BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AF332176.2.1
(912 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW321934.1|CW321934 104_815_11475820_116_35944_008 Sorgh... 696 0.0
gb|CW247381.1|CW247381 104_708_11221754_116_36078_009 Sorgh... 579 e-163
gb|CL159722.1|CL159722 104_349_10804467_116_31382_291 Sorgh... 575 e-162
gb|BZ367428.1|BZ367428 id04d05.g1 WGS-SbicolorF (JM107 adap... 490 e-136
gb|CW154770.1|CW154770 104_557_11145777_148_36360_047 Sorgh... 422 e-116
gb|CW247382.1|CW247382 104_708_11221754_148_36079_009 Sorgh... 325 4e-087
gb|CW020721.1|CW020721 104_109_10409131_114_30493 Sorghum m... 309 2e-082
gb|CW229431.1|CW229431 104_670_11207297_116_37255_067 Sorgh... 232 5e-059
gb|CN146331.1|CN146331 WOUND1_39_D02.g1_A002 Wounded leaves... 212 4e-053
gb|CN126677.1|CN126677 RHOH1_18_C01.g1_A002 Acid- and alkal... 196 3e-048
gb|CN129456.1|CN129456 RHOH1_35_B11.g1_A002 Acid- and alkal... 196 3e-048
gb|CN131258.1|CN131258 RHOH1_46_G08.g1_A002 Acid- and alkal... 196 3e-048
gb|CN150200.1|CN150200 WOUND1_67_D03.g1_A002 Wounded leaves... 196 3e-048
gb|CX606202.1|CX606202 ANR1_1_E07.g1_A002 Anaerobic roots S... 196 3e-048
gb|CX609949.1|CX609949 ANR1_15_F01.g1_A002 Anaerobic roots ... 196 3e-048
gb|CN141913.1|CN141913 WOUND1_2_E01.g1_A002 Wounded leaves ... 190 2e-046
gb|CN144039.1|CN144039 WOUND1_19_G06.g1_A002 Wounded leaves... 190 2e-046
gb|CX610446.1|CX610446 ANR1_18_F11.g1_A002 Anaerobic roots ... 188 6e-046
gb|BM323374.1|BM323374 PIC1_18_E10.b1_A002 Pathogen-infecte... 180 1e-043
gb|CN127679.1|CN127679 RHOH1_24_A06.g3_A002 Acid- and alkal... 180 1e-043
gb|CN129996.1|CN129996 RHOH1_38_E01.g1_A002 Acid- and alkal... 180 1e-043
gb|CX616412.1|CX616412 GABR1_27_F04.g1_A002 GA- or brassino... 180 1e-043
gb|BI245881.1|BI245881 IP1_64_F11.b1_A002 Immature pannicle... 178 6e-043
gb|BQ479087.1|BQ479087 pRC-1199 pRC Sorghum halepense cDNA ... 174 9e-042
gb|CD463948.1|CD463948 ETH1_47_B11.g1_A002 Ethylene-treated... 174 9e-042
gb|DN551914.1|DN551914 pSPR-RT-MR-H2_C06_C282 pSPR Sorghum ... 174 9e-042
gb|CN130196.1|CN130196 RHOH1_39_H10.g1_A002 Acid- and alkal... 172 4e-041
gb|BI139874.1|BI139874 IP1_46_G07.b1_A002 Immature pannicle... 170 1e-040
gb|CD221137.1|CD221137 CCC1_73_H10.g1_A007 Callus culture/c... 170 1e-040
gb|CD221711.1|CD221711 CCC1_70_E10.g1_A007 Callus culture/c... 170 1e-040
gb|CD223182.1|CD223182 CCC1_26_F12.g1_A007 Callus culture/c... 170 1e-040
gb|CD223670.1|CD223670 CCC1_29_B07.g1_A007 Callus culture/c... 170 1e-040
gb|CD225200.1|CD225200 CCC1_38_F05.g1_A007 Callus culture/c... 170 1e-040
gb|CD227137.1|CD227137 CCC1_4_D07.g1_A007 Callus culture/ce... 170 1e-040
gb|CN134577.1|CN134577 OX1_27_E09.b1_A002 Oxidatively-stres... 168 6e-040
gb|CN134664.1|CN134664 OX1_27_E09.g1_A002 Oxidatively-stres... 168 6e-040
gb|CD428079.1|CD428079 ETH1_32_E01.g1_A002 Ethylene-treated... 167 2e-039
gb|CN133353.1|CN133353 OX1_11_E08.g1_A002 Oxidatively-stres... 167 2e-039
gb|CN134421.1|CN134421 OX1_26_F05.b1_A002 Oxidatively-stres... 167 2e-039
gb|CX606182.1|CX606182 ANR1_1_C10.g1_A002 Anaerobic roots S... 167 2e-039
gb|CX616580.1|CX616580 GABR1_28_F03.g1_A002 GA- or brassino... 167 2e-039
gb|AW677546.1|AW677546 DG1_8_G07.b1_A002 Dark Grown 1 (DG1)... 165 9e-039
gb|CD223869.1|CD223869 CCC1_30_D11.g1_A007 Callus culture/c... 165 9e-039
gb|CD225188.1|CD225188 CCC1_38_A02.g1_A007 Callus culture/c... 165 9e-039
gb|CD227465.1|CD227465 CCC1_51_H01.g1_A007 Callus culture/c... 165 9e-039
gb|CD236070.1|CD236070 SS1_25_E11.g1_A012 Salt-stressed see... 165 9e-039
gb|CN136121.1|CN136121 OX1_40_H11.g1_A002 Oxidatively-stres... 165 9e-039
gb|CX614568.1|CX614568 GABR1_14_H01.g1_A002 GA- or brassino... 165 9e-039
gb|CX620407.1|CX620407 GABR1_51_E02.g1_A002 GA- or brassino... 165 9e-039
gb|CW061064.1|CW061064 104_304_10520199_114_30143 Sorghum m... 163 4e-038
gb|CW189107.1|CW189107 104_610_11173790_116_37100_059 Sorgh... 163 4e-038
gb|CW399257.1|CW399257 fsbb001f089a13f0 Sorghum methylation... 163 4e-038
gb|CD220835.1|CD220835 CCC1_69_G07.g1_A007 Callus culture/c... 163 4e-038
gb|CD223373.1|CD223373 CCC1_27_E07.g1_A007 Callus culture/c... 163 4e-038
gb|CD224343.1|CD224343 CCC1_33_D02.g1_A007 Callus culture/c... 163 4e-038
gb|CD229177.1|CD229177 CCC1_13_B09.g1_A007 Callus culture/c... 163 4e-038
gb|CN149549.1|CN149549 WOUND1_63_A11.g1_A002 Wounded leaves... 163 4e-038
gb|CX607460.1|CX607460 ANR1_8_G05.g1_A002 Anaerobic roots S... 163 4e-038
gb|BE362269.1|BE362269 DG1_85_A02.b1_A002 Dark Grown 1 (DG1... 161 1e-037
gb|BG559514.1|BG559514 RHIZ2_55_F12.b1_A003 Rhizome2 (RHIZ2... 161 1e-037
gb|CD222212.1|CD222212 CCC1_2_B01.g1_A007 Callus culture/ce... 161 1e-037
gb|CD228110.1|CD228110 CCC1_5_B06.g1_A007 Callus culture/ce... 161 1e-037
gb|CD229498.1|CD229498 CCC1_16_D06.g1_A007 Callus culture/c... 161 1e-037
gb|CD430094.1|CD430094 ETH1_13_H07.g1_A002 Ethylene-treated... 161 1e-037
gb|CF427585.1|CF427585 PH1_16_B04.g1_A002 Phosphorous-defic... 161 1e-037
gb|CN127599.1|CN127599 RHOH1_24_A06.b1_A002 Acid- and alkal... 161 1e-037
gb|CN140959.1|CN140959 OX1_48_A09.g1_A002 Oxidatively-stres... 161 1e-037
gb|CX610369.1|CX610369 ANR1_18_F11.b1_A002 Anaerobic roots ... 161 1e-037
gb|CW175269.1|CW175269 104_587_11157848_148_36568_020 Sorgh... 159 5e-037
gb|BI245810.1|BI245810 IP1_64_F11.g1_A002 Immature pannicle... 159 5e-037
gb|CN125015.1|CN125015 RHOH1_8_G11.b1_A002 Acid- and alkali... 159 5e-037
gb|CN134237.1|CN134237 OX1_25_D04.b1_A002 Oxidatively-stres... 159 5e-037
gb|CN134318.1|CN134318 OX1_25_D04.g1_A002 Oxidatively-stres... 159 5e-037
gb|CN134399.1|CN134399 OX1_26_D04.b1_A002 Oxidatively-stres... 159 5e-037
gb|CN134481.1|CN134481 OX1_26_D04.g1_A002 Oxidatively-stres... 159 5e-037
gb|CX609868.1|CX609868 ANR1_15_F01.b1_A002 Anaerobic roots ... 159 5e-037
gb|BG560106.1|BG560106 RHIZ2_69_D11.b1_A003 Rhizome2 (RHIZ2... 157 2e-036
gb|BG739602.1|BG739602 EM1_82_H04.b1_A002 Embryo 1 (EM1) So... 157 2e-036
gb|CD432249.1|CD432249 ETH1_26_B01.g1_A002 Ethylene-treated... 157 2e-036
gb|CN124076.1|CN124076 RHOH1_2_B05.g1_A002 Acid- and alkali... 157 2e-036
gb|CD223170.1|CD223170 CCC1_26_C06.g1_A007 Callus culture/c... 155 9e-036
gb|CF489807.1|CF489807 POL1_59_F02.g1_A002 Pollen Sorghum b... 155 9e-036
gb|CX620046.1|CX620046 GABR1_49_B08.g1_A002 GA- or brassino... 155 9e-036
gb|CD431281.1|CD431281 ETH1_7_B06.g1_A002 Ethylene-treated ... 153 3e-035
gb|CD219737.1|CD219737 CCC1_58_F06.g1_A007 Callus culture/c... 151 1e-034
gb|CD219794.1|CD219794 CCC1_58_F07.g1_A007 Callus culture/c... 151 1e-034
gb|BG240144.1|BG240144 OV1_18_D11.b1_A002 Ovary 1 (OV1) Sor... 149 5e-034
gb|CF427084.1|CF427084 PH1_3_D05.g1_A002 Phosphorous-defici... 149 5e-034
gb|CF429257.1|CF429257 PH1_20_E04.g1_A002 Phosphorous-defic... 149 5e-034
gb|BG047717.1|BG047717 OV1_26_H12.b1_A002 Ovary 1 (OV1) Sor... 145 8e-033
gb|CL177774.1|CL177774 104_385_10894067_116_31914_131 Sorgh... 143 3e-032
gb|CW267419.1|CW267419 104_737_11400724_148_35294_004 Sorgh... 143 3e-032
gb|CW437579.1|CW437579 fsbb001f154m08f0 Sorghum methylation... 143 3e-032
gb|BE360258.1|BE360258 DG1_62_E04.b1_A002 Dark Grown 1 (DG1... 137 2e-030
gb|CD227153.1|CD227153 CCC1_4_A10.g1_A007 Callus culture/ce... 137 2e-030
gb|CN126589.1|CN126589 RHOH1_18_C01.b1_A002 Acid- and alkal... 135 8e-030
gb|CN129415.1|CN129415 RHOH1_35_G04.b3_A002 Acid- and alkal... 135 8e-030
gb|CN131170.1|CN131170 RHOH1_46_G08.b1_A002 Acid- and alkal... 135 8e-030
gb|CW038651.1|CW038651 104_271_10505052_115_30388 Sorghum m... 133 3e-029
gb|CW123167.1|CW123167 104_502_11111067_148_34685_010 Sorgh... 133 3e-029
gb|CD430276.1|CD430276 ETH1_17_H06.g1_A002 Ethylene-treated... 133 3e-029
gb|CN135238.1|CN135238 OX1_31_B04.g1_A002 Oxidatively-stres... 133 3e-029
gb|BG102852.1|BG102852 RHIZ2_34_B12.b1_A003 Rhizome2 (RHIZ2... 129 5e-028
gb|BG556160.1|BG556160 EM1_68_E05.b1_A002 Embryo 1 (EM1) So... 129 5e-028
gb|BG558190.1|BG558190 RHIZ2_64_B11.b1_A003 Rhizome2 (RHIZ2... 129 5e-028
gb|BG559467.1|BG559467 RHIZ2_55_B12.b1_A003 Rhizome2 (RHIZ2... 129 5e-028
gb|CW067110.1|CW067110 104_314_10524068_114_30126 Sorghum m... 127 2e-027
gb|CW300424.1|CW300424 104_783_11463650_116_36248_001 Sorgh... 127 2e-027
gb|CW321645.1|CW321645 104_815_11475665_116_35947_077 Sorgh... 127 2e-027
gb|CW446822.1|CW446822 fsbb001f179k13k0 Sorghum methylation... 127 2e-027
gb|CW487412.1|CW487412 fsbb001f253e05f0 Sorghum methylation... 127 2e-027
gb|CD220954.1|CD220954 CCC1_72_B03.g1_A007 Callus culture/c... 127 2e-027
gb|CN129367.1|CN129367 RHOH1_35_B11.b3_A002 Acid- and alkal... 127 2e-027
gb|BG102529.1|BG102529 RHIZ2_34_B12.g1_A003 Rhizome2 (RHIZ2... 125 8e-027
gb|CW186182.1|CW186182 104_604_11166433_116_36705_013 Sorgh... 123 3e-026
gb|CW335482.1|CW335482 104_834_11483062_116_36083_089 Sorgh... 123 3e-026
gb|CW335483.1|CW335483 104_834_11483062_148_36104_089 Sorgh... 123 3e-026
gb|CW359786.1|CW359786 fsbb001f027j03k0 Sorghum methylation... 123 3e-026
gb|CD430578.1|CD430578 ETH1_19_F11.g1_A002 Ethylene-treated... 123 3e-026
gb|CN135165.1|CN135165 OX1_31_B04.b1_A002 Oxidatively-stres... 123 3e-026
gb|CX610279.1|CX610279 ANR1_17_E04.g1_A002 Anaerobic roots ... 123 3e-026
gb|CL155532.1|CL155532 104_341_10782207_114_31471_303 Sorgh... 119 5e-025
gb|CW051419.1|CW051419 104_291_10515236_114_30192 Sorghum m... 119 5e-025
gb|CW138756.1|CW138756 104_528_11134865_116_34888_069 Sorgh... 119 5e-025
gb|CW138757.1|CW138757 104_528_11134865_148_34892_069 Sorgh... 119 5e-025
gb|CW407265.1|CW407265 fsbb001f100k14k0 Sorghum methylation... 119 5e-025
gb|AW286877.2|AW286877 LG1_222_F02.b1_A002 Light Grown 1 (L... 119 5e-025
gb|AW287233.2|AW287233 LG1_268_C03.b1_A002 Light Grown 1 (L... 119 5e-025
gb|BE358945.1|BE358945 DG1_37_C09.b1_A002 Dark Grown 1 (DG1... 119 5e-025
gb|BE358978.1|BE358978 DG1_37_C09.g1_A002 Dark Grown 1 (DG1... 119 5e-025
gb|BE361499.1|BE361499 DG1_81_B09.b1_A002 Dark Grown 1 (DG1... 119 5e-025
gb|BF421147.1|BF421147 FM1_6_A06.b1_A003 Floral-Induced Mer... 119 5e-025
gb|CD223455.1|CD223455 CCC1_28_H10.b1_A007 Callus culture/c... 119 5e-025
gb|CD227549.1|CD227549 CCC1_52_B10.b1_A007 Callus culture/c... 119 5e-025
gb|CN127255.1|CN127255 RHOH1_22_A01.b1_A002 Acid- and alkal... 119 5e-025
gb|CN146585.1|CN146585 WOUND1_42_E05.b1_A002 Wounded leaves... 119 5e-025
gb|AW286828.2|AW286828 LG1_222_A03.b1_A002 Light Grown 1 (L... 117 2e-024
gb|BE356370.1|BE356370 DG1_124_G10.g1_A002 Dark Grown 1 (DG... 117 2e-024
gb|BG049318.1|BG049318 OV1_18_D11.g1_A002 Ovary 1 (OV1) Sor... 117 2e-024
gb|BG049527.1|BG049527 EM1_5_B12.g1_A002 Embryo 1 (EM1) Sor... 117 2e-024
gb|BG101785.1|BG101785 EM1_5_B12.b1_A002 Embryo 1 (EM1) Sor... 117 2e-024
gb|BG412512.1|BG412512 OV2_35_C06.g1_A002 Ovary 2 (OV2) Sor... 117 2e-024
gb|BG559766.1|BG559766 RHIZ2_73_D05.g1_A003 Rhizome2 (RHIZ2... 117 2e-024
gb|CD432350.1|CD432350 ETH1_29_E02.g1_A002 Ethylene-treated... 117 2e-024
gb|CN128492.1|CN128492 RHOH1_29_H02.g1_A002 Acid- and alkal... 117 2e-024
gb|CW269038.1|CW269038 104_740_11401653_116_35318_093 Sorgh... 115 7e-024
gb|BF657393.1|BF657393 OV2_24_E08.g1_A002 Ovary 2 (OV2) Sor... 115 7e-024
gb|CN127845.1|CN127845 RHOH1_25_A01.g1_A002 Acid- and alkal... 115 7e-024
gb|CX606110.1|CX606110 ANR1_1_E07.b1_A002 Anaerobic roots S... 115 7e-024
gb|BG560466.1|BG560466 RHIZ2_74_G01.b1_A003 Rhizome2 (RHIZ2... 109 5e-022
gb|AW286900.2|AW286900 LG1_222_H02.b1_A002 Light Grown 1 (L... 107 2e-021
gb|BG048045.1|BG048045 OV1_26_H12.g1_A002 Ovary 1 (OV1) Sor... 107 2e-021
gb|BG412663.1|BG412663 OV2_33_C02.b1_A002 Ovary 2 (OV2) Sor... 107 2e-021
gb|BI211437.1|BI211437 IP1_60_G05.b1_A002 Immature pannicle... 107 2e-021
gb|BI643748.1|BI643748 IP1_56_E10.b1_A002 Immature pannicle... 107 2e-021
gb|CD227862.1|CD227862 CCC1_56_H03.b1_A007 Callus culture/c... 107 2e-021
gb|CN136034.1|CN136034 OX1_40_H11.b1_A002 Oxidatively-stres... 107 2e-021
gb|CW407264.1|CW407264 fsbb001f100k14f0 Sorghum methylation... 105 7e-021
gb|BG649399.1|BG649399 EM1_78_H11.b1_A002 Embryo 1 (EM1) So... 105 7e-021
gb|CD222040.1|CD222040 CCC1_1_E10.g1_A007 Callus culture/ce... 105 7e-021
gb|CD226700.1|CD226700 CCC1_47_B03.g1_A007 Callus culture/c... 105 7e-021
gb|CD227643.1|CD227643 CCC1_52_B10.g1_A007 Callus culture/c... 105 7e-021
gb|CW323837.1|CW323837 104_818_11476843_116_35904_078 Sorgh... 103 3e-020
gb|BE360318.1|BE360318 DG1_62_E04.g1_A002 Dark Grown 1 (DG1... 103 3e-020
gb|CF427443.1|CF427443 PH1_1_A07.g1_A002 Phosphorous-defici... 103 3e-020
gb|CW041615.1|CW041615 104_275_10506649_114_30284 Sorghum m... 101 1e-019
gb|CW134909.1|CW134909 104_519_11117560_116_34831_060 Sorgh... 101 1e-019
gb|CW134910.1|CW134910 104_519_11117560_148_34827_060 Sorgh... 101 1e-019
gb|CW256800.1|CW256800 104_722_11226991_116_35152_032 Sorgh... 101 1e-019
gb|CW323838.1|CW323838 104_818_11476843_148_35908_078 Sorgh... 101 1e-019
gb|CW372271.1|CW372271 fsbb001f048b19k0 Sorghum methylation... 101 1e-019
gb|BE359286.1|BE359286 DG1_40_D05.b1_A002 Dark Grown 1 (DG1... 101 1e-019
gb|CD227380.1|CD227380 CCC1_51_H01.b1_A007 Callus culture/c... 100 4e-019
gb|CN146254.1|CN146254 WOUND1_39_D02.b1_A002 Wounded leaves... 100 4e-019
gb|CW125506.1|CW125506 104_505_11112364_148_34712_004 Sorgh... 98 2e-018
gb|CD223757.1|CD223757 CCC1_30_D11.b1_A007 Callus culture/c... 96 7e-018
gb|BG241109.1|BG241109 OV1_38_C10.b1_A002 Ovary 1 (OV1) Sor... 94 3e-017
gb|CD228287.1|CD228287 CCC1_6_H09.g1_A007 Callus culture/ce... 94 3e-017
gb|CW463846.1|CW463846 fsbb001f212l24f0 Sorghum methylation... 92 1e-016
gb|BG739434.1|BG739434 EM1_82_H04.g1_A002 Embryo 1 (EM1) So... 92 1e-016
gb|CD431147.1|CD431147 ETH1_7_B06.b1_A002 Ethylene-treated ... 92 1e-016
gb|CF429637.1|CF429637 PH1_23_B04.b1_A002 Phosphorous-defic... 92 1e-016
gb|CN125883.1|CN125883 RHOH1_14_A01.b1_A002 Acid- and alkal... 92 1e-016
gb|CW039699.1|CW039699 104_272_10505645_115_30390 Sorghum m... 88 2e-015
gb|CW041616.1|CW041616 104_275_10506649_115_30285 Sorghum m... 88 2e-015
gb|CW171385.1|CW171385 104_582_11155714_116_36532_045 Sorgh... 88 2e-015
gb|CW171386.1|CW171386 104_582_11155714_148_36531_045 Sorgh... 88 2e-015
gb|CW177756.1|CW177756 104_591_11159198_116_36610_059 Sorgh... 88 2e-015
gb|CW225715.1|CW225715 104_663_11204503_148_37208_024 Sorgh... 88 2e-015
gb|CW235743.1|CW235743 104_691_11215169_148_37401_075 Sorgh... 88 2e-015
gb|CW256801.1|CW256801 104_722_11226991_148_35148_032 Sorgh... 88 2e-015
gb|CW321278.1|CW321278 104_814_11475462_116_35933_021 Sorgh... 88 2e-015
gb|BG556320.1|BG556320 EM1_68_E05.g1_A002 Embryo 1 (EM1) So... 88 2e-015
gb|BG559141.1|BG559141 RHIZ2_55_B12.g1_A003 Rhizome2 (RHIZ2... 88 2e-015
gb|BG560741.1|BG560741 RHIZ2_64_B11.g1_A003 Rhizome2 (RHIZ2... 88 2e-015
gb|BI211697.1|BI211697 IP1_60_G05.g1_A002 Immature pannicle... 88 2e-015
gb|CD219638.1|CD219638 CCC1_58_F06.b1_A007 Callus culture/c... 88 2e-015
gb|CD229484.1|CD229484 CCC1_16_D06.b1_A007 Callus culture/c... 88 2e-015
gb|CN143945.1|CN143945 WOUND1_19_G06.b1_A002 Wounded leaves... 88 2e-015
