e-017
gb|CW502334.1|CW502334 fsbb001f298j20k0 Sorghum methylation... 94 4e-017
gb|CW329596.1|CW329596 104_826_11479928_116_35994_028 Sorgh... 92 1e-016
gb|CW329597.1|CW329597 104_826_11479928_148_35993_028 Sorgh... 92 1e-016
gb|CW393458.1|CW393458 fsbb001f080i11k0 Sorghum methylation... 92 1e-016
gb|CW457553.1|CW457553 fsbb001f203g17k0 Sorghum methylation... 92 1e-016
gb|BG240232.1|BG240232 OV1_19_E04.b1_A002 Ovary 1 (OV1) Sor... 90 6e-016
gb|CW457552.1|CW457552 fsbb001f203g17f0 Sorghum methylation... 84 4e-014
gb|CW472382.1|CW472382 fsbb001f227e20k0 Sorghum methylation... 82 1e-013
gb|CL171821.1|CL171821 104_373_10889698_116_31777_370 Sorgh... 80 6e-013
gb|CW296923.1|CW296923 104_778_11461772_116_35631_066 Sorgh... 80 6e-013
gb|CW296924.1|CW296924 104_778_11461772_148_35635_066 Sorgh... 80 6e-013
gb|BF704612.1|BF704612 FM1_49_C04.b1_A003 Floral-Induced Me... 80 6e-013
gb|CW296059.1|CW296059 104_777_11461289_116_35622_069 Sorgh... 76 9e-012
gb|CL150340.1|CL150340 104_332_10778461_116_31358_013 Sorgh... 74 3e-011
gb|CW088554.1|CW088554 104_433_10948220_114_32568_072 Sorgh... 74 3e-011
gb|CW088555.1|CW088555 104_433_10948220_116_32578_072 Sorgh... 74 3e-011
gb|CW422054.1|CW422054 fsbb001f131c13f0 Sorghum methylation... 74 3e-011
gb|CF430206.1|CF430206 PH1_26_B03.g1_A002 Phosphorous-defic... 74 3e-011
gb|CW072287.1|CW072287 104_325_10592182_114_30538 Sorghum m... 70 5e-010
gb|CW214896.1|CW214896 104_647_11194255_148_37166_032 Sorgh... 70 5e-010
gb|CW411862.1|CW411862 fsbb001f107d12k0 Sorghum methylation... 70 5e-010
gb|CW096315.1|CW096315 104_461_11001822_148_34331_017 Sorgh... 68 2e-009
gb|BF421169.1|BF421169 FM1_6_C07.b1_A003 Floral-Induced Mer... 66 9e-009
gb|CL167956.1|CL167956 104_365_10810460_116_31805_140 Sorgh... 64 3e-008
gb|CW064669.1|CW064669 104_311_10522699_114_30118 Sorghum m... 64 3e-008
gb|CW142648.1|CW142648 104_534_11136977_148_34944_077 Sorgh... 64 3e-008
gb|CW147117.1|CW147117 104_540_11139346_116_34999_043 Sorgh... 64 3e-008
gb|CW199961.1|CW199961 104_625_11183794_116_36864_043 Sorgh... 64 3e-008
gb|CW248956.1|CW248956 104_710_11222585_148_35035_071 Sorgh... 64 3e-008
gb|CW251622.1|CW251622 104_714_11224036_116_35067_010 Sorgh... 64 3e-008
gb|CW426063.1|CW426063 fsbb001f137e12f0 Sorghum methylation... 64 3e-008
gb|CW426064.1|CW426064 fsbb001f137e12k0 Sorghum methylation... 64 3e-008
gb|CW492794.1|CW492794 fsbb001f283e05k0 Sorghum methylation... 64 3e-008
gb|CD432822.1|CD432822 ETH1_33_F08.g1_A002 Ethylene-treated... 64 3e-008
gb|CL176346.1|CL176346 104_382_10893067_116_31763_283 Sorgh... 62 1e-007
gb|AW678464.1|AW678464 WS1_16_D12.b1_A002 Water-stressed 1 ... 62 1e-007
gb|AW678480.1|AW678480 WS1_16_D03.b1_A002 Water-stressed 1 ... 62 1e-007
gb|AW746875.1|AW746875 WS1_56_C05.b1_A002 Water-stressed 1 ... 62 1e-007
gb|AW924005.1|AW924005 WS1_32_E02.b1_A002 Water-stressed 1 ... 62 1e-007
gb|AW924046.1|AW924046 WS1_49_D06.b1_A002 Water-stressed 1 ... 62 1e-007
gb|BE365263.1|BE365263 PI1_26_D10.b1_A002 Pathogen induced ... 62 1e-007
gb|BE600878.1|BE600878 PI1_92_D01.b1_A002 Pathogen induced ... 62 1e-007
gb|BE601014.1|BE601014 PI1_95_H02.b1_A002 Pathogen induced ... 62 1e-007
gb|BG355470.1|BG355470 EM1_16_H03.b1_A002 Embryo 1 (EM1) So... 62 1e-007
gb|BG933507.1|BG933507 WS1_4_C03.b1_A002 Water-stressed 1 (... 62 1e-007
gb|BM323902.1|BM323902 PIC1_29_A07.b1_A002 Pathogen-infecte... 62 1e-007
gb|BM324399.1|BM324399 PIC1_27_G12.b1_A002 Pathogen-infecte... 62 1e-007
gb|CF484314.1|CF484314 POL1_4_B10.g1_A002 Pollen Sorghum bi... 62 1e-007
gb|CN129656.1|CN129656 RHOH1_36_D08.g1_A002 Acid- and alkal... 62 1e-007
gb|CN132011.1|CN132011 OX1_3_C05.g1_A002 Oxidatively-stress... 62 1e-007
gb|CN132026.1|CN132026 OX1_3_D10.g1_A002 Oxidatively-stress... 62 1e-007
gb|CN134777.1|CN134777 OX1_28_A03.g1_A002 Oxidatively-stres... 62 1e-007
gb|CN135407.1|CN135407 OX1_32_D03.g1_A002 Oxidatively-stres... 62 1e-007
gb|CW034880.1|CW034880 104_265_10502824_115_30379 Sorghum m... 60 5e-007
gb|CW117952.1|CW117952 104_494_11107937_148_34681_075 Sorgh... 60 5e-007
gb|CD432530.1|CD432530 ETH1_30_C08.g1_A002 Ethylene-treated... 60 5e-007
gb|CL170087.1|CL170087 104_370_10813531_116_31789_235 Sorgh... 58 2e-006
gb|CW302656.1|CW302656 104_786_11464832_148_35669_018 Sorgh... 58 2e-006
gb|CW378066.1|CW378066 fsbb001f056k18f0 Sorghum methylation... 58 2e-006
gb|CW393457.1|CW393457 fsbb001f080i11f0 Sorghum methylation... 58 2e-006
gb|CW063376.1|CW063376 104_309_10521968_114_30136 Sorghum m... 56 8e-006
gb|CW273794.1|CW273794 104_746_11404091_116_35362_040 Sorgh... 56 8e-006
gb|CW327344.1|CW327344 104_823_11478696_116_35978_096 Sorgh... 56 8e-006
gb|CW372294.1|CW372294 fsbb001f048c08f0 Sorghum methylation... 56 8e-006
gb|CW489948.1|CW489948 fsbb001f275c14k0 Sorghum methylation... 56 8e-006
gb|BE596704.1|BE596704 PI1_58_F04.b1_A002 Pathogen induced ... 56 8e-006
gb|BM323459.1|BM323459 PIC1_19_E07.b1_A002 Pathogen-infecte... 56 8e-006
gb|CF432922.1|CF432922 NIT1_19_H01.g1_A002 Nitrogen-deficie... 56 8e-006
gb|CW093595.1|CW093595 104_456_10999867_148_37470_068 Sorgh... 54 3e-005
gb|CW161335.1|CW161335 104_568_11150361_148_36430_043 Sorgh... 54 3e-005
gb|CW209670.1|CW209670 104_639_11189376_116_36992_084 Sorgh... 54 3e-005
gb|CW209671.1|CW209671 104_639_11189376_148_36991_084 Sorgh... 54 3e-005
gb|BZ627051.1|BZ627051 ih50a03.b1 WGS-SbicolorF (DH5a methy... 52 1e-004
gb|CL154141.1|CL154141 104_339_10781190_116_31372_054 Sorgh... 52 1e-004
gb|CW093915.1|CW093915 104_457_11000039_148_37474_092 Sorgh... 52 1e-004
gb|CW128544.1|CW128544 104_510_11114063_148_34754_094 Sorgh... 52 1e-004
gb|CW166689.1|CW166689 104_575_11153189_116_36837_021 Sorgh... 52 1e-004
gb|CW320373.1|CW320373 104_813_11474980_148_35895_010 Sorgh... 52 1e-004
gb|CW061066.1|CW061066 104_304_10520200_114_30143 Sorghum m... 48 0.002
gb|CW064670.1|CW064670 104_311_10522699_115_30121 Sorghum m... 48 0.002
gb|CW165612.1|CW165612 104_574_11152600_116_36481_064 Sorgh... 48 0.002
gb|CW177086.1|CW177086 104_590_11158834_148_36596_043 Sorgh... 48 0.002
gb|CW206089.1|CW206089 104_634_11187411_148_36952_004 Sorgh... 48 0.002
gb|CW249262.1|CW249262 104_711_11222752_116_35042_064 Sorgh... 48 0.002
gb|CW249263.1|CW249263 104_711_11222752_148_35046_064 Sorgh... 48 0.002
gb|CW251623.1|CW251623 104_714_11224036_148_35071_010 Sorgh... 48 0.002
