BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 9196052.2.1
(771 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BZ367148.1|BZ367148 id02f11.b1 WGS-SbicolorF (JM107 adap... 293 1e-077
gb|CW057154.1|CW057154 104_299_10518068_115_30171 Sorghum m... 293 1e-077
gb|CW092755.1|CW092755 104_455_10999359_114_33045_056 Sorgh... 293 1e-077
gb|CW222860.1|CW222860 104_658_11202600_148_37179_088 Sorgh... 293 1e-077
gb|CW360357.1|CW360357 fsbb001f028g13k0 Sorghum methylation... 293 1e-077
gb|CW432487.1|CW432487 fsbb001f147d15k0 Sorghum methylation... 293 1e-077
gb|CW434401.1|CW434401 fsbb001f150b10f0 Sorghum methylation... 293 1e-077
gb|BE356845.1|BE356845 DG1_145_G02.b1_A002 Dark Grown 1 (DG... 252 4e-065
gb|BE356942.1|BE356942 DG1_145_G02.g1_A002 Dark Grown 1 (DG... 252 4e-065
gb|CW274970.1|CW274970 104_748_11404711_116_35378_030 Sorgh... 210 1e-052
gb|CW277504.1|CW277504 104_751_11406063_148_35413_054 Sorgh... 210 1e-052
gb|CW281385.1|CW281385 104_757_11408148_148_35460_048 Sorgh... 210 1e-052
gb|CW295944.1|CW295944 104_777_11461223_148_35624_088 Sorgh... 210 1e-052
gb|CW465791.1|CW465791 fsbb001f216l12k0 Sorghum methylation... 210 1e-052
gb|AW677456.1|AW677456 DG1_7_A12.b1_A002 Dark Grown 1 (DG1)... 210 1e-052
gb|CW106693.1|CW106693 104_476_11096128_116_34467_056 Sorgh... 163 3e-038
gb|CW106694.1|CW106694 104_476_11096128_148_34463_056 Sorgh... 163 3e-038
gb|CW360356.1|CW360356 fsbb001f028g13f0 Sorghum methylation... 163 3e-038
gb|CW477234.1|CW477234 fsbb001f234h16k0 Sorghum methylation... 159 5e-037
gb|CW144697.1|CW144697 104_537_11138079_116_34972_064 Sorgh... 157 2e-036
gb|BZ693575.1|BZ693575 SP__Ba0036F01.r SP__Ba Sorghum propi... 96 6e-018
gb|CW787576.1|CW787576 SP__Ba0036F01.r SP__Ba Sorghum propi... 96 6e-018
gb|CW295943.1|CW295943 104_777_11461223_116_35620_088 Sorgh... 90 4e-016
gb|CL173039.1|CL173039 104_376_10890604_116_31795_124 Sorgh... 80 3e-013
gb|CW099509.1|CW099509 104_466_11003588_148_34377_072 Sorgh... 80 3e-013
gb|CW453023.1|CW453023 fsbb001f193n14f0 Sorghum methylation... 80 3e-013
gb|CL162553.1|CL162553 104_355_10806495_116_31833_015 Sorgh... 76 5e-012
gb|CW277503.1|CW277503 104_751_11406063_116_35409_054 Sorgh... 74 2e-011
gb|CL197378.1|CL197378 104_424_10943705_116_32339_075 Sorgh... 70 3e-010
gb|CW495938.1|CW495938 fsbb001f287o20f0 Sorghum methylation... 70 3e-010
gb|BZ339969.1|BZ339969 ic35h09.g1 WGS-SbicolorF (JM107 adap... 68 1e-009
gb|BZ367149.1|BZ367149 id02f11.g1 WGS-SbicolorF (JM107 adap... 68 1e-009
gb|CL192385.1|CL192385 104_415_10940198_114_32259_061 Sorgh... 68 1e-009
gb|CW131294.1|CW131294 104_514_11115597_148_34790_093 Sorgh... 68 1e-009
gb|BZ368192.1|BZ368192 id11h08.b1 WGS-SbicolorF (JM107 adap... 62 8e-008
gb|CW050175.1|CW050175 104_289_10514492_114_30202 Sorghum m... 62 8e-008
gb|CW093354.1|CW093354 104_456_10999729_114_33065_007 Sorgh... 62 8e-008
gb|CW110509.1|CW110509 104_483_11103751_148_34521_026 Sorgh... 62 8e-008
gb|CW124534.1|CW124534 104_504_11111834_116_34708_009 Sorgh... 62 8e-008
gb|CW230886.1|CW230886 104_680_11210834_116_37342_015 Sorgh... 62 8e-008
gb|CW416466.1|CW416466 fsbb001f117a09f0 Sorghum methylation... 62 8e-008
gb|BF420938.1|BF420938 FM1_5_B10.g1_A003 Floral-Induced Mer... 62 8e-008
gb|CN126308.1|CN126308 RHOH1_16_H09.b1_A002 Acid- and alkal... 62 8e-008
gb|CX611827.1|CX611827 ANR1_27_A06.b1_A002 Anaerobic roots ... 62 8e-008
gb|CX611914.1|CX611914 ANR1_27_A06.g1_A002 Anaerobic roots ... 62 8e-008
gb|CW063460.1|CW063460 104_309_10522019_114_30134 Sorghum m... 60 3e-007
gb|CW334849.1|CW334849 104_833_11482718_148_36072_055 Sorgh... 58 1e-006
gb|CL176773.1|CL176773 104_383_10893351_116_31773_183 Sorgh... 56 5e-006
gb|CL187967.1|CL187967 104_404_10901266_114_32445_047 Sorgh... 56 5e-006
gb|CW200417.1|CW200417 104_626_11184054_116_36868_031 Sorgh... 56 5e-006
gb|CW259755.1|CW259755 104_726_11228601_148_35186_043 Sorgh... 56 5e-006
gb|CW276142.1|CW276142 104_749_11405332_116_35387_004 Sorgh... 56 5e-006
gb|CW063461.1|CW063461 104_309_10522019_115_30140 Sorghum m... 54 2e-005
gb|CW281384.1|CW281384 104_757_11408148_116_35464_048 Sorgh... 54 2e-005
gb|CW465790.1|CW465790 fsbb001f216l12f0 Sorghum methylation... 54 2e-005
gb|CL194402.1|CL194402 104_418_10941606_114_32284_017 Sorgh... 50 3e-004
gb|CL197377.1|CL197377 104_424_10943705_114_32335_075 Sorgh... 50 3e-004
gb|CW082432.1|CW082432 104_424_10943705_114_32384_075 Sorgh... 50 3e-004
gb|CW152559.1|CW152559 104_553_11144556_148_36328_034 Sorgh... 50 3e-004
gb|CW028774.1|CW028774 104_256_10499295_114_30399 Sorghum m... 48 0.001
gb|CL178164.1|CL178164 104_386_10894367_116_31912_047 Sorgh... 46 0.005
gb|CW034871.1|CW034871 104_265_10502819_114_30378 Sorghum m... 46 0.005
gb|CW220316.1|CW220316 104_654_11197285_148_37150_049 Sorgh... 46 0.005
gb|CL192386.1|CL192386 104_415_10940198_116_32263_061 Sorgh... 44 0.019
gb|CW259754.1|CW259754 104_726_11228601_116_35190_043 Sorgh... 44 0.019
gb|CL153212.1|CL153212 104_337_10780563_114_31367_195 Sorgh... 42 0.074
gb|CW037016.1|CW037016 104_268_10504094_114_30381 Sorghum m... 42 0.074
gb|CW049818.1|CW049818 104_289_10514279_115_30204 Sorghum m... 42 0.074
gb|CW158940.1|CW158940 104_564_11149093_116_36399_049 Sorgh... 42 0.074
gb|CW168263.1|CW168263 104_577_11154050_148_36493_001 Sorgh... 42 0.074
gb|CL697325.2|CL697325 SP__Ba0009K05.r SP__Ba Sorghum propi... 42 0.074
gb|CL157482.1|CL157482 104_345_10783607_114_31477_167 Sorgh... 40 0.29
gb|CL181600.1|CL181600 104_392_10896861_116_31926_237 Sorgh... 40 0.29
gb|CL181601.1|CL181601 104_392_10896861_148_31925_237 Sorgh... 40 0.29
gb|CL184682.1|CL184682 104_398_10899018_116_32373_077 Sorgh... 40 0.29
gb|CL190340.1|CL190340 104_408_10906015_116_32503_026 Sorgh... 40 0.29
gb|CW067150.1|CW067150 104_314_10524089_114_30123 Sorghum m... 40 0.29
gb|CW070423.1|CW070423 104_321_10526744_1_30090 Sorghum met... 40 0.29
gb|CW107038.1|CW107038 104_477_11096337_148_34472_047 Sorgh... 40 0.29
gb|CW125417.1|CW125417 104_505_11112316_148_34712_006 Sorgh... 40 0.29
gb|CW135845.1|CW135845 104_520_11118063_116_34836_054 Sorgh... 40 0.29
gb|CW200043.1|CW200043 104_625_11183840_116_36864_026 Sorgh... 40 0.29
gb|CW204230.1|CW204230 104_632_11186432_116_36924_030 Sorgh... 40 0.29
gb|CW253583.1|CW253583 104_717_11225174_116_35113_059 Sorgh... 40 0.29
gb|CW448040.1|CW448040 fsbb001f181h09k0 Sorghum methylation... 40 0.29
gb|CL152031.1|CL152031 104_335_10779672_114_31363_072 Sorgh... 38 1.2
gb|CL167283.1|CL167283 104_364_10809962_114_31802_026 Sorgh... 38 1.2
gb|CW036393.1|CW036393 104_267_10503733_115_30375 Sorghum m... 38 1.2
gb|CW056698.1|CW056698 104_298_10517821_115_30157 Sorghum m... 38 1.2
gb|CW057135.1|CW057135 104_299_10518059_114_30169 Sorghum m... 38 1.2
gb|CW095561.1|CW095561 104_460_11001392_116_34327_020 Sorgh... 38 1.2
gb|CW097344.1|CW097344 104_463_11002405_116_34346_057 Sorgh... 38 1.2
gb|CW186408.1|CW186408 104_604_11166551_116_36705_090 Sorgh... 38 1.2
gb|CW186409.1|CW186409 104_604_11166551_148_36706_090 Sorgh... 38 1.2
gb|CW194174.1|CW194174 104_617_11179959_116_36787_060 Sorgh... 38 1.2
gb|CW222764.1|CW222764 104_658_11202550_148_37179_089 Sorgh... 38 1.2
gb|CW235543.1|CW235543 104_690_11215037_116_37409_017 Sorgh... 38 1.2
gb|CW235544.1|CW235544 104_690_11215037_148_37413_017 Sorgh... 38 1.2
gb|CW296149.1|CW296149 104_777_11461338_116_35623_067 Sorgh... 38 1.2
gb|CW296150.1|CW296150 104_777_11461338_148_35627_067 Sorgh... 38 1.2
gb|CW322977.1|CW322977 104_817_11476390_148_35959_095 Sorgh... 38 1.2
gb|CW329385.1|CW329385 104_825_11479817_148_36000_065 Sorgh... 38 1.2
gb|CW390943.1|CW390943 fsbb001f076n11k0 Sorghum methylation... 38 1.2
gb|CW430589.1|CW430589 fsbb001f144f18f0 Sorghum methylation... 38 1.2
gb|CW437435.1|CW437435 fsbb001f154i20k0 Sorghum methylation... 38 1.2
gb|BE592517.1|BE592517 WS1_94_A10.b1_A002 Water-stressed 1 ... 38 1.2
gb|BM322539.1|BM322539 PIC1_6_B01.b1_A002 Pathogen-infected... 38 1.2
gb|BH245887.1|BH245887 pSB1458.1 S. bicolor BTx623 PstI-dig... 36 4.6
gb|BZ337119.1|BZ337119 ia85d06.b1 WGS-SbicolorF (JM107 adap... 36 4.6
gb|BZ340916.1|BZ340916 ic41h05.g1 WGS-SbicolorF (JM107 adap... 36 4.6
gb|BZ694376.1|BZ694376 SP__Ba0046D20.r SP__Ba Sorghum propi... 36 4.6
gb|CL150869.1|CL150869 104_333_10778839_114_31359_007 Sorgh... 36 4.6
gb|CL151079.1|CL151079 104_333_10778994_114_31359_162 Sorgh... 36 4.6
gb|CL151080.1|CL151080 104_333_10778994_116_31360_162 Sorgh... 36 4.6
gb|CL157483.1|CL157483 104_345_10783607_116_31478_167 Sorgh... 36 4.6
gb|CL168706.1|CL168706 104_366_10811022_148_31806_318 Sorgh... 36 4.6
gb|CL176127.1|CL176127 104_382_10892917_116_31763_133 Sorgh... 36 4.6
gb|CL178158.1|CL178158 104_386_10894363_116_31912_043 Sorgh... 36 4.6
gb|CL178159.1|CL178159 104_386_10894363_148_31911_043 Sorgh... 36 4.6
gb|CL181438.1|CL181438 104_392_10896754_116_31926_130 Sorgh... 36 4.6
gb|CL181439.1|CL181439 104_392_10896754_148_31925_130 Sorgh... 36 4.6
gb|CL186759.1|CL186759 104_401_10900418_116_32411_001 Sorgh... 36 4.6
gb|CW029569.1|CW029569 104_257_10499751_114_30401 Sorghum m... 36 4.6
gb|CW029571.1|CW029571 104_257_10499752_114_30401 Sorghum m... 36 4.6
gb|CW040842.1|CW040842 104_274_10506308_114_30470 Sorghum m... 36 4.6
gb|CW047773.1|CW047773 104_285_10512882_114_30216 Sorghum m... 36 4.6
gb|CW048574.1|CW048574 104_287_10513482_114_30211 Sorghum m... 36 4.6
gb|CW049431.1|CW049431 104_288_10514022_115_30199 Sorghum m... 36 4.6
gb|CW049513.1|CW049513 104_288_10514072_114_30200 Sorghum m... 36 4.6
gb|CW049969.1|CW049969 104_289_10514371_114_30202 Sorghum m... 36 4.6
gb|CW090158.1|CW090158 104_435_10949121_114_32596_033 Sorgh... 36 4.6
gb|CW090159.1|CW090159 104_435_10949121_116_32594_033 Sorgh... 36 4.6
gb|CW110508.1|CW110508 104_483_11103751_116_34517_026 Sorgh... 36 4.6
gb|CW130581.1|CW130581 104_513_11115194_148_34779_013 Sorgh... 36 4.6
gb|CW144090.1|CW144090 104_536_11137759_148_34962_030 Sorgh... 36 4.6