gb|BG241855.1|BG241855 RHIZ2_51_E07.b1_A003 Rhizome2 (RHIZ2... 86 7e-015
gb|BG412378.1|BG412378 OV2_33_C02.g1_A002 Ovary 2 (OV2) Sor... 86 7e-015
gb|CF427057.1|CF427057 PH1_3_D05.b1_A002 Phosphorous-defici... 86 7e-015
gb|CX619969.1|CX619969 GABR1_49_B08.b1_A002 GA- or brassino... 86 7e-015
gb|CX620331.1|CX620331 GABR1_51_E02.b1_A002 GA- or brassino... 86 7e-015
gb|CW060786.1|CW060786 104_304_10520046_114_30143 Sorghum m... 84 3e-014
gb|CW115054.1|CW115054 104_490_11106333_116_34592_095 Sorgh... 84 3e-014
gb|CW387885.1|CW387885 fsbb001f072g19f0 Sorghum methylation... 84 3e-014
gb|BE362334.1|BE362334 DG1_85_A02.g1_A002 Dark Grown 1 (DG1... 84 3e-014
gb|BG158524.1|BG158524 RHIZ2_41_E04.g1_A003 Rhizome2 (RHIZ2... 84 3e-014
gb|BI245792.1|BI245792 IP1_64_D12.g1_A002 Immature pannicle... 84 3e-014
gb|CW089886.1|CW089886 104_435_10948967_116_32598_088 Sorgh... 82 1e-013
gb|CW387886.1|CW387886 fsbb001f072g19k0 Sorghum methylation... 82 1e-013
gb|CD227950.1|CD227950 CCC1_56_F12.g1_A007 Callus culture/c... 82 1e-013
gb|CN127847.1|CN127847 RHOH1_25_A03.g1_A002 Acid- and alkal... 82 1e-013
gb|CN133273.1|CN133273 OX1_11_E08.b1_A002 Oxidatively-stres... 82 1e-013
gb|CX616493.1|CX616493 GABR1_28_F03.b1_A002 GA- or brassino... 82 1e-013
gb|CW039698.1|CW039698 104_272_10505645_114_30389 Sorghum m... 80 4e-013
gb|CW060787.1|CW060787 104_304_10520046_115_30144 Sorghum m... 80 4e-013
gb|CW115055.1|CW115055 104_490_11106333_148_34588_095 Sorgh... 80 4e-013
gb|AI724776.1|AI724776 RHIZ1_9_A10.y2_A001 Rhizome1 (RHIZ1)... 80 4e-013
gb|CF429158.1|CF429158 PH1_20_E04.b1_A002 Phosphorous-defic... 80 4e-013
gb|CF429485.1|CF429485 PH1_22_A01.b1_A002 Phosphorous-defic... 80 4e-013
gb|CF430814.1|CF430814 NIT1_2_G04.g1_A002 Nitrogen-deficien... 80 4e-013
gb|CN125969.1|CN125969 RHOH1_14_A01.g1_A002 Acid- and alkal... 80 4e-013
gb|CW038650.1|CW038650 104_271_10505052_114_30387 Sorghum m... 78 2e-012
gb|CW300425.1|CW300425 104_783_11463650_148_36247_001 Sorgh... 78 2e-012
gb|CW303659.1|CW303659 104_788_11465359_148_35697_028 Sorgh... 78 2e-012
gb|AW677581.1|AW677581 DG1_8_G07.g1_A002 Dark Grown 1 (DG1)... 78 2e-012
gb|BF657412.1|BF657412 OV2_24_G10.g1_A002 Ovary 2 (OV2) Sor... 78 2e-012
gb|BG048321.1|BG048321 OV1_16_G02.g1_A002 Ovary 1 (OV1) Sor... 78 2e-012
gb|BG159424.1|BG159424 OV2_7_F12.g1_A002 Ovary 2 (OV2) Sorg... 78 2e-012
gb|BG559187.1|BG559187 RHIZ2_55_F12.g1_A003 Rhizome2 (RHIZ2... 78 2e-012
gb|BG560732.1|BG560732 RHIZ2_64_A10.g1_A003 Rhizome2 (RHIZ2... 78 2e-012
gb|BI139612.1|BI139612 IP1_46_G07.g1_A002 Immature pannicle... 78 2e-012
gb|BI351103.1|BI351103 IP1_69_H10.g1_A002 Immature pannicle... 78 2e-012
gb|CD220740.1|CD220740 CCC1_69_G07.b1_A007 Callus culture/c... 78 2e-012
gb|CD220860.1|CD220860 CCC1_72_B03.b1_A007 Callus culture/c... 78 2e-012
gb|CD221690.1|CD221690 CCC1_70_E10.b1_A007 Callus culture/c... 78 2e-012
gb|CD222137.1|CD222137 CCC1_2_B01.b1_A007 Callus culture/ce... 78 2e-012
gb|CD223142.1|CD223142 CCC1_26_C06.b1_A007 Callus culture/c... 78 2e-012
gb|CD223154.1|CD223154 CCC1_26_F12.b1_A007 Callus culture/c... 78 2e-012
gb|CD223263.1|CD223263 CCC1_27_E07.b1_A007 Callus culture/c... 78 2e-012
gb|CD223643.1|CD223643 CCC1_29_B07.b1_A007 Callus culture/c... 78 2e-012
gb|CD225094.1|CD225094 CCC1_38_F05.b1_A007 Callus culture/c... 78 2e-012
gb|CD225932.1|CD225932 CCC1_42_G10.b1_A007 Callus culture/c... 78 2e-012
gb|CD227112.1|CD227112 CCC1_4_D07.b1_A007 Callus culture/ce... 78 2e-012
gb|CD227127.1|CD227127 CCC1_4_A10.b1_A007 Callus culture/ce... 78 2e-012
gb|CD463889.1|CD463889 ETH1_47_B11.b1_A002 Ethylene-treated... 78 2e-012
gb|CN146641.1|CN146641 WOUND1_42_E05.g1_A002 Wounded leaves... 78 2e-012
gb|CX607383.1|CX607383 ANR1_8_G05.b1_A002 Anaerobic roots S... 78 2e-012
gb|CX610193.1|CX610193 ANR1_17_E04.b1_A002 Anaerobic roots ... 78 2e-012
gb|CX616323.1|CX616323 GABR1_27_F04.b1_A002 GA- or brassino... 78 2e-012
gb|BE356171.1|BE356171 DG1_123_G07.b1_A002 Dark Grown 1 (DG... 76 6e-012
gb|BG159679.1|BG159679 OV2_7_F12.b1_A002 Ovary 2 (OV2) Sorg... 76 6e-012
gb|BG558178.1|BG558178 RHIZ2_64_A10.b1_A003 Rhizome2 (RHIZ2... 76 6e-012
gb|CN149473.1|CN149473 WOUND1_63_A11.b1_A002 Wounded leaves... 76 6e-012
gb|CL191208.1|CL191208 104_410_10906632_114_32533_096 Sorgh... 74 3e-011
gb|CW229188.1|CW229188 104_670_11207171_116_37259_042 Sorgh... 74 3e-011
gb|CW229189.1|CW229189 104_670_11207171_148_37260_042 Sorgh... 74 3e-011
gb|CW321279.1|CW321279 104_814_11475462_148_35937_021 Sorgh... 74 3e-011
gb|CW321935.1|CW321935 104_815_11475820_148_35943_008 Sorgh... 74 3e-011
gb|CD235977.1|CD235977 SS1_25_E11.b1_A012 Salt-stressed see... 74 3e-011
gb|CN131508.1|CN131508 RHOH1_48_C07.g1_A002 Acid- and alkal... 74 3e-011
gb|CW271902.1|CW271902 104_744_11403221_116_35346_027 Sorgh... 72 1e-010
gb|CW271903.1|CW271903 104_744_11403221_116_36221_027 Sorgh... 72 1e-010
gb|CW286416.1|CW286416 104_764_11410865_148_35517_077 Sorgh... 72 1e-010
gb|AW284995.1|AW284995 LG1_297_A04.g1_A002 Light Grown 1 (L... 72 1e-010
gb|CD225958.1|CD225958 CCC1_42_G10.g1_A007 Callus culture/c... 72 1e-010
gb|CD430458.1|CD430458 ETH1_19_F11.b1_A002 Ethylene-treated... 72 1e-010
gb|CD432148.1|CD432148 ETH1_26_B01.b1_A002 Ethylene-treated... 72 1e-010
gb|CN124005.1|CN124005 RHOH1_2_B05.b1_A002 Acid- and alkali... 72 1e-010
gb|BF657491.1|BF657491 OV2_24_G10.b1_A002 Ovary 2 (OV2) Sor... 70 4e-010
gb|CD227727.1|CD227727 CCC1_53_C01.b1_A007 Callus culture/c... 70 4e-010
gb|CD228001.1|CD228001 CCC1_5_B06.b1_A007 Callus culture/ce... 70 4e-010
gb|CD229161.1|CD229161 CCC1_13_B09.b1_A007 Callus culture/c... 70 4e-010
gb|CF429693.1|CF429693 PH1_23_B11.g1_A002 Phosphorous-defic... 70 4e-010
gb|CN127336.1|CN127336 RHOH1_22_A01.g3_A002 Acid- and alkal... 66 6e-009
gb|CW389685.1|CW389685 fsbb001f075a01f0 Sorghum methylation... 64 2e-008
gb|CF429640.1|CF429640 PH1_23_B11.b1_A002 Phosphorous-defic... 64 2e-008
gb|CW064935.1|CW064935 104_311_10522851_115_30121 Sorghum m... 62 1e-007
gb|CW389686.1|CW389686 fsbb001f075a01k0 Sorghum methylation... 62 1e-007
gb|CD221966.1|CD221966 CCC1_1_E10.b1_A007 Callus culture/ce... 62 1e-007
gb|BZ780043.1|BZ780043 ii36g12.g1 WGS-SbicolorF (DH5a methy... 60 4e-007
gb|CW430464.1|CW430464 fsbb001f144d01f0 Sorghum methylation... 60 4e-007
gb|CW435340.1|CW435340 fsbb001f151h04k0 Sorghum methylation... 60 4e-007
gb|CN131435.1|CN131435 RHOH1_48_C07.b1_A002 Acid- and alkal... 60 4e-007
gb|CW217959.1|CW217959 104_651_11195928_148_37066_090 Sorgh... 58 1e-006
gb|CW218082.1|CW218082 104_651_11196005_148_37457_021 Sorgh... 58 1e-006
gb|CW433265.1|CW433265 fsbb001f148g13f0 Sorghum methylation... 58 1e-006
gb|CF427571.1|CF427571 PH1_16_B04.b1_A002 Phosphorous-defic... 58 1e-006
gb|CX613415.1|CX613415 GABR1_8_B11.b1_A002 GA- or brassinol... 58 1e-006
gb|CW217957.1|CW217957 104_651_11195928_116_37067_090 Sorgh... 56 6e-006
gb|CW235742.1|CW235742 104_691_11215169_116_37404_075 Sorgh... 56 6e-006
gb|BF657469.1|BF657469 OV2_24_E08.b1_A002 Ovary 2 (OV2) Sor... 56 6e-006
gb|BG412261.1|BG412261 OV2_39_G10.b1_A002 Ovary 2 (OV2) Sor... 56 6e-006
gb|CF429531.1|CF429531 PH1_22_A01.g1_A002 Phosphorous-defic... 56 6e-006
gb|CL186579.1|CL186579 104_401_10900303_116_32412_024 Sorgh... 54 2e-005
gb|CW028807.1|CW028807 104_256_10499314_114_30399 Sorghum m... 54 2e-005
gb|CW129152.1|CW129152 104_511_11114403_148_34760_014 Sorgh... 54 2e-005
gb|CW147025.1|CW147025 104_540_11139300_116_34999_046 Sorgh... 54 2e-005
gb|CW271018.1|CW271018 104_743_11402765_116_35340_031 Sorgh... 54 2e-005
gb|CW365646.1|CW365646 fsbb001f038e14f0 Sorghum methylation... 54 2e-005
gb|CW463847.1|CW463847 fsbb001f212l24k0 Sorghum methylation... 54 2e-005
gb|BG357082.1|BG357082 OV2_9_F08.b1_A002 Ovary 2 (OV2) Sorg... 54 2e-005
gb|CF480213.1|CF480213 POL1_64_A03.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF480399.1|CF480399 POL1_65_C01.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF480420.1|CF480420 POL1_65_D12.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF480621.1|CF480621 POL1_66_H01.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF480759.1|CF480759 POL1_67_E09.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF480873.1|CF480873 POL1_68_B09.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF480920.1|CF480920 POL1_68_G11.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF481027.1|CF481027 POL1_69_B12.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF481074.1|CF481074 POL1_69_G03.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF481205.1|CF481205 POL1_70_C11.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF481211.1|CF481211 POL1_70_D05.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF481259.1|CF481259 POL1_70_H09.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF481551.1|CF481551 POL1_72_D08.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF481569.1|CF481569 POL1_72_F03.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF481599.1|CF481599 POL1_72_H10.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF482205.1|CF482205 POL1_5_C03.g1_A002 Pollen Sorghum bi... 54 2e-005
gb|CF482374.1|CF482374 POL1_6_C07.g1_A002 Pollen Sorghum bi... 54 2e-005
gb|CF482393.1|CF482393 POL1_6_E04.g1_A002 Pollen Sorghum bi... 54 2e-005
gb|CF482592.1|CF482592 POL1_7_H10.g1_A002 Pollen Sorghum bi... 54 2e-005
gb|CF482693.1|CF482693 POL1_8_C03.g1_A002 Pollen Sorghum bi... 54 2e-005
gb|CF482717.1|CF482717 POL1_8_E09.g1_A002 Pollen Sorghum bi... 54 2e-005
gb|CF482832.1|CF482832 POL1_9_A09.g1_A002 Pollen Sorghum bi... 54 2e-005
gb|CF482864.1|CF482864 POL1_9_D06.g1_A002 Pollen Sorghum bi... 54 2e-005
gb|CF483102.1|CF483102 POL1_11_F12.b1_A002 Pollen Sorghum b... 54 2e-005
gb|CF483193.1|CF483193 POL1_12_H04.b1_A002 Pollen Sorghum b... 54 2e-005
gb|CF483243.1|CF483243 POL1_12_H02.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF483372.1|CF483372 POL1_21_G03.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF483476.1|CF483476 POL1_22_C03.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF483492.1|CF483492 POL1_22_D08.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF483493.1|CF483493 POL1_22_D09.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF483531.1|CF483531 POL1_22_H07.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF483749.1|CF483749 POL1_24_A08.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF483798.1|CF483798 POL1_24_F05.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF483818.1|CF483818 POL1_24_H06.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF484013.1|CF484013 POL1_2_C04.g1_A002 Pollen Sorghum bi... 54 2e-005
gb|CF484036.1|CF484036 POL1_2_E10.g1_A002 Pollen Sorghum bi... 54 2e-005
gb|CF484822.1|CF484822 POL1_27_E09.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF484854.1|CF484854 POL1_27_H08.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF484929.1|CF484929 POL1_28_A05.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF485008.1|CF485008 POL1_28_H05.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF485397.1|CF485397 POL1_31_F11.b1_A002 Pollen Sorghum b... 54 2e-005
gb|CF485478.1|CF485478 POL1_31_F08.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF485481.1|CF485481 POL1_31_F11.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF485602.1|CF485602 POL1_32_B09.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF485778.1|CF485778 POL1_33_D04.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF485792.1|CF485792 POL1_33_E07.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF485806.1|CF485806 POL1_33_F11.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF485944.1|CF485944 POL1_34_E10.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF486388.1|CF486388 POL1_37_A02.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF486397.1|CF486397 POL1_37_A11.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF486430.1|CF486430 POL1_37_D08.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF486445.1|CF486445 POL1_37_E12.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF486558.1|CF486558 POL1_38_A03.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF486729.1|CF486729 POL1_39_A03.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF486734.1|CF486734 POL1_39_A08.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF486793.1|CF486793 POL1_39_F09.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF486890.1|CF486890 POL1_40_A11.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF486923.1|CF486923 POL1_40_E01.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF486939.1|CF486939 POL1_40_F07.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF486955.1|CF486955 POL1_40_H02.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF487043.1|CF487043 POL1_41_A01.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF487100.1|CF487100 POL1_41_F08.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF487209.1|CF487209 POL1_42_A05.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF487281.1|CF487281 POL1_42_G08.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF487380.1|CF487380 POL1_43_A11.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF487381.1|CF487381 POL1_43_A12.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF487613.1|CF487613 POL1_44_H01.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF487615.1|CF487615 POL1_44_H03.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF487766.1|CF487766 POL1_45_G01.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF487944.1|CF487944 POL1_46_G09.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF488093.1|CF488093 POL1_47_F05.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF488121.1|CF488121 POL1_47_H10.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF488212.1|CF488212 POL1_48_A09.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF488683.1|CF488683 POL1_51_C06.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF488715.1|CF488715 POL1_51_F03.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF488724.1|CF488724 POL1_51_F12.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF488729.1|CF488729 POL1_51_G05.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF488985.1|CF488985 POL1_53_A03.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF489302.1|CF489302 POL1_56_C04.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF489303.1|CF489303 POL1_56_C05.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF489306.1|CF489306 POL1_56_C08.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF489415.1|CF489415 POL1_57_A10.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF489452.1|CF489452 POL1_57_E01.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF489454.1|CF489454 POL1_57_E03.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF489590.1|CF489590 POL1_58_B04.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF489602.1|CF489602 POL1_58_C06.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF489616.1|CF489616 POL1_58_D08.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF489634.1|CF489634 POL1_58_F03.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF489646.1|CF489646 POL1_58_G05.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF489774.1|CF489774 POL1_59_C03.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF489830.1|CF489830 POL1_59_H01.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF489840.1|CF489840 POL1_59_H12.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF489893.1|CF489893 POL1_61_F05.b1_A002 Pollen Sorghum b... 54 2e-005