gb|CW462985.1|CW462985 fsbb001f211f24f0 Sorghum methylation... 48 0.002
gb|CW465659.1|CW465659 fsbb001f216i10f0 Sorghum methylation... 48 0.002
gb|CW502569.1|CW502569 fsbb001f298p16f0 Sorghum methylation... 48 0.002
gb|CW321180.1|CW321180 104_814_11475408_148_35939_090 Sorgh... 44 0.031
gb|BZ627383.1|BZ627383 ih52b03.g1 WGS-SbicolorF (DH5a methy... 42 0.12
gb|CL173100.1|CL173100 104_376_10890649_116_31795_169 Sorgh... 42 0.12
gb|CL173101.1|CL173101 104_376_10890649_148_31794_169 Sorgh... 42 0.12
gb|CW429541.1|CW429541 fsbb001f142n16k0 Sorghum methylation... 42 0.12
gb|H55012.1|H55012 HHU68b Sorghum bicolor cv. TX430 Sorghum... 42 0.12
gb|AW672249.1|AW672249 LG1_358_H04.b1_A002 Light Grown 1 (L... 42 0.12
gb|AW678187.1|AW678187 WS1_13_F04.g1_A002 Water-stressed 1 ... 42 0.12
gb|BF656271.1|BF656271 FM1_44_C02.g1_A003 Floral-Induced Me... 42 0.12
gb|CD426208.1|CD426208 SA1_19_D07.b1_A002 Salicylic acid-tr... 42 0.12
gb|CD427746.1|CD427746 ETH1_34_B02.b1_A002 Ethylene-treated... 42 0.12
gb|CD427772.1|CD427772 ETH1_34_A05.b1_A002 Ethylene-treated... 42 0.12
gb|CD428825.1|CD428825 ETH1_36_B04.g1_A002 Ethylene-treated... 42 0.12
gb|CD428353.1|CD428353 ETH1_31_E02.b1_A002 Ethylene-treated... 42 0.12
gb|CD430323.1|CD430323 ETH1_18_C08.b1_A002 Ethylene-treated... 42 0.12
gb|CD430468.1|CD430468 ETH1_19_G04.b1_A002 Ethylene-treated... 42 0.12
gb|CD431173.1|CD431173 ETH1_7_A06.b1_A002 Ethylene-treated ... 42 0.12
gb|CD463696.1|CD463696 ETH1_46_H12.b1_A002 Ethylene-treated... 42 0.12
gb|CD463831.1|CD463831 ETH1_46_H12.g1_A002 Ethylene-treated... 42 0.12
gb|CF429443.1|CF429443 PH1_22_F05.b1_A002 Phosphorous-defic... 42 0.12
gb|CN124830.1|CN124830 RHOH1_7_D10.b1_A002 Acid- and alkali... 42 0.12
gb|CN124904.1|CN124904 RHOH1_7_D10.g1_A002 Acid- and alkali... 42 0.12
gb|CN126126.1|CN126126 RHOH1_15_G04.b1_A002 Acid- and alkal... 42 0.12
gb|CN126213.1|CN126213 RHOH1_15_G04.g1_A002 Acid- and alkal... 42 0.12
gb|CN133464.1|CN133464 OX1_12_H07.b1_A002 Oxidatively-stres... 42 0.12
gb|CN133546.1|CN133546 OX1_12_H07.g1_A002 Oxidatively-stres... 42 0.12
gb|CN133623.1|CN133623 OX1_17_G09.b1_A002 Oxidatively-stres... 42 0.12
gb|CN133706.1|CN133706 OX1_17_G09.g1_A002 Oxidatively-stres... 42 0.12
gb|CN133793.1|CN133793 OX1_18_H04.b1_A002 Oxidatively-stres... 42 0.12
gb|CN134264.1|CN134264 OX1_25_G03.b1_A002 Oxidatively-stres... 42 0.12
gb|CN134347.1|CN134347 OX1_25_G03.g1_A002 Oxidatively-stres... 42 0.12
gb|CN135441.1|CN135441 OX1_32_G06.g1_A002 Oxidatively-stres... 42 0.12
gb|CN144031.1|CN144031 WOUND1_19_F10.g1_A002 Wounded leaves... 42 0.12
gb|CN144199.1|CN144199 WOUND1_20_F08.g1_A002 Wounded leaves... 42 0.12
gb|CN144881.1|CN144881 WOUND1_25_B05.g1_A002 Wounded leaves... 42 0.12
gb|CN146275.1|CN146275 WOUND1_39_F06.b1_A002 Wounded leaves... 42 0.12
gb|CN146355.1|CN146355 WOUND1_39_F06.g1_A002 Wounded leaves... 42 0.12
gb|CN146365.1|CN146365 WOUND1_39_G06.g1_A002 Wounded leaves... 42 0.12
gb|CN146656.1|CN146656 WOUND1_42_G11.g1_A002 Wounded leaves... 42 0.12
gb|CN146987.1|CN146987 WOUND1_46_D08.b1_A002 Wounded leaves... 42 0.12
gb|CN147039.1|CN147039 WOUND1_46_D08.g1_A002 Wounded leaves... 42 0.12
gb|CN147194.1|CN147194 WOUND1_48_F02.b1_A002 Wounded leaves... 42 0.12
gb|CN147278.1|CN147278 WOUND1_48_F02.g1_A002 Wounded leaves... 42 0.12
gb|CN148408.1|CN148408 WOUND1_56_F11.b1_A002 Wounded leaves... 42 0.12
gb|CN148420.1|CN148420 WOUND1_56_H07.b1_A002 Wounded leaves... 42 0.12
gb|CN148474.1|CN148474 WOUND1_56_F11.g1_A002 Wounded leaves... 42 0.12
gb|CN148485.1|CN148485 WOUND1_56_H07.g1_A002 Wounded leaves... 42 0.12
gb|CN149978.1|CN149978 WOUND1_66_D04.b1_A002 Wounded leaves... 42 0.12
gb|CN150647.1|CN150647 WOUND1_70_C12.g1_A002 Wounded leaves... 42 0.12
gb|CA408292.1|CA408292 PRC-0038 pRC Sorghum halepense cDNA ... 42 0.12
gb|CX612522.1|CX612522 GABR1_2_H08.g1_A002 GA- or brassinol... 42 0.12
gb|CX614259.1|CX614259 GABR1_13_B04.b1_A002 GA- or brassino... 42 0.12
gb|CX614343.1|CX614343 GABR1_13_B04.g1_A002 GA- or brassino... 42 0.12
gb|CX622378.1|CX622378 GABR1_63_D03.g2_A002 GA- or brassino... 42 0.12
gb|CX622775.1|CX622775 GABR1_65_H11.g1_A002 GA- or brassino... 42 0.12
gb|CX623060.1|CX623060 GABR1_67_B09.g1_A002 GA- or brassino... 42 0.12
gb|CL176813.1|CL176813 104_383_10893378_148_31772_210 Sorgh... 40 0.49
gb|CW023530.1|CW023530 104_163_10432498_5_30009 Sorghum met... 40 0.49
gb|CW235228.1|CW235228 104_690_11214870_148_37412_023 Sorgh... 40 0.49
gb|CW260091.1|CW260091 104_726_11228779_116_35192_070 Sorgh... 40 0.49
>gb|BG049032.1|BG049032 OV1_22_D05.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 493
Score = 632 bits (319), Expect = e-179
Identities = 436/472 (92%), Gaps = 6/472 (1%)
Strand = Plus / Plus
Query: 565 aaggaattgcagcagctagagaaacagctagaatgtgctttgtcacaggcaagacagaga 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 aaggaattgcagcagctagagaaacagctagaatgtgctttgtcacaggcaagacagaga 63
Query: 625 aagacgcaagttatgatggagcaagtggaagagcttcgcagaacggagcgtcacctggga 684
||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 64 aagacacaacttatgatggagcaagtggaagagcttcgcagaaaggagcgtcacctggga 123
Query: 685 gaaatgaacaggcaactcaaacacaagctcgaagctgaaggctgtagcaactacacaacc 744
||||||||||||||||||||||||||||| ||||||||||| | ||||||||||| ||||
Sbjct: 124 gaaatgaacaggcaactcaaacacaagcttgaagctgaaggttctagcaactacagaacc 183
Query: 745 ttgcagcatgccgcctgctggccagctcccggcggcaccatcgtggagcatgacggcgcc 804
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ttgcagcatgccgccgcctggccagctcccggcggcaccatcgtggagcatgacggcgcc 243
Query: 805 acctatcaagtgcatccgcctgcccactcagttgctatggactgtgaacccactctgcaa 864
|| ||||| || ||||| ||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 244 acgtatcatgttcatccacctgctcactcagttgctatagactgtgaacccactctgcaa 303
Query: 865 atcgggtaccctcatcaccagtttccgccccctg---aggcagtcaataatatcccaagg 921
|| |||||||||||||||||||||| ||| ||| |||||| ||||||||||||||||
Sbjct: 304 attgggtaccctcatcaccagtttctgccttctgatcaggcagccaataatatcccaagg 363
Query: 922 agcgccgccacaggcgagaacaacttcatgctgggatgggttctttgagttcttctgtta 981
| |||| || |||||||||||||||||||||||||||||||||||||||| |||| | |
Sbjct: 364 aacgcccccggaggcgagaacaacttcatgctgggatgggttctttgagttgttctctca 423
Query: 982 atccatccatcagatgg--atccatgttgaaaccaataaaaggcattcagtg 1031
||||||||||||||||| | |||||| |||| ||||||||||||||||||