gb|CW146339.1|CW146339 104_539_11138941_148_34984_059 Sorgh... 36 4.6
gb|CW147850.1|CW147850 104_542_11140106_116_35003_011 Sorgh... 36 4.6
gb|CW150626.1|CW150626 104_551_11143509_116_36307_093 Sorgh... 36 4.6
gb|CW152306.1|CW152306 104_553_11144420_116_36324_072 Sorgh... 36 4.6
gb|CW152307.1|CW152307 104_553_11144420_148_36328_072 Sorgh... 36 4.6
gb|CW169535.1|CW169535 104_579_11154725_116_36499_021 Sorgh... 36 4.6
gb|CW195478.1|CW195478 104_619_11180659_116_36805_078 Sorgh... 36 4.6
gb|CW202289.1|CW202289 104_628_11185015_116_36934_024 Sorgh... 36 4.6
gb|CW224197.1|CW224197 104_660_11203321_116_37197_009 Sorgh... 36 4.6
gb|CW224198.1|CW224198 104_660_11203321_148_37198_009 Sorgh... 36 4.6
gb|CW224980.1|CW224980 104_662_11204108_116_37206_074 Sorgh... 36 4.6
gb|CW225040.1|CW225040 104_662_11204138_116_37206_007 Sorgh... 36 4.6
gb|CW227095.1|CW227095 104_665_11205233_116_37223_073 Sorgh... 36 4.6
gb|CW227096.1|CW227096 104_665_11205233_148_37224_073 Sorgh... 36 4.6
gb|CW238390.1|CW238390 104_695_11216705_116_37527_075 Sorgh... 36 4.6
gb|CW244409.1|CW244409 104_705_11220581_116_37585_025 Sorgh... 36 4.6
gb|CW245286.1|CW245286 104_706_11220954_148_35077_075 Sorgh... 36 4.6
gb|CW245287.1|CW245287 104_706_11220954_148_37599_075 Sorgh... 36 4.6
gb|CW255073.1|CW255073 104_719_11226028_116_35125_008 Sorgh... 36 4.6
gb|CW258925.1|CW258925 104_725_11228144_116_35185_032 Sorgh... 36 4.6
gb|CW266229.1|CW266229 104_735_11232312_148_35266_082 Sorgh... 36 4.6
gb|CW271953.1|CW271953 104_744_11403240_116_36224_092 Sorgh... 36 4.6
gb|CW271954.1|CW271954 104_744_11403240_148_36223_092 Sorgh... 36 4.6
gb|CW272031.1|CW272031 104_744_11403272_116_36224_026 Sorgh... 36 4.6
gb|CW280145.1|CW280145 104_755_11407461_116_35441_091 Sorgh... 36 4.6
gb|CW291612.1|CW291612 104_771_11413644_148_35759_042 Sorgh... 36 4.6
gb|CW292648.1|CW292648 104_772_11414198_116_35580_051 Sorgh... 36 4.6
gb|CW294921.1|CW294921 104_776_11460656_148_35615_032 Sorgh... 36 4.6
gb|CW296125.1|CW296125 104_777_11461326_116_35623_019 Sorgh... 36 4.6
gb|CW313602.1|CW313602 104_803_11471371_116_35786_066 Sorgh... 36 4.6
gb|CW322530.1|CW322530 104_816_11476146_148_35951_073 Sorgh... 36 4.6
gb|CW323201.1|CW323201 104_817_11476506_116_35962_075 Sorgh... 36 4.6
gb|CW326815.1|CW326815 104_822_11478417_116_35967_043 Sorgh... 36 4.6
gb|CW326816.1|CW326816 104_822_11478417_148_35966_043 Sorgh... 36 4.6
gb|CW330008.1|CW330008 104_826_11480146_116_35998_035 Sorgh... 36 4.6
gb|CW330009.1|CW330009 104_826_11480146_148_35997_035 Sorgh... 36 4.6
gb|CW408111.1|CW408111 fsbb001f101n21k0 Sorghum methylation... 36 4.6
gb|CW410345.1|CW410345 fsbb001f105a22f0 Sorghum methylation... 36 4.6
gb|CW442981.1|CW442981 fsbb001f162n22f0 Sorghum methylation... 36 4.6
gb|CW465747.1|CW465747 fsbb001f216k11f0 Sorghum methylation... 36 4.6
gb|CW497577.1|CW497577 fsbb001f290g09k0 Sorghum methylation... 36 4.6
gb|CW500503.1|CW500503 fsbb001f295n17k0 Sorghum methylation... 36 4.6
gb|CW500994.1|CW500994 fsbb001f296j07f0 Sorghum methylation... 36 4.6
gb|CW788524.1|CW788524 SP__Ba0046D20.r SP__Ba Sorghum propi... 36 4.6
gb|AW678829.1|AW678829 WS1_1_C11.g1_A002 Water-stressed 1 (... 36 4.6
gb|BE600283.1|BE600283 PI1_94_E08.g1_A002 Pathogen induced ... 36 4.6
gb|BG560219.1|BG560219 RHIZ2_71_E10.b1_A003 Rhizome2 (RHIZ2... 36 4.6
gb|BG948051.1|BG948051 IP1_8_G04.b1_A002 Immature pannicle ... 36 4.6
gb|BI075234.1|BI075234 IP1_17_G01.b1_A002 Immature pannicle... 36 4.6
gb|BM324530.1|BM324530 PIC1_32_D04.b1_A002 Pathogen-infecte... 36 4.6
gb|BM329019.1|BM329019 PIC1_32_D04.g1_A002 Pathogen-infecte... 36 4.6
gb|CF432970.1|CF432970 NIT1_20_F10.b1_A002 Nitrogen-deficie... 36 4.6
gb|CF433957.1|CF433957 NIT1_31_A05.b1_A002 Nitrogen-deficie... 36 4.6
gb|CN126399.1|CN126399 RHOH1_16_H09.g1_A002 Acid- and alkal... 36 4.6
gb|CN140849.1|CN140849 OX1_47_C03.g1_A002 Oxidatively-stres... 36 4.6
gb|CN146949.1|CN146949 WOUND1_45_H01.b1_A002 Wounded leaves... 36 4.6
>gb|BZ367148.1|BZ367148 id02f11.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone id02f11 5', DNA sequence
Length = 696
Score = 293 bits (148), Expect = 1e-077
Identities = 163/168 (97%)
Strand = Plus / Minus
Query: 484 gacggacttgggctagcggaggaggctgcggatgatctcggcgccggggctgttgtggtc 543
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gacggacttcagctagcggaggaggctgcggatgatctcggcgccggggctgttgtggtc 362
Query: 544 catgctggccatgaggtccgacaggcggtcgctcagatcgtccacctcccggtgcaggct 603
|||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 361 catggtggccatgaggtcggacaggcggtcgctcaggtcgtccacctcccggtgcaggct 302
Query: 604 cttgatgtagctgcaggtctccttgagcagcttcgtcgtcgacgcctg 651
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttgatgtagctgcaggtctccttgagcagcttcgtcgtcgacgcctg 254
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 328 tatattcagctgctatatg 346
|||||||||||||||||||
Sbjct: 529 tatattcagctgctatatg 511
>gb|CW057154.1|CW057154 104_299_10518068_115_30171 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518068, DNA
sequence
Length = 544
Score = 293 bits (148), Expect = 1e-077
Identities = 163/168 (97%)
Strand = Plus / Plus
Query: 484 gacggacttgggctagcggaggaggctgcggatgatctcggcgccggggctgttgtggtc 543
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gacggacttcagctagcggaggaggctgcggatgatctcggcgccggggctgttgtggtc 354
Query: 544 catgctggccatgaggtccgacaggcggtcgctcagatcgtccacctcccggtgcaggct 603
|||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 355 catggtggccatgaggtcggacaggcggtcgctcaggtcgtccacctcccggtgcaggct 414
Query: 604 cttgatgtagctgcaggtctccttgagcagcttcgtcgtcgacgcctg 651
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 cttgatgtagctgcaggtctccttgagcagcttcgtcgtcgacgcctg 462
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 328 tatattcagctgctatatg 346
|||||||||||||||||||
Sbjct: 187 tatattcagctgctatatg 205
>gb|CW092755.1|CW092755 104_455_10999359_114_33045_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10999359, DNA
sequence
Length = 644
Score = 293 bits (148), Expect = 1e-077
Identities = 163/168 (97%)
Strand = Plus / Plus
Query: 484 gacggacttgggctagcggaggaggctgcggatgatctcggcgccggggctgttgtggtc 543
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 gacggacttcagctagcggaggaggctgcggatgatctcggcgccggggctgttgtggtc 221
Query: 544 catgctggccatgaggtccgacaggcggtcgctcagatcgtccacctcccggtgcaggct 603
|||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 222 catggtggccatgaggtcggacaggcggtcgctcaggtcgtccacctcccggtgcaggct 281
Query: 604 cttgatgtagctgcaggtctccttgagcagcttcgtcgtcgacgcctg 651
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 cttgatgtagctgcaggtctccttgagcagcttcgtcgtcgacgcctg 329
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 328 tatattcagctgctatatg 346
|||||||||||||||||||
Sbjct: 54 tatattcagctgctatatg 72
>gb|CW222860.1|CW222860 104_658_11202600_148_37179_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11202600, DNA
sequence
Length = 760
Score = 293 bits (148), Expect = 1e-077
Identities = 163/168 (97%)
Strand = Plus / Plus
Query: 484 gacggacttgggctagcggaggaggctgcggatgatctcggcgccggggctgttgtggtc 543
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gacggacttcagctagcggaggaggctgcggatgatctcggcgccggggctgttgtggtc 533
Query: 544 catgctggccatgaggtccgacaggcggtcgctcagatcgtccacctcccggtgcaggct 603
|||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 534 catggtggccatgaggtcggacaggcggtcgctcaggtcgtccacctcccggtgcaggct 593
Query: 604 cttgatgtagctgcaggtctccttgagcagcttcgtcgtcgacgcctg 651
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 cttgatgtagctgcaggtctccttgagcagcttcgtcgtcgacgcctg 641
Score = 67.9 bits (34), Expect = 1e-009
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 39 ctcgcggttggtcggttgtctgtcaaggaggaaacaactcgatccagaccacacatag 96
|||||||| |||||||||||||| |||| |||||||||||||||| ||||||| ||||
Sbjct: 14 ctcgcggtcggtcggttgtctgtgaagg-ggaaacaactcgatccggaccacagatag 70
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 328 tatattcagctgctatatg 346
|||||||||||||||||||
Sbjct: 366 tatattcagctgctatatg 384
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 146 caagagtacaaacaaatggaaaa 168
|||||||||||||||||| ||||
Sbjct: 133 caagagtacaaacaaatgaaaaa 155
>gb|CW360357.1|CW360357 fsbb001f028g13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f028g13, DNA
sequence
Length = 688
Score = 293 bits (148), Expect = 1e-077
Identities = 163/168 (97%)
Strand = Plus / Plus
Query: 484 gacggacttgggctagcggaggaggctgcggatgatctcggcgccggggctgttgtggtc 543
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gacggacttcagctagcggaggaggctgcggatgatctcggcgccggggctgttgtggtc 345
Query: 544 catgctggccatgaggtccgacaggcggtcgctcagatcgtccacctcccggtgcaggct 603
|||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 346 catggtggccatgaggtcggacaggcggtcgctcaggtcgtccacctcccggtgcaggct 405
Query: 604 cttgatgtagctgcaggtctccttgagcagcttcgtcgtcgacgcctg 651
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 cttgatgtagctgcaggtctccttgagcagcttcgtcgtcgacgcctg 453
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 328 tatattcagctgctatatg 346
|||||||||||||||||||
Sbjct: 178 tatattcagctgctatatg 196
>gb|CW432487.1|CW432487 fsbb001f147d15k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f147d15, DNA
sequence
Length = 528
Score = 293 bits (148), Expect = 1e-077
Identities = 163/168 (97%)
Strand = Plus / Minus
Query: 484 gacggacttgggctagcggaggaggctgcggatgatctcggcgccggggctgttgtggtc 543
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gacggacttcagctagcggaggaggctgcggatgatctcggcgccggggctgttgtggtc 183
Query: 544 catgctggccatgaggtccgacaggcggtcgctcagatcgtccacctcccggtgcaggct 603
|||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 182 catggtggccatgaggtcggacaggcggtcgctcaggtcgtccacctcccggtgcaggct 123
Query: 604 cttgatgtagctgcaggtctccttgagcagcttcgtcgtcgacgcctg 651
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cttgatgtagctgcaggtctccttgagcagcttcgtcgtcgacgcctg 75
