BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 9232502.2.1
(560 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD220204.1|CD220204 CCC1_65_F04.g1_A007 Callus culture/c... 662 0.0
gb|CD227370.1|CD227370 CCC1_50_H02.g1_A007 Callus culture/c... 662 0.0
gb|CD228566.1|CD228566 CCC1_8_A11.g1_A007 Callus culture/ce... 662 0.0
gb|CD426884.1|CD426884 SA1_25_E08.g1_A002 Salicylic acid-tr... 662 0.0
gb|CF428902.1|CF428902 PH1_18_B03.g1_A002 Phosphorous-defic... 662 0.0
gb|CN128674.1|CN128674 RHOH1_30_H12.g1_A002 Acid- and alkal... 662 0.0
gb|CN131041.1|CN131041 RHOH1_45_A10.g1_A002 Acid- and alkal... 662 0.0
gb|CN135268.1|CN135268 OX1_31_D11.g1_A002 Oxidatively-stres... 662 0.0
gb|CN143540.1|CN143540 WOUND1_16_H08.g1_A002 Wounded leaves... 662 0.0
gb|CD205202.1|CD205202 HS1_12_C08.g1_A012 Heat-shocked seed... 654 0.0
gb|CF429994.1|CF429994 PH1_25_F05.g1_A002 Phosphorous-defic... 654 0.0
gb|CF434017.1|CF434017 NIT1_31_C05.g1_A002 Nitrogen-deficie... 654 0.0
gb|CN124884.1|CN124884 RHOH1_7_C01.g1_A002 Acid- and alkali... 654 0.0
gb|CN146819.1|CN146819 WOUND1_43_H09.g1_A002 Wounded leaves... 654 0.0
gb|CF433038.1|CF433038 NIT1_20_C09.g1_A002 Nitrogen-deficie... 638 0.0
gb|CN138766.1|CN138766 OX1_13_F11.g1_A002 Oxidatively-stres... 638 0.0
gb|CN141611.1|CN141611 OX1_52_F06.g1_A002 Oxidatively-stres... 630 e-179
gb|BF585592.1|BF585592 FM1_23_C06.b1_A003 Floral-Induced Me... 624 e-177
gb|CN125499.1|CN125499 RHOH1_11_A10.g1_A002 Acid- and alkal... 613 e-174
gb|BE126214.1|BE126214 DG1_68_C12.b1_A002 Dark Grown 1 (DG1... 603 e-171
gb|CD230388.1|CD230388 SS1_43_H05.g1_A012 Salt-stressed see... 597 e-169
gb|CN123949.1|CN123949 RHOH1_1_E07.g1_A002 Acid- and alkali... 583 e-165
gb|CN147212.1|CN147212 WOUND1_48_G10.b1_A002 Wounded leaves... 567 e-160
gb|CN147298.1|CN147298 WOUND1_48_G10.g1_A002 Wounded leaves... 567 e-160
gb|CD427825.1|CD427825 ETH1_34_D11.g1_A002 Ethylene-treated... 498 e-139
gb|BE357231.1|BE357231 DG1_147_A06.g1_A002 Dark Grown 1 (DG... 484 e-135
gb|AW677494.1|AW677494 DG1_8_A02.b1_A002 Dark Grown 1 (DG1)... 472 e-131
gb|BE358555.1|BE358555 DG1_31_C01.b1_A002 Dark Grown 1 (DG1... 464 e-129
gb|BG559298.1|BG559298 RHIZ2_53_B05.b1_A003 Rhizome2 (RHIZ2... 464 e-129
gb|CD205813.1|CD205813 HS1_18_C07.g1_A012 Heat-shocked seed... 444 e-123
gb|AW676898.1|AW676898 DG1_2_H12.b1_A002 Dark Grown 1 (DG1)... 442 e-122
gb|BI075941.1|BI075941 IP1_23_C05.b1_A002 Immature pannicle... 369 e-100
gb|CF430499.1|CF430499 PH1_28_E08.g1_A002 Phosphorous-defic... 359 2e-097
gb|BG558820.1|BG558820 RHIZ2_57_A12.b1_A003 Rhizome2 (RHIZ2... 333 1e-089
gb|BG465799.1|BG465799 RHIZ2_48_G04.b1_A003 Rhizome2 (RHIZ2... 309 1e-082
gb|BE357184.1|BE357184 DG1_147_A06.b1_A002 Dark Grown 1 (DG... 289 1e-076
gb|BG051235.1|BG051235 FM1_57_H07.b1_A003 Floral-Induced Me... 289 1e-076
gb|CD235470.1|CD235470 SS1_29_B02.g1_A012 Salt-stressed see... 278 5e-073
gb|CD207279.1|CD207279 HS1_62_E06.g1_A012 Heat-shocked seed... 268 5e-070
gb|BG560203.1|BG560203 RHIZ2_71_E08.b1_A003 Rhizome2 (RHIZ2... 264 8e-069
gb|BG241878.1|BG241878 RHIZ2_51_G08.b1_A003 Rhizome2 (RHIZ2... 250 1e-064
gb|BE355227.1|BE355227 DG1_113_B08.b1_A002 Dark Grown 1 (DG... 232 3e-059
gb|BE361931.1|BE361931 DG1_83_E03.b1_A002 Dark Grown 1 (DG1... 232 3e-059
gb|CN124812.1|CN124812 RHOH1_7_C01.b1_A002 Acid- and alkali... 232 3e-059
gb|CW096483.1|CW096483 104_462_11001918_148_34355_029 Sorgh... 204 6e-051
gb|CF430445.1|CF430445 PH1_28_E08.b1_A002 Phosphorous-defic... 168 3e-040
gb|CN146737.1|CN146737 WOUND1_43_H09.b1_A002 Wounded leaves... 168 3e-040
gb|CN143456.1|CN143456 WOUND1_16_H08.b1_A002 Wounded leaves... 149 3e-034
gb|BE361997.1|BE361997 DG1_83_E03.g1_A002 Dark Grown 1 (DG1... 105 4e-021
gb|BE358712.1|BE358712 DG1_31_C01.g1_A002 Dark Grown 1 (DG1... 72 6e-011
gb|CL154628.1|CL154628 104_340_10781550_116_31470_030 Sorgh... 56 4e-006
gb|CF432589.1|CF432589 NIT1_17_E01.g1_A002 Nitrogen-deficie... 54 1e-005
gb|CL147735.1|CL147735 104_327_10592599_116_31781_107 Sorgh... 52 6e-005
gb|CW096482.1|CW096482 104_462_11001918_116_34351_029 Sorgh... 52 6e-005
gb|CW390707.1|CW390707 fsbb001f076h18k0 Sorghum methylation... 52 6e-005
gb|BE360972.1|BE360972 DG1_68_C12.g1_A002 Dark Grown 1 (DG1... 50 2e-004
gb|BZ341532.1|BZ341532 ic46a07.b1 WGS-SbicolorF (JM107 adap... 42 0.054
gb|BZ341533.1|BZ341533 ic46a07.g1 WGS-SbicolorF (JM107 adap... 42 0.054
gb|CL188049.1|CL188049 104_404_10901323_114_32444_078 Sorgh... 42 0.054
gb|CW030122.1|CW030122 104_258_10500073_116_30404 Sorghum m... 42 0.054
gb|CW041795.1|CW041795 104_275_10506752_114_30284 Sorghum m... 42 0.054
gb|CW041796.1|CW041796 104_275_10506752_115_30285 Sorghum m... 42 0.054
gb|CW273083.1|CW273083 104_745_11403708_116_35718_040 Sorgh... 42 0.054
gb|CW275353.1|CW275353 104_748_11404918_148_35383_085 Sorgh... 42 0.054
gb|CW284336.1|CW284336 104_761_11409724_148_35496_014 Sorgh... 42 0.054
gb|CW463152.1|CW463152 fsbb001f211j19k0 Sorghum methylation... 42 0.054
gb|CW495810.1|CW495810 fsbb001f287l23f0 Sorghum methylation... 42 0.054
gb|BE360514.1|BE360514 DG1_64_H06.b1_A002 Dark Grown 1 (DG1... 42 0.054
gb|BG411856.1|BG411856 OV2_39_A04.g1_A002 Ovary 2 (OV2) Sor... 42 0.054
gb|BZ781281.1|BZ781281 ii26a12.g1 WGS-SbicolorF (DH5a methy... 40 0.21
gb|CW188270.1|CW188270 104_608_11172941_148_36734_031 Sorgh... 40 0.21
gb|CW259591.1|CW259591 104_726_11228510_148_35187_063 Sorgh... 40 0.21
gb|CW394266.1|CW394266 fsbb001f081m06k0 Sorghum methylation... 40 0.21
gb|AW672215.1|AW672215 LG1_358_A10.b1_A002 Light Grown 1 (L... 40 0.21
gb|AW680385.1|AW680385 WS1_52_D05.g1_A002 Water-stressed 1 ... 40 0.21
gb|BF422251.1|BF422251 FM1_13_A11.b1_A003 Floral-Induced Me... 40 0.21
gb|BF656199.1|BF656199 FM1_44_C04.b1_A003 Floral-Induced Me... 40 0.21
gb|BG051188.1|BG051188 FM1_57_D05.b1_A003 Floral-Induced Me... 40 0.21
gb|BG102343.1|BG102343 RHIZ2_22_F04.b1_A003 Rhizome2 (RHIZ2... 40 0.21
gb|CD461431.1|CD461431 SA1_22_E11.b2_A002 Salicylic acid-tr... 40 0.21
>gb|CD220204.1|CD220204 CCC1_65_F04.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_65_F04_A007 5', mRNA sequence
Length = 657
Score = 662 bits (334), Expect = 0.0
Identities = 441/476 (92%), Gaps = 3/476 (0%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 613 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 554
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 553 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 494
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 493 ggccggagccctgcgtgttgaccttgccgtcgagggtgccgagcatggagaggctgtaga 434
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttca 240
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 433 agcgcggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttga 374
Query: 241 gcacgcccgccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgt 300
||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 373 gcacgccggccttcatcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgt 314
Query: 301 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 313 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagct 254
Query: 361 gccggaactcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccg 420
|| |||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||
Sbjct: 253 gcttgaactcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccg 194
Query: 421 cgtccgccgcgcccgcgcccgagcccgacgacgacgccggccctggcgcggccttc 476
||||||||||||| ||||||| |||||||| || || |||||||||||||||
Sbjct: 193 cgtccgccgcgccgccgcccga---cgacgacgctgctggacctggcgcggccttc 141
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 86 gacgacgccaggagcaccaacaggatggcgaggcg 52
>gb|CD227370.1|CD227370 CCC1_50_H02.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_50_H02_A007 5', mRNA sequence
Length = 625
Score = 662 bits (334), Expect = 0.0
Identities = 441/476 (92%), Gaps = 3/476 (0%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 602 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 543
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 542 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 483
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 482 ggccggagccctgcgtgttgaccttgccgtcgagggtgccgagcatggagaggctgtaga 423
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttca 240
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 422 agcgcggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttga 363
Query: 241 gcacgcccgccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgt 300
||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 362 gcacgccggccttcatcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgt 303
Query: 301 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 302 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagct 243
Query: 361 gccggaactcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccg 420
|| |||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||
Sbjct: 242 gcttgaactcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccg 183
Query: 421 cgtccgccgcgcccgcgcccgagcccgacgacgacgccggccctggcgcggccttc 476