Sbjct: 424 atccatccatcagatgggcaatcatgtt-aaacaaataaaaggcattcagtg 474
>gb|BG048737.1|BG048737 OV1_22_D05.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 407
Score = 577 bits (291), Expect = e-163
Identities = 353/373 (94%), Gaps = 3/373 (0%)
Strand = Plus / Plus
Query: 191 aggaggtcggcatggggaggggacgcgtcgagctgaagcggatcgagaacaagatcaacc 250
||||| ||| ||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 34 aggagatcgtcatggggaggggacgagttgagctgaagcggatcgagaacaagatcaacc 93
Query: 251 gccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccg 310
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 94 gccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccg 153
Query: 311 tgctctgcgacgccgaggtcgcgctcatcatcttctccggccgcggcaagctctacgagt 370
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 154 tgctctgcgacgccgaggtcgcgctcatcatcttctccagccgcggcaagctctacgagt 213
Query: 371 tcggcagcgccggcgtaactaaaactttagaaaggtatcaacattgctgctacaatgctc 430
|||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 214 tcggcagcgccggcataactaaaacactagaaaggtatcaacattgctgctacaacgctc 273
Query: 431 aagattccaacaatagtgcactctctgaatctcagagctggtaccaggaaatgtcaaaac 490
||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 274 aagattc---caatggtgcactctctgaaactcagagctggtaccaggaaatgtcaaaac 330
Query: 491 tgagggcaaaattcgaggccttgcagcgcactcagaggcacttgcttggcgaggaccttg 550
||||||||||||| || ||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 331 tgagggcaaaatttgaagccttgcagcgcactcagaggcacttgctcggggaggaccttg 390
Query: 551 ggccactgagtgt 563
| |||||||||||
Sbjct: 391 gcccactgagtgt 403
>gb|CW034003.1|CW034003 104_263_10502289_114_30359 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502289, DNA
sequence
Length = 697
Score = 285 bits (144), Expect = 5e-075
Identities = 165/172 (95%)
Strand = Plus / Minus
Query: 201 catggggaggggacgcgtcgagctgaagcggatcgagaacaagatcaaccgccaggtcac 260
|||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 452 catggggagggggcgggtcgagctcaagcggatcgagaacaagatcaaccgccaggtcac 393
Query: 261 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 320
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 392 cttcgccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcga 333
Query: 321 cgccgaggtcgcgctcatcatcttctccggccgcggcaagctctacgagttc 372
|||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 332 cgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttc 281
>gb|CW034004.1|CW034004 104_263_10502289_115_30360 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502289, DNA
sequence
Length = 716
Score = 285 bits (144), Expect = 5e-075
Identities = 165/172 (95%)
Strand = Plus / Plus
Query: 201 catggggaggggacgcgtcgagctgaagcggatcgagaacaagatcaaccgccaggtcac 260
|||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 465 catggggagggggcgggtcgagctcaagcggatcgagaacaagatcaaccgccaggtcac 524
Query: 261 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 320
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 525 cttcgccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcga 584
Query: 321 cgccgaggtcgcgctcatcatcttctccggccgcggcaagctctacgagttc 372
|||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 585 cgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttc 636
>gb|CW365810.1|CW365810 fsbb001f038i06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f038i06, DNA
sequence
Length = 725
Score = 285 bits (144), Expect = 5e-075
Identities = 165/172 (95%)
Strand = Plus / Minus
Query: 201 catggggaggggacgcgtcgagctgaagcggatcgagaacaagatcaaccgccaggtcac 260
|||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 705 catggggagggggcgggtcgagctcaagcggatcgagaacaagatcaaccgccaggtcac 646
Query: 261 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 320
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 645 cttcgccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcga 586
Query: 321 cgccgaggtcgcgctcatcatcttctccggccgcggcaagctctacgagttc 372
|||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 585 cgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttc 534
>gb|BE918053.1|BE918053 OV1_1_C11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 561
Score = 285 bits (144), Expect = 5e-075
Identities = 165/172 (95%)
Strand = Plus / Plus
Query: 201 catggggaggggacgcgtcgagctgaagcggatcgagaacaagatcaaccgccaggtcac 260
|||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 42 catggggagggggcgggtcgagctcaagcggatcgagaacaagatcaaccgccaggtcac 101
Query: 261 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 320
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 102 cttcgccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcga 161
Query: 321 cgccgaggtcgcgctcatcatcttctccggccgcggcaagctctacgagttc 372
|||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 162 cgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttc 213
>gb|BG054385.1|BG054385 OV2_3_G06.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 377
Score = 285 bits (144), Expect = 5e-075
Identities = 165/172 (95%)
Strand = Plus / Plus
Query: 201 catggggaggggacgcgtcgagctgaagcggatcgagaacaagatcaaccgccaggtcac 260
|||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 162 catggggagggggcgggtcgagctcaagcggatcgagaacaagatcaaccgccaggtcac 221
Query: 261 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 320
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 222 cttcgccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcga 281
Query: 321 cgccgaggtcgcgctcatcatcttctccggccgcggcaagctctacgagttc 372
|||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 282 cgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttc 333
>gb|BG357222.1|BG357222 OV2_11_C11.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 538
Score = 285 bits (144), Expect = 5e-075
Identities = 165/172 (95%)
Strand = Plus / Plus
Query: 201 catggggaggggacgcgtcgagctgaagcggatcgagaacaagatcaaccgccaggtcac 260
|||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 158 catggggagggggcgggtcgagctcaagcggatcgagaacaagatcaaccgccaggtcac 217
Query: 261 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 320
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 218 cttcgccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcga 277
Query: 321 cgccgaggtcgcgctcatcatcttctccggccgcggcaagctctacgagttc 372
|||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 278 cgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttc 329