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 328 tatattcagctgctatatg 346
|||||||||||||||||||
Sbjct: 350 tatattcagctgctatatg 332
>gb|CW434401.1|CW434401 fsbb001f150b10f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f150b10, DNA
sequence
Length = 667
Score = 293 bits (148), Expect = 1e-077
Identities = 163/168 (97%)
Strand = Plus / Minus
Query: 484 gacggacttgggctagcggaggaggctgcggatgatctcggcgccggggctgttgtggtc 543
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gacggacttcagctagcggaggaggctgcggatgatctcggcgccggggctgttgtggtc 393
Query: 544 catgctggccatgaggtccgacaggcggtcgctcagatcgtccacctcccggtgcaggct 603
|||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 392 catggtggccatgaggtcggacaggcggtcgctcaggtcgtccacctcccggtgcaggct 333
Query: 604 cttgatgtagctgcaggtctccttgagcagcttcgtcgtcgacgcctg 651
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 cttgatgtagctgcaggtctccttgagcagcttcgtcgtcgacgcctg 285
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 328 tatattcagctgctatatg 346
|||||||||||||||||||
Sbjct: 560 tatattcagctgctatatg 542
>gb|BE356845.1|BE356845 DG1_145_G02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 583
Score = 252 bits (127), Expect = 4e-065
Identities = 205/231 (88%)
Strand = Plus / Minus
Query: 498 agcggaggaggctgcggatgatctcggcgccggggctgttgtggtccatgctggccatga 557
||||||||| |||||||||||| || ||||||||||||||||||||||| ||| ||| |
Sbjct: 520 agcggaggatgctgcggatgatttccgcgccggggctgttgtggtccatagtggacatca 461
Query: 558 ggtccgacaggcggtcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgc 617
|||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 460 ggtccgacagccggtcgctcaggtcgtcgacctcccggtggaggctcttgatgtagctgc 401
Query: 618 aggtctccttgagcagcttcgtcgtcgacgcctggctgccgccacggcggcgcgcgctgg 677
|||||||||| ||||||||||||||||||||||||| | ||| |||||||| | |||||
Sbjct: 400 aggtctccttcagcagcttcgtcgtcgacgcctggccggagccgcggcggcgggagctgg 341
Query: 678 ggagcagcgtctgcagcctcgagataagctcgttgatctcctcctccgaga 728
||||||| | ||| ||| | ||||| |||||||||||||| ||||| ||||
Sbjct: 340 ggagcagggcctggagcttggagatgagctcgttgatctcgtcctcggaga 290
>gb|BE356942.1|BE356942 DG1_145_G02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 535
Score = 252 bits (127), Expect = 4e-065
Identities = 205/231 (88%)
Strand = Plus / Minus
Query: 498 agcggaggaggctgcggatgatctcggcgccggggctgttgtggtccatgctggccatga 557
||||||||| |||||||||||| || ||||||||||||||||||||||| ||| ||| |
Sbjct: 342 agcggaggatgctgcggatgatttccgcgccggggctgttgtggtccatagtggacatca 283
Query: 558 ggtccgacaggcggtcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgc 617
|||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 282 ggtccgacagccggtcgctcaggtcgtcgacctcccggtggaggctcttgatgtagctgc 223
Query: 618 aggtctccttgagcagcttcgtcgtcgacgcctggctgccgccacggcggcgcgcgctgg 677
|||||||||| ||||||||||||||||||||||||| | ||| |||||||| | |||||
Sbjct: 222 aggtctccttcagcagcttcgtcgtcgacgcctggccggagccgcggcggcgggagctgg 163
Query: 678 ggagcagcgtctgcagcctcgagataagctcgttgatctcctcctccgaga 728
||||||| | ||| ||| | ||||| |||||||||||||| ||||| ||||
Sbjct: 162 ggagcagggcctggagcttggagatgagctcgttgatctcgtcctcggaga 112
>gb|CW274970.1|CW274970 104_748_11404711_116_35378_030 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404711, DNA
sequence
Length = 717
Score = 210 bits (106), Expect = 1e-052
Identities = 142/154 (92%)
Strand = Plus / Minus
Query: 498 agcggaggaggctgcggatgatctcggcgccggggctgttgtggtccatgctggccatga 557
||||||||| |||||||||||| || ||||||||||||||||||||||| ||| ||| |
Sbjct: 461 agcggaggatgctgcggatgatttccgcgccggggctgttgtggtccatagtggacatca 402
Query: 558 ggtccgacaggcggtcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgc 617
|||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 401 ggtccgacagccggtcgctcaggtcgtcgacctcccggtggaggctcttgatgtagctgc 342
Query: 618 aggtctccttgagcagcttcgtcgtcgacgcctg 651
|||||||||| |||||||||||||||||||||||
Sbjct: 341 aggtctccttcagcagcttcgtcgtcgacgcctg 308
Score = 52.0 bits (26), Expect = 8e-005
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 662 cggcggcgcgcgctggggagcagcgtctgcagcctcgagataagctcgttgatctcctcc 721
|||||||| | |||||||||||| | ||| ||| | ||||| |||||||||||||| |||
Sbjct: 65 cggcggcgggagctggggagcagggcctggagcttggagatgagctcgttgatctcgtcc 6
Query: 722 tc 723
||
Sbjct: 5 tc 4
>gb|CW277504.1|CW277504 104_751_11406063_148_35413_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11406063, DNA
sequence
Length = 707
Score = 210 bits (106), Expect = 1e-052
Identities = 142/154 (92%)
Strand = Plus / Minus
Query: 498 agcggaggaggctgcggatgatctcggcgccggggctgttgtggtccatgctggccatga 557
||||||||| |||||||||||| || ||||||||||||||||||||||| ||| ||| |
Sbjct: 192 agcggaggatgctgcggatgatttccgcgccggggctgttgtggtccatagtggacatca 133
Query: 558 ggtccgacaggcggtcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgc 617
|||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 132 ggtccgacagccggtcgctcaggtcgtcgacctcccggtggaggctcttgatgtagctgc 73
Query: 618 aggtctccttgagcagcttcgtcgtcgacgcctg 651
|||||||||| |||||||||||||||||||||||
Sbjct: 72 aggtctccttcagcagcttcgtcgtcgacgcctg 39
>gb|CW281385.1|CW281385 104_757_11408148_148_35460_048 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11408148, DNA
sequence
Length = 634
Score = 210 bits (106), Expect = 1e-052
Identities = 142/154 (92%)
Strand = Plus / Plus
Query: 498 agcggaggaggctgcggatgatctcggcgccggggctgttgtggtccatgctggccatga 557
||||||||| |||||||||||| || ||||||||||||||||||||||| ||| ||| |
Sbjct: 225 agcggaggatgctgcggatgatttccgcgccggggctgttgtggtccatagtggacatca 284
Query: 558 ggtccgacaggcggtcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgc 617
|||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 285 ggtccgacagccggtcgctcaggtcgtcgacctcccggtggaggctcttgatgtagctgc 344
Query: 618 aggtctccttgagcagcttcgtcgtcgacgcctg 651
|||||||||| |||||||||||||||||||||||
Sbjct: 345 aggtctccttcagcagcttcgtcgtcgacgcctg 378
>gb|CW295944.1|CW295944 104_777_11461223_148_35624_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11461223, DNA
sequence
Length = 603
Score = 210 bits (106), Expect = 1e-052
Identities = 142/154 (92%)
Strand = Plus / Plus
Query: 498 agcggaggaggctgcggatgatctcggcgccggggctgttgtggtccatgctggccatga 557
||||||||| |||||||||||| || ||||||||||||||||||||||| ||| ||| |
Sbjct: 238 agcggaggatgctgcggatgatttccgcgccggggctgttgtggtccatagtggacatca 297
Query: 558 ggtccgacaggcggtcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgc 617
|||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 298 ggtccgacagccggtcgctcaggtcgtcgacctcccggtggaggctcttgatgtagctgc 357
Query: 618 aggtctccttgagcagcttcgtcgtcgacgcctg 651
|||||||||| |||||||||||||||||||||||
Sbjct: 358 aggtctccttcagcagcttcgtcgtcgacgcctg 391
>gb|CW465791.1|CW465791 fsbb001f216l12k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f216l12, DNA
sequence
Length = 644
Score = 210 bits (106), Expect = 1e-052
Identities = 142/154 (92%)
Strand = Plus / Plus
Query: 498 agcggaggaggctgcggatgatctcggcgccggggctgttgtggtccatgctggccatga 557
||||||||| |||||||||||| || ||||||||||||||||||||||| ||| ||| |
Sbjct: 6 agcggaggatgctgcggatgatttccgcgccggggctgttgtggtccatagtggacatca 65
Query: 558 ggtccgacaggcggtcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgc 617
|||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 66 ggtccgacagccggtcgctcaggtcgtcgacctcccggtggaggctcttgatgtagctgc 125
Query: 618 aggtctccttgagcagcttcgtcgtcgacgcctg 651
|||||||||| |||||||||||||||||||||||
Sbjct: 126 aggtctccttcagcagcttcgtcgtcgacgcctg 159
Score = 54.0 bits (27), Expect = 2e-005
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 662 cggcggcgcgcgctggggagcagcgtctgcagcctcgagataagctcgttgatctcctcc 721
|||||||| | |||||||||||| | ||| ||| | ||||| |||||||||||||| |||
Sbjct: 402 cggcggcgggagctggggagcagggcctggagcttggagatgagctcgttgatctcgtcc 461
Query: 722 tccgaga 728
|| ||||
Sbjct: 462 tcggaga 468
>gb|AW677456.1|AW677456 DG1_7_A12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 529
Score = 210 bits (106), Expect = 1e-052
Identities = 142/154 (92%)
Strand = Plus / Minus
Query: 498 agcggaggaggctgcggatgatctcggcgccggggctgttgtggtccatgctggccatga 557
||||||||| |||||||||||| || ||||||||||||||||||||||| ||| ||| |
Sbjct: 172 agcggaggatgctgcggatgatttccgcgccggggctgttgtggtccatagtggacatca 113
Query: 558 ggtccgacaggcggtcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgc 617
|||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 112 ggtccgacagccggtcgctcaggtcgtcgacctcccggtggaggctcttgatgtagctgc 53
Query: 618 aggtctccttgagcagcttcgtcgtcgacgcctg 651
|||||||||| |||||||||||||||||||||||
Sbjct: 52 aggtctccttcagcagcttcgtcgtcgacgcctg 19
>gb|CW106693.1|CW106693 104_476_11096128_116_34467_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11096128, DNA
sequence
Length = 647
Score = 163 bits (82), Expect = 3e-038
Identities = 105/112 (93%), Gaps = 3/112 (2%)
Strand = Plus / Minus
Query: 652 gctgccgccacggcggcgcgcgctggggagcagcgtctgcagcctcgagataagctcgtt 711
||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||
Sbjct: 467 gctgccgccacggcggcgcgcgctggggagcagcgtctggagcctggagatgagctcgtt 408
Query: 712 gatctcctcctccgagaccgtcgacgcgcgggacctccggctcgacatcgtc 763
||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 407 gatctcctcctccgacac---cgacgcgcgggacctccggctcgacatcgtc 359
>gb|CW106694.1|CW106694 104_476_11096128_148_34463_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11096128, DNA
sequence
Length = 586
Score = 163 bits (82), Expect = 3e-038
Identities = 105/112 (93%), Gaps = 3/112 (2%)
Strand = Plus / Plus
Query: 652 gctgccgccacggcggcgcgcgctggggagcagcgtctgcagcctcgagataagctcgtt 711
||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||
Sbjct: 266 gctgccgccacggcggcgcgcgctggggagcagcgtctggagcctggagatgagctcgtt 325
Query: 712 gatctcctcctccgagaccgtcgacgcgcgggacctccggctcgacatcgtc 763
||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 326 gatctcctcctccgacac---cgacgcgcgggacctccggctcgacatcgtc 374
>gb|CW360356.1|CW360356 fsbb001f028g13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f028g13, DNA