gb|CF489938.1|CF489938 POL1_61_B08.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF489969.1|CF489969 POL1_61_E05.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF489970.1|CF489970 POL1_61_E06.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF489979.1|CF489979 POL1_61_F05.g1_A002 Pollen Sorghum b... 54 2e-005
gb|CF489991.1|CF489991 POL1_61_G05.g1_A002 Pollen Sorghum b... 54 2e-005
gb|BZ349112.1|BZ349112 hq87c03.g1 WGS-SbicolorF (JM107 adap... 52 9e-005
gb|CL165129.1|CL165129 104_359_10808375_114_31816_359 Sorgh... 52 9e-005
gb|CW054609.1|CW054609 104_295_10516628_114_30186 Sorghum m... 52 9e-005
gb|CW061065.1|CW061065 104_304_10520199_115_30144 Sorghum m... 52 9e-005
gb|CW099293.1|CW099293 104_466_11003472_148_34379_094 Sorgh... 52 9e-005
gb|CW140342.1|CW140342 104_530_11135731_116_34912_066 Sorgh... 52 9e-005
gb|CW204078.1|CW204078 104_631_11186348_148_37094_066 Sorgh... 52 9e-005
gb|CW359785.1|CW359785 fsbb001f027j03f0 Sorghum methylation... 52 9e-005
gb|CW402616.1|CW402616 fsbb001f093p05k0 Sorghum methylation... 52 9e-005
gb|CW454419.1|CW454419 fsbb001f198n16f0 Sorghum methylation... 52 9e-005
gb|BE357900.1|BE357900 DG1_23_H03.b1_A002 Dark Grown 1 (DG1... 52 9e-005
gb|BE357973.1|BE357973 DG1_23_H03.g1_A002 Dark Grown 1 (DG1... 52 9e-005
gb|BG049195.1|BG049195 OV1_24_G03.g1_A002 Ovary 1 (OV1) Sor... 52 9e-005
gb|CD432496.1|CD432496 ETH1_30_C04.b1_A002 Ethylene-treated... 52 9e-005
gb|CD462510.1|CD462510 ETH1_38_D10.b1_A002 Ethylene-treated... 52 9e-005
gb|CF432901.1|CF432901 NIT1_19_D07.g1_A002 Nitrogen-deficie... 52 9e-005
gb|CF488833.1|CF488833 POL1_52_B08.g1_A002 Pollen Sorghum b... 52 9e-005
gb|CN125001.1|CN125001 RHOH1_8_F08.b1_A002 Acid- and alkali... 52 9e-005
gb|CN125086.1|CN125086 RHOH1_8_F08.g1_A002 Acid- and alkali... 52 9e-005
gb|CN128214.1|CN128214 RHOH1_27_G06.g1_A002 Acid- and alkal... 52 9e-005
gb|CN128815.1|CN128815 RHOH1_31_F05.g1_A002 Acid- and alkal... 52 9e-005
gb|CN130578.1|CN130578 RHOH1_42_A01.g1_A002 Acid- and alkal... 52 9e-005
gb|CX608067.1|CX608067 ANR1_32_A06.g1_A002 Anaerobic roots ... 52 9e-005
gb|DN552513.1|DN552513 pSHR-RT-A-H1_H09_C105 pSHR Sorghum h... 52 9e-005
gb|BZ346961.1|BZ346961 hw02c11.b1 WGS-SbicolorF (JM107 adap... 50 4e-004
gb|CL159497.1|CL159497 104_349_10804291_114_31381_115 Sorgh... 50 4e-004
gb|CW072445.1|CW072445 104_325_10592270_114_30536 Sorghum m... 50 4e-004
gb|CW113135.1|CW113135 104_487_11105276_116_34556_076 Sorgh... 50 4e-004
gb|CW137101.1|CW137101 104_523_11119113_148_34864_041 Sorgh... 50 4e-004
gb|CW223947.1|CW223947 104_660_11203186_148_37446_047 Sorgh... 50 4e-004
gb|CW228007.1|CW228007 104_667_11206124_116_37246_070 Sorgh... 50 4e-004
gb|CW322132.1|CW322132 104_815_11475928_116_35944_052 Sorgh... 50 4e-004
gb|CW333019.1|CW333019 104_830_11481720_116_36037_082 Sorgh... 50 4e-004
gb|CW333020.1|CW333020 104_830_11481720_148_36038_082 Sorgh... 50 4e-004
gb|CW454571.1|CW454571 fsbb001f199b11f0 Sorghum methylation... 50 4e-004
gb|CW784462.1|CW784462 SP__Bb0024I23.r SP__Bb Sorghum propi... 50 4e-004
gb|CF480054.1|CF480054 POL1_63_A12.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF480166.1|CF480166 POL1_64_D03.b1_A002 Pollen Sorghum b... 50 4e-004
gb|CF480248.1|CF480248 POL1_64_D03.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF480285.1|CF480285 POL1_64_G06.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF480411.1|CF480411 POL1_65_D03.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF480457.1|CF480457 POL1_65_H06.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF480711.1|CF480711 POL1_67_A06.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF480730.1|CF480730 POL1_67_C02.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF481066.1|CF481066 POL1_69_F07.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF481186.1|CF481186 POL1_70_B02.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF481234.1|CF481234 POL1_70_F07.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF481418.1|CF481418 POL1_71_H03.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF482510.1|CF482510 POL1_7_A01.g1_A002 Pollen Sorghum bi... 50 4e-004
gb|CF482685.1|CF482685 POL1_8_B05.g1_A002 Pollen Sorghum bi... 50 4e-004
gb|CF482799.1|CF482799 POL1_9_F05.b1_A002 Pollen Sorghum bi... 50 4e-004
gb|CF482883.1|CF482883 POL1_9_F05.g1_A002 Pollen Sorghum bi... 50 4e-004
gb|CF483096.1|CF483096 POL1_11_F05.b1_A002 Pollen Sorghum b... 50 4e-004
gb|CF483137.1|CF483137 POL1_12_B09.b1_A002 Pollen Sorghum b... 50 4e-004
gb|CF483169.1|CF483169 POL1_12_E10.b1_A002 Pollen Sorghum b... 50 4e-004
gb|CF483197.1|CF483197 POL1_12_H10.b1_A002 Pollen Sorghum b... 50 4e-004
gb|CF483231.1|CF483231 POL1_12_E10.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF483330.1|CF483330 POL1_21_B07.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF483416.1|CF483416 POL1_22_D07.b1_A002 Pollen Sorghum b... 50 4e-004
gb|CF483683.1|CF483683 POL1_24_B02.b1_A002 Pollen Sorghum b... 50 4e-004
gb|CF483976.1|CF483976 POL1_2_G04.b1_A002 Pollen Sorghum bi... 50 4e-004
gb|CF483980.1|CF483980 POL1_2_G08.b1_A002 Pollen Sorghum bi... 50 4e-004
gb|CF484108.1|CF484108 POL1_3_E05.b1_A002 Pollen Sorghum bi... 50 4e-004
gb|CF484397.1|CF484397 POL1_25_C05.b1_A002 Pollen Sorghum b... 50 4e-004
gb|CF484606.1|CF484606 POL1_26_H05.b1_A002 Pollen Sorghum b... 50 4e-004
gb|CF484704.1|CF484704 POL1_27_A11.b1_A002 Pollen Sorghum b... 50 4e-004
gb|CF484901.1|CF484901 POL1_28_F03.b1_A002 Pollen Sorghum b... 50 4e-004
gb|CF484984.1|CF484984 POL1_28_F03.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF485026.1|CF485026 POL1_29_A12.b1_A002 Pollen Sorghum b... 50 4e-004
gb|CF485051.1|CF485051 POL1_29_D08.b1_A002 Pollen Sorghum b... 50 4e-004
gb|CF485106.1|CF485106 POL1_29_A12.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF485127.1|CF485127 POL1_29_C12.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF485229.1|CF485229 POL1_30_E09.b1_A002 Pollen Sorghum b... 50 4e-004
gb|CF485957.1|CF485957 POL1_34_G01.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF486512.1|CF486512 POL1_38_D06.b1_A002 Pollen Sorghum b... 50 4e-004
gb|CF486514.1|CF486514 POL1_38_D08.b1_A002 Pollen Sorghum b... 50 4e-004
gb|CF486570.1|CF486570 POL1_38_B03.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF486596.1|CF486596 POL1_38_D06.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF486598.1|CF486598 POL1_38_D08.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF486737.1|CF486737 POL1_39_A11.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF486753.1|CF486753 POL1_39_C04.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF486763.1|CF486763 POL1_39_D02.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF487066.1|CF487066 POL1_41_C03.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF487232.1|CF487232 POL1_42_C05.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF487377.1|CF487377 POL1_43_A08.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF487409.1|CF487409 POL1_43_D04.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF487484.1|CF487484 POL1_44_C08.b1_A002 Pollen Sorghum b... 50 4e-004
gb|CF487513.1|CF487513 POL1_44_F08.b1_A002 Pollen Sorghum b... 50 4e-004
gb|CF487564.1|CF487564 POL1_44_C08.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF487622.1|CF487622 POL1_44_H12.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF487722.1|CF487722 POL1_45_C01.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF487790.1|CF487790 POL1_46_A03.b1_A002 Pollen Sorghum b... 50 4e-004
gb|CF487872.1|CF487872 POL1_46_A03.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF487896.1|CF487896 POL1_46_C05.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF488078.1|CF488078 POL1_47_D10.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF488105.1|CF488105 POL1_47_G06.g1_A002 Pollen Sorghum b... 50 4e-004
gb|CF488299.1|CF488299 POL1_49_A10.b1_A002 Pollen Sorghum b... 50 4e-004
gb|CF488363.1|CF488363 POL1_49_A10.g1_A002 Pollen Sorghum b... 50 4e-004
>gb|CW321934.1|CW321934 104_815_11475820_116_35944_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11475820, DNA
sequence
Length = 668
Score = 696 bits (351), Expect = 0.0
Identities = 483/527 (91%)
Strand = Plus / Plus
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
|||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 132 cagatccgttgcaaggcccaccctgcttgctccggcgtgccggagacggtgatcatcacg 191
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 192 gacatgaactactaccccgtggccccctaccacttcgacctcagcggcaccgccttcgga 251
Query: 242 gccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccag 301
|||||||| |||||||| | |||||||||||| | |||||||| |||||||||||||||
Sbjct: 252 gccatggccaaagacgaccgcaacgacgagctgcgccacgcaggcatcatcgacatccag 311
Query: 302 ttcaagagggttccctgccagtaccctggtctgacggtgaccttccacatcgagcgcggc 361
||||||||||||||||||||||||||||| || || || |||||||||||||||||||||
Sbjct: 312 ttcaagagggttccctgccagtaccctggcctcaccgtcaccttccacatcgagcgcggc 371
Query: 362 tccaaccccaactacctggcggtgctggtggagtacgagaacggcgacggcgacgtggtg 421
|||||||| ||||||||||| ||||| || ||||||| ||||||||||||||||| |||
Sbjct: 372 tccaacccaaactacctggccgtgctcgtcgagtacggcaacggcgacggcgacgtcgtg 431
Query: 422 caggtggacctgatggagtccagccccgacgacggcgagcccaccggcgtctgggagccc 481
||||| ||||| ||||||||| || ||||||||||||||||||||||||| |||||||||
Sbjct: 432 caggtcgacctcatggagtcccgcaccgacgacggcgagcccaccggcgtgtgggagccc 491
Query: 482 atgcgcgagtcctggggctccatatggaggatggacacccgccggccgctgcaagggccc 541
||||||||||||||||||||||| |||||||||||||| || || |||||||| || |||
Sbjct: 492 atgcgcgagtcctggggctccatctggaggatggacacgcgacgcccgctgcagggaccc 551
Query: 542 ttctcgctgcgcgtcaccaacgagtccggcaagacgctggtggcggaccaggtcattccg 601
|||||||||||||||||||||||||||||||||||||| || || ||||||||||| ||
Sbjct: 552 ttctcgctgcgcgtcaccaacgagtccggcaagacgctcgtcgccgaccaggtcatccca 611
Query: 602 gcagactggcagcccgacaacgtctacagctccatcgtccagttcga 648
|| ||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 612 gccgactggcagccagacaacgtctacagctctatcgtccagttcga 658
>gb|CW247381.1|CW247381 104_708_11221754_116_36078_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221754, DNA
sequence
Length = 639
Score = 579 bits (292), Expect = e-163
Identities = 400/436 (91%)
Strand = Plus / Plus
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
|||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 204 cagatccgttgcaaggcccaccctgcttgctccggcgtgccggagacggtgatcatcacg 263
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 264 gacatgaactactaccccgtggccccctaccacttcgacctcagcggcaccgccttcgga 323
Query: 242 gccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccag 301
|||||||| |||||||| | |||||||||||| | |||||||| |||||||||||||||
Sbjct: 324 gccatggccaaagacgaccgcaacgacgagctgcgccacgcaggcatcatcgacatccag 383
Query: 302 ttcaagagggttccctgccagtaccctggtctgacggtgaccttccacatcgagcgcggc 361
||||||||||||||||||||||||||||| || || || |||||||||||||||||||||
Sbjct: 384 ttcaagagggttccctgccagtaccctggcctcaccgtcaccttccacatcgagcgcggc 443
Query: 362 tccaaccccaactacctggcggtgctggtggagtacgagaacggcgacggcgacgtggtg 421
|||||||| ||||||||||| ||||| || ||||||| ||||||||||||||||| |||
Sbjct: 444 tccaacccaaactacctggccgtgctcgtcgagtacggcaacggcgacggcgacgtcgtg 503
Query: 422 caggtggacctgatggagtccagccccgacgacggcgagcccaccggcgtctgggagccc 481
||||| ||||| ||||||||| || ||||||||||||||||||||||||| |||||||||
Sbjct: 504 caggtcgacctcatggagtcccgcaccgacgacggcgagcccaccggcgtgtgggagccc 563
Query: 482 atgcgcgagtcctggggctccatatggaggatggacacccgccggccgctgcaagggccc 541
||||||||||||||||||||||| |||||||||||||| || || |||||||| || |||
Sbjct: 564 atgcgcgagtcctggggctccatctggaggatggacacgcgacgcccgctgcagggaccc 623
Query: 542 ttctcgctgcgcgtca 557
||||||||||||||||
Sbjct: 624 ttctcgctgcgcgtca 639
Score = 95.6 bits (48), Expect = 7e-018
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 61 gatgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgcta 120
||||||||| ||||||||||||||| ||||||||||||||||||||||||| || |||||
Sbjct: 1 gatgacgtcctgcggcaacgagccactcttcaaggacggcaaaggatgcggctcatgcta 60
Query: 121 ccag 124
||||
Sbjct: 61 ccag 64
>gb|CL159722.1|CL159722 104_349_10804467_116_31382_291 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10804467, DNA
sequence
Length = 687
Score = 575 bits (290), Expect = e-162
Identities = 398/434 (91%)
Strand = Plus / Plus
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
|||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 254 cagatccgttgcaaggcccaccctgcttgctccggcgtgccggagacggtgatcatcacg 313
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 314 gacatgaactactaccccgtggccccctaccacttcgacctcagcggcaccgccttcgga 373
Query: 242 gccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccag 301
|||||||| |||||||| | |||||||||||| | |||||||| |||||||||||||||
Sbjct: 374 gccatggccaaagacgaccgcaacgacgagctgcgccacgcaggcatcatcgacatccag 433
Query: 302 ttcaagagggttccctgccagtaccctggtctgacggtgaccttccacatcgagcgcggc 361
||||||||||||||||||||||||||||| || || || |||||||||||||||||||||
Sbjct: 434 ttcaagagggttccctgccagtaccctggcctcaccgtcaccttccacatcgagcgcggc 493
Query: 362 tccaaccccaactacctggcggtgctggtggagtacgagaacggcgacggcgacgtggtg 421
|||||||| ||||||||||| ||||| || ||||||| ||||||||||||||||| |||
Sbjct: 494 tccaacccaaactacctggccgtgctcgtcgagtacggcaacggcgacggcgacgtcgtg 553
Query: 422 caggtggacctgatggagtccagccccgacgacggcgagcccaccggcgtctgggagccc 481
||||| ||||| ||||||||| || ||||||||||||||||||||||||| |||||||||
Sbjct: 554 caggtcgacctcatggagtcccgcaccgacgacggcgagcccaccggcgtgtgggagccc 613
Query: 482 atgcgcgagtcctggggctccatatggaggatggacacccgccggccgctgcaagggccc 541
||||||||||||||||||||||| |||||||||||||| || || |||||||| || |||
Sbjct: 614 atgcgcgagtcctggggctccatctggaggatggacacgcgacgcccgctgcagggaccc 673
Query: 542 ttctcgctgcgcgt 555
||||||||||||||
Sbjct: 674 ttctcgctgcgcgt 687
Score = 159 bits (80), Expect = 5e-037
Identities = 101/108 (93%)
Strand = Plus / Plus
Query: 17 ggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtgcggc 76
||||||||||||||||||||||| ||| | ||||||||||||||||||||||| ||||||
Sbjct: 7 ggcgcgtgcggcttcaagggcgtcaacctcccacctttctcggcgatgacgtcctgcggc 66
Query: 77 aacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccag 124
||||||||| ||||||||||||||||||||||||| || |||||||||
Sbjct: 67 aacgagccactcttcaaggacggcaaaggatgcggctcatgctaccag 114
>gb|BZ367428.1|BZ367428 id04d05.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone id04d05 5', DNA sequence
Length = 783
Score = 490 bits (247), Expect = e-136
Identities = 340/371 (91%)
Strand = Plus / Plus
Query: 278 cacgcaggaatcatcgacatccagttcaagagggttccctgccagtaccctggtctgacg 337