||||||||||||| ||||||| |||||||| || || |||||||||||||||
Sbjct: 182 cgtccgccgcgccgccgcccga---cgacgacgctgctggacctggcgcggccttc 130
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 75 gacgacgccaggagcaccaacaggatggcgaggcg 41
>gb|CD228566.1|CD228566 CCC1_8_A11.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_8_A11_A007 5', mRNA sequence
Length = 639
Score = 662 bits (334), Expect = 0.0
Identities = 441/476 (92%), Gaps = 3/476 (0%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 598 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 539
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 538 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 479
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 478 ggccggagccctgcgtgttgaccttgccgtcgagggtgccgagcatggagaggctgtaga 419
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttca 240
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 418 agcgtggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttga 359
Query: 241 gcacgcccgccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgt 300
||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 358 gcacgccggccttcatcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgt 299
Query: 301 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 298 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagct 239
Query: 361 gccggaactcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccg 420
|| |||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||
Sbjct: 238 gcttgaactcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccg 179
Query: 421 cgtccgccgcgcccgcgcccgagcccgacgacgacgccggccctggcgcggccttc 476
||||||||||||| ||||||| |||||||| || || |||||||||||||||
Sbjct: 178 cgtccgccgcgccgccgcccga---cgacgacgctgctggacctggcgcggccttc 126
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||| ||||||||||
Sbjct: 71 gacgacgccaggagcaccaacagggtggcgaggcg 37
>gb|CD426884.1|CD426884 SA1_25_E08.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_25_E08_A002 5', mRNA sequence
Length = 647
Score = 662 bits (334), Expect = 0.0
Identities = 441/476 (92%), Gaps = 3/476 (0%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 614 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 555
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 554 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 495
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 494 ggccggagccctgcgtgttgaccttgccgtcgagggtgccgagcatggagaggctgtaga 435
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttca 240
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 434 agcgcggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttga 375
Query: 241 gcacgcccgccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgt 300
||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 374 gcacgccggccttcatcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgt 315
Query: 301 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 314 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagct 255
Query: 361 gccggaactcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccg 420
|| |||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||
Sbjct: 254 gcttgaactcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccg 195
Query: 421 cgtccgccgcgcccgcgcccgagcccgacgacgacgccggccctggcgcggccttc 476
||||||||||||| ||||||| |||||||| || || |||||||||||||||
Sbjct: 194 cgtccgccgcgccgccgcccga---cgacgacgctgctggacctggcgcggccttc 142
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 87 gacgacgccaggagcaccaacaggatggcgaggcg 53
>gb|CF428902.1|CF428902 PH1_18_B03.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_18_B03_A002 5', mRNA sequence
Length = 616
Score = 662 bits (334), Expect = 0.0
Identities = 441/476 (92%), Gaps = 3/476 (0%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 608 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 549
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 548 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 489
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 488 ggccggagccctgcgtgttgaccttgccgtcgagggtgccgagcatggagaggctgtaga 429
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttca 240
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 428 agcgcggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttga 369
Query: 241 gcacgcccgccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgt 300
||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 368 gcacgccggccttcatcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgt 309
Query: 301 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 308 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagct 249
Query: 361 gccggaactcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccg 420
|| |||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||
Sbjct: 248 gcttgaactcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccg 189
Query: 421 cgtccgccgcgcccgcgcccgagcccgacgacgacgccggccctggcgcggccttc 476
||||||||||||| ||||||| |||||||| || || |||||||||||||||
Sbjct: 188 cgtccgccgcgccgccgcccga---cgacgacgctgctggacctggcgcggccttc 136
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 81 gacgacgccaggagcaccaacaggatggcgaggcg 47
>gb|CN128674.1|CN128674 RHOH1_30_H12.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_30_H12_A002 5', mRNA sequence
Length = 824
Score = 662 bits (334), Expect = 0.0
Identities = 441/476 (92%), Gaps = 3/476 (0%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 580 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 521
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 520 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 461
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 460 ggccggagccctgcgtgttgaccttgccgtcgagggtgccgagcatggagaggctgtaga 401
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttca 240
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 400 agcgcggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttga 341
Query: 241 gcacgcccgccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgt 300
||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 340 gcacgccggccttcatcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgt 281
Query: 301 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 280 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagct 221
Query: 361 gccggaactcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccg 420
|| |||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||
Sbjct: 220 gcttgaactcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccg 161
Query: 421 cgtccgccgcgcccgcgcccgagcccgacgacgacgccggccctggcgcggccttc 476
||||||||||||| ||||||| |||||||| || || |||||||||||||||
Sbjct: 160 cgtccgccgcgccgccgcccga---cgacgacgctgctggacctggcgcggccttc 108
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 53 gacgacgccaggagcaccaacaggatggcgaggcg 19
>gb|CN131041.1|CN131041 RHOH1_45_A10.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_45_A10_A002 5', mRNA sequence
Length = 843
Score = 662 bits (334), Expect = 0.0
Identities = 441/476 (92%), Gaps = 3/476 (0%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 580 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 521
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 520 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 461
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 460 ggccggagccctgcgtgttgaccttgccgtcgagggtgccgagcatggagaggctgtaga 401
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttca 240
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 400 agcgcggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttga 341
Query: 241 gcacgcccgccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgt 300
||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 340 gcacgccggccttcatcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgt 281
Query: 301 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 280 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagct 221
Query: 361 gccggaactcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccg 420
|| |||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||
Sbjct: 220 gcttgaactcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccg 161
Query: 421 cgtccgccgcgcccgcgcccgagcccgacgacgacgccggccctggcgcggccttc 476
||||||||||||| ||||||| |||||||| || || |||||||||||||||
Sbjct: 160 cgtccgccgcgccgccgcccga---cgacgacgctgctggacctggcgcggccttc 108
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 53 gacgacgccaggagcaccaacaggatggcgaggcg 19
>gb|CN135268.1|CN135268 OX1_31_D11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_31_D11_A002 5', mRNA sequence
Length = 735
Score = 662 bits (334), Expect = 0.0
Identities = 441/476 (92%), Gaps = 3/476 (0%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 591 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 532
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 531 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 472
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 471 ggccggagccctgcgtgttgaccttgccgtcgagggtgccgagcatggagaggctgtaga 412