sequence
Length = 647
Score = 163 bits (82), Expect = 3e-038
Identities = 105/112 (93%), Gaps = 3/112 (2%)
Strand = Plus / Minus
Query: 652 gctgccgccacggcggcgcgcgctggggagcagcgtctgcagcctcgagataagctcgtt 711
||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||
Sbjct: 470 gctgccgccacggcggcgcgcgctggggagcagcgtctggagcctggagatgagctcgtt 411
Query: 712 gatctcctcctccgagaccgtcgacgcgcgggacctccggctcgacatcgtc 763
||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 410 gatctcctcctccgacac---cgacgcgcgggacctccggctcgacatcgtc 362
>gb|CW477234.1|CW477234 fsbb001f234h16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f234h16, DNA
sequence
Length = 509
Score = 159 bits (80), Expect = 5e-037
Identities = 103/110 (93%), Gaps = 3/110 (2%)
Strand = Plus / Minus
Query: 652 gctgccgccacggcggcgcgcgctggggagcagcgtctgcagcctcgagataagctcgtt 711
||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||
Sbjct: 124 gctgccgccacggcggcgcgcgctggggagcagcgtctggagcctggagatgagctcgtt 65
Query: 712 gatctcctcctccgagaccgtcgacgcgcgggacctccggctcgacatcg 761
||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 64 gatctcctcctccgacac---cgacgcgcgggacctccggctcgacatcg 18
Score = 133 bits (67), Expect = 3e-029
Identities = 70/71 (98%)
Strand = Plus / Minus
Query: 581 tcgtccacctcccggtgcaggctcttgatgtagctgcaggtctccttgagcagcttcgtc 640
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 506 tcgtccacctcccggtgcaggctcttgatgtaggtgcaggtctccttgagcagcttcgtc 447
Query: 641 gtcgacgcctg 651
|||||||||||
Sbjct: 446 gtcgacgcctg 436
>gb|CW144697.1|CW144697 104_537_11138079_116_34972_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11138079, DNA
sequence
Length = 632
Score = 157 bits (79), Expect = 2e-036
Identities = 112/123 (91%)
Strand = Plus / Minus
Query: 498 agcggaggaggctgcggatgatctcggcgccggggctgttgtggtccatgctggccatga 557
||||||||| |||||||||||| || ||||||||||||||||||||||| ||| ||| |
Sbjct: 123 agcggaggatgctgcggatgatttccgcgccggggctgttgtggtccatagtggacatca 64
Query: 558 ggtccgacaggcggtcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgc 617
|||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 63 ggtccgacagccggtcgctcaggtcgtcgacctcccggtggaggctcttgatgtagctgc 4
Query: 618 agg 620
|||
Sbjct: 3 agg 1
>gb|BZ693575.1|BZ693575 SP__Ba0036F01.r SP__Ba Sorghum propinquum genomic clone
SP__Ba0036F01 3', DNA sequence
Length = 1185
Score = 95.6 bits (48), Expect = 6e-018
Identities = 87/100 (87%)
Strand = Plus / Plus
Query: 498 agcggaggaggctgcggatgatctcggcgccggggctgttgtggtccatgctggccatga 557
||||||||| |||||||||||| || ||||||||||||||||||||||| ||| ||| |
Sbjct: 358 agcggaggatgctgcggatgatttccgcgccggggctgttgtggtccatagtggacatca 417
Query: 558 ggtccgacaggcggtcgctcagatcgtccacctcccggtg 597
|||||||||||||||| |||| ||| | | |||||||||
Sbjct: 418 tgtccgacaggcggtcggtcaggtcgacgaactcccggtg 457
>gb|CW787576.1|CW787576 SP__Ba0036F01.r SP__Ba Sorghum propinquum genomic clone
SP__Ba0036F01 3', DNA sequence
Length = 434
Score = 95.6 bits (48), Expect = 6e-018
Identities = 87/100 (87%)
Strand = Plus / Plus
Query: 498 agcggaggaggctgcggatgatctcggcgccggggctgttgtggtccatgctggccatga 557
||||||||| |||||||||||| || ||||||||||||||||||||||| ||| ||| |
Sbjct: 310 agcggaggatgctgcggatgatttccgcgccggggctgttgtggtccatagtggacatca 369
Query: 558 ggtccgacaggcggtcgctcagatcgtccacctcccggtg 597
|||||||||||||||| |||| ||| | | |||||||||
Sbjct: 370 tgtccgacaggcggtcggtcaggtcgacgaactcccggtg 409
>gb|CW295943.1|CW295943 104_777_11461223_116_35620_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11461223, DNA
sequence
Length = 641
Score = 89.7 bits (45), Expect = 4e-016
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 599 aggctcttgatgtagctgcaggtctccttgagcagcttcgtcgtcgacgcctg 651
||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 638 aggctcttgatgtagctgcaggtctccttcagcagcgtcgtcgtcgacgcctg 586
Score = 54.0 bits (27), Expect = 2e-005
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 662 cggcggcgcgcgctggggagcagcgtctgcagcctcgagataagctcgttgatctcctcc 721
|||||||| | |||||||||||| | ||| ||| | ||||| |||||||||||||| |||
Sbjct: 343 cggcggcgggagctggggagcagggcctggagcttggagatgagctcgttgatctcgtcc 284
Query: 722 tccgaga 728
|| ||||
Sbjct: 283 tcggaga 277
>gb|CL173039.1|CL173039 104_376_10890604_116_31795_124 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10890604, DNA
sequence
Length = 714
Score = 79.8 bits (40), Expect = 3e-013
Identities = 121/148 (81%)
Strand = Plus / Minus
Query: 500 cggaggaggctgcggatgatctcggcgccggggctgttgtggtccatgctggccatgagg 559
||||||||||| |||||||||||||| ||||||| || ||||||| | | ||||||
Sbjct: 547 cggaggaggctccggatgatctcggcctgtgggctgtcgttgtccatggtcgacatgagc 488
Query: 560 tccgacaggcggtcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgcag 619
||||||| || || || ||||||||||||||||||||||||||||||||| ||
Sbjct: 487 cccgacagccgttccgagaggtcgtccacctcccggtgcaggctcttgatgtaggcacac 428
Query: 620 gtctccttgagcagcttcgtcgtcgacg 647
|||||||| || ||||||| || |||||
Sbjct: 427 gtctccttcagaagcttcgacgccgacg 400
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 677 gggagcagcgtctgcagcctcgagataagctcgttgatctc 717
|||||||||| ||||||| | ||||| ||||||||||||||
Sbjct: 130 gggagcagcgcctgcagcttggagatgagctcgttgatctc 90
>gb|CW099509.1|CW099509 104_466_11003588_148_34377_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11003588, DNA
sequence
Length = 713
Score = 79.8 bits (40), Expect = 3e-013
Identities = 121/148 (81%)
Strand = Plus / Minus
Query: 500 cggaggaggctgcggatgatctcggcgccggggctgttgtggtccatgctggccatgagg 559
||||||||||| |||||||||||||| ||||||| || ||||||| | | ||||||
Sbjct: 231 cggaggaggctccggatgatctcggcctgtgggctgtcgttgtccatggtcgacatgagc 172
Query: 560 tccgacaggcggtcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgcag 619
||||||| || || || ||||||||||||||||||||||||||||||||| ||
Sbjct: 171 cccgacagccgttccgagaggtcgtccacctcccggtgcaggctcttgatgtaggcacac 112
Query: 620 gtctccttgagcagcttcgtcgtcgacg 647
|||||||| || ||||||| || |||||
Sbjct: 111 gtctccttcagaagcttcgacgccgacg 84
>gb|CW453023.1|CW453023 fsbb001f193n14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f193n14, DNA
sequence
Length = 580
Score = 79.8 bits (40), Expect = 3e-013
Identities = 121/148 (81%)
Strand = Plus / Plus
Query: 500 cggaggaggctgcggatgatctcggcgccggggctgttgtggtccatgctggccatgagg 559
||||||||||| |||||||||||||| ||||||| || ||||||| | | ||||||
Sbjct: 362 cggaggaggctccggatgatctcggcctgtgggctgtcgttgtccatggtcgacatgagc 421
Query: 560 tccgacaggcggtcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgcag 619
||||||| || || || ||||||||||||||||||||||||||||||||| ||
Sbjct: 422 cccgacagccgttccgagaggtcgtccacctcccggtgcaggctcttgatgtaggcacac 481
Query: 620 gtctccttgagcagcttcgtcgtcgacg 647
|||||||| || ||||||| || |||||
Sbjct: 482 gtctccttcagaagcttcgacgccgacg 509
>gb|CL162553.1|CL162553 104_355_10806495_116_31833_015 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10806495, DNA
sequence
Length = 578
Score = 75.8 bits (38), Expect = 5e-012
Identities = 95/114 (83%)
Strand = Plus / Minus
Query: 500 cggaggaggctgcggatgatctcggcgccggggctgttgtggtccatgctggccatgagg 559
||||||||||| |||||||||||||| ||||||| || ||||||| | | ||||||
Sbjct: 130 cggaggaggctccggatgatctcggcctgtgggctgtcgttgtccatggtcgacatgagc 71
Query: 560 tccgacaggcggtcgctcagatcgtccacctcccggtgcaggctcttgatgtag 613
||||||| || || || |||||||||||||||||||||||||||||||||
Sbjct: 70 cccgacagccgttccgagaggtcgtccacctcccggtgcaggctcttgatgtag 17
>gb|CW277503.1|CW277503 104_751_11406063_116_35409_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11406063, DNA
sequence
Length = 644
Score = 73.8 bits (37), Expect = 2e-011
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 498 agcggaggaggctgcggatgatctcggcgccggggctgttgtggtccat 546
||||||||| |||||||||||| || |||||||||||||||||||||||
Sbjct: 591 agcggaggatgctgcggatgatttccgcgccggggctgttgtggtccat 639
>gb|CL197378.1|CL197378 104_424_10943705_116_32339_075 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943705, DNA
sequence
Length = 585
Score = 69.9 bits (35), Expect = 3e-010
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 581 tcgtccacctcccggtgcaggctcttgatgtagctgcaggtctccttgagcagcttcgtc 640
||||||||||||||||||||||||||||||||| || |||||||| || ||||||| |
Sbjct: 4 tcgtccacctcccggtgcaggctcttgatgtaggcacacgtctccttcagaagcttcgac 63
Query: 641 gtcgacg 647
| |||||
Sbjct: 64 gccgacg 70
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 677 gggagcagcgtctgcagcctcgagataagctcgttgatctc 717
|||||||||| ||||||| | ||||| ||||||||||||||
Sbjct: 340 gggagcagcgcctgcagcttggagatgagctcgttgatctc 380
>gb|CW495938.1|CW495938 fsbb001f287o20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f287o20, DNA
sequence
Length = 755
Score = 69.9 bits (35), Expect = 3e-010
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 581 tcgtccacctcccggtgcaggctcttgatgtagctgcaggtctccttgagcagcttcgtc 640
||||||||||||||||||||||||||||||||| || |||||||| || ||||||| |
Sbjct: 740 tcgtccacctcccggtgcaggctcttgatgtaggcacacgtctccttcagaagcttcgac 681
Query: 641 gtcgacg 647
| |||||
Sbjct: 680 gccgacg 674
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 677 gggagcagcgtctgcagcctcgagataagctcgttgatctc 717
|||||||||| ||||||| | ||||| ||||||||||||||
Sbjct: 404 gggagcagcgcctgcagcttggagatgagctcgttgatctc 364
>gb|BZ339969.1|BZ339969 ic35h09.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic35h09 5', DNA sequence
Length = 717
Score = 67.9 bits (34), Expect = 1e-009
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 39 ctcgcggttggtcggttgtctgtcaaggaggaaacaactcgatccagaccacacatag 96
|||||||| |||||||||||||| |||| |||||||||||||||| ||||||| ||||
Sbjct: 251 ctcgcggtcggtcggttgtctgtgaagg-ggaaacaactcgatccggaccacagatag 195
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 146 caagagtacaaacaaatggaaaa 168
|||||||||||||||||| ||||
Sbjct: 132 caagagtacaaacaaatgaaaaa 110
>gb|BZ367149.1|BZ367149 id02f11.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone id02f11 5', DNA sequence
Length = 789