>gb|CW081771.1|CW081771 104_422_10942807_114_32316_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10942807, DNA
sequence
Length = 682
Score = 283 bits (143), Expect = 2e-074
Identities = 170/179 (94%)
Strand = Plus / Minus
Query: 201 catggggaggggacgcgtcgagctgaagcggatcgagaacaagatcaaccgccaggtcac 260
|||||||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 catggggagggggcgggttgagctgaagcggatcgagaacaagatcaaccgccaggtcac 493
Query: 261 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 320
|||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 492 cttcgccaagcgccgcaacgggctgctcaagaaggcgtacgagctctccgtgctctgcga 433
Query: 321 cgccgaggtcgcgctcatcatcttctccggccgcggcaagctctacgagttcggcagcg 379
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 432 cgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttctgcagcg 374
>gb|CW081772.1|CW081772 104_422_10942807_114_32345_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10942807, DNA
sequence
Length = 712
Score = 283 bits (143), Expect = 2e-074
Identities = 170/179 (94%)
Strand = Plus / Minus
Query: 201 catggggaggggacgcgtcgagctgaagcggatcgagaacaagatcaaccgccaggtcac 260
|||||||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 catggggagggggcgggttgagctgaagcggatcgagaacaagatcaaccgccaggtcac 493
Query: 261 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 320
|||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 492 cttcgccaagcgccgcaacgggctgctcaagaaggcgtacgagctctccgtgctctgcga 433
Query: 321 cgccgaggtcgcgctcatcatcttctccggccgcggcaagctctacgagttcggcagcg 379
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 432 cgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttctgcagcg 374
>gb|CW344565.1|CW344565 104_847_11488020_148_36203_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488020, DNA
sequence
Length = 575
Score = 283 bits (143), Expect = 2e-074
Identities = 170/179 (94%)
Strand = Plus / Minus
Query: 201 catggggaggggacgcgtcgagctgaagcggatcgagaacaagatcaaccgccaggtcac 260
|||||||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 catggggagggggcgggttgagctgaagcggatcgagaacaagatcaaccgccaggtcac 124
Query: 261 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 320
|||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 123 cttcgccaagcgccgcaacgggctgctcaagaaggcgtacgagctctccgtgctctgcga 64
Query: 321 cgccgaggtcgcgctcatcatcttctccggccgcggcaagctctacgagttcggcagcg 379
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 63 cgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttctgcagcg 5
>gb|BG948060.1|BG948060 IP1_8_H04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 440
Score = 283 bits (143), Expect = 2e-074
Identities = 170/179 (94%)
Strand = Plus / Plus
Query: 201 catggggaggggacgcgtcgagctgaagcggatcgagaacaagatcaaccgccaggtcac 260
|||||||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 catggggagggggcgggttgagctgaagcggatcgagaacaagatcaaccgccaggtcac 244
Query: 261 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 320
|||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 245 cttcgccaagcgccgcaacgggctgctcaagaaggcgtacgagctctccgtgctctgcga 304
Query: 321 cgccgaggtcgcgctcatcatcttctccggccgcggcaagctctacgagttcggcagcg 379
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 305 cgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttctgcagcg 363
>gb|BI098309.1|BI098309 IP1_30_G10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 509
Score = 283 bits (143), Expect = 2e-074
Identities = 170/179 (94%)
Strand = Plus / Plus
Query: 201 catggggaggggacgcgtcgagctgaagcggatcgagaacaagatcaaccgccaggtcac 260
|||||||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 catggggagggggcgggttgagctgaagcggatcgagaacaagatcaaccgccaggtcac 241
Query: 261 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 320
|||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 242 cttcgccaagcgccgcaacgggctgctcaagaaggcgtacgagctctccgtgctctgcga 301
Query: 321 cgccgaggtcgcgctcatcatcttctccggccgcggcaagctctacgagttcggcagcg 379
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 302 cgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttctgcagcg 360
>gb|U49734.1|SBU49734 Sorghum bicolor MADS box transcription factor SbMADS1 mRNA,
complete cds
Length = 1055
Score = 283 bits (143), Expect = 2e-074
Identities = 170/179 (94%)
Strand = Plus / Plus
Query: 201 catggggaggggacgcgtcgagctgaagcggatcgagaacaagatcaaccgccaggtcac 260
|||||||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 catggggagggggcgggttgagctgaagcggatcgagaacaagatcaaccgccaggtcac 104
Query: 261 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 320
|||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 105 cttcgccaagcgccgcaacgggctgctcaagaaggcgtacgagctctccgtgctctgcga 164
Query: 321 cgccgaggtcgcgctcatcatcttctccggccgcggcaagctctacgagttcggcagcg 379
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 165 cgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttctgcagcg 223
>gb|BE918762.1|BE918762 OV1_4_F11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 548
Score = 278 bits (140), Expect = 1e-072
Identities = 164/172 (95%)
Strand = Plus / Plus
Query: 201 catggggaggggacgcgtcgagctgaagcggatcgagaacaagatcaaccgccaggtcac 260
|||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 42 catggggagggggcgggtcgagctcaagcggatcgagaacaagatcaaccgccaggtcac 101
Query: 261 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 320
|||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 102 cttcgccaagcgccgcaacggcctgctcaagaaagcgtacgagctctccgtgctctgcga 161
Query: 321 cgccgaggtcgcgctcatcatcttctccggccgcggcaagctctacgagttc 372
|||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 162 cgccgaggtcgcgctcatcatcttctccaaccgcggcaagctctacgagttc 213
>gb|CW293027.1|CW293027 104_773_11414425_148_35591_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11414425, DNA
sequence
Length = 404
Score = 224 bits (113), Expect = 2e-056
Identities = 173/193 (89%)
Strand = Plus / Minus
Query: 191 aggaggtcggcatggggaggggacgcgtcgagctgaagcggatcgagaacaagatcaacc 250
||||| ||| ||||||||||||||| || ||| |||||||||||||||||||||||| |
Sbjct: 266 aggagatcgtcatggggaggggacgagttgaggtgaagcggatcgagaacaagatcaggc 207
Query: 251 gccaggtcaccttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccg 310
| |||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||
Sbjct: 206 ggcaggtcacgttctccaagggccgcaacggcatgctcaagaaggcgtacgagctctccg 147