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttca 240
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 411 agcgcggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttga 352
Query: 241 gcacgcccgccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgt 300
||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 351 gcacgccggccttcatcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgt 292
Query: 301 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 291 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagct 232
Query: 361 gccggaactcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccg 420
|| |||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||
Sbjct: 231 gcttgaactcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccg 172
Query: 421 cgtccgccgcgcccgcgcccgagcccgacgacgacgccggccctggcgcggccttc 476
||||||||||||| ||||||| |||||||| || || |||||||||||||||
Sbjct: 171 cgtccgccgcgccgccgcccga---cgacgacgctgctggacctggcgcggccttc 119
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 64 gacgacgccaggagcaccaacaggatggcgaggcg 30
>gb|CN143540.1|CN143540 WOUND1_16_H08.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_16_H08_A002 5', mRNA sequence
Length = 761
Score = 662 bits (334), Expect = 0.0
Identities = 441/476 (92%), Gaps = 3/476 (0%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 586 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 527
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 526 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 467
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 466 ggccggagccctgcgtgttgaccttgccgtcgagggtgccgagcatggagaggctgtaga 407
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttca 240
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 406 agcgcggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttga 347
Query: 241 gcacgcccgccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgt 300
||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 346 gcacgccggccttcatcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgt 287
Query: 301 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 286 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagct 227
Query: 361 gccggaactcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccg 420
|| |||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||
Sbjct: 226 gcttgaactcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccg 167
Query: 421 cgtccgccgcgcccgcgcccgagcccgacgacgacgccggccctggcgcggccttc 476
||||||||||||| ||||||| |||||||| || || |||||||||||||||
Sbjct: 166 cgtccgccgcgccgccgcccga---cgacgacgctgctggacctggcgcggccttc 114
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 59 gacgacgccaggagcaccaacaggatggcgaggcg 25
>gb|CD205202.1|CD205202 HS1_12_C08.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_12_C08_A012 5', mRNA sequence
Length = 691
Score = 654 bits (330), Expect = 0.0
Identities = 440/476 (92%), Gaps = 3/476 (0%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 614 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 555
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 554 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 495
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 494 ggccggagccctgcgtgttgaccttgccgtcgagggtgccgagcatggagaggctgtaga 435
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttca 240
| || |||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 434 agcgcggcagcacgcagtagagcgccatctggatctgctcctgcggcgacagcccgttga 375
Query: 241 gcacgcccgccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgt 300
||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 374 gcacgccggccttcatcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgt 315
Query: 301 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 314 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagct 255
Query: 361 gccggaactcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccg 420
|| |||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||
Sbjct: 254 gcttgaactcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccg 195
Query: 421 cgtccgccgcgcccgcgcccgagcccgacgacgacgccggccctggcgcggccttc 476
||||||||||||| ||||||| |||||||| || || |||||||||||||||
Sbjct: 194 cgtccgccgcgccgccgcccga---cgacgacgctgctggacctggcgcggccttc 142
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 87 gacgacgccaggagcaccaacaggatggcgaggcg 53
>gb|CF429994.1|CF429994 PH1_25_F05.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_F05_A002 5', mRNA sequence
Length = 764
Score = 654 bits (330), Expect = 0.0
Identities = 440/476 (92%), Gaps = 3/476 (0%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 601 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 542
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 541 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 482
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
|||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 481 ggccggggccctgcgtgttgaccttgccgtcgagggtgccgagcatggagaggctgtaga 422
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttca 240
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 421 agcgcggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttga 362
Query: 241 gcacgcccgccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgt 300
||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 361 gcacgccggccttcatcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgt 302
Query: 301 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 301 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagct 242
Query: 361 gccggaactcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccg 420
|| |||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||
Sbjct: 241 gcttgaactcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccg 182
Query: 421 cgtccgccgcgcccgcgcccgagcccgacgacgacgccggccctggcgcggccttc 476
||||||||||||| ||||||| |||||||| || || |||||||||||||||
Sbjct: 181 cgtccgccgcgccgccgcccga---cgacgacgctgctggacctggcgcggccttc 129
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 74 gacgacgccaggagcaccaacaggatggcgaggcg 40
>gb|CF434017.1|CF434017 NIT1_31_C05.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_31_C05_A002 5', mRNA sequence
Length = 740
Score = 654 bits (330), Expect = 0.0
Identities = 440/476 (92%), Gaps = 3/476 (0%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 588 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 529
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| || | ||||||||||
Sbjct: 528 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgcaaggcccgtcgt 469
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 468 ggccggagccctgcgtgttgaccttgccgtcgagggtgccgagcatggagaggctgtaga 409
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttca 240
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 408 agcgcggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttga 349
Query: 241 gcacgcccgccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgt 300
||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 348 gcacgccggccttcatcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgt 289
Query: 301 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 288 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagct 229
Query: 361 gccggaactcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccg 420
|| |||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||
Sbjct: 228 gcttgaactcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccg 169
Query: 421 cgtccgccgcgcccgcgcccgagcccgacgacgacgccggccctggcgcggccttc 476
||||||||||||| ||||||| |||||||| || || |||||||||||||||
Sbjct: 168 cgtccgccgcgccgccgcccga---cgacgacgctgctggacctggcgcggccttc 116
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 61 gacgacgccaggagcaccaacaggatggcgaggcg 27
>gb|CN124884.1|CN124884 RHOH1_7_C01.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_7_C01_A002 5', mRNA sequence
Length = 819
Score = 654 bits (330), Expect = 0.0
Identities = 440/476 (92%), Gaps = 3/476 (0%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 748 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 689
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 688 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 629
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 628 ggccggagccctgcgtgttgaccttgccgtcgagggtgccgagcatggagaggctgtaga 569
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttca 240
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 568 agcgcggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttga 509
Query: 241 gcacgcccgccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgt 300
||||||| ||||||||||||||||| || | ||||| |||||||||||||||||||||||
Sbjct: 508 gcacgccggccttcatcttgtcgaacgccgtgttggagggcgccatgatggtcagcccgt 449
Query: 301 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 448 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagct 389
Query: 361 gccggaactcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccg 420
|| |||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||