Score = 67.9 bits (34), Expect = 1e-009
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 39 ctcgcggttggtcggttgtctgtcaaggaggaaacaactcgatccagaccacacatag 96
|||||||| |||||||||||||| |||| |||||||||||||||| ||||||| ||||
Sbjct: 375 ctcgcggtcggtcggttgtctgtgaagg-ggaaacaactcgatccggaccacagatag 431
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 328 tatattcagctgctatatg 346
|||||||||||||||||||
Sbjct: 727 tatattcagctgctatatg 745
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 146 caagagtacaaacaaatggaaaa 168
|||||||||||||||||| ||||
Sbjct: 494 caagagtacaaacaaatgaaaaa 516
>gb|CL192385.1|CL192385 104_415_10940198_114_32259_061 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10940198, DNA
sequence
Length = 521
Score = 67.9 bits (34), Expect = 1e-009
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 582 cgtccacctcccggtgcaggctcttgatgtagctgcaggtctccttgagcagcttcgtcg 641
|||||||||||||||||||||||||||||||| || |||||||| || ||||||| ||
Sbjct: 521 cgtccacctcccggtgcaggctcttgatgtaggcacacgtctccttcagaagcttcgacg 462
Query: 642 tcgacg 647
|||||
Sbjct: 461 ccgacg 456
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 677 gggagcagcgtctgcagcctcgagataagctcgttgatctc 717
|||||||||| ||||||| | ||||| ||||||||||||||
Sbjct: 186 gggagcagcgcctgcagcttggagatgagctcgttgatctc 146
>gb|CW131294.1|CW131294 104_514_11115597_148_34790_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11115597, DNA
sequence
Length = 553
Score = 67.9 bits (34), Expect = 1e-009
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 39 ctcgcggttggtcggttgtctgtcaaggaggaaacaactcgatccagaccacacatag 96
|||||||| |||||||||||||| |||| |||||||||||||||| ||||||| ||||
Sbjct: 469 ctcgcggtcggtcggttgtctgtgaagg-ggaaacaactcgatccggaccacagatag 525
>gb|BZ368192.1|BZ368192 id11h08.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone id11h08 5', DNA sequence
Length = 709
Score = 61.9 bits (31), Expect = 8e-008
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 572 tcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgcaggtctcct 626
|||||||| |||||||||||| |||||| |||| |||||||| |||| |||||||
Sbjct: 611 tcgctcaggtcgtccacctcctggtgcaagctcctgatgtagttgcatgtctcct 665
>gb|CW050175.1|CW050175 104_289_10514492_114_30202 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10514492, DNA
sequence
Length = 601
Score = 61.9 bits (31), Expect = 8e-008
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 572 tcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgcaggtctcct 626
|||||||| |||||||||||| |||||| |||| |||||||| |||| |||||||
Sbjct: 459 tcgctcaggtcgtccacctcctggtgcaagctcctgatgtagttgcatgtctcct 513
>gb|CW093354.1|CW093354 104_456_10999729_114_33065_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10999729, DNA
sequence
Length = 471
Score = 61.9 bits (31), Expect = 8e-008
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 572 tcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgcaggtctcct 626
|||||||| |||||||||||| |||||| |||| |||||||| |||| |||||||
Sbjct: 377 tcgctcaggtcgtccacctcctggtgcaagctcctgatgtagttgcatgtctcct 323
>gb|CW110509.1|CW110509 104_483_11103751_148_34521_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11103751, DNA
sequence
Length = 706
Score = 61.9 bits (31), Expect = 8e-008
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 572 tcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgcaggtctcct 626
|||||||| |||||||||||| |||||| |||| |||||||| |||| |||||||
Sbjct: 622 tcgctcaggtcgtccacctcctggtgcaagctcctgatgtagttgcatgtctcct 676
>gb|CW124534.1|CW124534 104_504_11111834_116_34708_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11111834, DNA
sequence
Length = 690
Score = 61.9 bits (31), Expect = 8e-008
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 572 tcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgcaggtctcct 626
|||||||| |||||||||||| |||||| |||| |||||||| |||| |||||||
Sbjct: 511 tcgctcaggtcgtccacctcctggtgcaagctcctgatgtagttgcatgtctcct 457
>gb|CW230886.1|CW230886 104_680_11210834_116_37342_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11210834, DNA
sequence
Length = 682
Score = 61.9 bits (31), Expect = 8e-008
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 572 tcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgcaggtctcct 626
|||||||| |||||||||||| |||||| |||| |||||||| |||| |||||||
Sbjct: 463 tcgctcaggtcgtccacctcctggtgcaagctcctgatgtagttgcatgtctcct 409
>gb|CW416466.1|CW416466 fsbb001f117a09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f117a09, DNA
sequence
Length = 718
Score = 61.9 bits (31), Expect = 8e-008
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 572 tcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgcaggtctcct 626
|||||||| |||||||||||| |||||| |||| |||||||| |||| |||||||
Sbjct: 240 tcgctcaggtcgtccacctcctggtgcaagctcctgatgtagttgcatgtctcct 186
>gb|BF420938.1|BF420938 FM1_5_B10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 564
Score = 61.9 bits (31), Expect = 8e-008
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 572 tcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgcaggtctcct 626
|||||||| |||||||||||| |||||| |||| |||||||| |||| |||||||
Sbjct: 323 tcgctcaggtcgtccacctcctggtgcaagctcctgatgtagttgcatgtctcct 269
>gb|CN126308.1|CN126308 RHOH1_16_H09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_16_H09_A002 3', mRNA sequence
Length = 567
Score = 61.9 bits (31), Expect = 8e-008
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 572 tcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgcaggtctcct 626
|||||||| |||||||||||| |||||| |||| |||||||| |||| |||||||
Sbjct: 292 tcgctcaggtcgtccacctcctggtgcaagctcctgatgtagttgcatgtctcct 238
>gb|CX611827.1|CX611827 ANR1_27_A06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_27_A06_A002 3', mRNA sequence
Length = 646
Score = 61.9 bits (31), Expect = 8e-008
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 572 tcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgcaggtctcct 626
|||||||| |||||||||||| |||||| |||| |||||||| |||| |||||||
Sbjct: 371 tcgctcaggtcgtccacctcctggtgcaagctcctgatgtagttgcatgtctcct 317
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 743 gacctccggctcgacatc 760
||||||||||||||||||
Sbjct: 185 gacctccggctcgacatc 168
>gb|CX611914.1|CX611914 ANR1_27_A06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_27_A06_A002 5', mRNA sequence
Length = 645
Score = 61.9 bits (31), Expect = 8e-008
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 572 tcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgcaggtctcct 626
|||||||| |||||||||||| |||||| |||| |||||||| |||| |||||||
Sbjct: 345 tcgctcaggtcgtccacctcctggtgcaagctcctgatgtagttgcatgtctcct 291
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 743 gacctccggctcgacatc 760
||||||||||||||||||
Sbjct: 159 gacctccggctcgacatc 142
>gb|CW063460.1|CW063460 104_309_10522019_114_30134 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10522019, DNA
sequence
Length = 611
Score = 60.0 bits (30), Expect = 3e-007
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 498 agcggaggaggctgcggatgatctcggcgccggggctgttgt 539
||||||||| |||||||||||| || ||||||||||||||||
Sbjct: 570 agcggaggatgctgcggatgatttccgcgccggggctgttgt 611
>gb|CW334849.1|CW334849 104_833_11482718_148_36072_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11482718, DNA
sequence
Length = 665
Score = 58.0 bits (29), Expect = 1e-006
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 570 ggtcgctcagatcgtccacctcccggtgcaggctcttgatgtagctgcaggtctcct 626
||||||| || ||||| |||||||||||||||||| ||| |||||||| |||||||
Sbjct: 251 ggtcgctgaggtcgtcgacctcccggtgcaggctccggatatagctgcatgtctcct 307
>gb|CL176773.1|CL176773 104_383_10893351_116_31773_183 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10893351, DNA
sequence
Length = 186
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 583 gtccacctcccggtgcaggctcttgatgtagctgca 618
|||||||||| ||||||||||| |||||||||||||
Sbjct: 116 gtccacctcctggtgcaggctcctgatgtagctgca 81
>gb|CL187967.1|CL187967 104_404_10901266_114_32445_047 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10901266, DNA
sequence
Length = 728
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 583 gtccacctcccggtgcaggctcttgatgtagctgca 618
|||||||||| ||||||||||| |||||||||||||
Sbjct: 639 gtccacctcctggtgcaggctcctgatgtagctgca 674
>gb|CW200417.1|CW200417 104_626_11184054_116_36868_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11184054, DNA
sequence
Length = 697
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 583 gtccacctcccggtgcaggctcttgatgtagctgca 618
|||||||||| ||||||||||| |||||||||||||
Sbjct: 373 gtccacctcctggtgcaggctcctgatgtagctgca 338
>gb|CW259755.1|CW259755 104_726_11228601_148_35186_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11228601, DNA
sequence
Length = 685
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 583 gtccacctcccggtgcaggctcttgatgtagctgca 618
|||||||||| ||||||||||| |||||||||||||
Sbjct: 433 gtccacctcctggtgcaggctcctgatgtagctgca 398
>gb|CW276142.1|CW276142 104_749_11405332_116_35387_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405332, DNA
sequence
Length = 729
Score = 56.0 bits (28), Expect = 5e-006
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 583 gtccacctcccggtgcaggctcttgatgtagctgca 618
|||||||||| ||||||||||| |||||||||||||
Sbjct: 13 gtccacctcctggtgcaggctcctgatgtagctgca 48
>gb|CW063461.1|CW063461 104_309_10522019_115_30140 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10522019, DNA
sequence
Length = 567
Score = 54.0 bits (27), Expect = 2e-005
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 662 cggcggcgcgcgctggggagcagcgtctgcagcctcgagataagctcgttgatctcctcc 721
|||||||| | |||||||||||| | ||| ||| | ||||| |||||||||||||| |||
Sbjct: 350 cggcggcgggagctggggagcagggcctggagcttggagatgagctcgttgatctcgtcc 291
Query: 722 tccgaga 728
|| ||||
Sbjct: 290 tcggaga 284
>gb|CW281384.1|CW281384 104_757_11408148_116_35464_048 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11408148, DNA
sequence