Query: 311 tgctctgcgacgccgaggtcgcgctcatcatcttctccggccgcggcaagctctacgagt 370
|| | |||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 146 gagtcggggacgccgaggtcgcgctcatcatcttctccagccgcggcaagctgtacgagg 87
Query: 371 tcggcagcgccgg 383
|||||||||||||
Sbjct: 86 tcggcagcgccgg 74
>gb|CW380917.1|CW380917 fsbb001f062a07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f062a07, DNA
sequence
Length = 270
Score = 220 bits (111), Expect = 2e-055
Identities = 162/179 (90%)
Strand = Plus / Minus
Query: 202 atggggaggggacgcgtcgagctgaagcggatcgagaacaagatcaaccgccaggtcacc 261
||||||||||| | || |||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 237 atggggaggggcagggtggagctgaaacggatcgagaacaagatcaaccgccaggtgacc 178
Query: 262 ttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgac 321
|| |||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||| |
Sbjct: 177 ttgtccaagcgtcgcaatggcctcctcaagaaggcctacgagctctccgttctctgcggc 118
Query: 322 gccgaggtcgcgctcatcatcttctccggccgcggcaagctctacgagttcggcagcgc 380
|||||||| ||||||||| |||||||| |||| ||||||||||||||||| ||||||||
Sbjct: 117 gccgaggtggcgctcatcgtcttctccagccgtggcaagctctacgagttaggcagcgc 59
>gb|CW407708.1|CW407708 fsbb001f101e21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f101e21, DNA
sequence
Length = 732
Score = 218 bits (110), Expect = 1e-054
Identities = 116/118 (98%)
Strand = Plus / Minus
Query: 266 ccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccg 325
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 732 ccaagcgccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcgacgccg 673
Query: 326 aggtcgcgctcatcatcttctccggccgcggcaagctctacgagttcggcagcgccgg 383
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 672 aggtcgcgctcatcatcttctccagccgcggcaagctctacgagttcggcagcgccgg 615
>gb|CW332085.1|CW332085 104_829_11481239_148_36028_086 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481239, DNA
sequence
Length = 584
Score = 196 bits (99), Expect = 4e-048
Identities = 147/163 (90%)
Strand = Plus / Minus
Query: 220 gagctgaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaac 279
|||||||||||||| |||||| || | ||| ||||| |||||||||||||||||||||
Sbjct: 423 gagctgaagcggatagagaacgcgacgagccggcaggtgaccttctccaagcgccgcaac 364
Query: 280 ggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 339
|| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 363 gggctgctcaagaaggcctacgagctctccgtgctctgcgacgctgaggtcgggctcatc 304
Query: 340 atcttctccggccgcggcaagctctacgagttcggcagcgccg 382
|||||||| |||||||||||||||||||||| ||||||||
Sbjct: 303 gtcttctccccgcgcggcaagctctacgagttcgccagcgccg 261
>gb|CW405640.1|CW405640 fsbb001f098e17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f098e17, DNA
sequence
Length = 631
Score = 196 bits (99), Expect = 4e-048
Identities = 147/163 (90%)
Strand = Plus / Minus
Query: 220 gagctgaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaac 279
|||||||||||||| |||||| || | ||| ||||| |||||||||||||||||||||
Sbjct: 340 gagctgaagcggatagagaacgcgacgagccggcaggtgaccttctccaagcgccgcaac 281
Query: 280 ggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 339
|| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 280 gggctgctcaagaaggcctacgagctctccgtgctctgcgacgctgaggtcgggctcatc 221
Query: 340 atcttctccggccgcggcaagctctacgagttcggcagcgccg 382
|||||||| |||||||||||||||||||||| ||||||||
Sbjct: 220 gtcttctccccgcgcggcaagctctacgagttcgccagcgccg 178
>gb|BM324751.1|BM324751 PIC1_35_B11.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 421
Score = 196 bits (99), Expect = 4e-048
Identities = 147/163 (90%)
Strand = Plus / Plus
Query: 220 gagctgaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaac 279
|||||||||||||| |||||| || | ||| ||||| |||||||||||||||||||||
Sbjct: 181 gagctgaagcggatagagaacgcgacgagccggcaggtgaccttctccaagcgccgcaac 240
Query: 280 ggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 339
|| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 241 gggctgctcaagaaggcctacgagctctccgtgctctgcgacgctgaggtcgggctcatc 300
Query: 340 atcttctccggccgcggcaagctctacgagttcggcagcgccg 382
|||||||| |||||||||||||||||||||| ||||||||
Sbjct: 301 gtcttctccccgcgcggcaagctctacgagttcgccagcgccg 343
>gb|CD429087.1|CD429087 ETH1_2_E10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_2_E10_A002 5', mRNA sequence
Length = 447
Score = 196 bits (99), Expect = 4e-048
Identities = 147/163 (90%)
Strand = Plus / Plus
Query: 220 gagctgaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaac 279
|||||||||||||| |||||| || | ||| ||||| |||||||||||||||||||||
Sbjct: 218 gagctgaagcggatagagaacgcgacgagccggcaggtgaccttctccaagcgccgcaac 277
Query: 280 ggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 339
|| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 278 gggctgctcaagaaggcctacgagctctccgtgctctgcgacgctgaggtcgggctcatc 337
Query: 340 atcttctccggccgcggcaagctctacgagttcggcagcgccg 382
|||||||| |||||||||||||||||||||| ||||||||
Sbjct: 338 gtcttctccccgcgcggcaagctctacgagttcgccagcgccg 380
>gb|CW210331.1|CW210331 104_640_11189738_116_37000_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11189738, DNA
sequence
Length = 640
Score = 194 bits (98), Expect = 1e-047
Identities = 116/122 (95%)
Strand = Plus / Minus
Query: 201 catggggaggggacgcgtcgagctgaagcggatcgagaacaagatcaaccgccaggtcac 260
|||||||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 catggggagggggcgggttgagctgaagcggatcgagaacaagatcaaccgccaggtcac 63
Query: 261 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 320
|||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 62 cttcgccaagcgccgcaacgggctgctcaagaaggcgtacgagctctccgtgctctgcga 3
Query: 321 cg 322
||
Sbjct: 2 cg 1
>gb|BF657151.1|BF657151 OV2_21_D05.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 301
Score = 190 bits (96), Expect = 2e-046
Identities = 114/120 (95%)
Strand = Plus / Plus
Query: 201 catggggaggggacgcgtcgagctgaagcggatcgagaacaagatcaaccgccaggtcac 260
|||||||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 catggggagggggcgggttgagctgaagcggatcgagaacaagatcaaccgccaggtcac 241
Query: 261 cttctccaagcgccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcga 320
|||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 242 cttcgccaagcgccgcaacgggctgctcaagaaggcgtacgagctctccgtgctctgcga 301
>gb|CW461504.1|CW461504 fsbb001f209d06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f209d06, DNA