Sbjct: 388 gcttgaactcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccg 329
Query: 421 cgtccgccgcgcccgcgcccgagcccgacgacgacgccggccctggcgcggccttc 476
||||||||||||| ||||||| |||||||| || || |||||||||||||||
Sbjct: 328 cgtccgccgcgccgccgcccga---cgacgacgctgctggacctggcgcggccttc 276
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 221 gacgacgccaggagcaccaacaggatggcgaggcg 187
>gb|CN146819.1|CN146819 WOUND1_43_H09.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_43_H09_A002 5', mRNA sequence
Length = 751
Score = 654 bits (330), Expect = 0.0
Identities = 440/476 (92%), Gaps = 3/476 (0%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 584 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 525
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 524 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 465
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
||||||| |||||||||||||||| |||| |||||||||||||||||| ||||||||||
Sbjct: 464 ggccggagccctgcgtgttgacctcgccgtcgagggtgccgagcatggagaggctgtaga 405
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttca 240
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 404 agcgcggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttga 345
Query: 241 gcacgcccgccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgt 300
||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 344 gcacgccggccttcatcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgt 285
Query: 301 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 284 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagct 225
Query: 361 gccggaactcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccg 420
|| |||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||
Sbjct: 224 gcttgaactcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccg 165
Query: 421 cgtccgccgcgcccgcgcccgagcccgacgacgacgccggccctggcgcggccttc 476
||||||||||||| ||||||| |||||||| || || |||||||||||||||
Sbjct: 164 cgtccgccgcgccgccgcccga---cgacgacgctgctggacctggcgcggccttc 112
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 57 gacgacgccaggagcaccaacaggatggcgaggcg 23
>gb|CF433038.1|CF433038 NIT1_20_C09.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_20_C09_A002 5', mRNA sequence
Length = 714
Score = 638 bits (322), Expect = 0.0
Identities = 409/437 (93%), Gaps = 1/437 (0%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 612 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 553
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 552 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 493
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 492 ggccggagccctgcgtgttgaccttgccgtcgagggtgccgagcatggagaggctgtaga 433
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttca 240
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 432 agcgcggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttga 373
Query: 241 gcacgcccgccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgt 300
||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 372 gcacgccggccttcatcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgt 313
Query: 301 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 312 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagct 253
Query: 361 gccggaactcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccg 420
|| |||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||
Sbjct: 252 gcttgaactcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccg 193
Query: 421 cgtcc-gccgcgcccgc 436
||||| |||||| ||||
Sbjct: 192 cgtccngccgcgnccgc 176
>gb|CN138766.1|CN138766 OX1_13_F11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_13_F11_A002 5', mRNA sequence
Length = 788
Score = 638 bits (322), Expect = 0.0
Identities = 438/476 (92%), Gaps = 3/476 (0%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 602 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 543
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 542 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 483
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
||||||| ||||||||||||||||||||| |||||||||||||||| | | |||||||
Sbjct: 482 ggccggagccctgcgtgttgaccttgccgtcgagggtgccgagcatgaaaaaactgtaga 423
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttca 240
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 422 agcgcggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttga 363
Query: 241 gcacgcccgccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgt 300
||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 362 gcacgccggccttcatcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgt 303
Query: 301 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 302 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagct 243
Query: 361 gccggaactcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccg 420
|| |||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||
Sbjct: 242 gcttgaactcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccg 183
Query: 421 cgtccgccgcgcccgcgcccgagcccgacgacgacgccggccctggcgcggccttc 476
||||||||||||| ||||||| |||||||| || || |||||||||||||||
Sbjct: 182 cgtccgccgcgccgccgcccga---cgacgacgctgctggacctggcgcggccttc 130
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 75 gacgacgccaggagcaccaacaggatggcgaggcg 41
>gb|CN141611.1|CN141611 OX1_52_F06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_52_F06_A002 5', mRNA sequence
Length = 785
Score = 630 bits (318), Expect = e-179
Identities = 437/476 (91%), Gaps = 3/476 (0%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 600 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 541
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 540 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 481
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
||||||| ||||||||||||||||| ||| |||||||||||||||||| ||||||||||
Sbjct: 480 ggccggagccctgcgtgttgaccttcccgtcgagggtgccgagcatggagaggctgtaga 421
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttca 240
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 420 agcgcggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttga 361
Query: 241 gcacgcccgccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgt 300
||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 360 gcacgccggccttcatcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgt 301
Query: 301 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagct 360
||||||||||||||||||||||| ||||||||| |||||||||||||||||| | |||||
Sbjct: 300 tgtagctgtccgtcagctgcgcgctgatctgcgcgtccacgcgcgtgtcgtggagcagct 241
Query: 361 gccggaactcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccg 420
|| |||||||||||||||||||||| | ||||||||||| | ||||||||| |||||||
Sbjct: 240 gcttgaactcgctgaactgctcgtccctgagcgccttgttgatgtccgtcggtggcgccg 181
Query: 421 cgtccgccgcgcccgcgcccgagcccgacgacgacgccggccctggcgcggccttc 476
||||||||||||| ||||||| |||||||| || || |||||||||||||||
Sbjct: 180 cgtccgccgcgccgccgcccga---cgacgacgctgctggacctggcgcggccttc 128
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 73 gacgacgccaggagcaccaacaggatggcgaggcg 39
>gb|BF585592.1|BF585592 FM1_23_C06.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 452
Score = 624 bits (315), Expect = e-177
Identities = 399/427 (93%)
Strand = Plus / Minus
Query: 16 ggaagtccttgctgacggggctgcccagcagcatccagttcacccccgtggacacgttga 75
|||| ||||||||||||||||||||||||||||||||||| || |||||||||| |||||
Sbjct: 451 ggaattccttgctgacggggctgcccagcagcatccagttgacgcccgtggacatgttga 392
Query: 76 cgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgtggccggacccctgcg 135
||||||| ||||||||||||||||||||| |||| ||||||||||||||||| |||||||
Sbjct: 391 cgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgtggccggagccctgcg 332
Query: 136 tgttgaccttgccgctgagggtgccgagcatggacaggctgtagaaccggggcagcacgc 195
|||||||||||||| |||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 331 tgttgaccttgccgtcgagggtgccgagcatggagaggctgtagaagcgcggcagcacgc 272
Query: 196 agtagagcaccatctggatctgctcctgcggcgacagcccgttcagcacgcccgccttca 255
||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 271 agtagagtaccatctggatctgctcctgcggcgacagcccgttgagcacgccggccttca 212
Query: 256 tcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgttgtagctgtccgtca 315
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 tcttgtcgaacgccgcgttggtgggcgccatgatggtcagcccgttgtagctgtccgtca 152
Query: 316 gctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagctgccggaactcgctga 375
||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||
Sbjct: 151 gctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagctgcttgaactcgctga 92
Query: 376 actgctcgtccttcagcgccttgttcacgtccgtcggcggcgccgcgtccgccgcgcccg 435
||||||||||||| ||||||||||| | ||||||||| ||||||||||||||||||||
Sbjct: 91 actgctcgtccttgagcgccttgttgatgtccgtcggtggcgccgcgtccgccgcgccgc 32
Query: 436 cgcccga 442
|||||||
Sbjct: 31 cgcccga 25
>gb|CN125499.1|CN125499 RHOH1_11_A10.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_11_A10_A002 5', mRNA sequence
Length = 767
Score = 613 bits (309), Expect = e-174