Length = 622
Score = 54.0 bits (27), Expect = 2e-005
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 662 cggcggcgcgcgctggggagcagcgtctgcagcctcgagataagctcgttgatctcctcc 721
|||||||| | |||||||||||| | ||| ||| | ||||| |||||||||||||| |||
Sbjct: 379 cggcggcgggagctggggagcagggcctggagcttggagatgagctcgttgatctcgtcc 320
Query: 722 tccgaga 728
|| ||||
Sbjct: 319 tcggaga 313
>gb|CW465790.1|CW465790 fsbb001f216l12f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f216l12, DNA
sequence
Length = 704
Score = 54.0 bits (27), Expect = 2e-005
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 662 cggcggcgcgcgctggggagcagcgtctgcagcctcgagataagctcgttgatctcctcc 721
|||||||| | |||||||||||| | ||| ||| | ||||| |||||||||||||| |||
Sbjct: 463 cggcggcgggagctggggagcagggcctggagcttggagatgagctcgttgatctcgtcc 404
Query: 722 tccgaga 728
|| ||||
Sbjct: 403 tcggaga 397
>gb|CL194402.1|CL194402 104_418_10941606_114_32284_017 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10941606, DNA
sequence
Length = 501
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 677 gggagcagcgtctgcagcctcgagataagctcgttgatctc 717
|||||||||| ||||||| | ||||| ||||||||||||||
Sbjct: 86 gggagcagcgcctgcagcttggagatgagctcgttgatctc 126
>gb|CL197377.1|CL197377 104_424_10943705_114_32335_075 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943705, DNA
sequence
Length = 694
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 677 gggagcagcgtctgcagcctcgagataagctcgttgatctc 717
|||||||||| ||||||| | ||||| ||||||||||||||
Sbjct: 543 gggagcagcgcctgcagcttggagatgagctcgttgatctc 503
>gb|CW082432.1|CW082432 104_424_10943705_114_32384_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943705, DNA
sequence
Length = 714
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 677 gggagcagcgtctgcagcctcgagataagctcgttgatctc 717
|||||||||| ||||||| | ||||| ||||||||||||||
Sbjct: 541 gggagcagcgcctgcagcttggagatgagctcgttgatctc 501
>gb|CW152559.1|CW152559 104_553_11144556_148_36328_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11144556, DNA
sequence
Length = 677
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 677 gggagcagcgtctgcagcctcgagataagctcgttgatctc 717
|||||||||| ||||||| | ||||| ||||||||||||||
Sbjct: 262 gggagcagcgcctgcagcttggagatgagctcgttgatctc 302
>gb|CW028774.1|CW028774 104_256_10499295_114_30399 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499295, DNA
sequence
Length = 753
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 583 gtccacctcccggtgcaggctcttgatgtagctgca 618
|||||||||| |||||| |||| |||||||||||||
Sbjct: 26 gtccacctcctggtgcaagctcctgatgtagctgca 61
>gb|CL178164.1|CL178164 104_386_10894367_116_31912_047 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894367, DNA
sequence
Length = 490
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 468 gccggccggccggacggacggac 490
|||||||||||||||||||||||
Sbjct: 167 gccggccggccggacggacggac 189
Score = 40.1 bits (20), Expect = 0.29
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 467 ggccggccggccggacggacggac 490
|||||||||| |||||||||||||
Sbjct: 170 ggccggccggacggacggacggac 193
>gb|CW034871.1|CW034871 104_265_10502819_114_30378 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502819, DNA
sequence
Length = 739
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 468 gccggccggccggacggacggac 490
|||||||||||||||||||||||
Sbjct: 239 gccggccggccggacggacggac 217
Score = 40.1 bits (20), Expect = 0.29
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 467 ggccggccggccggacggacggac 490
|||||||||| |||||||||||||
Sbjct: 236 ggccggccggacggacggacggac 213
>gb|CW220316.1|CW220316 104_654_11197285_148_37150_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11197285, DNA
sequence
Length = 611
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 468 gccggccggccggacggacggac 490
|||||||||||||||||||||||
Sbjct: 46 gccggccggccggacggacggac 24
>gb|CL192386.1|CL192386 104_415_10940198_116_32263_061 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10940198, DNA
sequence
Length = 609
Score = 44.1 bits (22), Expect = 0.019
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 500 cggaggaggctgcggatgatctcggc 525
||||||||||| ||||||||||||||
Sbjct: 534 cggaggaggctccggatgatctcggc 559
>gb|CW259754.1|CW259754 104_726_11228601_116_35190_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11228601, DNA
sequence
Length = 700
Score = 44.1 bits (22), Expect = 0.019
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 589 ctcccggtgcaggctcttgatgtagctgca 618
|||| ||||||||||| |||||||||||||
Sbjct: 664 ctcctggtgcaggctcctgatgtagctgca 693
>gb|CL153212.1|CL153212 104_337_10780563_114_31367_195 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10780563, DNA
sequence
Length = 452
Score = 42.1 bits (21), Expect = 0.074
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 468 gccggccggccggacggacgg 488
|||||||||||||||||||||
Sbjct: 242 gccggccggccggacggacgg 262
>gb|CW037016.1|CW037016 104_268_10504094_114_30381 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504094, DNA
sequence
Length = 536
Score = 42.1 bits (21), Expect = 0.074
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 468 gccggccggccggacggacgg 488
|||||||||||||||||||||
Sbjct: 51 gccggccggccggacggacgg 31
>gb|CW049818.1|CW049818 104_289_10514279_115_30204 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10514279, DNA
sequence
Length = 551
Score = 42.1 bits (21), Expect = 0.074
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 468 gccggccggccggacggacgg 488
|||||||||||||||||||||
Sbjct: 429 gccggccggccggacggacgg 409
>gb|CW158940.1|CW158940 104_564_11149093_116_36399_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149093, DNA
sequence
Length = 671
Score = 42.1 bits (21), Expect = 0.074
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 468 gccggccggccggacggacgg 488
|||||||||||||||||||||
Sbjct: 19 gccggccggccggacggacgg 39
>gb|CW168263.1|CW168263 104_577_11154050_148_36493_001 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11154050, DNA
sequence
Length = 723
Score = 42.1 bits (21), Expect = 0.074
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 465 gtggccggccggccggacggacgga 489
|||||||||||||||| ||||||||
Sbjct: 9 gtggccggccggccggccggacgga 33
>gb|CL697325.2|CL697325 SP__Ba0009K05.r SP__Ba Sorghum propinquum genomic clone
SP__Ba0009K05 3', DNA sequence
Length = 732
Score = 42.1 bits (21), Expect = 0.074
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 421 gagagagacagcgcgcgcgca 441
|||||||||||||||||||||
Sbjct: 677 gagagagacagcgcgcgcgca 697
>gb|CL157482.1|CL157482 104_345_10783607_114_31477_167 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10783607, DNA
sequence
Length = 612
Score = 40.1 bits (20), Expect = 0.29
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 572 tcgctcagatcgtccacctcccggtgca 599
|||||||| |||||||||||| ||||||
Sbjct: 582 tcgctcaggtcgtccacctcctggtgca 609
>gb|CL181600.1|CL181600 104_392_10896861_116_31926_237 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10896861, DNA
sequence
Length = 502
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 469 ccggccggccggacggacgg 488
||||||||||||||||||||
Sbjct: 251 ccggccggccggacggacgg 232
>gb|CL181601.1|CL181601 104_392_10896861_148_31925_237 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10896861, DNA
sequence
Length = 689
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 469 ccggccggccggacggacgg 488
||||||||||||||||||||
Sbjct: 637 ccggccggccggacggacgg 656
>gb|CL184682.1|CL184682 104_398_10899018_116_32373_077 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899018, DNA
sequence
Length = 518
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 467 ggccggccggccggacggac 486
||||||||||||||||||||
Sbjct: 68 ggccggccggccggacggac 87
Score = 36.2 bits (18), Expect = 4.6
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 469 ccggccggccggacggacggac 490
|||||||||||| |||||||||
Sbjct: 66 ccggccggccggccggacggac 87
>gb|CL190340.1|CL190340 104_408_10906015_116_32503_026 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10906015, DNA
sequence
Length = 792
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 470 cggccggccggacggacgga 489
||||||||||||||||||||
Sbjct: 386 cggccggccggacggacgga 405
>gb|CW067150.1|CW067150 104_314_10524089_114_30123 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10524089, DNA
sequence
Length = 458
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 469 ccggccggccggacggacgg 488
||||||||||||||||||||
Sbjct: 357 ccggccggccggacggacgg 376
>gb|CW070423.1|CW070423 104_321_10526744_1_30090 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10526744, DNA
sequence
Length = 630
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 469 ccggccggccggacggacgg 488
||||||||||||||||||||
Sbjct: 575 ccggccggccggacggacgg 594
>gb|CW107038.1|CW107038 104_477_11096337_148_34472_047 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11096337, DNA
sequence
Length = 288
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 264 tacggagtagtacttaataa 283
||||||||||||||||||||
Sbjct: 153 tacggagtagtacttaataa 134
>gb|CW125417.1|CW125417 104_505_11112316_148_34712_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11112316, DNA
sequence
Length = 369
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 469 ccggccggccggacggacgg 488
||||||||||||||||||||
Sbjct: 242 ccggccggccggacggacgg 261
>gb|CW135845.1|CW135845 104_520_11118063_116_34836_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11118063, DNA
sequence
Length = 608
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 469 ccggccggccggacggacgg 488
||||||||||||||||||||
Sbjct: 235 ccggccggccggacggacgg 254
>gb|CW200043.1|CW200043 104_625_11183840_116_36864_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11183840, DNA
sequence
Length = 303
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 264 tacggagtagtacttaataa 283
||||||||||||||||||||
Sbjct: 147 tacggagtagtacttaataa 166