|||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 23 cacgcaggcatcatcgacatccagttcaagagggttccctgccagtaccctggcctcacc 82
Query: 338 gtgaccttccacatcgagcgcggctccaaccccaactacctggcggtgctggtggagtac 397
|| ||||||||||||||||||||||||||||| ||||||||||| ||||| || ||||||
Sbjct: 83 gtcaccttccacatcgagcgcggctccaacccaaactacctggccgtgctcgtcgagtac 142
Query: 398 gagaacggcgacggcgacgtggtgcaggtggacctgatggagtccagccccgacgacggc 457
| ||||||||||||||||| |||||||| ||||| ||||||||| || |||||||||||
Sbjct: 143 ggcaacggcgacggcgacgtcgtgcaggtcgacctcatggagtcccgcaccgacgacggc 202
Query: 458 gagcccaccggcgtctgggagcccatgcgcgagtcctggggctccatatggaggatggac 517
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 203 gagcccaccggcgtgtgggagcccatgcgcgagtcctggggctccatctggaggatggac 262
Query: 518 acccgccggccgctgcaagggcccttctcgctgcgcgtcaccaacgagtccggcaagacg 577
|| || || |||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 263 acgcgacgcccgctgcagggacccttctcgctgcgcgtcaccaacgagtccggcaagacg 322
Query: 578 ctggtggcggaccaggtcattccggcagactggcagcccgacaacgtctacagctccatc 637
|| || || ||||||||||| || || ||||||||||| ||||||||||||||||| |||
Sbjct: 323 ctcgtcgccgaccaggtcatcccagccgactggcagccagacaacgtctacagctctatc 382
Query: 638 gtccagttcga 648
|||||||||||
Sbjct: 383 gtccagttcga 393
Score = 48.1 bits (24), Expect = 0.001
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 869 cgagacgtcgcttgtgacgtccgtccagtgca 900
|||||||||||||||| |||||||| ||||||
Sbjct: 727 cgagacgtcgcttgtgccgtccgtcgagtgca 758
>gb|CW154770.1|CW154770 104_557_11145777_148_36360_047 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145777, DNA
sequence
Length = 672
Score = 422 bits (213), Expect = e-116
Identities = 294/321 (91%)
Strand = Plus / Minus
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
|||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 322 cagatccgttgcaaggcccaccctgcttgctccggcgtgccggagacggtgatcatcacg 263
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 262 gacatgaactactaccccgtggccccctaccacttcgacctcagcggcaccgccttcgga 203
Query: 242 gccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccag 301
|||||||| |||||||| | |||||||||||| | |||||||| |||||||||||||||
Sbjct: 202 gccatggccaaagacgaccgcaacgacgagctgcgccacgcaggcatcatcgacatccag 143
Query: 302 ttcaagagggttccctgccagtaccctggtctgacggtgaccttccacatcgagcgcggc 361
||||||||||||||||||||||||||||| || || || |||||||||||||||||||||
Sbjct: 142 ttcaagagggttccctgccagtaccctggcctcaccgtcaccttccacatcgagcgcggc 83
Query: 362 tccaaccccaactacctggcggtgctggtggagtacgagaacggcgacggcgacgtggtg 421
|||||||| ||||||||||| ||||| || ||||||| ||||||||||||||||| |||
Sbjct: 82 tccaacccaaactacctggccgtgctcgtcgagtacggcaacggcgacggcgacgtcgtg 23
Query: 422 caggtggacctgatggagtcc 442
||||| ||||| |||||||||
Sbjct: 22 caggtcgacctcatggagtcc 2
Score = 159 bits (80), Expect = 5e-037
Identities = 101/108 (93%)
Strand = Plus / Minus
Query: 17 ggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtgcggc 76
||||||||||||||||||||||| ||| | ||||||||||||||||||||||| ||||||
Sbjct: 569 ggcgcgtgcggcttcaagggcgtcaacctcccacctttctcggcgatgacgtcctgcggc 510
Query: 77 aacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccag 124
||||||||| ||||||||||||||||||||||||| || |||||||||
Sbjct: 509 aacgagccactcttcaaggacggcaaaggatgcggctcatgctaccag 462
>gb|CW247382.1|CW247382 104_708_11221754_148_36079_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221754, DNA
sequence
Length = 632
Score = 325 bits (164), Expect = 4e-087
Identities = 227/248 (91%)
Strand = Plus / Minus
Query: 401 aacggcgacggcgacgtggtgcaggtggacctgatggagtccagccccgacgacggcgag 460
||||||||||||||||| |||||| | ||||| ||||||||| || ||||||||||||||
Sbjct: 624 aacggcgacggcgacgtcgtgcagttcgacctcatggagtcccgcaccgacgacggcgag 565
Query: 461 cccaccggcgtctgggagcccatgcgcgagtcctggggctccatatggaggatggacacc 520
||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 564 cccaccggcgtgtgggagcccatgcgcgagtcctggggctccatctggaggatggacacg 505
Query: 521 cgccggccgctgcaagggcccttctcgctgcgcgtcaccaacgagtccggcaagacgctg 580
|| || |||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cgacgcccgctgcagggacccttctcgctgcgcgtcaccaacgagtccggcaagacgctc 445
Query: 581 gtggcggaccaggtcattccggcagactggcagcccgacaacgtctacagctccatcgtc 640
|| || ||||||||||| || || ||||||||||| ||||||||||||||||| ||||||
Sbjct: 444 gtcgccgaccaggtcatcccagccgactggcagccagacaacgtctacagctctatcgtc 385
Query: 641 cagttcga 648
||||||||
Sbjct: 384 cagttcga 377
Score = 48.1 bits (24), Expect = 0.001
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 869 cgagacgtcgcttgtgacgtccgtccagtgca 900
|||||||||||||||| |||||||| ||||||
Sbjct: 43 cgagacgtcgcttgtgccgtccgtcgagtgca 12
>gb|CW020721.1|CW020721 104_109_10409131_114_30493 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10409131, DNA
sequence
Length = 574
Score = 309 bits (156), Expect = 2e-082
Identities = 210/228 (92%)
Strand = Plus / Minus
Query: 122 cagatccggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacg 181
|||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 228 cagatccgttgcaaggcccaccctgcttgctccggcgtgccggagacggtgatcatcacg 169
Query: 182 gacatgaactactacccggtggccccctaccacttcgacctgagcggcactgccttcggg 241
||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 168 gacatgaactactaccccgtggccccctaccacttcgacctcagcggcaccgccttcgga 109
Query: 242 gccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccag 301
|||||||| |||||||| | |||||||||||| | |||||||| |||||||||||||||
Sbjct: 108 gccatggccaaagacgaccgcaacgacgagctgcgccacgcaggcatcatcgacatccag 49
Query: 302 ttcaagagggttccctgccagtaccctggtctgacggtgaccttccac 349
||||||||||||||||||||||||||||| || || || |||||||||
Sbjct: 48 ttcaagagggttccctgccagtaccctggcctcaccgtcaccttccac 1
Score = 159 bits (80), Expect = 5e-037
Identities = 101/108 (93%)
Strand = Plus / Minus
Query: 17 ggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtgcggc 76
||||||||||||||||||||||| ||| | ||||||||||||||||||||||| ||||||
Sbjct: 475 ggcgcgtgcggcttcaagggcgtcaacctcccacctttctcggcgatgacgtcctgcggc 416
Query: 77 aacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccag 124
||||||||| ||||||||||||||||||||||||| || |||||||||
Sbjct: 415 aacgagccactcttcaaggacggcaaaggatgcggctcatgctaccag 368
>gb|CW229431.1|CW229431 104_670_11207297_116_37255_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11207297, DNA
sequence
Length = 678
Score = 232 bits (117), Expect = 5e-059
Identities = 159/173 (91%)
Strand = Plus / Minus
Query: 476 gagcccatgcgcgagtcctggggctccatatggaggatggacacccgccggccgctgcaa 535
||||||||||||||||||||||||||||| |||||||||||||| || || ||||||||
Sbjct: 678 gagcccatgcgcgagtcctggggctccatctggaggatggacacgcgacgcccgctgcag 619
Query: 536 gggcccttctcgctgcgcgtcaccaacgagtccggcaagacgctggtggcggaccaggtc 595
|| ||||||||||||||||||||||||||||||||||||||||| || || |||||||||
Sbjct: 618 ggacccttctcgctgcgcgtcaccaacgagtccggcaagacgctcgtcgccgaccaggtc 559
Query: 596 attccggcagactggcagcccgacaacgtctacagctccatcgtccagttcga 648
|| || || ||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 558 atcccagccgactggcagccagacaacgtctacagctctatcgtccagttcga 506
Score = 48.1 bits (24), Expect = 0.001
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 869 cgagacgtcgcttgtgacgtccgtccagtgca 900
|||||||||||||||| |||||||| ||||||
Sbjct: 172 cgagacgtcgcttgtgccgtccgtcgagtgca 141
>gb|CN146331.1|CN146331 WOUND1_39_D02.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_39_D02_A002 5', mRNA sequence
Length = 816
Score = 212 bits (107), Expect = 4e-053
Identities = 329/403 (81%)
Strand = Plus / Plus
Query: 37 cgtgaacatgccacctttctcggcgatgacgtcgtgcggcaacgagccaatcttcaagga 96
||||||| |||| || |||||||| ||||| ||||||||||||||||| | ||||||||
Sbjct: 254 cgtgaacctgccgccgttctcggcaatgacatcgtgcggcaacgagcccttgttcaagga 313
Query: 97 cggcaaaggatgcgggtcctgctaccagatccggtgcaaggcccaccctgcgtgctccgg 156
|||||| || ||||| |||||||||||||| || ||| | | || ||| ||||||||
Sbjct: 314 cggcaagggctgcggctcctgctaccagatacgatgccaaaacaacgatgcctgctccgg 373
Query: 157 cgtggcggagacggtgatcatcacggacatgaactactacccggtggccccctaccactt 216
| | ||||||||||||||||| ||||||||||||||||| ||| || || |||||
Sbjct: 374 caaccctgagacggtgatcatcactgacatgaactactaccccgtgtccaagtatcactt 433
Query: 217 cgacctgagcggcactgccttcggggccatggcaaaagacgagcacaacgacgagctaag 276
|||||| |||||||| || ||||| |||||||| || || | || ||||||||| |
Sbjct: 434 cgacctcagcggcacggcgttcggcgccatggccaagcccggccgcagcgacgagctccg 493
Query: 277 gcacgcaggaatcatcgacatccagttcaagagggttccctgccagtaccctggtctgac 336
||||| || |||||||||||||||||||||||||| |||||| | ||||| || | ||
Sbjct: 494 ccacgccggcatcatcgacatccagttcaagagggtgccctgcaactaccccgggcagaa 553
Query: 337 ggtgaccttccacatcgagcgcggctccaaccccaactacctggcggtgctggtggagta 396
|||||| |||||| | ||| |||||||||||| |||| | |||||||| || || |
Sbjct: 554 ggtgacgttccacgtggaggagggctccaaccccgtctacttcgcggtgctcgtcgaatt 613
Query: 397 cgagaacggcgacggcgacgtggtgcaggtggacctgatggag 439
||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 614 cgaagacggcgacggcgacgtggtgcaggtggacctcatggag 656
Score = 85.7 bits (43), Expect = 7e-015
Identities = 105/123 (85%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 482 atgcgcgagtcctggggctccatatggaggatggacacccgccggccgctgcaagg-gcc 540
||||||||||||||||| ||||| |||||| ||||| || ||| |||| || | |||
Sbjct: 681 atgcgcgagtcctggggatccatctggaggctggactccggcca-ccgcctcaccgcgcc 739
Query: 541 cttctcgctgcgcgtcaccaacgagtccggcaagacgctggtggcggaccaggtcattcc 600
||||| |||||| |||||||||||||||||||||||||||||||| |||| ||||| ||
Sbjct: 740 gttctccctgcgcatcaccaacgagtccggcaagacgctggtggcgaaccaagtcatccc 799
Query: 601 ggc 603
|||
Sbjct: 800 ggc 802
>gb|CN126677.1|CN126677 RHOH1_18_C01.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_18_C01_A002 5', mRNA sequence
Length = 821
Score = 196 bits (99), Expect = 3e-048
Identities = 342/423 (80%)
Strand = Plus / Plus
Query: 17 ggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtgcggc 76
||||| ||||| |||||| ||||||| |||| || ||||| ||||||||||||||||||
Sbjct: 256 ggcgcctgcgggttcaagaacgtgaacctgccgccgttctccgcgatgacgtcgtgcggc 315
Query: 77 aacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtgcaag 136
|| |||| | ||||| || || || ||||| || |||||||||||||| |||||| ||
Sbjct: 316 aatcagcccctgttcaaagatggaaagggatgtggctcctgctaccagatacggtgccag 375
Query: 137 gcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacatgaactactac 196
|||||||| ||||||||| | ||||||||||||||||| |||||||||||||||
Sbjct: 376 aaacaccctgcctgctccggcaaccccgagacggtgatcatcactgacatgaactactac 435
Query: 197 ccggtggccccctaccacttcgacctgagcggcactgccttcggggccatggcaaaagac 256
|| ||| || || ||||||||||| |||||||| || ||||| |||||||| || |
Sbjct: 436 cccgtgtccaagtatcacttcgacctcagcggcacggcgttcggcgccatggccaagccc 495
Query: 257 gagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaagagggttccc 316
| | |||| ||||||| | ||||| || ||||||||||||||||||||||| || |||
Sbjct: 496 ggccgcaacaacgagctccgccacgccggcatcatcgacatccagttcaagagagtgccc 555
Query: 317 tgccagtaccctggtctgacggtgaccttccacatcgagcgcggctccaaccccaactac 376
||| | ||||| || | || |||||| |||||| | ||| ||||| ||||| ||||
Sbjct: 556 tgcaactacccggggcagaaggtgacgttccacgtggaggagggctcgaacccggtctac 615
Query: 377 ctggcggtgctggtggagtacgagaacggcgacggcgacgtggtgcaggtggacctgatg 436
| |||||||| || |||| ||| ||||||||||||||||||||||||||||| | |||
Sbjct: 616 ttcgcggtgctcgtcgagttcgaagacggcgacggcgacgtggtgcaggtggacatcatg 675
Query: 437 gag 439
|||
Sbjct: 676 gag 678
Score = 73.8 bits (37), Expect = 3e-011
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 482 atgcgcgagtcctggggctccatatggaggatggacacccgccggccgctgcaagggccc 541
|||||||||||||| || ||||| |||||| ||||| || || |||||| | ||||
Sbjct: 703 atgcgcgagtcctgnggatccatctggaggctggacgccaaccataggctgcaggcgccc 762
Query: 542 ttctcgctgcgcgtcaccaacgagtccggcaagacgctggtggc 585
|||||||||||| |||| ||||||||||||| || |||||||||
Sbjct: 763 ttctcgctgcgcatcacaaacgagtccggcaggaagctggtggc 806
>gb|CN129456.1|CN129456 RHOH1_35_B11.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_35_B11_A002 5', mRNA sequence
Length = 836
Score = 196 bits (99), Expect = 3e-048
Identities = 342/423 (80%)
Strand = Plus / Plus
Query: 17 ggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtgcggc 76
||||| ||||| |||||| ||||||| |||| || ||||| ||||||||||||||||||
Sbjct: 260 ggcgcctgcgggttcaagaacgtgaacctgccgccgttctccgcgatgacgtcgtgcggc 319
Query: 77 aacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtgcaag 136
|| |||| | ||||| || || || ||||| || |||||||||||||| |||||| ||
Sbjct: 320 aatcagcccctgttcaaagatggaaagggatgtggctcctgctaccagatacggtgccag 379
Query: 137 gcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacatgaactactac 196
|||||||| ||||||||| | ||||||||||||||||| |||||||||||||||
Sbjct: 380 aaacaccctgcctgctccggcaaccccgagacggtgatcatcactgacatgaactactac 439
Query: 197 ccggtggccccctaccacttcgacctgagcggcactgccttcggggccatggcaaaagac 256
|| ||| || || ||||||||||| |||||||| || ||||| |||||||| || |
Sbjct: 440 cccgtgtccaagtatcacttcgacctcagcggcacggcgttcggcgccatggccaagccc 499
Query: 257 gagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaagagggttccc 316
| | |||| ||||||| | ||||| || ||||||||||||||||||||||| || |||
Sbjct: 500 ggccgcaacaacgagctccgccacgccggcatcatcgacatccagttcaagagagtgccc 559
Query: 317 tgccagtaccctggtctgacggtgaccttccacatcgagcgcggctccaaccccaactac 376
||| | ||||| || | || |||||| |||||| | ||| ||||| ||||| ||||
Sbjct: 560 tgcaactacccggggcagaaggtgacgttccacgtggaggagggctcgaacccggtctac 619
Query: 377 ctggcggtgctggtggagtacgagaacggcgacggcgacgtggtgcaggtggacctgatg 436
| |||||||| || |||| ||| ||||||||||||||||||||||||||||| | |||
Sbjct: 620 ttcgcggtgctcgtcgagttcgaagacggcgacggcgacgtggtgcaggtggacatcatg 679
Query: 437 gag 439
|||
Sbjct: 680 gag 682
Score = 79.8 bits (40), Expect = 4e-013
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 482 atgcgcgagtcctggggctccatatggaggatggacacccgccggccgctgcaagggccc 541
||||||||||||||||| ||||| |||||| ||||| || || |||||| | ||||
Sbjct: 707 atgcgcgagtcctggggatccatctggaggctggacgccaaccataggctgcaggcgccc 766
Query: 542 ttctcgctgcgcgtcaccaacgagtccggcaagacgctggtggc 585
|||||||||||| |||| ||||||||||||| || |||||||||
Sbjct: 767 ttctcgctgcgcatcacaaacgagtccggcaggaagctggtggc 810
>gb|CN131258.1|CN131258 RHOH1_46_G08.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_46_G08_A002 5', mRNA sequence
Length = 889
Score = 196 bits (99), Expect = 3e-048
Identities = 342/423 (80%)
Strand = Plus / Plus
Query: 17 ggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtgcggc 76
||||| ||||| |||||| ||||||| |||| || ||||| ||||||||||||||||||
Sbjct: 259 ggcgcctgcgggttcaagaacgtgaacctgccgccgttctccgcgatgacgtcgtgcggc 318
Query: 77 aacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtgcaag 136
|| |||| | ||||| || || || ||||| || |||||||||||||| |||||| ||
Sbjct: 319 aatcagcccctgttcaaagatggaaagggatgtggctcctgctaccagatacggtgccag 378
Query: 137 gcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacatgaactactac 196
|||||||| ||||||||| | ||||||||||||||||| |||||||||||||||
Sbjct: 379 aaacaccctgcctgctccggcaaccccgagacggtgatcatcactgacatgaactactac 438
Query: 197 ccggtggccccctaccacttcgacctgagcggcactgccttcggggccatggcaaaagac 256
|| ||| || || ||||||||||| |||||||| || ||||| |||||||| || |
Sbjct: 439 cccgtgtccaagtatcacttcgacctcagcggcacggcgttcggcgccatggccaagccc 498
Query: 257 gagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaagagggttccc 316