Identities = 399/429 (93%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 486 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 427
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||| ||
Sbjct: 426 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgttgt 367
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
||||||| ||||||||||||||||||| | |||||||||||||||||| ||||||||||
Sbjct: 366 ggccggagccctgcgtgttgaccttgctgtcgagggtgccgagcatggagaggctgtaga 307
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttca 240
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 306 agcgcggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttga 247
Query: 241 gcacgcccgccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgt 300
||||||| |||||||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 246 gcacgccgaccttcatcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgt 187
Query: 301 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 186 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagct 127
Query: 361 gccggaactcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccg 420
|| |||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||
Sbjct: 126 gcttgaactcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccg 67
Query: 421 cgtccgccg 429
||||||||
Sbjct: 66 tgtccgccg 58
>gb|BE126214.1|BE126214 DG1_68_C12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 570
Score = 603 bits (304), Expect = e-171
Identities = 408/442 (92%), Gaps = 3/442 (0%)
Strand = Plus / Minus
Query: 35 gctgcccagcagcatccagttcacccccgtggacacgttgacgttgttccccgaccgctt 94
||||||||||||||||||||| || |||||||||| |||||||||||| |||||||||||
Sbjct: 570 gctgcccagcagcatccagttgacgcccgtggacatgttgacgttgttgcccgaccgctt 511
Query: 95 gatgtcgtacctgtagggcccgtcgtggccggacccctgcgtgttgaccttgccgctgag 154
|||||||||| |||| ||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 510 gatgtcgtacttgtaaggcccgtcgtggccggagccctgcgtgttgaccttgccgtcgag 451
Query: 155 ggtgccgagcatggacaggctgtagaaccggggcagcacgcagtagagcaccatctggat 214
||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 450 ggtgccgagcatggagaggctgtagaagcgcggcagcacgcagtagagcaccatctggat 391
Query: 215 ctgctcctgcggcgacagcccgttcagcacgcccgccttcatcttgtcgaaggcggcgtt 274
|||||||||||||||||||||||| |||||||| ||||||||||||||||| || | |||
Sbjct: 390 ctgctcctgcggcgacagcccgttgagcacgccggccttcatcttgtcgaacgccgtgtt 331
Query: 275 ggtgggcgccatgatggtcagcccgttgtagctgtccgtcagctgcgcgttgatctgcgt 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ggtgggcgccatgatggtcagcccgttgtagctgtccgtcagctgcgcgttgatctgcgt 271
Query: 335 gtccacgcgcgtgtcgtgcaacagctgccggaactcgctgaactgctcgtccttcagcgc 394
|||||||||||||||||| | ||||||| |||||||||||||||||||||||| |||||
Sbjct: 270 gtccacgcgcgtgtcgtggagcagctgcttgaactcgctgaactgctcgtccttgagcgc 211
Query: 395 cttgttcacgtccgtcggcggcgccgcgtccgccgcgcccgcgcccgagcccgacgacga 454
|||||| | ||||||||| |||||||||||||||||||| ||||||| ||||||||
Sbjct: 210 cttgttgatgtccgtcggtggcgccgcgtccgccgcgccgccgcccga---cgacgacgc 154
Query: 455 cgccggccctggcgcggccttc 476
|| || |||||||||||||||
Sbjct: 153 tgctggacctggcgcggccttc 132
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 77 gacgacgccaggagcaccaacaggatggcgaggcg 43
>gb|CD230388.1|CD230388 SS1_43_H05.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_43_H05_A012 5', mRNA sequence
Length = 577
Score = 597 bits (301), Expect = e-169
Identities = 414/451 (91%), Gaps = 3/451 (0%)
Strand = Plus / Minus
Query: 26 gctgacggggctgcccagcagcatccagttcacccccgtggacacgttgacgttgttccc 85
|||||||||| ||||||||||||||||| || |||||||||| |||||||||||| ||
Sbjct: 577 gctgacggggtgccccagcagcatccagttgacgcccgtggacatgttgacgttgttgcc 518
Query: 86 cgaccgcttgatgtcgtacctgtagggcccgtcgtggccggacccctgcgtgttgacctt 145
||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||
Sbjct: 517 cgaccgcttgatgtcgtacttgtaaggcccgtcgtggccggagccctgcgtgttgacctt 458
Query: 146 gccgctgagggtgccgagcatggacaggctgtagaaccggggcagcacgcagtagagcac 205
|||| |||||||||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 457 gccgtcgagggtgccgagcatggagaggctgtagaagcgcggcagcacgcagtagagcac 398
Query: 206 catctggatctgctcctgcggcgacagcccgttcagcacgcccgccttcatcttgtcgaa 265
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 397 catctggatctgctcctgcggcgacagcccgttgagcacgccggccttcatcttgtcgaa 338
Query: 266 ggcggcgttggtgggcgccatgatggtcagcccgttgtagctgtccgtcagctgcgcgtt 325
|| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 cgccgtgttggtgggcgccatgatggtcagcccgttgtagctgtccgtcagctgcgcgtt 278
Query: 326 gatctgcgtgtccacgcgcgtgtcgtgcaacagctgccggaactcgctgaactgctcgtc 385
||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||
Sbjct: 277 gatctgcgtgtccacgcgcgtgtcgtggagcagctgcttgaactcgctgaactgctcgtc 218
Query: 386 cttcagcgccttgttcacgtccgtcggcggcgccgcgtccgccgcgcccgcgcccgagcc 445
||| ||||||||||| | ||||||||| |||||||||||||||||||| |||||||
Sbjct: 217 cttgagcgccttgttgatgtccgtcggtggcgccgcgtccgccgcgccgccgcccga--- 161
Query: 446 cgacgacgacgccggccctggcgcggccttc 476
|||||||| || || |||||||||||||||
Sbjct: 160 cgacgacgctgctggacctggcgcggccttc 130
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 75 gacgacgccaggagcaccaacaggatggcgaggcg 41
>gb|CN123949.1|CN123949 RHOH1_1_E07.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_1_E07_A002 5', mRNA sequence
Length = 591
Score = 583 bits (294), Expect = e-165
Identities = 404/440 (91%), Gaps = 3/440 (0%)
Strand = Plus / Minus
Query: 37 tgcccagcagcatccagttcacccccgtggacacgttgacgttgttccccgaccgcttga 96
||||||||||||||||||| || |||||||||| |||||||||||| |||||||||||||
Sbjct: 591 tgcccagcagcatccagttgacgcccgtggacatgttgacgttgttgcccgaccgcttga 532
Query: 97 tgtcgtacctgtagggcccgtcgtggccggacccctgcgtgttgaccttgccgctgaggg 156
|||||||| |||| ||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 531 tgtcgtacttgtaaggcccgtcgtggccggagccctgcgtgttgaccttgccgtcgaggg 472
Query: 157 tgccgagcatggacaggctgtagaaccggggcagcacgcagtagagcaccatctggatct 216
| ||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 471 tcccgagcatggagaggctgtagaagcgcggcagcacgcagtagagcaccatctggatct 412
Query: 217 gctcctgcggcgacagcccgttcagcacgcccgccttcatcttgtcgaaggcggcgttgg 276
|||||||||||||||||||||| |||||||| |||||||||||| |||| || | |||||
Sbjct: 411 gctcctgcggcgacagcccgttgagcacgccggccttcatcttgccgaacgccgtgttgg 352
Query: 277 tgggcgccatgatggtcagcccgttgtagctgtccgtcagctgcgcgttgatctgcgtgt 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tgggcgccatgatggtcagcccgttgtagctgtccgtcagctgcgcgttgatctgcgtgt 292
Query: 337 ccacgcgcgtgtcgtgcaacagctgccggaactcgctgaactgctcgtccttcagcgcct 396
|||||||||||||||| | ||||||| |||||||||||||||||||||||| |||||||
Sbjct: 291 ccacgcgcgtgtcgtggagcagctgcttgaactcgctgaactgctcgtccttgagcgcct 232
Query: 397 tgttcacgtccgtcggcggcgccgcgtccgccgcgcccgcgcccgagcccgacgacgacg 456
|||| | ||||||||| |||||||||||||||||||| ||||||| |||||||| |
Sbjct: 231 tgttgatgtccgtcggtggcgccgcgtccgccgcgccgccgcccga---cgacgacgctg 175
Query: 457 ccggccctggcgcggccttc 476
| || |||||||||||||||
Sbjct: 174 ctggacctggcgcggccttc 155
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 100 gacgacgccaggagcaccaacaggatggcgaggcg 66
>gb|CN147212.1|CN147212 WOUND1_48_G10.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_48_G10_A002 3', mRNA sequence
Length = 747
Score = 567 bits (286), Expect = e-160
Identities = 384/416 (92%), Gaps = 3/416 (0%)
Strand = Plus / Minus
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 549 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 490
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 489 ggccggagccctgcgtgttgaccttgccgtcgagggtgccgagcatggagaggctgtaga 430
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttca 240
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 429 agcgcggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttga 370
Query: 241 gcacgcccgccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgt 300
||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 369 gcacgccggccttcatcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgt 310
Query: 301 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 309 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagct 250
Query: 361 gccggaactcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccg 420
|| |||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||
Sbjct: 249 gcttgaactcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccg 190
Query: 421 cgtccgccgcgcccgcgcccgagcccgacgacgacgccggccctggcgcggccttc 476
||||||||||||| ||||||| |||||||| || || |||||||||||||||
Sbjct: 189 cgtccgccgcgccgccgcccga---cgacgacgctgctggacctggcgcggccttc 137
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 82 gacgacgccaggagcaccaacaggatggcgaggcg 48
>gb|CN147298.1|CN147298 WOUND1_48_G10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_48_G10_A002 5', mRNA sequence
Length = 761
Score = 567 bits (286), Expect = e-160
Identities = 384/416 (92%), Gaps = 3/416 (0%)
Strand = Plus / Minus
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 542 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 483
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 482 ggccggagccctgcgtgttgaccttgccgtcgagggtgccgagcatggagaggctgtaga 423