sequence
Length = 779
Score = 178 bits (90), Expect = 8e-043
Identities = 126/138 (91%)
Strand = Plus / Minus
Query: 220 gagctgaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaac 279
|||||||||||||||||||||||||||| ||| ||||| || ||| |||||||||| |||
Sbjct: 486 gagctgaagcggatcgagaacaagatcagccggcaggtgacgttcgccaagcgccggaac 427
Query: 280 ggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 339
|| |||||||||||||| |||||||| || ||||||||||||||||||||||| ||||||
Sbjct: 426 gggctgctcaagaaggcgtacgagctgtcggtgctctgcgacgccgaggtcgccctcatc 367
Query: 340 atcttctccggccgcggc 357
||||||||| ||||||||
Sbjct: 366 atcttctccagccgcggc 349
>gb|CW481370.1|CW481370 fsbb001f240o12f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f240o12, DNA
sequence
Length = 722
Score = 178 bits (90), Expect = 8e-043
Identities = 135/150 (90%)
Strand = Plus / Minus
Query: 221 agctgaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacg 280
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 326 agctgaagcggatcgagaacaagatcaaccgccaggtgaccttctccaagcgccgctcgg 267
Query: 281 gcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatca 340
| |||||||||||||| ||||| |||||||||||||||| |||||||||||||| ||||
Sbjct: 266 ggctgctcaagaaggcgcacgagatctccgtgctctgcgatgccgaggtcgcgcttatca 207
Query: 341 tcttctccggccgcggcaagctctacgagt 370
|||||||| | ||||||||||||||||
Sbjct: 206 tcttctccaccaagggcaagctctacgagt 177
>gb|BG357245.1|BG357245 OV2_11_F01.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 435
Score = 178 bits (90), Expect = 8e-043
Identities = 126/138 (91%)
Strand = Plus / Plus
Query: 220 gagctgaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaac 279
|||||||||||||||||||||||||||| ||| ||||| || ||| |||||||||| |||
Sbjct: 82 gagctgaagcggatcgagaacaagatcagccggcaggtgacgttcgccaagcgccggaac 141
Query: 280 ggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatc 339
|| |||||||||||||| |||||||| || |||| ||||||||||||||||||||||||
Sbjct: 142 gggctgctcaagaaggcgtacgagctgtcgctgctgtgcgacgccgaggtcgcgctcatc 201
Query: 340 atcttctccggccgcggc 357
||||||||||||||||||
Sbjct: 202 atcttctccggccgcggc 219
>gb|CW214921.1|CW214921 104_647_11194268_116_37464_080 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194268, DNA
sequence
Length = 674
Score = 176 bits (89), Expect = 3e-042
Identities = 98/101 (97%)
Strand = Plus / Plus
Query: 272 gccgcaacggcctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcg 331
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 gccgcaacggcctgctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcg 60
Query: 332 cgctcatcatcttctccggccgcggcaagctctacgagttc 372
||||||||||||||||| ||||||||||||||||||||||
Sbjct: 61 cgctcatcatcttctccaaccgcggcaagctctacgagttc 101
>gb|CW255743.1|CW255743 104_720_11226403_116_35130_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11226403, DNA
sequence
Length = 572
Score = 176 bits (89), Expect = 3e-042
Identities = 131/145 (90%)
Strand = Plus / Plus
Query: 226 aagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctg 285
||||| |||||||||| || |||| | ||||| ||||||| ||||||||||||||||||
Sbjct: 129 aagcgcatcgagaacacgaccaacaggcaggtgaccttctgcaagcgccgcaacggcctc 188
Query: 286 ctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 345
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 189 ctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttc 248
Query: 346 tccggccgcggcaagctctacgagt 370
||| |||||||| ||||||||||
Sbjct: 249 tccagccgcggccgcctctacgagt 273
>gb|AW745210.1|AW745210 LG1_387_D10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 575
Score = 176 bits (89), Expect = 3e-042
Identities = 131/145 (90%)
Strand = Plus / Plus
Query: 226 aagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctg 285
||||| |||||||||| || |||| | ||||| ||||||| ||||||||||||||||||
Sbjct: 312 aagcgcatcgagaacacgaccaacaggcaggtgaccttctgcaagcgccgcaacggcctc 371
Query: 286 ctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 345
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 372 ctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttc 431
Query: 346 tccggccgcggcaagctctacgagt 370
||| |||||||| ||||||||||
Sbjct: 432 tccagccgcggccgcctctacgagt 456
>gb|BG357712.1|BG357712 OV2_29_D08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 569
Score = 176 bits (89), Expect = 3e-042
Identities = 131/145 (90%)
Strand = Plus / Plus
Query: 226 aagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctg 285
||||| |||||||||| || |||| | ||||| ||||||| ||||||||||||||||||
Sbjct: 309 aagcgcatcgagaacacgaccaacaggcaggtgaccttctgcaagcgccgcaacggcctc 368
Query: 286 ctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 345
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 369 ctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttc 428
Query: 346 tccggccgcggcaagctctacgagt 370
||| |||||||| ||||||||||
Sbjct: 429 tccagccgcggccgcctctacgagt 453
>gb|BG357882.1|BG357882 OV2_31_D08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 540
Score = 176 bits (89), Expect = 3e-042
Identities = 131/145 (90%)
Strand = Plus / Plus
Query: 226 aagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctg 285
||||| |||||||||| || |||| | ||||| ||||||| ||||||||||||||||||
Sbjct: 309 aagcgcatcgagaacacgaccaacaggcaggtgaccttctgcaagcgccgcaacggcctc 368
Query: 286 ctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 345
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 369 ctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttc 428
Query: 346 tccggccgcggcaagctctacgagt 370
||| |||||||| ||||||||||
Sbjct: 429 tccagccgcggccgcctctacgagt 453
>gb|BG649748.1|BG649748 RHIZ2_83_B06.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 535
Score = 176 bits (89), Expect = 3e-042
Identities = 131/145 (90%)
Strand = Plus / Plus
Query: 226 aagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctg 285
||||| |||||||||| || |||| | ||||| ||||||| ||||||||||||||||||
Sbjct: 314 aagcgcatcgagaacacgaccaacaggcaggtgaccttctgcaagcgccgcaacggcctc 373
Query: 286 ctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 345
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 374 ctcaagaaggcgtacgagctctccgtgctctgcgacgccgaggtcgcgctcatcgtcttc 433
Query: 346 tccggccgcggcaagctctacgagt 370
||| |||||||| ||||||||||
Sbjct: 434 tccagccgcggccgcctctacgagt 458
>gb|CW171069.1|CW171069 104_581_11155545_116_36517_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11155545, DNA