| | |||| ||||||| | ||||| || ||||||||||||||||||||||| || |||
Sbjct: 499 ggccgcaacaacgagctccgccacgccggcatcatcgacatccagttcaagagagtgccc 558
Query: 317 tgccagtaccctggtctgacggtgaccttccacatcgagcgcggctccaaccccaactac 376
||| | ||||| || | || |||||| |||||| | ||| ||||| ||||| ||||
Sbjct: 559 tgcaactacccggggcagaaggtgacgttccacgtggaggagggctcgaacccggtctac 618
Query: 377 ctggcggtgctggtggagtacgagaacggcgacggcgacgtggtgcaggtggacctgatg 436
| |||||||| || |||| ||| ||||||||||||||||||||||||||||| | |||
Sbjct: 619 ttcgcggtgctcgtcgagttcgaagacggcgacggcgacgtggtgcaggtggacatcatg 678
Query: 437 gag 439
|||
Sbjct: 679 gag 681
Score = 73.8 bits (37), Expect = 3e-011
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 482 atgcgcgagtcctggggctccatatggaggatggacacccgccggccgctgcaagggccc 541
|||||||||||||| || ||||| |||||| ||||| || || |||||| | ||||
Sbjct: 706 atgcgcgagtcctgnggatccatctggaggctggacgccaaccataggctgcaggcgccc 765
Query: 542 ttctcgctgcgcgtcaccaacgagtccggcaagacgctggtggc 585
|||||||||||| |||| ||||||||||||| || |||||||||
Sbjct: 766 ttctcgctgcgcatcacaaacgagtccggcaggaagctggtggc 809
>gb|CN150200.1|CN150200 WOUND1_67_D03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_67_D03_A002 5', mRNA sequence
Length = 750
Score = 196 bits (99), Expect = 3e-048
Identities = 327/403 (81%)
Strand = Plus / Plus
Query: 37 cgtgaacatgccacctttctcggcgatgacgtcgtgcggcaacgagccaatcttcaagga 96
||||||| |||| || |||||||| ||||| ||||||||||||||||| | ||||||||
Sbjct: 267 cgtgaacctgccgccgttctcggcaatgacatcgtgcggcaacgagcccttgttcaagga 326
Query: 97 cggcaaaggatgcgggtcctgctaccagatccggtgcaaggcccaccctgcgtgctccgg 156
|||||| || ||||| |||||||||||||| || ||| | | || ||| ||||||||
Sbjct: 327 cggcaagggctgcggctcctgctaccagatacgatgccaaaacaacgatgcctgctccgg 386
Query: 157 cgtggcggagacggtgatcatcacggacatgaactactacccggtggccccctaccactt 216
| | ||||||||||||||||| ||||||||||||||||| ||| || || |||||
Sbjct: 387 caaccctgagacggtgatcatcactgacatgaactactaccccgtgtccaagtatcactt 446
Query: 217 cgacctgagcggcactgccttcggggccatggcaaaagacgagcacaacgacgagctaag 276
|||||| |||||||| || ||||| |||||||| || || | || ||||||||| |
Sbjct: 447 cgacctcagcggcacggcgttcggcgccatggccaagcccggccgcagcgacgagctccg 506
Query: 277 gcacgcaggaatcatcgacatccagttcaagagggttccctgccagtaccctggtctgac 336
||||| || |||||||||||||||||||||||||| |||||| | ||||| || | ||
Sbjct: 507 ccacgccggcatcatcgacatccagttcaagagggtgccctgcaactaccccgggcagaa 566
Query: 337 ggtgaccttccacatcgagcgcggctccaaccccaactacctggcggtgctggtggagta 396
|||||| |||||| | ||| |||||||||||| |||| | |||||||| || || |
Sbjct: 567 ggtgacgttccacgtggaggagggctccaaccccgtctacttcgcggtgctcgtcgaatt 626
Query: 397 cgagaacggcgacggcgacgtggtgcaggtggacctgatggag 439
| | |||||||||||||||||||||| |||||||| ||||||
Sbjct: 627 caaagacggcgacggcgacgtggtgcatgtggacctcatggag 669
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 482 atgcgcgagtcctggggctccatatggaggatggac 517
||||||||||||||||| ||||| |||||| |||||
Sbjct: 694 atgcgcgagtcctggggatccatctggaggctggac 729
>gb|CX606202.1|CX606202 ANR1_1_E07.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_1_E07_A002 5', mRNA sequence
Length = 736
Score = 196 bits (99), Expect = 3e-048
Identities = 342/423 (80%)
Strand = Plus / Plus
Query: 17 ggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtgcggc 76
||||| ||||| |||||| ||||||| |||| || ||||| ||||||||||||||||||
Sbjct: 253 ggcgcctgcgggttcaagaacgtgaacctgccgccgttctccgcgatgacgtcgtgcggc 312
Query: 77 aacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtgcaag 136
|| |||| | ||||| || || || ||||| || |||||||||||||| |||||| ||
Sbjct: 313 aatcagcccctgttcaaagatggaaagggatgtggctcctgctaccagatacggtgccag 372
Query: 137 gcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacatgaactactac 196
|||||||| ||||||||| | ||||||||||||||||| |||||||||||||||
Sbjct: 373 aaacaccctgcctgctccggcaaccccgagacggtgatcatcactgacatgaactactac 432
Query: 197 ccggtggccccctaccacttcgacctgagcggcactgccttcggggccatggcaaaagac 256
|| ||| || || ||||||||||| |||||||| || ||||| |||||||| || |
Sbjct: 433 cccgtgtccaagtatcacttcgacctcagcggcacggcgttcggcgccatggccaagccc 492
Query: 257 gagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaagagggttccc 316
| | |||| ||||||| | ||||| || ||||||||||||||||||||||| || |||
Sbjct: 493 ggccgcaacaacgagctccgccacgccggcatcatcgacatccagttcaagagagtgccc 552
Query: 317 tgccagtaccctggtctgacggtgaccttccacatcgagcgcggctccaaccccaactac 376
||| | ||||| || | || |||||| |||||| | ||| ||||| ||||| ||||
Sbjct: 553 tgcaactacccggggcagaaggtgacgttccacgtggaggagggctcgaacccggtctac 612
Query: 377 ctggcggtgctggtggagtacgagaacggcgacggcgacgtggtgcaggtggacctgatg 436
| |||||||| || |||| ||| ||||||||||||||||||||||||||||| | |||
Sbjct: 613 ttcgcggtgctcgtcgagttcgaagacggcgacggcgacgtggtgcaggtggacatcatg 672
Query: 437 gag 439
|||
Sbjct: 673 gag 675
Score = 42.1 bits (21), Expect = 0.088
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 482 atgcgcgagtcctggggctccatatggaggatggac 517
|||||||||||||| || ||||| |||||| |||||
Sbjct: 700 atgcgcgagtcctgnggatccatctggaggctggac 735
>gb|CX609949.1|CX609949 ANR1_15_F01.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_15_F01_A002 5', mRNA sequence
Length = 771
Score = 196 bits (99), Expect = 3e-048
Identities = 342/423 (80%)
Strand = Plus / Plus
Query: 17 ggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtgcggc 76
||||| ||||| |||||| ||||||| |||| || ||||| ||||||||||||||||||
Sbjct: 260 ggcgcctgcgggttcaagaacgtgaacctgccgccgttctccgcgatgacgtcgtgcggc 319
Query: 77 aacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtgcaag 136
|| |||| | ||||| || || || ||||| || |||||||||||||| |||||| ||
Sbjct: 320 aatcagcccctgttcaaagatggaaagggatgtggctcctgctaccagatacggtgccag 379
Query: 137 gcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacatgaactactac 196
|||||||| ||||||||| | ||||||||||||||||| |||||||||||||||
Sbjct: 380 aaacaccctgcctgctccggcaaccccgagacggtgatcatcactgacatgaactactac 439
Query: 197 ccggtggccccctaccacttcgacctgagcggcactgccttcggggccatggcaaaagac 256
|| ||| || || ||||||||||| |||||||| || ||||| |||||||| || |
Sbjct: 440 cccgtgtccaagtatcacttcgacctcagcggcacggcgttcggcgccatggccaagccc 499
Query: 257 gagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaagagggttccc 316
| | |||| ||||||| | ||||| || ||||||||||||||||||||||| || |||
Sbjct: 500 ggccgcaacaacgagctccgccacgccggcatcatcgacatccagttcaagagagtgccc 559
Query: 317 tgccagtaccctggtctgacggtgaccttccacatcgagcgcggctccaaccccaactac 376
||| | ||||| || | || |||||| |||||| | ||| ||||| ||||| ||||
Sbjct: 560 tgcaactacccggggcagaaggtgacgttccacgtggaggagggctcgaacccggtctac 619
Query: 377 ctggcggtgctggtggagtacgagaacggcgacggcgacgtggtgcaggtggacctgatg 436
| |||||||| || |||| ||| ||||||||||||||||||||||||||||| | |||
Sbjct: 620 ttcgcggtgctcgtcgagttcgaagacggcgacggcgacgtggtgcaggtggacatcatg 679
Query: 437 gag 439
|||
Sbjct: 680 gag 682
Score = 40.1 bits (20), Expect = 0.35
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 482 atgcgcgagtcctggggctccatatggaggatggac 517
|||||||||||||| || ||||| |||||| |||||
Sbjct: 707 atgcgcgagtcctgcggatccatctggaggctggac 742
>gb|CN141913.1|CN141913 WOUND1_2_E01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_2_E01_A002 5', mRNA sequence
Length = 680
Score = 190 bits (96), Expect = 2e-046
Identities = 322/396 (81%), Gaps = 1/396 (0%)
Strand = Plus / Plus
Query: 37 cgtgaacatgccacctttctcggcgatgacgtcgtgcggcaacgagccaatcttcaagga 96
||||||| |||| || |||||||| ||||| ||||||||||||||||| | ||||||||
Sbjct: 285 cgtgaacctgccgccgttctcggcaatgacatcgtgcggcaacgagcccttgttcaagga 344
Query: 97 cggcaaaggatgcgggtcctgctaccagatccggtgcaaggcccaccctgcgtgctccgg 156
|||||| || ||||| |||||||||||||| || ||| | | || ||| ||||||||
Sbjct: 345 cggcaagggctgcggctcctgctaccagatacgatgccaaaacaacgatgcctgctccgg 404
Query: 157 cgtggcggagacggtgatcatcacggacatgaactactacccggtggccccctaccactt 216
| | ||||||||||||||||| ||||||||||||||||| ||| || || |||||
Sbjct: 405 caaccctgagacggtgatcatcactgacatgaactactaccccgtgtccaagtatcactt 464
Query: 217 cgacctgagcggcactgccttcggggccatggcaaaagacgagcacaacgacgagctaag 276
|||||| |||||||| || ||||| |||||||| || || | || ||||||||| |
Sbjct: 465 cgacctcagcggcacggcgttcggcgccatggccaagcccggccgcagcgacgagctccg 524
Query: 277 gcacgcaggaatcatcgacatccagttcaagagggttccctgccagtaccctggtctgac 336
||||| || |||||||||||||||||||||||||| |||||| | ||||| || | ||
Sbjct: 525 ccacgccggcatcatcgacatccagttcaagagggtgccctgcaactaccccgggcagaa 584
Query: 337 ggtgaccttccac-atcgagcgcggctccaaccccaactacctggcggtgctggtggagt 395
|||||| |||||| || ||| |||||||||||| |||| | |||||||| || || |
Sbjct: 585 ggtgacgttccacgatggaggagggctccaaccccgtctacttcgcggtgctcgtcgaat 644
Query: 396 acgagaacggcgacggcgacgtggtgcaggtggacc 431
||| |||||||||||||||||||||| |||||||
Sbjct: 645 tcgaagacggcgacggcgacgtggtgcaagtggacc 680
>gb|CN144039.1|CN144039 WOUND1_19_G06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_19_G06_A002 5', mRNA sequence
Length = 677
Score = 190 bits (96), Expect = 2e-046
Identities = 303/372 (81%)
Strand = Plus / Plus
Query: 68 tcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatc 127
||||||||||||||||| | |||||||||||||| || ||||| ||||||||||||||
Sbjct: 124 tcgtgcggcaacgagcccttgttcaaggacggcaagggctgcggctcctgctaccagata 183
Query: 128 cggtgcaaggcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacatg 187
|| ||| | | || ||| ||||||||| | ||||||||||||||||| ||||||
Sbjct: 184 cgatgccaaaacaacgatgcctgctccggcaaccctgagacggtgatcatcactgacatg 243
Query: 188 aactactacccggtggccccctaccacttcgacctgagcggcactgccttcggggccatg 247
||||||||||| ||| || || ||||||||||| |||||||| || ||||| ||||||
Sbjct: 244 aactactaccccgtgtccaagtatcacttcgacctcagcggcacggcgttcggcgccatg 303
Query: 248 gcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaag 307
|| || || | || ||||||||| | ||||| || |||||||||||||||||||||
Sbjct: 304 gccaagcccggccgcagcgacgagctccgccacgccggcatcatcgacatccagttcaag 363
Query: 308 agggttccctgccagtaccctggtctgacggtgaccttccacatcgagcgcggctccaac 367
||||| |||||| | ||||| || | || |||||| |||||| | ||| |||||||||
Sbjct: 364 agggtgccctgcaactaccccgggcagaaggtgacgttccacgtggaggagggctccaac 423
Query: 368 cccaactacctggcggtgctggtggagtacgagaacggcgacggcgacgtggtgcaggtg 427
||| |||| | |||||||| || || | ||| ||||||||||||||||||||||||||
Sbjct: 424 cccgtctacttcgcggtgctcgtcgaattcgaagacggcgacggcgacgtggtgcaggtg 483
Query: 428 gacctgatggag 439
||||| ||||||
Sbjct: 484 gacctcatggag 495
Score = 85.7 bits (43), Expect = 7e-015
Identities = 105/123 (85%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 482 atgcgcgagtcctggggctccatatggaggatggacacccgccggccgctgcaagg-gcc 540
||||||||||||||||| ||||| |||||| ||||| || ||| |||| || | |||
Sbjct: 520 atgcgcgagtcctggggatccatctggaggctggactccggcca-ccgcctcaccgcgcc 578
Query: 541 cttctcgctgcgcgtcaccaacgagtccggcaagacgctggtggcggaccaggtcattcc 600
||||| |||||| |||||||||||||||||||||||||||||||| |||| ||||| ||
Sbjct: 579 gttctccctgcgcatcaccaacgagtccggcaagacgctggtggcgaaccaagtcatccc 638
Query: 601 ggc 603
|||
Sbjct: 639 ggc 641
>gb|CX610446.1|CX610446 ANR1_18_F11.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_18_F11_A002 5', mRNA sequence
Length = 743
Score = 188 bits (95), Expect = 6e-046
Identities = 341/423 (80%)
Strand = Plus / Plus
Query: 17 ggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtgcggc 76
||||| ||||| |||||| ||||||| |||| || ||||| ||||||||||||||||||
Sbjct: 254 ggcgcctgcgggttcaagaacgtgaacctgccgccgttctccgcgatgacgtcgtgcggc 313
Query: 77 aacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtgcaag 136
|| |||| | ||||| || || || ||||| || |||||||||||||| |||||| ||
Sbjct: 314 aatcagcccctgttcaaagatggaaagggatgtggctcctgctaccagatacggtgccag 373
Query: 137 gcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacatgaactactac 196
|||||||| ||||||||| | ||||||||||||||||| |||||||||||||||
Sbjct: 374 aaacaccctgcctgctccggcaaccccgagacggtgatcatcactgacatgaactactac 433
Query: 197 ccggtggccccctaccacttcgacctgagcggcactgccttcggggccatggcaaaagac 256
|| ||| || || ||||||||||| |||||||| || ||||| |||||||| || |
Sbjct: 434 cccgtgtccaagtatcacttcgacctcagcggcacggcgttcggcgccatggccaagccc 493
Query: 257 gagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaagagggttccc 316
| | |||| ||||||| | ||||| || ||||||||||||||||||||||| || |||
Sbjct: 494 ggccgcaacaacgagctccgccacgccggcatcatcgacatccagttcaagagagtgccc 553
Query: 317 tgccagtaccctggtctgacggtgaccttccacatcgagcgcggctccaaccccaactac 376
||| | ||||| || | || |||||| |||||| | ||| ||||| ||||| ||||
Sbjct: 554 tgcaactacccggggcagaaggtgacgttccacgtggaggagggctcgaacccggtctac 613
Query: 377 ctggcggtgctggtggagtacgagaacggcgacggcgacgtggtgcaggtggacctgatg 436
| |||||||| || |||| ||| |||||||| |||||||||||||||||||| | |||
Sbjct: 614 ttcgcggtgctcgtcgagttcgaagacggcgactgcgacgtggtgcaggtggacatcatg 673
Query: 437 gag 439
|||
Sbjct: 674 gag 676
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 482 atgcgcgagtcctggggctccatatggaggatggac 517
||||||||||||||||| ||||| |||||| |||||
Sbjct: 701 atgcgcgagtcctggggatccatctggaggctggac 736
>gb|BM323374.1|BM323374 PIC1_18_E10.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 557
Score = 180 bits (91), Expect = 1e-043
Identities = 235/283 (83%)
Strand = Plus / Plus
Query: 37 cgtgaacatgccacctttctcggcgatgacgtcgtgcggcaacgagccaatcttcaagga 96
||||||| |||| || |||||||| ||||| ||||||||||||||||| | ||||||||
Sbjct: 268 cgtgaacctgccgccgttctcggcaatgacatcgtgcggcaacgagcccctgttcaagga 327
Query: 97 cggcaaaggatgcgggtcctgctaccagatccggtgcaaggcccaccctgcgtgctccgg 156
| |||| || ||||| |||||||||||||| || ||| | |||||||| ||||| ||
Sbjct: 328 cagcaagggctgcggctcctgctaccagatacgatgccaacagcaccctgcctgctcggg 387
Query: 157 cgtggcggagacggtgatcatcacggacatgaactactacccggtggccccctaccactt 216
| | ||||||||||||||||| ||||||||||||||||| |||||| ||||||||
Sbjct: 388 caacccagagacggtgatcatcactgacatgaactactaccccgtggccaagtaccactt 447
Query: 217 cgacctgagcggcactgccttcggggccatggcaaaagacgagcacaacgacgagctaag 276
|||||| |||||||| || ||||| |||||||| || || | |||||||||||| |
Sbjct: 448 cgacctcagcggcacggcgttcggcgccatggccaagcccggccgcaacgacgagctccg 507
Query: 277 gcacgcaggaatcatcgacatccagttcaagagggttccctgc 319
||||| || |||||||||||||||||||||||||| ||||||
Sbjct: 508 ccacgctggcatcatcgacatccagttcaagagggtgccctgc 550
>gb|CN127679.1|CN127679 RHOH1_24_A06.g3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_24_A06_A002 5', mRNA sequence
Length = 816
Score = 180 bits (91), Expect = 1e-043
Identities = 313/384 (81%), Gaps = 6/384 (1%)
Strand = Plus / Plus
Query: 53 ttctcggcgatgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcggg 112
|||||| | ||||||||||| ||||||||||| ||||||||||||||||| || |||||
Sbjct: 333 ttctcgtccatgacgtcgtgtggcaacgagcccatcttcaaggacggcaagggctgcggc 392
Query: 113 tcctgctaccagatccggtgc---aag-gc--ccaccctgcgtgctccggcgtggcggag 166
|| ||||| ||||| |||||| ||| || |||||| || |||||||||||| || ||
Sbjct: 393 tcatgctatcagatacggtgccttaagagcaaccacccggcctgctccggcgtgccgcag 452
Query: 167 acggtgatcatcacggacatgaactactacccggtggccccctaccacttcgacctgagc 226
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 453 acggtgatcatcacggacatgaactactacccggttgccaagtaccacttcgacctgagc 512
Query: 227 ggcactgccttcggggccatggcaaaagacgagcacaacgacgagctaaggcacgcagga 286
||||| || ||||| |||||||| | | | ||||||| |||| ||||||| ||
Sbjct: 513 ggcacggcgttcggcgccatggcgagctggggcctcaacgacaagctccggcacgccggg 572
Query: 287 atcatcgacatccagttcaagagggttccctgccagtaccctggtctgacggtgaccttc 346