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttca 240
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 422 agcgcggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttga 363
Query: 241 gcacgcccgccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgt 300
||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 362 gcacgccggccttcatcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgt 303
Query: 301 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 302 tgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagct 243
Query: 361 gccggaactcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccg 420
|| |||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||
Sbjct: 242 gcttgaactcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccg 183
Query: 421 cgtccgccgcgcccgcgcccgagcccgacgacgacgccggccctggcgcggccttc 476
||||||||||||| ||||||| |||||||| || || |||||||||||||||
Sbjct: 182 cgtccgccgcgccgccgcccga---cgacgacgctgctggacctggcgcggccttc 130
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 75 gacgacgccaggagcaccaacaggatggcgaggcg 41
>gb|CD427825.1|CD427825 ETH1_34_D11.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_34_D11_A002 5', mRNA sequence
Length = 519
Score = 498 bits (251), Expect = e-139
Identities = 358/393 (91%), Gaps = 3/393 (0%)
Strand = Plus / Minus
Query: 84 cccgaccgcttgatgtcgtacctgtagggcccgtcgtggccggacccctgcgtgttgacc 143
|||||||||| |||||||||| |||| ||||||||||||||||| |||||||||||||||
Sbjct: 518 cccgaccgctggatgtcgtacttgtaaggcccgtcgtggccggagccctgcgtgttgacc 459
Query: 144 ttgccgctgagggtgccgagcatggacaggctgtagaaccggggcagcacgcagtagagc 203
|||||| |||||||||||||||||| || |||||||| || ||||||||||||||||||
Sbjct: 458 ttgccgtcgagggtgccgagcatggagagactgtagaagcgcggcagcacgcagtagagc 399
Query: 204 accatctggatctgctcctgcggcgacagcccgttcagcacgcccgccttcatcttgtcg 263
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 398 accatctggatctgctcctgcggcgacagcccgttgagcacgccggccttcatcttgtcg 339
Query: 264 aaggcggcgttggtgggcgccatgatggtcagcccgttgtagctgtccgtcagctgcgcg 323
|| || | |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 338 aacgccgtgttggtgggcgccatgatggtcagcccgctgtagctgtccgtcagctgcgcg 279
Query: 324 ttgatctgcgtgtccacgcgcgtgtcgtgcaacagctgccggaactcgctgaactgctcg 383
||||||| ||||||||||||||||||||| | ||||||| |||||||||||||||||||
Sbjct: 278 ttgatctacgtgtccacgcgcgtgtcgtggagcagctgcttgaactcgctgaactgctcg 219
Query: 384 tccttcagcgccttgttcacgtccgtcggcggcgccgcgtccgccgcgcccgcgcccgag 443
||||| ||||||||||| ||||||||| |||||||||||||||||||| |||||||
Sbjct: 218 tccttgagcgccttgttggtgtccgtcggtggcgccgcgtccgccgcgccgccgcccga- 160
Query: 444 cccgacgacgacgccggccctggcgcggccttc 476
|||||||| || || |||||||||||||||
Sbjct: 159 --cgacgacgctgctggacctggcgcggccttc 129
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 74 gacgacgccaggagcaccaacaggatggcgaggcg 40
>gb|BE357231.1|BE357231 DG1_147_A06.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 611
Score = 484 bits (244), Expect = e-135
Identities = 304/324 (93%)
Strand = Plus / Minus
Query: 89 ccgcttgatgtcgtacctgtagggcccgtcgtggccggacccctgcgtgttgaccttgcc 148
|||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 324 ccgcttgatgtcgtacttgtaaggcccgtcgtggccggagccctgcgtgttgaccttgcc 265
Query: 149 gctgagggtgccgagcatggacaggctgtagaaccggggcagcacgcagtagagcaccat 208
| |||||||||||||||||| ||||||||||| || |||||||||||||||||||||||
Sbjct: 264 gtcgagggtgccgagcatggagaggctgtagaagcgcggcagcacgcagtagagcaccat 205
Query: 209 ctggatctgctcctgcggcgacagcccgttcagcacgcccgccttcatcttgtcgaaggc 268
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 204 ctggatctgctcctgcggcgacagcccgttgagcacgccggccttcatcttgtcgaacgc 145
Query: 269 ggcgttggtgggcgccatgatggtcagcccgttgtagctgtccgtcagctgcgcgttgat 328
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 cgtgttggtgggcgccatgatggtcagcccgttgtagctgtccgtcagctgcgcgttgat 85
Query: 329 ctgcgtgtccacgcgcgtgtcgtgcaacagctgccggaactcgctgaactgctcgtcctt 388
|||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||
Sbjct: 84 ctgcgtgtccacgcgcgtgtcgtggagcagctgcttgaactcgctgaactgctcgtcctt 25
Query: 389 cagcgccttgttcacgtccgtcgg 412
||||||||||| | |||||||||
Sbjct: 24 gagcgccttgttgatgtccgtcgg 1
>gb|AW677494.1|AW677494 DG1_8_A02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 487
Score = 472 bits (238), Expect = e-131
Identities = 321/348 (92%), Gaps = 3/348 (0%)
Strand = Plus / Minus
Query: 129 ccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtagaaccggggc 188
||||||||||||||||||||| |||||||||||||||||| ||||||||||| || |||
Sbjct: 485 ccctgcgtgttgaccttgccgtcgagggtgccgagcatggagaggctgtagaagcgcggc 426
Query: 189 agcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttcagcacgccc 248
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 425 agcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttgagcacgccg 366
Query: 249 gccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgttgtagctg 308
||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||
Sbjct: 365 gccttcatcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgttgtagctg 306
Query: 309 tccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagctgccggaac 368
|||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||
Sbjct: 305 tccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagctgcttgaac 246
Query: 369 tcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccgcgtccgcc 428
|||||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||
Sbjct: 245 tcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccgcgtccgcc 186
Query: 429 gcgcccgcgcccgagcccgacgacgacgccggccctggcgcggccttc 476
||||| ||||||| |||||||| || || |||||||||||||||
Sbjct: 185 gcgccgccgcccga---cgacgacgctgctggacctggcgcggccttc 141
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 86 gacgacgccaggagcaccaacaggatggcgaggcg 52
>gb|BE358555.1|BE358555 DG1_31_C01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 558
Score = 464 bits (234), Expect = e-129
Identities = 288/306 (94%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 314 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 255
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 254 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 195
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 194 ggccggagccctgcgtgttgaccttgccgtcgagggtgccgagcatggagaggctgtaga 135
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttca 240
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 134 agcgcggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttga 75
Query: 241 gcacgcccgccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgt 300
||||||| ||||||||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 74 gcacgccggccttcatcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgt 15
Query: 301 tgtagc 306
||||||
Sbjct: 14 tgtagc 9
>gb|BG559298.1|BG559298 RHIZ2_53_B05.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 375
Score = 464 bits (234), Expect = e-129
Identities = 294/314 (93%)
Strand = Plus / Minus
Query: 129 ccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtagaaccggggc 188
||||||||||||||||||||| |||||||||||||||||| ||||||||||| || |||
Sbjct: 374 ccctgcgtgttgaccttgccgtcgagggtgccgagcatggagaggctgtagaagcgcggc 315
Query: 189 agcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgttcagcacgccc 248
|||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 314 agcacgcagtagagtaccatctggatctgctcctgcggcgacagcccgttgagcacgccg 255
Query: 249 gccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgttgtagctg 308
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gccttcatcttgtcgaacgccgcgttggtgggcgccatgatggtcagcccgttgtagctg 195
Query: 309 tccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagctgccggaac 368
|||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||
Sbjct: 194 tccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagctgcttgaac 135
Query: 369 tcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccgcgtccgcc 428
|||||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||
Sbjct: 134 tcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccgcgtccgcc 75
Query: 429 gcgcccgcgcccga 442
||||| |||||||
Sbjct: 74 gcgccgccgcccga 61
>gb|CD205813.1|CD205813 HS1_18_C07.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_18_C07_A012 5', mRNA sequence
Length = 625
Score = 444 bits (224), Expect = e-123
Identities = 310/338 (91%), Gaps = 3/338 (0%)
Strand = Plus / Minus
Query: 139 tgaccttgccgctgagggtgccgagcatggacaggctgtagaaccggggcagcacgcagt 198
||||||||||| |||||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 625 tgaccttgccgtcgagggtgccgagcatggagaggctgtagaagcgcggcagcacgcagt 566
Query: 199 agagcaccatctggatctgctcctgcggcgacagcccgttcagcacgcccgccttcatct 258
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 565 agagcaccatctggatctgctcctgcggcgacagcccgttgagcacgccggccttcatct 506
Query: 259 tgtcgaaggcggcgttggtgggcgccatgatggtcagcccgttgtagctgtccgtcagct 318
||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtcgaacgccgtgttggtgggcgccatgatggtcagcccgttgtagctgtccgtcagct 446
Query: 319 gcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagctgccggaactcgctgaact 378
|||||||||||||||||||||||||||||||||| | ||||||| ||| ||||||||||