sequence
Length = 655
Score = 174 bits (88), Expect = 1e-041
Identities = 139/156 (89%)
Strand = Plus / Minus
Query: 224 tgaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcc 283
|||||||||| |||||| || || |||||||||||||||||||||||||||||||||||
Sbjct: 621 tgaagcggatagagaacgcgaccagccgccaggtcaccttctccaagcgccgcaacggcc 562
Query: 284 tgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatct 343
||||||||||||| | |||||||||||| |||||||||||||||||||||||| || |||
Sbjct: 561 tgctcaagaaggcgttcgagctctccgtcctctgcgacgccgaggtcgcgctcgtcgtct 502
Query: 344 tctccggccgcggcaagctctacgagttcggcagcg 379
|||| ||||||||||||| ||| |||| |||||
Sbjct: 501 tctctccgcgcggcaagctcttcgaattcgccagcg 466
>gb|CW280818.1|CW280818 104_756_11407834_116_35450_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11407834, DNA
sequence
Length = 575
Score = 172 bits (87), Expect = 5e-041
Identities = 117/127 (92%)
Strand = Plus / Minus
Query: 222 gctgaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacgg 281
|||| ||||||||||||||||||||| ||| ||||| |||||| |||||||||| |||||
Sbjct: 255 gctgcagcggatcgagaacaagatcagccggcaggtgaccttcgccaagcgccggaacgg 196
Query: 282 cctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcat 341
|||||||||||||||||||||||||||| | |||||||||||||||||||||||| || |
Sbjct: 195 cctgctcaagaaggcctacgagctctccatcctctgcgacgccgaggtcgcgctcgtcct 136
Query: 342 cttctcc 348
|||||||
Sbjct: 135 cttctcc 129
>gb|CW296811.1|CW296811 104_778_11461713_116_35630_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11461713, DNA
sequence
Length = 684
Score = 172 bits (87), Expect = 5e-041
Identities = 117/127 (92%)
Strand = Plus / Plus
Query: 222 gctgaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacgg 281
|||| ||||||||||||||||||||| ||| ||||| |||||| |||||||||| |||||
Sbjct: 186 gctgcagcggatcgagaacaagatcagccggcaggtgaccttcgccaagcgccggaacgg 245
Query: 282 cctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcat 341
|||||||||||||||||||||||||||| | |||||||||||||||||||||||| || |
Sbjct: 246 cctgctcaagaaggcctacgagctctccatcctctgcgacgccgaggtcgcgctcgtcct 305
Query: 342 cttctcc 348
|||||||
Sbjct: 306 cttctcc 312
>gb|AY188330.1| Sorghum bicolor phytochelatin synthetase-like protein 1, phytochelatin
synthetase-like protein 2, and cytochrome b5 (Cyb5) genes,
complete cds; and MADS box protein AGLG1 (Aglg1) gene,
partial cds
Length = 23102
Score = 172 bits (87), Expect = 5e-041
Identities = 117/127 (92%)
Strand = Plus / Plus
Query: 222 gctgaagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacgg 281
|||| ||||||||||||||||||||| ||| ||||| |||||| |||||||||| |||||
Sbjct: 21627 gctgcagcggatcgagaacaagatcagccggcaggtgaccttcgccaagcgccggaacgg 21686
Query: 282 cctgctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcat 341
|||||||||||||||||||||||||||| | |||||||||||||||||||||||| || |
Sbjct: 21687 cctgctcaagaaggcctacgagctctccatcctctgcgacgccgaggtcgcgctcgtcct 21746
Query: 342 cttctcc 348
|||||||
Sbjct: 21747 cttctcc 21753
>gb|CW181349.1|CW181349 104_596_11163460_116_36650_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11163460, DNA
sequence
Length = 736
Score = 170 bits (86), Expect = 2e-040
Identities = 98/102 (96%)
Strand = Plus / Plus
Query: 526 aggcacttgcttggcgaggaccttgggccactgagtgtgaaggaattgcagcagctagag 585
||||||||||| || ||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 28 aggcacttgctcggggaggaccttggcccactgagtgttaaggaattgcagcagctagag 87
Query: 586 aaacagctagaatgtgctttgtcacaggcaagacagagaaag 627
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 aaacagctagaatgtgctttgtcacaggcaagacagagaaag 129
>gb|CW184444.1|CW184444 104_600_11165153_148_36682_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11165153, DNA
sequence
Length = 679
Score = 170 bits (86), Expect = 2e-040
Identities = 98/102 (96%)
Strand = Plus / Plus
Query: 526 aggcacttgcttggcgaggaccttgggccactgagtgtgaaggaattgcagcagctagag 585
||||||||||| || ||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 121 aggcacttgctcggggaggaccttggcccactgagtgttaaggaattgcagcagctagag 180
Query: 586 aaacagctagaatgtgctttgtcacaggcaagacagagaaag 627
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaacagctagaatgtgctttgtcacaggcaagacagagaaag 222
>gb|CL166695.1|CL166695 104_362_10809549_114_31798_381 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809549, DNA
sequence
Length = 690
Score = 168 bits (85), Expect = 8e-040
Identities = 130/145 (89%)
Strand = Plus / Minus
Query: 226 aagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctg 285
||||| |||||||||| | ||||| ||||||||||||| ||||||||||||||||||
Sbjct: 592 aagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcctc 533
Query: 286 ctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 345
||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 532 ctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtcttc 473
Query: 346 tccggccgcggcaagctctacgagt 370
||| |||||||| ||||||||||
Sbjct: 472 tccagccgcggccgcctctacgagt 448
>gb|CW327830.1|CW327830 104_823_11478965_116_35975_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478965, DNA
sequence
Length = 605
Score = 168 bits (85), Expect = 8e-040
Identities = 130/145 (89%)
Strand = Plus / Plus
Query: 226 aagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctg 285
||||| |||||||||| | ||||| ||||||||||||| ||||||||||||||||||
Sbjct: 372 aagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcctc 431
Query: 286 ctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 345
||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 432 ctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtcttc 491
Query: 346 tccggccgcggcaagctctacgagt 370
||| |||||||| ||||||||||
Sbjct: 492 tccagccgcggccgcctctacgagt 516
>gb|CW327831.1|CW327831 104_823_11478965_148_35976_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478965, DNA
sequence
Length = 620
Score = 168 bits (85), Expect = 8e-040
Identities = 130/145 (89%)
Strand = Plus / Minus
Query: 226 aagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctg 285
||||| |||||||||| | ||||| ||||||||||||| ||||||||||||||||||
Sbjct: 302 aagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcctc 243
Query: 286 ctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 345
||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 242 ctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtcttc 183
Query: 346 tccggccgcggcaagctctacgagt 370