>gb|CW204230.1|CW204230 104_632_11186432_116_36924_030 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11186432, DNA
sequence
Length = 464
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 264 tacggagtagtacttaataa 283
||||||||||||||||||||
Sbjct: 323 tacggagtagtacttaataa 342
>gb|CW253583.1|CW253583 104_717_11225174_116_35113_059 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11225174, DNA
sequence
Length = 641
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 468 gccggccggccggacggacg 487
||||||||||||||||||||
Sbjct: 219 gccggccggccggacggacg 200
>gb|CW448040.1|CW448040 fsbb001f181h09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f181h09, DNA
sequence
Length = 558
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 469 ccggccggccggacggacgg 488
||||||||||||||||||||
Sbjct: 296 ccggccggccggacggacgg 277
>gb|CL152031.1|CL152031 104_335_10779672_114_31363_072 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779672, DNA
sequence
Length = 590
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 466 tggccggccggccggacggacgg 488
||||||| |||||||||||||||
Sbjct: 452 tggccggacggccggacggacgg 430
>gb|CL167283.1|CL167283 104_364_10809962_114_31802_026 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809962, DNA
sequence
Length = 594
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 465 gtggccggccggccggacg 483
|||||||||||||||||||
Sbjct: 124 gtggccggccggccggacg 142
>gb|CW036393.1|CW036393 104_267_10503733_115_30375 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10503733, DNA
sequence
Length = 581
Score = 38.2 bits (19), Expect = 1.2
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 421 gagagagacagcgcgcgcgcaga 443
|||||||| ||||||||||||||
Sbjct: 389 gagagagagagcgcgcgcgcaga 411
>gb|CW056698.1|CW056698 104_298_10517821_115_30157 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10517821, DNA
sequence
Length = 525
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 465 gtggccggccggccggacg 483
|||||||||||||||||||
Sbjct: 323 gtggccggccggccggacg 341
>gb|CW057135.1|CW057135 104_299_10518059_114_30169 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518059, DNA
sequence
Length = 433
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 656 ccgccacggcggcgcgcgc 674
|||||||||||||||||||
Sbjct: 81 ccgccacggcggcgcgcgc 63
>gb|CW095561.1|CW095561 104_460_11001392_116_34327_020 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11001392, DNA
sequence
Length = 524
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 723 ccgagaccgtcgacgcgcg 741
|||||||||||||||||||
Sbjct: 503 ccgagaccgtcgacgcgcg 521
>gb|CW097344.1|CW097344 104_463_11002405_116_34346_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002405, DNA
sequence
Length = 686
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 465 gtggccggccggccggacg 483
|||||||||||||||||||
Sbjct: 585 gtggccggccggccggacg 603
>gb|CW186408.1|CW186408 104_604_11166551_116_36705_090 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11166551, DNA
sequence
Length = 612
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 470 cggccggccggacggacgg 488
|||||||||||||||||||
Sbjct: 537 cggccggccggacggacgg 555
>gb|CW186409.1|CW186409 104_604_11166551_148_36706_090 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11166551, DNA
sequence
Length = 714
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 470 cggccggccggacggacgg 488
|||||||||||||||||||
Sbjct: 263 cggccggccggacggacgg 245
>gb|CW194174.1|CW194174 104_617_11179959_116_36787_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11179959, DNA
sequence
Length = 611
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 470 cggccggccggacggacgg 488
|||||||||||||||||||
Sbjct: 22 cggccggccggacggacgg 4
>gb|CW222764.1|CW222764 104_658_11202550_148_37179_089 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11202550, DNA
sequence
Length = 692
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 218 aagagagagagaaaccgta 236
|||||||||||||||||||
Sbjct: 621 aagagagagagaaaccgta 639
>gb|CW235543.1|CW235543 104_690_11215037_116_37409_017 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11215037, DNA
sequence
Length = 709
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 466 tggccggccggccggacgg 484
|||||||||||||||||||
Sbjct: 660 tggccggccggccggacgg 678
>gb|CW235544.1|CW235544 104_690_11215037_148_37413_017 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11215037, DNA
sequence
Length = 715
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 466 tggccggccggccggacgg 484
|||||||||||||||||||
Sbjct: 57 tggccggccggccggacgg 39
>gb|CW296149.1|CW296149 104_777_11461338_116_35623_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11461338, DNA
sequence
Length = 675
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 656 ccgccacggcggcgcgcgc 674
|||||||||||||||||||
Sbjct: 342 ccgccacggcggcgcgcgc 360
>gb|CW296150.1|CW296150 104_777_11461338_148_35627_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11461338, DNA
sequence
Length = 585
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 656 ccgccacggcggcgcgcgc 674
|||||||||||||||||||
Sbjct: 464 ccgccacggcggcgcgcgc 446
>gb|CW322977.1|CW322977 104_817_11476390_148_35959_095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476390, DNA
sequence
Length = 568
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 470 cggccggccggacggacgg 488
|||||||||||||||||||
Sbjct: 409 cggccggccggacggacgg 427
>gb|CW329385.1|CW329385 104_825_11479817_148_36000_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11479817, DNA
sequence
Length = 674
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 656 ccgccacggcggcgcgcgc 674
|||||||||||||||||||
Sbjct: 48 ccgccacggcggcgcgcgc 66
>gb|CW390943.1|CW390943 fsbb001f076n11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f076n11, DNA
sequence
Length = 541
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 656 ccgccacggcggcgcgcgc 674
|||||||||||||||||||
Sbjct: 257 ccgccacggcggcgcgcgc 275
>gb|CW430589.1|CW430589 fsbb001f144f18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f144f18, DNA
sequence
Length = 618
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 465 gtggccggccggccggacg 483
|||||||||||||||||||
Sbjct: 326 gtggccggccggccggacg 344
>gb|CW437435.1|CW437435 fsbb001f154i20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f154i20, DNA
sequence
Length = 705
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 656 ccgccacggcggcgcgcgc 674
|||||||||||||||||||
Sbjct: 275 ccgccacggcggcgcgcgc 293
>gb|BE592517.1|BE592517 WS1_94_A10.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 278
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 470 cggccggccggacggacgg 488
|||||||||||||||||||
Sbjct: 55 cggccggccggacggacgg 73
>gb|BM322539.1|BM322539 PIC1_6_B01.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 595
Score = 38.2 bits (19), Expect = 1.2
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 656 ccgccacggcggcgcgcgc 674
|||||||||||||||||||
Sbjct: 315 ccgccacggcggcgcgcgc 297
>gb|BH245887.1|BH245887 pSB1458.1 S. bicolor BTx623 PstI-digested total genomic DNA library
Sorghum bicolor genomic clone pSB1458, DNA sequence
Length = 484
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 465 gtggccggccggccggac 482
||||||||||||||||||
Sbjct: 412 gtggccggccggccggac 429
>gb|BZ337119.1|BZ337119 ia85d06.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ia85d06 5', DNA sequence
Length = 330
Score = 36.2 bits (18), Expect = 4.6
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 655 gccgccacggcggcgcgcgctg 676
|||||||| |||||||||||||
Sbjct: 81 gccgccaccgcggcgcgcgctg 60
>gb|BZ340916.1|BZ340916 ic41h05.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic41h05 5', DNA sequence
Length = 649
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 467 ggccggccggccggacgg 484
||||||||||||||||||
Sbjct: 275 ggccggccggccggacgg 292
Score = 36.2 bits (18), Expect = 4.6
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 467 ggccggccggccggacggacgg 488
|||||||||||||| |||||||
Sbjct: 271 ggccggccggccggccggacgg 292
>gb|BZ694376.1|BZ694376 SP__Ba0046D20.r SP__Ba Sorghum propinquum genomic clone
SP__Ba0046D20 3', DNA sequence
Length = 767
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 404 gccgtcgtccatggatgg 421
||||||||||||||||||
Sbjct: 116 gccgtcgtccatggatgg 133
>gb|CL150869.1|CL150869 104_333_10778839_114_31359_007 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10778839, DNA
sequence
Length = 708
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 462 cgcgtggccggccggccg 479
||||||||||||||||||
Sbjct: 404 cgcgtggccggccggccg 387
>gb|CL151079.1|CL151079 104_333_10778994_114_31359_162 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10778994, DNA
sequence
Length = 745
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 473 ccggccggacggacggac 490
||||||||||||||||||
Sbjct: 307 ccggccggacggacggac 324
>gb|CL151080.1|CL151080 104_333_10778994_116_31360_162 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10778994, DNA
sequence
Length = 729
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 473 ccggccggacggacggac 490
||||||||||||||||||
Sbjct: 479 ccggccggacggacggac 462
>gb|CL157483.1|CL157483 104_345_10783607_116_31478_167 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10783607, DNA
sequence
Length = 516
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 743 gacctccggctcgacatc 760
||||||||||||||||||
Sbjct: 132 gacctccggctcgacatc 115
>gb|CL168706.1|CL168706 104_366_10811022_148_31806_318 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10811022, DNA
sequence
Length = 726
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 334 cagctgctatatgcatgg 351
||||||||||||||||||
Sbjct: 432 cagctgctatatgcatgg 449
>gb|CL176127.1|CL176127 104_382_10892917_116_31763_133 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10892917, DNA
sequence
Length = 704
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 463 gcgtggccggccggccgg 480