Sbjct: 445 gcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagctgcttgaattcgctgaact 386
Query: 379 gctcgtccttcagcgccttgttcacgtccgtcggcggcgccgcgtccgccgcgcccgcgc 438
|||||||||| ||||||||||| | ||||||||| |||||||||||||||||||| |||
Sbjct: 385 gctcgtccttgagcgccttgttgatgtccgtcggtggcgccgcgtccgccgcgccgccgc 326
Query: 439 ccgagcccgacgacgacgccggccctggcgcggccttc 476
|||| |||||||| || || |||||||||||||||
Sbjct: 325 ccga---cgacgacgctgctggacctggcgcggccttc 291
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 236 gacgacgccaggagcaccaacaggatggcgaggcg 202
>gb|AW676898.1|AW676898 DG1_2_H12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 470
Score = 442 bits (223), Expect = e-122
Identities = 308/336 (91%), Gaps = 3/336 (0%)
Strand = Plus / Minus
Query: 141 accttgccgctgagggtgccgagcatggacaggctgtagaaccggggcagcacgcagtag 200
||||||||| |||||||||||||||||| || |||||||| || |||||||||||||||
Sbjct: 470 accttgccgtcgagggtgccgagcatggagagnctgtagaagcgcggcagcacgcagtag 411
Query: 201 agcaccatctggatctgctcctgcggcgacagcccgttcagcacgcccgccttcatcttg 260
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 410 agcaccatctggatctgctcctgcggcgacagcccgttgagcacgccggccttcatcttg 351
Query: 261 tcgaaggcggcgttggtgggcgccatgatggtcagcccgttgtagctgtccgtcagctgc 320
||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tcgaacgccgtgttggtgggcgccatgatggtcagcccgttgtagctgtccgtcagctgc 291
Query: 321 gcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagctgccggaactcgctgaactgc 380
|||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||
Sbjct: 290 gcgttgatctgcgtgtccacgcgcgtgtcgtggagcagctgcttgaactcgctgaactgc 231
Query: 381 tcgtccttcagcgccttgttcacgtccgtcggcggcgccgcgtccgccgcgcccgcgccc 440
|||||||| ||||||||||| | ||||||||| |||||||||||||||||||| |||||
Sbjct: 230 tcgtccttgagcgccttgttgatgtccgtcggtggcgccgcgtccgccgcgccgccgccc 171
Query: 441 gagcccgacgacgacgccggccctggcgcggccttc 476
|| |||||||| || || |||||||||||||||
Sbjct: 170 ga---cgacgacgctgctggacctggcgcggccttc 138
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 83 gacgacgccaggagcaccaacaggatggcgaggcg 49
>gb|BI075941.1|BI075941 IP1_23_C05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 519
Score = 369 bits (186), Expect = e-100
Identities = 225/238 (94%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 250 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 191
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 190 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 131
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 130 ggccggagccctgcgtgttgaccttgccgtcgagggtgccgagcatggagaggctgtaga 71
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgtt 238
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 agcgcggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagcccgtt 13
>gb|CF430499.1|CF430499 PH1_28_E08.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_28_E08_A002 5', mRNA sequence
Length = 738
Score = 359 bits (181), Expect = 2e-097
Identities = 220/233 (94%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 663 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 604
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 603 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 544
Query: 121 ggccggacccctgcgtgttgaccttgccgctgagggtgccgagcatggacaggctgtaga 180
||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 543 ggccggagccctgcgtgttgaccttgccgtcgagggtgccgagcatggagaggctgtaga 484
Query: 181 accggggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagc 233
| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 agcgcggcagcacgcagtagagcaccatctggatctgctcctgcggcgacagc 431
Score = 266 bits (134), Expect = 2e-069
Identities = 199/220 (90%), Gaps = 3/220 (1%)
Strand = Plus / Minus
Query: 257 cttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgttgtagctgtccgtcag 316
||||||||| || | |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 334 cttgtcgaacgccgtgttggtgggcgccaagatggtcagcccgttgtagctgtccgtcag 275
Query: 317 ctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagctgccggaactcgctgaa 376
|||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct: 274 ctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagctgcttgaactcgctgaa 215
Query: 377 ctgctcgtccttcagcgccttgttcacgtccgtcggcggcgccgcgtccgccgcgcccgc 436
|||||||||||| ||||||||||| | ||||||||| |||||||||||||||||||| |
Sbjct: 214 ctgctcgtccttgagcgccttgttgatgtccgtcggtggcgccgcgtccgccgcgccgcc 155
Query: 437 gcccgagcccgacgacgacgccggccctggcgcggccttc 476
|||||| |||||||| || || |||||||||||||||
Sbjct: 154 gcccga---cgacgacgctgctggacctggcgcggccttc 118
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 63 gacgacgccaggagcaccaacaggatggcgaggcg 29
Score = 44.1 bits (22), Expect = 0.014
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttg 26
||||||||||||||||||| ||||||
Sbjct: 356 ggtagatggcgagcgggaattccttg 331
>gb|BG558820.1|BG558820 RHIZ2_57_A12.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 340
Score = 333 bits (168), Expect = 1e-089
Identities = 210/224 (93%)
Strand = Plus / Minus
Query: 219 tcctgcggcgacagcccgttcagcacgcccgccttcatcttgtcgaaggcggcgttggtg 278
|||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||
Sbjct: 340 tcctgcggcgacagcccgttgagcacgccggccttcatcttgtcgaacgccgcgttggtg 281
Query: 279 ggcgccatgatggtcagcccgttgtagctgtccgtcagctgcgcgttgatctgcgtgtcc 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ggcgccatgatggtcagcccgttgtagctgtccgtcagctgcgcgttgatctgcgtgtcc 221
Query: 339 acgcgcgtgtcgtgcaacagctgccggaactcgctgaactgctcgtccttcagcgccttg 398
|||||||||||||| | ||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 220 acgcgcgtgtcgtggagcagctgcttgaactcgctgaactgctcgtccttgagcgccttg 161
Query: 399 ttcacgtccgtcggcggcgccgcgtccgccgcgcccgcgcccga 442
|| | ||||||||| |||||||||||||||||||| |||||||
Sbjct: 160 ttgatgtccgtcggtggcgccgcgtccgccgcgccgccgcccga 117
>gb|BG465799.1|BG465799 RHIZ2_48_G04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 514
Score = 309 bits (156), Expect = 1e-082
Identities = 198/212 (93%)
Strand = Plus / Minus
Query: 231 agcccgttcagcacgcccgccttcatcttgtcgaaggcggcgttggtgggcgccatgatg 290
|||||||| |||||||| ||||||||||||||||| || |||||||||||||||||||||
Sbjct: 514 agcccgttgagcacgccggccttcatcttgtcgaacgccgcgttggtgggcgccatgatg 455
Query: 291 gtcagcccgttgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcg 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gtcagcccgttgtagctgtccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcg 395
Query: 351 tgcaacagctgccggaactcgctgaactgctcgtccttcagcgccttgttcacgtccgtc 410
|| | ||||||| |||||||||||||||||||||||| ||||||||||| | |||||||
Sbjct: 394 tggagcagctgcttgaactcgctgaactgctcgtccttgagcgccttgttgatgtccgtc 335
Query: 411 ggcggcgccgcgtccgccgcgcccgcgcccga 442
|| |||||||||||||||||||| |||||||
Sbjct: 334 ggtggcgccgcgtccgccgcgccgccgcccga 303
>gb|BE357184.1|BE357184 DG1_147_A06.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 348
Score = 289 bits (146), Expect = 1e-076
Identities = 208/228 (91%), Gaps = 3/228 (1%)
Strand = Plus / Minus
Query: 249 gccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgttgtagctg 308
||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||
Sbjct: 344 gccttcatcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgttgtagctg 285
Query: 309 tccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagctgccggaac 368
|||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||
Sbjct: 284 tccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagctgcttgaac 225
Query: 369 tcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccgcgtccgcc 428
|||||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||
Sbjct: 224 tcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccgcgtccgcc 165
Query: 429 gcgcccgcgcccgagcccgacgacgacgccggccctggcgcggccttc 476
||||| ||||||| |||||||| || || |||||||||||||||
Sbjct: 164 gcgccgccgcccga---cgacgacgctgctggacctggcgcggccttc 120
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 65 gacgacgccaggagcaccaacaggatggcgaggcg 31
>gb|BG051235.1|BG051235 FM1_57_H07.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 323
Score = 289 bits (146), Expect = 1e-076
Identities = 182/194 (93%)
Strand = Plus / Minus
Query: 249 gccttcatcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgttgtagctg 308
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gccttcatcttgtcgaacgccgcgttggtgggcgccatgatggtcagcccgttgtagctg 260
Query: 309 tccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagctgccggaac 368
|||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||
Sbjct: 259 tccgtcagctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagctgcttgaac 200
Query: 369 tcgctgaactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccgcgtccgcc 428
|||||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||
Sbjct: 199 tcgctgaactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccgcgtccgcc 140
Query: 429 gcgcccgcgcccga 442
||||| |||||||
Sbjct: 139 gcgccgccgcccga 126
>gb|CD235470.1|CD235470 SS1_29_B02.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_29_B02_A012 5', mRNA sequence
Length = 498
Score = 278 bits (140), Expect = 5e-073