||||||||||| ||||||| |||||| || ||| | | ||| || ||||| | ||||||
Sbjct: 573 atcatcgacatgcagttcaggagggtgccgtgcaacttcccgggcctgaccatcaccttc 632
Query: 347 cacatcgagcgcggctccaaccccaactacctggcggtgctggtggagtacgagaacggc 406
| | | ||| ||| |||||||||| ||||| || ||||| | ||| ||||||||
Sbjct: 633 cgcgtgcagcacgggtccaaccccatgtacctcgccgtgctcatcgagcacgagaaccag 692
Query: 407 gacggcgacgtggtgcaggtggac 430
||||||||||||||||||| ||||
Sbjct: 693 gacggcgacgtggtgcaggcggac 716
Score = 60.0 bits (30), Expect = 4e-007
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 472 ctgggagcccatgcgcgagtcctggggctccatatggaggat 513
|||||||||||||| |||||||||||| ||||| ||||||||
Sbjct: 740 ctgggagcccatgcacgagtcctggggatccatctggaggat 781
>gb|CN129996.1|CN129996 RHOH1_38_E01.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_38_E01_A002 5', mRNA sequence
Length = 714
Score = 180 bits (91), Expect = 1e-043
Identities = 340/423 (80%)
Strand = Plus / Plus
Query: 17 ggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtgcggc 76
||||| ||||| |||||| ||||||| |||| || ||||| ||||||||||||||||||
Sbjct: 241 ggcgcctgcgggttcaagaacgtgaacctgccgccgttctccgcgatgacgtcgtgcggc 300
Query: 77 aacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtgcaag 136
|| |||| | ||||| || || || ||||| || |||||||||||||| |||||| ||
Sbjct: 301 aatcagcccctgttcaaagatggaaagggatgtggctcctgctaccagatacggtgccag 360
Query: 137 gcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacatgaactactac 196
|||||||| ||||||||| | ||||||||||||||||| |||||||||||||||
Sbjct: 361 aaacaccctgcctgctccggcaaccccgagacggtgatcatcactgacatgaactactac 420
Query: 197 ccggtggccccctaccacttcgacctgagcggcactgccttcggggccatggcaaaagac 256
|| ||| || || ||||||||||| |||||||| || ||||| |||||||| || |
Sbjct: 421 cccgtgtccaagtatcacttcgacctcagcggcacggcgttcggcgccatggccaagccc 480
Query: 257 gagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaagagggttccc 316
| | |||| ||||||| | ||||| || ||||||||||||||||||||||| || |||
Sbjct: 481 ggccgcaacaacgagctccgccacgccggcatcatcgacatccagttcaagagagtgccc 540
Query: 317 tgccagtaccctggtctgacggtgaccttccacatcgagcgcggctccaaccccaactac 376
||| | ||||| || | || |||||| |||||| | ||| ||||| ||||| ||||
Sbjct: 541 tgcaactacccggggcagaaggtgacgttccacgtggaggagggctcgaacccggtctac 600
Query: 377 ctggcggtgctggtggagtacgagaacggcgacggcgacgtggtgcaggtggacctgatg 436
| |||||||| || |||| ||| |||||||| ||||| |||||||||||||| | |||
Sbjct: 601 ttcgcggtgctcgtcgagttcgaagacggcgacagcgacttggtgcaggtggacatcatg 660
Query: 437 gag 439
|||
Sbjct: 661 gag 663
>gb|CX616412.1|CX616412 GABR1_27_F04.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_27_F04_A002 5', mRNA sequence
Length = 811
Score = 180 bits (91), Expect = 1e-043
Identities = 313/384 (81%), Gaps = 6/384 (1%)
Strand = Plus / Plus
Query: 53 ttctcggcgatgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcggg 112
|||||| | ||||||||||| ||||||||||| ||||||||||||||||| || |||||
Sbjct: 320 ttctcgtccatgacgtcgtgtggcaacgagcccatcttcaaggacggcaagggctgcggc 379
Query: 113 tcctgctaccagatccggtgc---aag-gc--ccaccctgcgtgctccggcgtggcggag 166
|| ||||| ||||| |||||| ||| || |||||| || |||||||||||| || ||
Sbjct: 380 tcatgctatcagatacggtgccttaagagcaaccacccggcctgctccggcgtgccgcag 439
Query: 167 acggtgatcatcacggacatgaactactacccggtggccccctaccacttcgacctgagc 226
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 440 acggtgatcatcacggacatgaactactacccggttgccaagtaccacttcgacctgagc 499
Query: 227 ggcactgccttcggggccatggcaaaagacgagcacaacgacgagctaaggcacgcagga 286
||||| || ||||| |||||||| | | | ||||||| |||| ||||||| ||
Sbjct: 500 ggcacggcgttcggcgccatggcgagctggggcctcaacgacaagctccggcacgccggg 559
Query: 287 atcatcgacatccagttcaagagggttccctgccagtaccctggtctgacggtgaccttc 346
||||||||||| ||||||| |||||| || ||| | | ||| || ||||| | ||||||
Sbjct: 560 atcatcgacatgcagttcaggagggtgccgtgcaacttcccgggcctgaccatcaccttc 619
Query: 347 cacatcgagcgcggctccaaccccaactacctggcggtgctggtggagtacgagaacggc 406
| | | ||| ||| |||||||||| ||||| || ||||| | ||| ||||||||
Sbjct: 620 cgcgtgcagcacgggtccaaccccatgtacctcgccgtgctcatcgagcacgagaaccag 679
Query: 407 gacggcgacgtggtgcaggtggac 430
||||||||||||||||||| ||||
Sbjct: 680 gacggcgacgtggtgcaggcggac 703
Score = 60.0 bits (30), Expect = 4e-007
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 472 ctgggagcccatgcgcgagtcctggggctccatatggaggat 513
|||||||||||||| |||||||||||| ||||| ||||||||
Sbjct: 727 ctgggagcccatgcacgagtcctggggatccatctggaggat 768
>gb|BI245881.1|BI245881 IP1_64_F11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 587
Score = 178 bits (90), Expect = 6e-043
Identities = 243/294 (82%)
Strand = Plus / Plus
Query: 37 cgtgaacatgccacctttctcggcgatgacgtcgtgcggcaacgagccaatcttcaagga 96
||||||| |||| || ||||| |||||||||||||| |||||||||||| | ||||||||
Sbjct: 283 cgtgaacctgcctccgttctccgcgatgacgtcgtgtggcaacgagccactgttcaagga 342
Query: 97 cggcaaaggatgcgggtcctgctaccagatccggtgcaaggcccaccctgcgtgctccgg 156
|||||| || ||||| || |||||||||||||| ||| | |||| |||| ||||||||
Sbjct: 343 cggcaagggctgcggctcatgctaccagatccgatgccaaaaccacgctgcatgctccgg 402
Query: 157 cgtggcggagacggtgatcatcacggacatgaactactacccggtggccccctaccactt 216
| ||||||||||||||||||| |||||||||||||| ||||| || ||||||||
Sbjct: 403 caacccggagacggtgatcatcaccgacatgaactactatccggtcgctaagtaccactt 462
Query: 217 cgacctgagcggcactgccttcggggccatggcaaaagacgagcacaacgacgagctaag 276
|||||| |||||||| || ||||| |||||||| ||| | | || ||| ||||| |
Sbjct: 463 cgacctcagcggcacggcgttcggcgccatggctaaacctggccgcagcgatgagctccg 522
Query: 277 gcacgcaggaatcatcgacatccagttcaagagggttccctgccagtaccctgg 330
||||| || ||||||||||||||||||||||| || |||||| | ||||||||
Sbjct: 523 ccacgccggcatcatcgacatccagttcaagagagtgccctgcaattaccctgg 576
>gb|BQ479087.1|BQ479087 pRC-1199 pRC Sorghum halepense cDNA 5', mRNA sequence
Length = 834
Score = 174 bits (88), Expect = 9e-042
Identities = 229/276 (82%)
Strand = Plus / Plus
Query: 164 gagacggtgatcatcacggacatgaactactacccggtggccccctaccacttcgacctg 223
||||||||||||||||| ||||||||||||||||| ||| || || |||||||||||
Sbjct: 49 gagacggtgatcatcactgacatgaactactaccccgtgtccaagtatcacttcgacctc 108
Query: 224 agcggcactgccttcggggccatggcaaaagacgagcacaacgacgagctaaggcacgca 283
|||||||| || ||||| |||||||| || || | || ||||||||| | |||||
Sbjct: 109 agcggcacggcgttcggcgccatggccaagcccggccgcagcgacgagctccgccacgcc 168
Query: 284 ggaatcatcgacatccagttcaagagggttccctgccagtaccctggtctgacggtgacc 343
|| |||||||||||||||||||||||||| |||||| | ||||| || | || ||||||
Sbjct: 169 ggcatcatcgacatccagttcaagagggtgccctgcaactaccccgggcagaaggtgacg 228
Query: 344 ttccacatcgagcgcggctccaaccccaactacctggcggtgctggtggagtacgagaac 403
|||||| | ||| |||||||||||| |||| | |||||||| || |||| ||| ||
Sbjct: 229 ttccacgtggaggagggctccaaccccgtctacttcgcggtgctcgtcgagttcgaagac 288
Query: 404 ggcgacggcgacgtggtgcaggtggacctgatggag 439
||||||||||||||||||||||||||||| ||||||
Sbjct: 289 ggcgacggcgacgtggtgcaggtggacctcatggag 324
Score = 87.7 bits (44), Expect = 2e-015
Identities = 136/164 (82%), Gaps = 2/164 (1%)
Strand = Plus / Plus
Query: 482 atgcgcgagtcctggggctccatatggaggatggacacccgccggccgctgcaagg-gcc 540
||||||||||||||||| ||||| |||||| ||||| || ||| |||| || | |||
Sbjct: 349 atgcgcgagtcctggggatccatctggaggctggactccggcca-ccgcctcaccgcgcc 407
Query: 541 cttctcgctgcgcgtcaccaacgagtccggcaagacgctggtggcggaccaggtcattcc 600
||||| |||||| |||||||||||||||||||||||||||||||| |||| ||||| ||
Sbjct: 408 gttctccctgcgcatcaccaacgagtccggcaagacgctggtggcgaaccaagtcatccc 467
Query: 601 ggcagactggcagcccgacaacgtctacagctccatcgtccagt 644
||| ||||| |||| ||| | |||| | |||||||||||||
Sbjct: 468 ggccaactgggtgcccaacacctactaccgttccatcgtccagt 511
>gb|CD463948.1|CD463948 ETH1_47_B11.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_47_B11_A002 5', mRNA sequence
Length = 763
Score = 174 bits (88), Expect = 9e-042
Identities = 200/236 (84%), Gaps = 6/236 (2%)
Strand = Plus / Plus
Query: 20 gcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtgcggcaac 79
|||||||| |||||||||| |||| | || |||||| | ||||||||||| ||||||
Sbjct: 303 gcgtgcgggttcaagggcgcgaaccagtacccgttctcgtccatgacgtcgtgtggcaac 362
Query: 80 gagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtgc---aag 136
||||| ||||||||||||||||| || ||||| || ||||| ||||| |||||| |||
Sbjct: 363 gagcccatcttcaaggacggcaagggctgcggctcatgctatcagatacggtgccttaag 422
Query: 137 ---gcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacatgaactac 193
| |||||| || |||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 423 agcgaccacccggcctgctccggcgtgccgcagacggtgatcatcacggacatgaactac 482
Query: 194 tacccggtggccccctaccacttcgacctgagcggcactgccttcggggccatggc 249
|||||||| ||| ||||||||||||||||||||||| || ||||| ||||||||
Sbjct: 483 tacccggttgccaagtaccacttcgacctgagcggcacggcgttcggcgccatggc 538
Score = 42.1 bits (21), Expect = 0.088
Identities = 57/69 (82%)
Strand = Plus / Plus
Query: 362 tccaaccccaactacctggcggtgctggtggagtacgagaacggcgacggcgacgtggtg 421
|||||||||| ||||| || ||||| | ||| |||||||| |||||||||||||||
Sbjct: 655 tccaaccccatgtacctcgccgtgctcatcgagcacgagaaccaggacggcgacgtggtg 714
Query: 422 caggtggac 430
|||| ||||
Sbjct: 715 caggcggac 723
>gb|DN551914.1|DN551914 pSPR-RT-MR-H2_C06_C282 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 801
Score = 174 bits (88), Expect = 9e-042
Identities = 229/276 (82%)
Strand = Plus / Minus
Query: 164 gagacggtgatcatcacggacatgaactactacccggtggccccctaccacttcgacctg 223
||||||||||||||||| ||||||||||||||||| ||| || || |||||||||||
Sbjct: 769 gagacggtgatcatcactgacatgaactactaccccgtgtccaagtatcacttcgacctc 710
Query: 224 agcggcactgccttcggggccatggcaaaagacgagcacaacgacgagctaaggcacgca 283
|||||||| || ||||| |||||||| || || | || ||||||||| | |||||
Sbjct: 709 agcggcacggcgttcggcgccatggccaagcccggccgcagcgacgagctccgccacgcc 650
Query: 284 ggaatcatcgacatccagttcaagagggttccctgccagtaccctggtctgacggtgacc 343
|| |||||||||||||||||||||||||| |||||| | ||||| || | || ||||||
Sbjct: 649 ggcatcatcgacatccagttcaagagggtgccctgcaactacccggggcagaaggtgacg 590
Query: 344 ttccacatcgagcgcggctccaaccccaactacctggcggtgctggtggagtacgagaac 403
|||||| | ||| |||||||||||| |||| | |||||||| || |||| ||| ||
Sbjct: 589 ttccacgtggaggagggctccaaccccgtctacttcgcggtgctcgtcgagttcgaagac 530
Query: 404 ggcgacggcgacgtggtgcaggtggacctgatggag 439
||||||||||||||||||||||||||||| ||||||
Sbjct: 529 ggcgacggcgacgtggtgcaggtggacctcatggag 494
Score = 87.7 bits (44), Expect = 2e-015
Identities = 136/164 (82%), Gaps = 2/164 (1%)
Strand = Plus / Minus
Query: 482 atgcgcgagtcctggggctccatatggaggatggacacccgccggccgctgcaagg-gcc 540
||||||||||||||||| ||||| |||||| ||||| || ||| |||| || | |||
Sbjct: 469 atgcgcgagtcctggggatccatctggaggctggactccggcca-ccgcctcaccgcgcc 411
Query: 541 cttctcgctgcgcgtcaccaacgagtccggcaagacgctggtggcggaccaggtcattcc 600
||||| |||||| |||||||||||||||||||||||||||||||| |||| ||||| ||
Sbjct: 410 gttctccctgcgcatcaccaacgagtccggcaagacgctggtggcgaaccaagtcatccc 351
Query: 601 ggcagactggcagcccgacaacgtctacagctccatcgtccagt 644
||| ||||| |||| ||| | |||| | |||||||||||||
Sbjct: 350 ggccaactgggtgcccaacacctactaccgttccatcgtccagt 307
>gb|CN130196.1|CN130196 RHOH1_39_H10.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_39_H10_A002 5', mRNA sequence
Length = 657
Score = 172 bits (87), Expect = 4e-041
Identities = 339/423 (80%)
Strand = Plus / Plus
Query: 17 ggcgcgtgcggcttcaagggcgtgaacatgccacctttctcggcgatgacgtcgtgcggc 76
||||| ||||| |||||| ||||||| |||| || ||||| |||||||| |||||||||
Sbjct: 149 ggcgcctgcgggttcaagaacgtgaacctgccgccgttctccgcgatgacctcgtgcggc 208
Query: 77 aacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagatccggtgcaag 136
|| |||| | ||||| || || || ||||| || |||||||||||||| |||||| ||
Sbjct: 209 aatcagcccctgttcaaagatggaaagggatgtggctcctgctaccagatacggtgccag 268
Query: 137 gcccaccctgcgtgctccggcgtggcggagacggtgatcatcacggacatgaactactac 196
|||||||| ||||||||| | ||||||||||||||||| |||||||||||||||
Sbjct: 269 aaacaccctgcctgctccggcaaccccgagacggtgatcatcactgacatgaactactac 328
Query: 197 ccggtggccccctaccacttcgacctgagcggcactgccttcggggccatggcaaaagac 256
|| ||| || || ||||||||||| |||||||| || ||||| |||||||| || |
Sbjct: 329 cccgtgaccaagtatcacttcgacctcagcggcacggcgttcggcgccatggccaagccc 388
Query: 257 gagcacaacgacgagctaaggcacgcaggaatcatcgacatccagttcaagagggttccc 316
| | |||| ||||||| | ||||| || ||||||||||||||||||||||| || |||
Sbjct: 389 ggccgcaacaacgagctccgccacgccggcatcatcgacatccagttcaagagagtgccc 448
Query: 317 tgccagtaccctggtctgacggtgaccttccacatcgagcgcggctccaaccccaactac 376
||| | ||||| || | || |||||| |||||| | ||| ||||| ||||| ||||
Sbjct: 449 tgcaactacccggggcagaaggtgacgttccacgtggaggagggctcgaacccggtctac 508
Query: 377 ctggcggtgctggtggagtacgagaacggcgacggcgacgtggtgcaggtggacctgatg 436
| |||||||| || |||| ||| ||||| |||||||| |||||||||||||| | |||
Sbjct: 509 ttcgcggtgctcgtcgagttcgaagacggcaacggcgacatggtgcaggtggacatcatg 568
Query: 437 gag 439
|||
Sbjct: 569 gag 571
Score = 40.1 bits (20), Expect = 0.35
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 482 atgcgcgagtcctggggctccatatggaggatggac 517
|||||||||||||| || ||||| |||||| |||||
Sbjct: 596 atgcgcgagtcctgcggatccatctggaggctggac 631
>gb|BI139874.1|BI139874 IP1_46_G07.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 546
Score = 170 bits (86), Expect = 1e-040
Identities = 176/203 (86%), Gaps = 6/203 (2%)
Strand = Plus / Plus
Query: 53 ttctcggcgatgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcggg 112
|||||| | ||||||||||| ||||||||||| ||||||||||||||||| || |||||
Sbjct: 336 ttctcgtccatgacgtcgtgtggcaacgagcccatcttcaaggacggcaagggctgcggc 395
Query: 113 tcctgctaccagatccggtgc---aag-gc--ccaccctgcgtgctccggcgtggcggag 166
|| ||||| ||||| |||||| ||| || |||||| || |||||||||||| || ||
Sbjct: 396 tcatgctatcagatacggtgccttaagagcaaccacccggcctgctccggcgtgccgcag 455
Query: 167 acggtgatcatcacggacatgaactactacccggtggccccctaccacttcgacctgagc 226
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 456 acggtgatcatcacggacatgaactactacccggttgccaagtaccacttcgacctgagc 515
Query: 227 ggcactgccttcggggccatggc 249
||||| || ||||| ||||||||
Sbjct: 516 ggcacggcgttcggcgccatggc 538
>gb|CD221137.1|CD221137 CCC1_73_H10.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_73_H10_A007 5', mRNA sequence
Length = 687
Score = 170 bits (86), Expect = 1e-040
Identities = 176/203 (86%), Gaps = 6/203 (2%)
Strand = Plus / Plus
Query: 53 ttctcggcgatgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcggg 112
|||||| | ||||||||||| ||||||||||| ||||||||||||||||| || |||||
Sbjct: 335 ttctcgtccatgacgtcgtgtggcaacgagcccatcttcaaggacggcaagggctgcggc 394
Query: 113 tcctgctaccagatccggtgc---aag-gc--ccaccctgcgtgctccggcgtggcggag 166
|| ||||| ||||| |||||| ||| || |||||| || |||||||||||| || ||
Sbjct: 395 tcatgctatcagatacggtgccttaagagcaaccacccggcctgctccggcgtgccgcag 454
Query: 167 acggtgatcatcacggacatgaactactacccggtggccccctaccacttcgacctgagc 226
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 455 acggtgatcatcacggacatgaactactacccggttgccaagtaccacttcgacctgagc 514
Query: 227 ggcactgccttcggggccatggc 249
||||| || ||||| ||||||||
Sbjct: 515 ggcacggcgttcggcgccatggc 537
>gb|CD221711.1|CD221711 CCC1_70_E10.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_70_E10_A007 5', mRNA sequence
Length = 591
Score = 170 bits (86), Expect = 1e-040
Identities = 176/203 (86%), Gaps = 6/203 (2%)
Strand = Plus / Plus
Query: 53 ttctcggcgatgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcggg 112