||| |||||||| ||||||||||
Sbjct: 182 tccagccgcggccgcctctacgagt 158
>gb|CW486759.1|CW486759 fsbb001f252d14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f252d14, DNA
sequence
Length = 611
Score = 168 bits (85), Expect = 8e-040
Identities = 130/145 (89%)
Strand = Plus / Minus
Query: 226 aagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctg 285
||||| |||||||||| | ||||| ||||||||||||| ||||||||||||||||||
Sbjct: 445 aagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcctc 386
Query: 286 ctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 345
||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 385 ctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtcttc 326
Query: 346 tccggccgcggcaagctctacgagt 370
||| |||||||| ||||||||||
Sbjct: 325 tccagccgcggccgcctctacgagt 301
>gb|CW486760.1|CW486760 fsbb001f252d14k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f252d14, DNA
sequence
Length = 654
Score = 168 bits (85), Expect = 8e-040
Identities = 130/145 (89%)
Strand = Plus / Plus
Query: 226 aagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctg 285
||||| |||||||||| | ||||| ||||||||||||| ||||||||||||||||||
Sbjct: 356 aagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcctc 415
Query: 286 ctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 345
||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 416 ctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtcttc 475
Query: 346 tccggccgcggcaagctctacgagt 370
||| |||||||| ||||||||||
Sbjct: 476 tccagccgcggccgcctctacgagt 500
>gb|BE918857.1|BE918857 FM1_1_A12.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 530
Score = 168 bits (85), Expect = 8e-040
Identities = 130/145 (89%)
Strand = Plus / Plus
Query: 226 aagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctg 285
||||| |||||||||| | ||||| ||||||||||||| ||||||||||||||||||
Sbjct: 151 aagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcctc 210
Query: 286 ctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 345
||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 211 ctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtcttc 270
Query: 346 tccggccgcggcaagctctacgagt 370
||| |||||||| ||||||||||
Sbjct: 271 tccagccgcggccgcctctacgagt 295
>gb|BE918862.1|BE918862 FM1_1_B06.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 515
Score = 168 bits (85), Expect = 8e-040
Identities = 130/145 (89%)
Strand = Plus / Plus
Query: 226 aagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctg 285
||||| |||||||||| | ||||| ||||||||||||| ||||||||||||||||||
Sbjct: 151 aagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcctc 210
Query: 286 ctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 345
||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 211 ctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtcttc 270
Query: 346 tccggccgcggcaagctctacgagt 370
||| |||||||| ||||||||||
Sbjct: 271 tccagccgcggccgcctctacgagt 295
>gb|BF317935.1|BF317935 OV1_9_F09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 551
Score = 168 bits (85), Expect = 8e-040
Identities = 130/145 (89%)
Strand = Plus / Plus
Query: 226 aagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctg 285
||||| |||||||||| | ||||| ||||||||||||| ||||||||||||||||||
Sbjct: 249 aagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcctc 308
Query: 286 ctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 345
||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 309 ctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtcttc 368
Query: 346 tccggccgcggcaagctctacgagt 370
||| |||||||| ||||||||||
Sbjct: 369 tccagccgcggccgcctctacgagt 393
>gb|BF657168.1|BF657168 OV2_21_E10.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 474
Score = 168 bits (85), Expect = 8e-040
Identities = 130/145 (89%)
Strand = Plus / Plus
Query: 226 aagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctg 285
||||| |||||||||| | ||||| ||||||||||||| ||||||||||||||||||
Sbjct: 93 aagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcctc 152
Query: 286 ctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 345
||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 153 ctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtcttc 212
Query: 346 tccggccgcggcaagctctacgagt 370
||| |||||||| ||||||||||
Sbjct: 213 tccagccgcggccgcctctacgagt 237
>gb|BF657564.1|BF657564 OV2_23_G05.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 434
Score = 168 bits (85), Expect = 8e-040
Identities = 130/145 (89%)
Strand = Plus / Plus
Query: 226 aagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctg 285
||||| |||||||||| | ||||| ||||||||||||| ||||||||||||||||||
Sbjct: 187 aagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcctc 246
Query: 286 ctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 345
||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 247 ctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtcttc 306
Query: 346 tccggccgcggcaagctctacgagt 370
||| |||||||| ||||||||||
Sbjct: 307 tccagccgcggccgcctctacgagt 331
>gb|BF657695.1|BF657695 OV2_20_F03.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 508
Score = 168 bits (85), Expect = 8e-040
Identities = 130/145 (89%)
Strand = Plus / Plus
Query: 226 aagcggatcgagaacaagatcaaccgccaggtcaccttctccaagcgccgcaacggcctg 285
||||| |||||||||| | ||||| ||||||||||||| ||||||||||||||||||
Sbjct: 177 aagcgcatcgagaacaccacgaaccggcaggtcaccttctgcaagcgccgcaacggcctc 236
Query: 286 ctcaagaaggcctacgagctctccgtgctctgcgacgccgaggtcgcgctcatcatcttc 345
||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 237 ctcaagaaggcgtacgagctctcggtgctctgcgacgccgaggtcgcgctcatcgtcttc 296
Query: 346 tccggccgcggcaagctctacgagt 370
||| |||||||| ||||||||||
Sbjct: 297 tccagccgcggccgcctctacgagt 321
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 367,018
Number of Sequences: 832831
Number of extensions: 367018
Number of successful extensions: 101236
Number of sequences better than 0.5: 266
Number of HSP's better than 0.5 without gapping: 264
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 100872
Number of HSP's gapped (non-prelim): 341
length of query: 1263
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1243
effective length of database: 474,703,049
effective search space: 590055889907
effective search space used: 590055889907
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)