Identities = 202/222 (90%), Gaps = 3/222 (1%)
Strand = Plus / Minus
Query: 255 atcttgtcgaaggcggcgttggtgggcgccatgatggtcagcccgttgtagctgtccgtc 314
||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 atcttgtcgaacgccgtgttggtgggcgccatgatggtcagcccgttgtagctgtccgtc 439
Query: 315 agctgcgcgttgatctgcgtgtccacgcgcgtgtcgtgcaacagctgccggaactcgctg 374
|||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||
Sbjct: 438 agctgcgcgttgatctgcgtgtccacgcgcgtgtcgtggagcagctgcttgaactcgctg 379
Query: 375 aactgctcgtccttcagcgccttgttcacgtccgtcggcggcgccgcgtccgccgcgccc 434
|||||||||||||| ||||||||||| | ||||||||| ||||||||||||||||||||
Sbjct: 378 aactgctcgtccttgagcgccttgttgatgtccgtcggtggcgccgcgtccgccgcgccg 319
Query: 435 gcgcccgagcccgacgacgacgccggccctggcgcggccttc 476
||||||| |||||||| || || |||||||||||||||
Sbjct: 318 ccgcccga---cgacgacgctgctggacctggcgcggccttc 280
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 225 gacgacgccaggagcaccaacaggatggcgaggcg 191
>gb|CD207279.1|CD207279 HS1_62_E06.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_62_E06_A012 5', mRNA sequence
Length = 532
Score = 268 bits (135), Expect = 5e-070
Identities = 188/205 (91%), Gaps = 3/205 (1%)
Strand = Plus / Minus
Query: 272 gttggtgggcgccatgatggtcagcccgttgtagctgtccgtcagctgcgcgttgatctg 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gttggtgggcgccatgatggtcagcccgttgtagctgtccgtcagctgcgcgttgatctg 429
Query: 332 cgtgtccacgcgcgtgtcgtgcaacagctgccggaactcgctgaactgctcgtccttcag 391
||||||||||||||||||||| | ||||||| |||||||||||||||||||||||| ||
Sbjct: 428 cgtgtccacgcgcgtgtcgtggagcagctgcttgaactcgctgaactgctcgtccttgag 369
Query: 392 cgccttgttcacgtccgtcggcggcgccgcgtccgccgcgcccgcgcccgagcccgacga 451
||||||||| | ||||||||| |||||||||||||||||||| ||||||| ||||||
Sbjct: 368 cgccttgttgatgtccgtcggtggcgccgcgtccgccgcgccgccgcccga---cgacga 312
Query: 452 cgacgccggccctggcgcggccttc 476
|| || || |||||||||||||||
Sbjct: 311 cgctgctggacctggcgcggccttc 287
Score = 54.0 bits (27), Expect = 1e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 498 gacgccgccaggagcaccaagaggatggcgaggcg 532
|||| ||||||||||||||| ||||||||||||||
Sbjct: 232 gacgacgccaggagcaccaacaggatggcgaggcg 198
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 171 aggctgtagaaccggggcagcacgcagtagagcac 205
||||||||||| || | ||||||||||||||||||
Sbjct: 528 aggctgtagaagcgcgccagcacgcagtagagcac 494
>gb|BG560203.1|BG560203 RHIZ2_71_E08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 481
Score = 264 bits (133), Expect = 8e-069
Identities = 163/173 (94%)
Strand = Plus / Minus
Query: 270 gcgttggtgggcgccatgatggtcagcccgttgtagctgtccgtcagctgcgcgttgatc 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gcgttggtgggcgccatgatggtcagcccgttgtagctgtccgtcagctgcgcgttgatc 416
Query: 330 tgcgtgtccacgcgcgtgtcgtgcaacagctgccggaactcgctgaactgctcgtccttc 389
||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||
Sbjct: 415 tgcgtgtccacgcgcgtgtcgtggagcagctgcttgaactcgctgaactgctcgtccttg 356
Query: 390 agcgccttgttcacgtccgtcggcggcgccgcgtccgccgcgcccgcgcccga 442
||||||||||| | ||||||||| |||||||||||||||||||| |||||||
Sbjct: 355 agcgccttgttgatgtccgtcggtggcgccgcgtccgccgcgccgccgcccga 303
>gb|BG241878.1|BG241878 RHIZ2_51_G08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 478
Score = 250 bits (126), Expect = 1e-064
Identities = 163/174 (93%), Gaps = 1/174 (0%)
Strand = Plus / Minus
Query: 270 gcgttggtgggcgccatgatggtcagccc-gttgtagctgtccgtcagctgcgcgttgat 328
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 476 gcgttggtgggcgccatgatggtcagccccgttgtagctgtccgtcagctgcgcgttgat 417
Query: 329 ctgcgtgtccacgcgcgtgtcgtgcaacagctgccggaactcgctgaactgctcgtcctt 388
|||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||
Sbjct: 416 ctgcgtgtccacgcgcgtgtcgtggagcagctgcttgaactcgctgaactgctcgtcctt 357
Query: 389 cagcgccttgttcacgtccgtcggcggcgccgcgtccgccgcgcccgcgcccga 442
||||||||||| | ||||||||| |||||||||||||||||||| |||||||
Sbjct: 356 gagcgccttgttgatgtccgtcggtggcgccgcgtccgccgcgccgccgcccga 303
>gb|BE355227.1|BE355227 DG1_113_B08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 434
Score = 232 bits (117), Expect = 3e-059
Identities = 141/149 (94%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 152 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 93
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 92 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 33
Query: 121 ggccggacccctgcgtgttgaccttgccg 149
||||||| |||||||||||||||||||||
Sbjct: 32 ggccggagccctgcgtgttgaccttgccg 4
>gb|BE361931.1|BE361931 DG1_83_E03.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 579
Score = 232 bits (117), Expect = 3e-059
Identities = 141/149 (94%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 152 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 93
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 92 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 33
Query: 121 ggccggacccctgcgtgttgaccttgccg 149
||||||| |||||||||||||||||||||
Sbjct: 32 ggccggagccctgcgtgttgaccttgccg 4
>gb|CN124812.1|CN124812 RHOH1_7_C01.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_7_C01_A002 3', mRNA sequence
Length = 798
Score = 232 bits (117), Expect = 3e-059
Identities = 141/149 (94%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 150 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 91
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||
Sbjct: 90 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgtaaggcccgtcgt 31
Query: 121 ggccggacccctgcgtgttgaccttgccg 149
||||||| |||||||||||||||||||||
Sbjct: 30 ggccggagccctgcgtgttgaccttgccg 2
>gb|CW096483.1|CW096483 104_462_11001918_148_34355_029 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11001918, DNA
sequence
Length = 430
Score = 204 bits (103), Expect = 6e-051
Identities = 136/147 (92%)
Strand = Plus / Plus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 284 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 343
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgtagggcccgtcgt 120
||||||||| |||||| ||||| ||||||||||||||||| ||| |||| |||||||| |
Sbjct: 344 ccgtggacatgttgacattgttgcccgaccgcttgatgtcttacttgtaaggcccgtctt 403
Query: 121 ggccggacccctgcgtgttgaccttgc 147
||||||| |||||||||||||||||||
Sbjct: 404 ggccggagccctgcgtgttgaccttgc 430
>gb|CF430445.1|CF430445 PH1_28_E08.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_28_E08_A002 3', mRNA sequence
Length = 682
Score = 168 bits (85), Expect = 3e-040
Identities = 103/109 (94%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 109 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 50
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgta 109
||||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 49 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgta 1
>gb|CN146737.1|CN146737 WOUND1_43_H09.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_43_H09_A002 3', mRNA sequence
Length = 757
Score = 168 bits (85), Expect = 3e-040
Identities = 103/109 (94%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 109 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 50
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgtcgtacctgta 109
||||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 49 ccgtggacatgttgacgttgttgcccgaccgcttgatgtcgtacttgta 1
>gb|CN143456.1|CN143456 WOUND1_16_H08.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_16_H08_A002 3', mRNA sequence
Length = 747
Score = 149 bits (75), Expect = 3e-034
Identities = 93/99 (93%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 99 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 40
Query: 61 ccgtggacacgttgacgttgttccccgaccgcttgatgt 99
||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 39 ccgtggacatgttgaccttgttgcccgaccgcttgatgt 1
>gb|BE361997.1|BE361997 DG1_83_E03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 626
Score = 105 bits (53), Expect = 4e-021
Identities = 62/65 (95%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcccagcagcatccagttcaccc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct: 65 ggtagatggcgagcgggaattccttgctgacggggctgcccagcagcatccagttgacgc 6
Query: 61 ccgtg 65
|||||
Sbjct: 5 ccgtg 1
>gb|BE358712.1|BE358712 DG1_31_C01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 670
Score = 71.9 bits (36), Expect = 6e-011
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 1 ggtagatggcgagcgggaagtccttgctgacggggctgcc 40
||||||||||||||||||| ||||||||||||||||||||
Sbjct: 40 ggtagatggcgagcgggaattccttgctgacggggctgcc 1
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 232,023
Number of Sequences: 832831
Number of extensions: 232023
Number of successful extensions: 69739
Number of sequences better than 0.5: 80
Number of HSP's better than 0.5 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69475
Number of HSP's gapped (non-prelim): 203
length of query: 560
length of database: 491,359,669
effective HSP length: 19
effective length of query: 541
effective length of database: 475,535,880
effective search space: 257264911080
effective search space used: 257264911080
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)