|||||| | ||||||||||| ||||||||||| ||||||||||||||||| || |||||
Sbjct: 336 ttctcgtccatgacgtcgtgtggcaacgagcccatcttcaaggacggcaagggctgcggc 395
Query: 113 tcctgctaccagatccggtgc---aag-gc--ccaccctgcgtgctccggcgtggcggag 166
|| ||||| ||||| |||||| ||| || |||||| || |||||||||||| || ||
Sbjct: 396 tcatgctatcagatacggtgccttaagagcaaccacccggcctgctccggcgtgccgcag 455
Query: 167 acggtgatcatcacggacatgaactactacccggtggccccctaccacttcgacctgagc 226
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 456 acggtgatcatcacggacatgaactactacccggttgccaagtaccacttcgacctgagc 515
Query: 227 ggcactgccttcggggccatggc 249
||||| || ||||| ||||||||
Sbjct: 516 ggcacggcgttcggcgccatggc 538
>gb|CD223182.1|CD223182 CCC1_26_F12.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_26_F12_A007 5', mRNA sequence
Length = 664
Score = 170 bits (86), Expect = 1e-040
Identities = 176/203 (86%), Gaps = 6/203 (2%)
Strand = Plus / Plus
Query: 53 ttctcggcgatgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcggg 112
|||||| | ||||||||||| ||||||||||| ||||||||||||||||| || |||||
Sbjct: 336 ttctcgtccatgacgtcgtgtggcaacgagcccatcttcaaggacggcaagggctgcggc 395
Query: 113 tcctgctaccagatccggtgc---aag-gc--ccaccctgcgtgctccggcgtggcggag 166
|| ||||| ||||| |||||| ||| || |||||| || |||||||||||| || ||
Sbjct: 396 tcatgctatcagatacggtgccttaagagcaaccacccggcctgctccggcgtgccgcag 455
Query: 167 acggtgatcatcacggacatgaactactacccggtggccccctaccacttcgacctgagc 226
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 456 acggtgatcatcacggacatgaactactacccggttgccaagtaccacttcgacctgagc 515
Query: 227 ggcactgccttcggggccatggc 249
||||| || ||||| ||||||||
Sbjct: 516 ggcacggcgttcggcgccatggc 538
>gb|CD223670.1|CD223670 CCC1_29_B07.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_29_B07_A007 5', mRNA sequence
Length = 657
Score = 170 bits (86), Expect = 1e-040
Identities = 176/203 (86%), Gaps = 6/203 (2%)
Strand = Plus / Plus
Query: 53 ttctcggcgatgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcggg 112
|||||| | ||||||||||| ||||||||||| ||||||||||||||||| || |||||
Sbjct: 335 ttctcgtccatgacgtcgtgtggcaacgagcccatcttcaaggacggcaagggctgcggc 394
Query: 113 tcctgctaccagatccggtgc---aag-gc--ccaccctgcgtgctccggcgtggcggag 166
|| ||||| ||||| |||||| ||| || |||||| || |||||||||||| || ||
Sbjct: 395 tcatgctatcagatacggtgccttaagagcaaccacccggcctgctccggcgtgccgcag 454
Query: 167 acggtgatcatcacggacatgaactactacccggtggccccctaccacttcgacctgagc 226
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 455 acggtgatcatcacggacatgaactactacccggttgccaagtaccacttcgacctgagc 514
Query: 227 ggcactgccttcggggccatggc 249
||||| || ||||| ||||||||
Sbjct: 515 ggcacggcgttcggcgccatggc 537
>gb|CD225200.1|CD225200 CCC1_38_F05.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_38_F05_A007 5', mRNA sequence
Length = 658
Score = 170 bits (86), Expect = 1e-040
Identities = 176/203 (86%), Gaps = 6/203 (2%)
Strand = Plus / Plus
Query: 53 ttctcggcgatgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcggg 112
|||||| | ||||||||||| ||||||||||| ||||||||||||||||| || |||||
Sbjct: 335 ttctcgtccatgacgtcgtgtggcaacgagcccatcttcaaggacggcaagggctgcggc 394
Query: 113 tcctgctaccagatccggtgc---aag-gc--ccaccctgcgtgctccggcgtggcggag 166
|| ||||| ||||| |||||| ||| || |||||| || |||||||||||| || ||
Sbjct: 395 tcatgctatcagatacggtgccttaagagcaaccacccggcctgctccggcgtgccgcag 454
Query: 167 acggtgatcatcacggacatgaactactacccggtggccccctaccacttcgacctgagc 226
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 455 acggtgatcatcacggacatgaactactacccggttgccaagtaccacttcgacctgagc 514
Query: 227 ggcactgccttcggggccatggc 249
||||| || ||||| ||||||||
Sbjct: 515 ggcacggcgttcggcgccatggc 537
>gb|CD227137.1|CD227137 CCC1_4_D07.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_4_D07_A007 5', mRNA sequence
Length = 604
Score = 170 bits (86), Expect = 1e-040
Identities = 176/203 (86%), Gaps = 6/203 (2%)
Strand = Plus / Plus
Query: 53 ttctcggcgatgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcggg 112
|||||| | ||||||||||| ||||||||||| ||||||||||||||||| || |||||
Sbjct: 320 ttctcgtccatgacgtcgtgtggcaacgagcccatcttcaaggacggcaagggctgcggc 379
Query: 113 tcctgctaccagatccggtgc---aag-gc--ccaccctgcgtgctccggcgtggcggag 166
|| ||||| ||||| |||||| ||| || |||||| || |||||||||||| || ||
Sbjct: 380 tcatgctatcagatacggtgccttaagagcaaccacccggcctgctccggcgtgccgcag 439
Query: 167 acggtgatcatcacggacatgaactactacccggtggccccctaccacttcgacctgagc 226
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 440 acggtgatcatcacggacatgaactactacccggttgccaagtaccacttcgacctgagc 499
Query: 227 ggcactgccttcggggccatggc 249
||||| || ||||| ||||||||
Sbjct: 500 ggcacggcgttcggcgccatggc 522
>gb|CN134577.1|CN134577 OX1_27_E09.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_27_E09_A002 3', mRNA sequence
Length = 780
Score = 168 bits (85), Expect = 6e-040
Identities = 281/344 (81%), Gaps = 8/344 (2%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
|||||||||||||||||| |||| | ||| |||||||| | || ||||| | ||||||
Sbjct: 68 atgacgtcgtgcggcaaccagcccttgttccaggacggccagggctgcggcgcatgctac 127
Query: 122 cagatccggtgcaaggc------ccaccctgcgtgctccggcgtggcggagacggtgatc 175
|||||| |||||| || | |||| || |||||||||| || | ||||||||||
Sbjct: 128 cagatcaggtgcaccgctaaaaacaacccagcctgctccggcgaggtgaagacggtgatg 187
Query: 176 atcacggacatgaactactacccggtggccccctaccacttcgacctgagcggcactgcc 235
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 188 atcacggacatgaactactacccggtggcgaggtaccacttcgacctgagcggcacggcg 247
Query: 236 ttcggggccatggcaaaagacga-gcacaacgacgagctaaggcacgcaggaatcatcga 294
|||||| ||||||| | | ||| || ||||||| |||| ||||||| || ||||||||
Sbjct: 248 ttcgggtccatggc-gaggccgaggctcaacgacaagctccggcacgcgggcatcatcga 306
Query: 295 catccagttcaagagggttccctgccagtaccctggtctgacggtgaccttccacatcga 354
||||||||||| |||||| ||||| | ||| || || || || | ||||||| | |
Sbjct: 307 catccagttcaggagggtggcctgcaacaaccgggggctcaccgtcaacttccacgtgca 366
Query: 355 gcgcggctccaaccccaactacctggcggtgctggtggagtacg 398
| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ggccggctccaaccccaactacctggcggtgctggtggagtacg 410
>gb|CN134664.1|CN134664 OX1_27_E09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_27_E09_A002 5', mRNA sequence
Length = 723
Score = 168 bits (85), Expect = 6e-040
Identities = 281/344 (81%), Gaps = 8/344 (2%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
|||||||||||||||||| |||| | ||| |||||||| | || ||||| | ||||||
Sbjct: 309 atgacgtcgtgcggcaaccagcccttgttccaggacggccagggctgcggcgcatgctac 368
Query: 122 cagatccggtgcaaggc------ccaccctgcgtgctccggcgtggcggagacggtgatc 175
|||||| |||||| || | |||| || |||||||||| || | ||||||||||
Sbjct: 369 cagatcaggtgcaccgctaaaaacaacccagcctgctccggcgaggtgaagacggtgatg 428
Query: 176 atcacggacatgaactactacccggtggccccctaccacttcgacctgagcggcactgcc 235
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 429 atcacggacatgaactactacccggtggcgaggtaccacttcgacctgagcggcacggcg 488
Query: 236 ttcggggccatggcaaaagacga-gcacaacgacgagctaaggcacgcaggaatcatcga 294
|||||| ||||||| | | ||| || ||||||| |||| ||||||| || ||||||||
Sbjct: 489 ttcgggtccatggc-gaggccgaggctcaacgacaagctccggcacgcgggcatcatcga 547
Query: 295 catccagttcaagagggttccctgccagtaccctggtctgacggtgaccttccacatcga 354
||||||||||| |||||| ||||| | ||| || || || || | ||||||| | |
Sbjct: 548 catccagttcaggagggtggcctgcaacaaccgggggctcaccgtcaacttccacgtgca 607
Query: 355 gcgcggctccaaccccaactacctggcggtgctggtggagtacg 398
| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ggccggctccaaccccaactacctggcggtgctggtggagtacg 651
>gb|CD428079.1|CD428079 ETH1_32_E01.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_32_E01_A002 5', mRNA sequence
Length = 456
Score = 167 bits (84), Expect = 2e-039
Identities = 228/276 (82%)
Strand = Plus / Plus
Query: 164 gagacggtgatcatcacggacatgaactactacccggtggccccctaccacttcgacctg 223
||||||||||||||||| ||||||||||||||||| ||| || || |||||||||||
Sbjct: 26 gagacggtgatcatcactgacatgaactactaccccgtgtccaagtatcacttcgacctc 85
Query: 224 agcggcactgccttcggggccatggcaaaagacgagcacaacgacgagctaaggcacgca 283
|||||||| || ||||| |||||||| || || | || ||||||||| | |||||
Sbjct: 86 agcggcacggcgttcggcgccatggccaagcccggccgcagcgacgagctccgccacgcc 145
Query: 284 ggaatcatcgacatccagttcaagagggttccctgccagtaccctggtctgacggtgacc 343
|| |||||||||||||||||||||||||| |||||| | ||||| || | || ||||||
Sbjct: 146 ggcatcatcgacatccagttcaagagggtgccctgcaactaccccgggcagaaggtgacg 205
Query: 344 ttccacatcgagcgcggctccaaccccaactacctggcggtgctggtggagtacgagaac 403
|||||| | ||| |||||||||||| |||| | |||||||| || || | ||| ||
Sbjct: 206 ttccacgtggaggagggctccaaccccgtctacttcgcggtgctcgtcgaattcgaagac 265
Query: 404 ggcgacggcgacgtggtgcaggtggacctgatggag 439
||||||||||||||||||||||||||||| ||||||
Sbjct: 266 ggcgacggcgacgtggtgcaggtggacctcatggag 301
Score = 81.8 bits (41), Expect = 1e-013
Identities = 100/117 (85%), Gaps = 2/117 (1%)
Strand = Plus / Plus
Query: 482 atgcgcgagtcctggggctccatatggaggatggacacccgccggccgctgcaagg-gcc 540
||||||||||||||||| ||||| |||||| ||||| || ||| |||| || | |||
Sbjct: 326 atgcgcgagtcctggggatccatctggaggctggactccggcca-ccgcctcaccgcgcc 384
Query: 541 cttctcgctgcgcgtcaccaacgagtccggcaagacgctggtggcggaccaggtcat 597
||||| |||||| |||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 385 gttctccctgcgcatcaccaacgagtccggcaagacgctggtggcgaaccaagtcat 441
>gb|CN133353.1|CN133353 OX1_11_E08.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_11_E08_A002 5', mRNA sequence
Length = 778
Score = 167 bits (84), Expect = 2e-039
Identities = 278/343 (81%), Gaps = 6/343 (1%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
|||||||||||||||||| |||| | ||| |||||||| | || ||||| | ||||||
Sbjct: 321 atgacgtcgtgcggcaaccagcccttgttccaggacggccagggctgcggcgcatgctac 380
Query: 122 cagatccggtgcaaggc------ccaccctgcgtgctccggcgtggcggagacggtgatc 175
|||||| |||||| || | |||| || |||||||||| || | ||||||||||
Sbjct: 381 cagatcaggtgcaccgctaaaaacaacccagcctgctccggcgaggtgaagacggtgatg 440
Query: 176 atcacggacatgaactactacccggtggccccctaccacttcgacctgagcggcactgcc 235
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 441 atcacggacatgaactactacccggtggcgaggtaccacttcgacctgagcggcacggcg 500
Query: 236 ttcggggccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgac 295
|||||| ||||||| | | || ||||||| |||| ||||||| || |||||||||
Sbjct: 501 ttcgggtccatggcgaggccggggctcaacgacaagctccggcacgcgggcatcatcgac 560
Query: 296 atccagttcaagagggttccctgccagtaccctggtctgacggtgaccttccacatcgag 355
|||||||||| |||||| ||||| | ||| || || || || | ||||||| | ||
Sbjct: 561 atccagttcaggagggtggcctgcaacaaccgggggctcaccgtcaacttccacgtgcag 620
Query: 356 cgcggctccaaccccaactacctggcggtgctggtggagtacg 398
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gccggctccaaccccaactacctggcggtgctggtggagtacg 663
>gb|CN134421.1|CN134421 OX1_26_F05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_F05_A002 3', mRNA sequence
Length = 832
Score = 167 bits (84), Expect = 2e-039
Identities = 228/276 (82%)
Strand = Plus / Plus
Query: 164 gagacggtgatcatcacggacatgaactactacccggtggccccctaccacttcgacctg 223
||||||||||||||||| ||||||||||||||||| ||| || || |||||||||||
Sbjct: 90 gagacggtgatcatcactgacatgaactactaccccgtgtccaagtatcacttcgacctc 149
Query: 224 agcggcactgccttcggggccatggcaaaagacgagcacaacgacgagctaaggcacgca 283
|||||||| || ||||| |||||||| || || | || ||||||||| | |||||
Sbjct: 150 agcggcacggcgttcggcgccatggccaagcccggccgcagcgacgagctccgccacgcc 209
Query: 284 ggaatcatcgacatccagttcaagagggttccctgccagtaccctggtctgacggtgacc 343
|| |||||||||||||||||||||||||| |||||| | ||||| || | || ||||||
Sbjct: 210 ggcatcatcgacatccagttcaagagggtgccctgcaactaccccgggcagaaggtgacg 269
Query: 344 ttccacatcgagcgcggctccaaccccaactacctggcggtgctggtggagtacgagaac 403
|||||| | ||| |||||||||||| |||| | |||||||| || || | ||| ||
Sbjct: 270 ttccacgtggaggagggctccaaccccgtctacttcgcggtgctcgtcgaattcgaagac 329
Query: 404 ggcgacggcgacgtggtgcaggtggacctgatggag 439
||||||||||||||||||||||||||||| ||||||
Sbjct: 330 ggcgacggcgacgtggtgcaggtggacctcatggag 365
Score = 87.7 bits (44), Expect = 2e-015
Identities = 136/164 (82%), Gaps = 2/164 (1%)
Strand = Plus / Plus
Query: 482 atgcgcgagtcctggggctccatatggaggatggacacccgccggccgctgcaagg-gcc 540
||||||||||||||||| ||||| |||||| ||||| || ||| |||| || | |||
Sbjct: 390 atgcgcgagtcctggggatccatctggaggctggactccggcca-ccgcctcaccgcgcc 448
Query: 541 cttctcgctgcgcgtcaccaacgagtccggcaagacgctggtggcggaccaggtcattcc 600
||||| |||||| |||||||||||||||||||||||||||||||| |||| ||||| ||
Sbjct: 449 gttctccctgcgcatcaccaacgagtccggcaagacgctggtggcgaaccaagtcatccc 508
Query: 601 ggcagactggcagcccgacaacgtctacagctccatcgtccagt 644
||| ||||| |||| ||| | |||| | |||||||||||||
Sbjct: 509 ggccaactgggtgcccaacacctactaccgttccatcgtccagt 552
Score = 56.0 bits (28), Expect = 6e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 75 gcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctaccagat 126
|||||||||| | |||||||||||||| || ||||| ||||||||||||||
Sbjct: 1 gcaacgagcccttgttcaaggacggcaagggctgcggctcctgctaccagat 52
>gb|CX606182.1|CX606182 ANR1_1_C10.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_1_C10_A002 5', mRNA sequence
Length = 811
Score = 167 bits (84), Expect = 2e-039
Identities = 278/343 (81%), Gaps = 6/343 (1%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
|||||||||||||||||| |||| | ||| |||||||| | || ||||| | ||||||
Sbjct: 329 atgacgtcgtgcggcaaccagcccttgttccaggacggccagggctgcggcgcatgctac 388
Query: 122 cagatccggtgcaaggc------ccaccctgcgtgctccggcgtggcggagacggtgatc 175
|||||| |||||| || | |||| || |||||||||| || | ||||||||||
Sbjct: 389 cagatcaggtgcaccgctaaaaacaacccagcctgctccggcgaggtgaagacggtgatg 448
Query: 176 atcacggacatgaactactacccggtggccccctaccacttcgacctgagcggcactgcc 235
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 449 atcacggacatgaactactacccggtggcgaggtaccacttcgacctgagcggcacggcg 508
Query: 236 ttcggggccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgac 295
|||||| ||||||| | | || ||||||| |||| ||||||| || |||||||||
Sbjct: 509 ttcgggtccatggcgaggccggggctcaacgacaagctccggcacgcgggcatcatcgac 568
Query: 296 atccagttcaagagggttccctgccagtaccctggtctgacggtgaccttccacatcgag 355
|||||||||| |||||| ||||| | ||| || || || || | ||||||| | ||
Sbjct: 569 atccagttcaggagggtggcctgcaacaaccgggggctcaccgtcaacttccacgtgcag 628
Query: 356 cgcggctccaaccccaactacctggcggtgctggtggagtacg 398
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gccggctccaaccccaactacctggcggtgctggtggagtacg 671
>gb|CX616580.1|CX616580 GABR1_28_F03.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_28_F03_A002 5', mRNA sequence
Length = 809
Score = 167 bits (84), Expect = 2e-039
Identities = 278/343 (81%), Gaps = 6/343 (1%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
|||||||||||||||||| |||| | ||| |||||||| | || ||||| | ||||||
Sbjct: 353 atgacgtcgtgcggcaaccagcccttgttccaggacggccagggctgcggcgcatgctac 412
Query: 122 cagatccggtgcaaggc------ccaccctgcgtgctccggcgtggcggagacggtgatc 175
|||||| |||||| || | |||| || |||||||||| || | ||||||||||
Sbjct: 413 cagatcaggtgcaccgctaaaaacaacccagcctgctccggcgaggtgaagacggtgatg 472
Query: 176 atcacggacatgaactactacccggtggccccctaccacttcgacctgagcggcactgcc 235
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 473 atcacggacatgaactactacccggtggcgaggtaccacttcgacctgagcggcacggcg 532
Query: 236 ttcggggccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgac 295
|||||| ||||||| | | || ||||||| |||| ||||||| || |||||||||
Sbjct: 533 ttcgggtccatggcgaggccggggctcaacgacaagctccggcacgcgggcatcatcgac 592
Query: 296 atccagttcaagagggttccctgccagtaccctggtctgacggtgaccttccacatcgag 355
|||||||||| |||||| ||||| | ||| || || || || | ||||||| | ||
Sbjct: 593 atccagttcaggagggtggcctgcaacaaccgggggctcaccgtcaacttccacgtgcag 652
Query: 356 cgcggctccaaccccaactacctggcggtgctggtggagtacg 398
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 gccggctccaaccccaactacctggcggtgctggtggagtacg 695
>gb|AW677546.1|AW677546 DG1_8_G07.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 479
Score = 165 bits (83), Expect = 9e-039
Identities = 311/384 (80%), Gaps = 6/384 (1%)
Strand = Plus / Plus
Query: 53 ttctcggcgatgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcggg 112
|||||| | ||||||||||| ||||||||||| ||||||||||||||||| || |||||
Sbjct: 31 ttctcgtccatgacgtcgtgtggcaacgagcccatcttcaaggacggcaagggctgcggc 90
Query: 113 tcctgctaccagatccggtgc---aag-gc--ccaccctgcgtgctccggcgtggcggag 166
|| ||||| ||||| |||||| ||| || |||||| || |||||||||||| || ||
Sbjct: 91 tcatgctatcagatacggtgccttaagagcaaccacccggcctgctccggcgtgccgcag 150
Query: 167 acggtgatcatcacggacatgaactactacccggtggccccctaccacttcgacctgagc 226
|||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 151 acggtgatcatcaccgacatgaactactacccggttgccaagtaccacttcgacctgagc 210
Query: 227 ggcactgccttcggggccatggcaaaagacgagcacaacgacgagctaaggcacgcagga 286
||||| || ||||| |||||||| | | | ||||||| |||| ||||||| ||
Sbjct: 211 ggcacggcgttcggcgccatggcgagctggggcctcaacgacaagctccggcacgccggg 270
Query: 287 atcatcgacatccagttcaagagggttccctgccagtaccctggtctgacggtgaccttc 346
||||||||||| ||||||| |||||| || ||| | | ||| || ||||| | || |||
Sbjct: 271 atcatcgacatgcagttcaggagggtgccgtgcaacttcccgggcctgaccatcacgttc 330
Query: 347 cacatcgagcgcggctccaaccccaactacctggcggtgctggtggagtacgagaacggc 406
| | | ||| ||| |||||||||| ||||| || ||||| | ||| ||||||||
Sbjct: 331 cgcgtgcagcacgggtccaaccccatgtacctcgccgtgctcatcgagcacgagaaccag 390
Query: 407 gacggcgacgtggtgcaggtggac 430
||||||||||||||||||| ||||
Sbjct: 391 gacggcgacgtggtgcaggcggac 414
Score = 60.0 bits (30), Expect = 4e-007
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 472 ctgggagcccatgcgcgagtcctggggctccatatggaggat 513
|||||||||||||| |||||||||||| ||||| ||||||||
Sbjct: 438 ctgggagcccatgcacgagtcctggggatccatctggaggat 479
>gb|CD223869.1|CD223869 CCC1_30_D11.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_30_D11_A007 5', mRNA sequence
Length = 637
Score = 165 bits (83), Expect = 9e-039
Identities = 284/351 (80%)
Strand = Plus / Plus
Query: 37 cgtgaacatgccacctttctcggcgatgacgtcgtgcggcaacgagccaatcttcaagga 96
||||||| |||| || |||||||| ||||| ||||||||||||||||| | ||||||||
Sbjct: 282 cgtgaacctgccgccgttctcggcaatgacatcgtgcggcaacgagcccttgttcaagga 341
Query: 97 cggcaaaggatgcgggtcctgctaccagatccggtgcaaggcccaccctgcgtgctccgg 156
|||||| || ||||| |||||||||||||| || ||| | | || ||| ||||||||
Sbjct: 342 cggcaagggctgcggctcctgctaccagatacgatgccaaaacaacgatgcctgctccgg 401
Query: 157 cgtggcggagacggtgatcatcacggacatgaactactacccggtggccccctaccactt 216
| | ||||||||||||||||| ||||||||||||||||| ||| || || |||||
Sbjct: 402 caaccctgagacggtgatcatcactgacatgaactactaccccgtgtccaagtatcactt 461
Query: 217 cgacctgagcggcactgccttcggggccatggcaaaagacgagcacaacgacgagctaag 276
|||||| |||||||| || ||||| |||||||| || || | || ||||||||| |
Sbjct: 462 cgacctcagcggcacggcgttcggcgccatggccaagcccggccgcagcgacgagctccg 521
Query: 277 gcacgcaggaatcatcgacatccagttcaagagggttccctgccagtaccctggtctgac 336
||||| || |||||||||||||||||||||||||| |||||| | ||||| || | ||
Sbjct: 522 ccacgccggcatcatcgacatccagttcaagagggtgccctgcaactaccccgggcagaa 581
Query: 337 ggtgaccttccacatcgagcgcggctccaaccccaactacctggcggtgct 387
|||||| |||||| | ||| |||||||||||| |||| | ||||||||
Sbjct: 582 ggtgacgttccacgtggaggagggctccaaccccgtctacttcgcggtgct 632
>gb|CD225188.1|CD225188 CCC1_38_A02.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_38_A02_A007 5', mRNA sequence
Length = 635
Score = 165 bits (83), Expect = 9e-039
Identities = 284/351 (80%)
Strand = Plus / Plus
Query: 37 cgtgaacatgccacctttctcggcgatgacgtcgtgcggcaacgagccaatcttcaagga 96
||||||| |||| || |||||||| ||||| ||||||||||||||||| | ||||||||
Sbjct: 282 cgtgaacctgccgccgttctcggcaatgacatcgtgcggcaacgagcccttgttcaagga 341
Query: 97 cggcaaaggatgcgggtcctgctaccagatccggtgcaaggcccaccctgcgtgctccgg 156
|||||| || ||||| |||||||||||||| || ||| | | || ||| ||||||||
Sbjct: 342 cggcaagggctgcggctcctgctaccagatacgatgccaaaacaacgatgcctgctccgg 401
Query: 157 cgtggcggagacggtgatcatcacggacatgaactactacccggtggccccctaccactt 216
| | ||||||||||||||||| ||||||||||||||||| ||| || || |||||
Sbjct: 402 caaccctgagacggtgatcatcactgacatgaactactaccccgtgtccaagtatcactt 461
Query: 217 cgacctgagcggcactgccttcggggccatggcaaaagacgagcacaacgacgagctaag 276
|||||| |||||||| || ||||| |||||||| || || | || ||||||||| |
Sbjct: 462 cgacctcagcggcacggcgttcggcgccatggccaagcccggccgcagcgacgagctccg 521
Query: 277 gcacgcaggaatcatcgacatccagttcaagagggttccctgccagtaccctggtctgac 336
||||| || |||||||||||||||||||||||||| |||||| | ||||| || | ||
Sbjct: 522 ccacgccggcatcatcgacatccagttcaagagggtgccctgcaactaccccgggcagaa 581
Query: 337 ggtgaccttccacatcgagcgcggctccaaccccaactacctggcggtgct 387
|||||| |||||| | ||| |||||||||||| |||| | ||||||||
Sbjct: 582 ggtgacgttccacgtggaggagggctccaaccccgtctacttcgcggtgct 632
>gb|CD227465.1|CD227465 CCC1_51_H01.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_51_H01_A007 5', mRNA sequence
Length = 647
Score = 165 bits (83), Expect = 9e-039
Identities = 284/351 (80%)
Strand = Plus / Plus
Query: 37 cgtgaacatgccacctttctcggcgatgacgtcgtgcggcaacgagccaatcttcaagga 96
||||||| |||| || |||||||| ||||| ||||||||||||||||| | ||||||||
Sbjct: 288 cgtgaacctgccgccgttctcggcaatgacatcgtgcggcaacgagcccttgttcaagga 347
Query: 97 cggcaaaggatgcgggtcctgctaccagatccggtgcaaggcccaccctgcgtgctccgg 156
|||||| || ||||| |||||||||||||| || ||| | | || ||| ||||||||
Sbjct: 348 cggcaagggctgcggctcctgctaccagatacgatgccaaaacaacgatgcctgctccgg 407
Query: 157 cgtggcggagacggtgatcatcacggacatgaactactacccggtggccccctaccactt 216
| | ||||||||||||||||| ||||||||||||||||| ||| || || |||||
Sbjct: 408 caaccctgagacggtgatcatcactgacatgaactactaccccgtgtccaagtatcactt 467
Query: 217 cgacctgagcggcactgccttcggggccatggcaaaagacgagcacaacgacgagctaag 276
|||||| |||||||| || ||||| |||||||| || || | || ||||||||| |
Sbjct: 468 cgacctcagcggcacggcgttcggcgccatggccaagcccggccgcagcgacgagctccg 527
Query: 277 gcacgcaggaatcatcgacatccagttcaagagggttccctgccagtaccctggtctgac 336
||||| || |||||||||||||||||||||||||| |||||| | ||||| || | ||
Sbjct: 528 ccacgccggcatcatcgacatccagttcaagagggtgccctgcaactaccccgggcagaa 587
Query: 337 ggtgaccttccacatcgagcgcggctccaaccccaactacctggcggtgct 387
|||||| |||||| | ||| |||||||||||| |||| | ||||||||
Sbjct: 588 ggtgacgttccacgtggaggagggctccaaccccgtctacttcgcggtgct 638
>gb|CD236070.1|CD236070 SS1_25_E11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_25_E11_A012 5', mRNA sequence
Length = 641
Score = 165 bits (83), Expect = 9e-039
Identities = 284/351 (80%)
Strand = Plus / Plus
Query: 37 cgtgaacatgccacctttctcggcgatgacgtcgtgcggcaacgagccaatcttcaagga 96
||||||| |||| || |||||||| ||||| ||||||||||||||||| | ||||||||
Sbjct: 282 cgtgaacctgccgccgttctcggcaatgacatcgtgcggcaacgagcccttgttcaagga 341
Query: 97 cggcaaaggatgcgggtcctgctaccagatccggtgcaaggcccaccctgcgtgctccgg 156
|||||| || ||||| |||||||||||||| || ||| | | || ||| ||||||||
Sbjct: 342 cggcaagggctgcggctcctgctaccagatacgatgccaaaacaacgatgcctgctccgg 401
Query: 157 cgtggcggagacggtgatcatcacggacatgaactactacccggtggccccctaccactt 216
| | ||||||||||||||||| ||||||||||||||||| ||| || || |||||
Sbjct: 402 caaccctgagacggtgatcatcactgacatgaactactaccccgtgtccaagtatcactt 461
Query: 217 cgacctgagcggcactgccttcggggccatggcaaaagacgagcacaacgacgagctaag 276
|||||| |||||||| || ||||| |||||||| || || | || ||||||||| |
Sbjct: 462 cgacctcagcggcacggcgttcggcgccatggccaagcccggccgcagcgacgagctccg 521
Query: 277 gcacgcaggaatcatcgacatccagttcaagagggttccctgccagtaccctggtctgac 336
||||| || |||||||||||||||||||||||||| |||||| | ||||| || | ||
Sbjct: 522 ccacgccggcatcatcgacatccagttcaagagggtgccctgcaactaccccgggcagaa 581
Query: 337 ggtgaccttccacatcgagcgcggctccaaccccaactacctggcggtgct 387
|||||| |||||| | ||| |||||||||||| |||| | ||||||||
Sbjct: 582 ggtgacgttccacgtggaggagggctccaaccccgtctacttcgcggtgct 632
>gb|CN136121.1|CN136121 OX1_40_H11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_40_H11_A002 5', mRNA sequence
Length = 829
Score = 165 bits (83), Expect = 9e-039
Identities = 311/384 (80%), Gaps = 6/384 (1%)
Strand = Plus / Plus
Query: 53 ttctcggcgatgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcggg 112
|||||| | ||||||||||| ||||||||||| ||||||||||||||||| || |||||
Sbjct: 321 ttctcgtccatgacgtcgtgtggcaacgagcccatcttcaaggacggcaagggctgcggc 380
Query: 113 tcctgctaccagatccggtgc---aag-gc--ccaccctgcgtgctccggcgtggcggag 166
|| ||||| ||||| |||||| ||| || |||||| || |||||||||||| || ||
Sbjct: 381 tcatgctatcagatacggtgccttaagagcaaccacccggcctgctccggcgtgccgcag 440
Query: 167 acggtgatcatcacggacatgaactactacccggtggccccctaccacttcgacctgagc 226
|||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 441 acggtgatcatcaccgacatgaactactacccggttgccaagtaccacttcgacctgagc 500
Query: 227 ggcactgccttcggggccatggcaaaagacgagcacaacgacgagctaaggcacgcagga 286
||||| || ||||| |||||||| | | | ||||||| |||| ||||||| ||
Sbjct: 501 ggcacggcgttcggcgccatggcgagctggggcctcaacgacaagctccggcacgccggg 560
Query: 287 atcatcgacatccagttcaagagggttccctgccagtaccctggtctgacggtgaccttc 346
||||||||||| ||||||| |||||| || ||| | | ||| || ||||| | || |||
Sbjct: 561 atcatcgacatgcagttcaggagggtgccgtgcaacttcccgggcctgaccatcacgttc 620
Query: 347 cacatcgagcgcggctccaaccccaactacctggcggtgctggtggagtacgagaacggc 406
| | | ||| ||| |||||||||| ||||| || ||||| | ||| ||||||||
Sbjct: 621 cgcgtgcagcacgggtccaaccccatgtacctcgccgtgctcatcgagcacgagaaccag 680
Query: 407 gacggcgacgtggtgcaggtggac 430
||||||||||||||||||| ||||
Sbjct: 681 gacggcgacgtggtgcaggcggac 704
Score = 69.9 bits (35), Expect = 4e-010
Identities = 88/103 (85%), Gaps = 2/103 (1%)
Strand = Plus / Plus
Query: 472 ctgggagcccatgcgcgagtcctggggctccatatggaggatggacacccgccggccgct 531
|||||||||||||| |||||||||||| ||||| |||||||| ||| || ||| |||||
Sbjct: 728 ctgggagcccatgcacgagtcctggggatccatctggaggatcgaccccaaccgcccgct 787
Query: 532 gcaaggg-cccttctcgctgcgcgtcaccaacgagtccggcaa 573
|| ||| |||||||| | ||| |||||||||||||||||||
Sbjct: 788 -caggggccccttctccatccgcatcaccaacgagtccggcaa 829
>gb|CX614568.1|CX614568 GABR1_14_H01.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_14_H01_A002 5', mRNA sequence
Length = 792
Score = 165 bits (83), Expect = 9e-039
Identities = 277/342 (80%), Gaps = 6/342 (1%)
Strand = Plus / Plus
Query: 62 atgacgtcgtgcggcaacgagccaatcttcaaggacggcaaaggatgcgggtcctgctac 121
|||||||||||||||||| |||| | ||| |||||||| | || ||||| | ||||||
Sbjct: 342 atgacgtcgtgcggcaaccagcccttgttccaggacggccagggctgcggcgcatgctac 401
Query: 122 cagatccggtgcaaggc------ccaccctgcgtgctccggcgtggcggagacggtgatc 175
|||||| |||||| || | |||| || |||||||||| || | ||||||||||
Sbjct: 402 cagatcaggtgcaccgctaaaaacaacccagcctgctccggcgaggtgaagacggtgatg 461
Query: 176 atcacggacatgaactactacccggtggccccctaccacttcgacctgagcggcactgcc 235
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 462 atcacggacatgaactactacccggtggcgaggtaccacttcgacctgagcggcacggcg 521
Query: 236 ttcggggccatggcaaaagacgagcacaacgacgagctaaggcacgcaggaatcatcgac 295
|||||| ||||||| | | || ||||||| |||| ||||||| || |||||||||
Sbjct: 522 ttcgggtccatggcgaggccggggctcaacgacaagctccggcacgcgggcatcatcgac 581
Query: 296 atccagttcaagagggttccctgccagtaccctggtctgacggtgaccttccacatcgag 355
|||||||||| |||||| ||||| | ||| || || || || | ||||||| | ||
Sbjct: 582 atccagttcaggagggtggcctgcaacaaccgggggctcaccgtcaacttccacgtgcag 641
Query: 356 cgcggctccaaccccaactacctggcggtgctggtggagtac 397
||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 gccggctccaaccccaactacctggcggtgctggtggagtac 683
>gb|CX620407.1|CX620407 GABR1_51_E02.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_51_E02_A002 5', mRNA sequence
Length = 630
Score = 165 bits (83), Expect = 9e-039
Identities = 284/351 (80%)
Strand = Plus / Plus
Query: 37 cgtgaacatgccacctttctcggcgatgacgtcgtgcggcaacgagccaatcttcaagga 96
||||||| |||| || |||||||| ||||| ||||||||||||||||| | ||||||||
Sbjct: 269 cgtgaacctgccgccgttctcggcaatgacatcgtgcggcaacgagcccttgttcaagga 328
Query: 97 cggcaaaggatgcgggtcctgctaccagatccggtgcaaggcccaccctgcgtgctccgg 156
|||||| || ||||| |||||||||||||| || ||| | | || ||| ||||||||
Sbjct: 329 cggcaagggctgcggctcctgctaccagatacgatgccaaaacaacgatgcctgctccgg 388
Query: 157 cgtggcggagacggtgatcatcacggacatgaactactacccggtggccccctaccactt 216
| | ||||||||||||||||| ||||||||||||||||| ||| || || |||||
Sbjct: 389 caaccctgagacggtgatcatcactgacatgaactactaccccgtgtccaagtatcactt 448
Query: 217 cgacctgagcggcactgccttcggggccatggcaaaagacgagcacaacgacgagctaag 276
|||||| |||||||| || ||||| |||||||| || || | || ||||||||| |
Sbjct: 449 cgacctcagcggcacggcgttcggcgccatggccaagcccggccgcagcgacgagctccg 508
Query: 277 gcacgcaggaatcatcgacatccagttcaagagggttccctgccagtaccctggtctgac 336
||||| || |||||||||||||||||||||||||| |||||| | ||||| || | ||
Sbjct: 509 ccacgccggcatcatcgacatccagttcaagagggtgccctgcaactaccccgggcagaa 568
Query: 337 ggtgaccttccacatcgagcgcggctccaaccccaactacctggcggtgct 387
|||||| |||||| | ||| |||||||||||| |||| | ||||||||
Sbjct: 569 ggtgacgttccacgtggaggagggctccaaccccgtctacttcgcggtgct 619
>gb|CW061064.1|CW061064 104_304_10520199_114_30143 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10520199, DNA
sequence
Length = 673
Score = 163 bits (82), Expect = 4e-038
Identities = 208/250 (83%)
Strand = Plus / Minus
Query: 149 tgctccggcgtggcggagacggtgatcatcacggacatgaactactacccggtggccccc 208
|||||||||| || | |||||||||| |||||||||||||||||||||||||||||
Sbjct: 301 tgctccggcgaggtgaagacggtgatgatcacggacatgaactactacccggtggcgagg 242
Query: 209 taccacttcgacctgagcggcactgccttcggggccatggcaaaagacgagcacaacgac 268
||||||||||||||||||||||| || |||||| ||||||| | | || |||||||
Sbjct: 241 taccacttcgacctgagcggcacggcgttcgggtccatggcgaggccggggctcaacgac 182
Query: 269 gagctaaggcacgcaggaatcatcgacatccagttcaagagggttccctgccagtaccct 328
|||| ||||||| || ||||||||||||||||||| |||||| ||||| | |||
Sbjct: 181 aagctccggcacgcgggcatcatcgacatccagttcaggagggtggcctgcaacaaccgg 122
Query: 329 ggtctgacggtgaccttccacatcgagcgcggctccaaccccaactacctggcggtgctg 388
|| || || || | ||||||| | || |||||||||||||||||||||||||||||||
Sbjct: 121 gggctcaccgtcaacttccacgtgcaggccggctccaaccccaactacctggcggtgctg 62
Query: 389 gtggagtacg 398
||||||||||
Sbjct: 61 gtggagtacg 52
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 373,520
Number of Sequences: 832831
Number of extensions: 373520
Number of successful extensions: 132327
Number of sequences better than 0.5: 786
Number of HSP's better than 0.5 without gapping: 766
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 128513
Number of HSP's gapped (non-prelim): 2912
length of query: 912
length of database: 491,359,669
effective HSP length: 20
effective length of query: 892
effective length of database: 474,703,049
effective search space: 423435119708
effective search space used: 423435119708
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)