||||||||||||||||||
Sbjct: 686 gcgtggccggccggccgg 703
>gb|CL178158.1|CL178158 104_386_10894363_116_31912_043 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894363, DNA
sequence
Length = 592
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 479 ggacggacggacttgggc 496
||||||||||||||||||
Sbjct: 494 ggacggacggacttgggc 511
>gb|CL178159.1|CL178159 104_386_10894363_148_31911_043 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894363, DNA
sequence
Length = 736
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 479 ggacggacggacttgggc 496
||||||||||||||||||
Sbjct: 381 ggacggacggacttgggc 364
>gb|CL181438.1|CL181438 104_392_10896754_116_31926_130 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10896754, DNA
sequence
Length = 570
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 653 ctgccgccacggcggcgc 670
||||||||||||||||||
Sbjct: 426 ctgccgccacggcggcgc 443
>gb|CL181439.1|CL181439 104_392_10896754_148_31925_130 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10896754, DNA
sequence
Length = 699
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 653 ctgccgccacggcggcgc 670
||||||||||||||||||
Sbjct: 485 ctgccgccacggcggcgc 468
>gb|CL186759.1|CL186759 104_401_10900418_116_32411_001 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10900418, DNA
sequence
Length = 428
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 463 gcgtggccggccggccgg 480
||||||||||||||||||
Sbjct: 255 gcgtggccggccggccgg 238
>gb|CW029569.1|CW029569 104_257_10499751_114_30401 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499751, DNA
sequence
Length = 521
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 629 agcagcttcgtcgtcgac 646
||||||||||||||||||
Sbjct: 438 agcagcttcgtcgtcgac 455
>gb|CW029571.1|CW029571 104_257_10499752_114_30401 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499752, DNA
sequence
Length = 730
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 629 agcagcttcgtcgtcgac 646
||||||||||||||||||
Sbjct: 387 agcagcttcgtcgtcgac 404
>gb|CW040842.1|CW040842 104_274_10506308_114_30470 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506308, DNA
sequence
Length = 572
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 479 ggacggacggacttgggc 496
||||||||||||||||||
Sbjct: 142 ggacggacggacttgggc 159
>gb|CW047773.1|CW047773 104_285_10512882_114_30216 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10512882, DNA
sequence
Length = 490
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 479 ggacggacggacttgggc 496
||||||||||||||||||
Sbjct: 303 ggacggacggacttgggc 320
>gb|CW048574.1|CW048574 104_287_10513482_114_30211 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10513482, DNA
sequence
Length = 551
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 467 ggccggccggccggacgg 484
||||||||||||||||||
Sbjct: 178 ggccggccggccggacgg 195
>gb|CW049431.1|CW049431 104_288_10514022_115_30199 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10514022, DNA
sequence
Length = 450
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 473 ccggccggacggacggac 490
||||||||||||||||||
Sbjct: 388 ccggccggacggacggac 371
>gb|CW049513.1|CW049513 104_288_10514072_114_30200 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10514072, DNA
sequence
Length = 597
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 465 gtggccggccggccggac 482
||||||||||||||||||
Sbjct: 207 gtggccggccggccggac 190
>gb|CW049969.1|CW049969 104_289_10514371_114_30202 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10514371, DNA
sequence
Length = 307
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 463 gcgtggccggccggccgg 480
||||||||||||||||||
Sbjct: 230 gcgtggccggccggccgg 213
>gb|CW090158.1|CW090158 104_435_10949121_114_32596_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10949121, DNA
sequence
Length = 751
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 461 gcgcgtggccggccggcc 478
||||||||||||||||||
Sbjct: 460 gcgcgtggccggccggcc 477
>gb|CW090159.1|CW090159 104_435_10949121_116_32594_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10949121, DNA
sequence
Length = 754
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 461 gcgcgtggccggccggcc 478
||||||||||||||||||
Sbjct: 673 gcgcgtggccggccggcc 656
>gb|CW110508.1|CW110508 104_483_11103751_116_34517_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11103751, DNA
sequence
Length = 652
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 743 gacctccggctcgacatc 760
||||||||||||||||||
Sbjct: 223 gacctccggctcgacatc 206
>gb|CW130581.1|CW130581 104_513_11115194_148_34779_013 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11115194, DNA
sequence
Length = 667
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 479 ggacggacggacttgggc 496
||||||||||||||||||
Sbjct: 407 ggacggacggacttgggc 424
>gb|CW144090.1|CW144090 104_536_11137759_148_34962_030 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11137759, DNA
sequence
Length = 753
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 479 ggacggacggacttgggc 496
||||||||||||||||||
Sbjct: 358 ggacggacggacttgggc 341
>gb|CW146339.1|CW146339 104_539_11138941_148_34984_059 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11138941, DNA
sequence
Length = 669
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 467 ggccggccggccggacgg 484
||||||||||||||||||
Sbjct: 176 ggccggccggccggacgg 193
>gb|CW147850.1|CW147850 104_542_11140106_116_35003_011 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11140106, DNA
sequence
Length = 709
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 462 cgcgtggccggccggccg 479
||||||||||||||||||
Sbjct: 476 cgcgtggccggccggccg 493
>gb|CW150626.1|CW150626 104_551_11143509_116_36307_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11143509, DNA
sequence
Length = 452
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 467 ggccggccggccggacgg 484
||||||||||||||||||
Sbjct: 327 ggccggccggccggacgg 344
>gb|CW152306.1|CW152306 104_553_11144420_116_36324_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11144420, DNA
sequence
Length = 723
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 743 gacctccggctcgacatc 760
||||||||||||||||||
Sbjct: 655 gacctccggctcgacatc 638
>gb|CW152307.1|CW152307 104_553_11144420_148_36328_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11144420, DNA
sequence
Length = 678
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 743 gacctccggctcgacatc 760
||||||||||||||||||
Sbjct: 103 gacctccggctcgacatc 120
>gb|CW169535.1|CW169535 104_579_11154725_116_36499_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11154725, DNA
sequence
Length = 648
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 652 gctgccgccacggcggcg 669
||||||||||||||||||
Sbjct: 619 gctgccgccacggcggcg 602
>gb|CW195478.1|CW195478 104_619_11180659_116_36805_078 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180659, DNA
sequence
Length = 614
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 465 gtggccggccggccggac 482
||||||||||||||||||
Sbjct: 204 gtggccggccggccggac 187
>gb|CW202289.1|CW202289 104_628_11185015_116_36934_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11185015, DNA
sequence
Length = 660
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 467 ggccggccggccggacgg 484
||||||||||||||||||
Sbjct: 287 ggccggccggccggacgg 304
>gb|CW224197.1|CW224197 104_660_11203321_116_37197_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11203321, DNA
sequence
Length = 656
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 653 ctgccgccacggcggcgc 670
||||||||||||||||||
Sbjct: 167 ctgccgccacggcggcgc 184
>gb|CW224198.1|CW224198 104_660_11203321_148_37198_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11203321, DNA
sequence
Length = 670
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 653 ctgccgccacggcggcgc 670
||||||||||||||||||
Sbjct: 636 ctgccgccacggcggcgc 619
>gb|CW224980.1|CW224980 104_662_11204108_116_37206_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11204108, DNA
sequence
Length = 670
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 471 ggccggccggacggacgg 488
||||||||||||||||||
Sbjct: 242 ggccggccggacggacgg 225
>gb|CW225040.1|CW225040 104_662_11204138_116_37206_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11204138, DNA
sequence
Length = 669
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 467 ggccggccggccggacgg 484
||||||||||||||||||
Sbjct: 344 ggccggccggccggacgg 361
Score = 36.2 bits (18), Expect = 4.6
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 467 ggccggccggccggacggacgg 488
|||||||||||||| |||||||
Sbjct: 340 ggccggccggccggccggacgg 361
>gb|CW227095.1|CW227095 104_665_11205233_116_37223_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11205233, DNA
sequence
Length = 704
Score = 36.2 bits (18), Expect = 4.6
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 216 ggaagagagagagaaaccgtac 237
|||||||||||||| |||||||
Sbjct: 541 ggaagagagagagacaccgtac 520
>gb|CW227096.1|CW227096 104_665_11205233_148_37224_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11205233, DNA
sequence
Length = 643
Score = 36.2 bits (18), Expect = 4.6
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 216 ggaagagagagagaaaccgtac 237
|||||||||||||| |||||||
Sbjct: 419 ggaagagagagagacaccgtac 440
>gb|CW238390.1|CW238390 104_695_11216705_116_37527_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11216705, DNA
sequence
Length = 772
Score = 36.2 bits (18), Expect = 4.6
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 459 gcgcgcgtggccggccggccgg 480
||||||| ||||||||||||||
Sbjct: 326 gcgcgcgcggccggccggccgg 305
>gb|CW244409.1|CW244409 104_705_11220581_116_37585_025 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11220581, DNA
sequence
Length = 694
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 479 ggacggacggacttgggc 496
||||||||||||||||||
Sbjct: 597 ggacggacggacttgggc 614
>gb|CW245286.1|CW245286 104_706_11220954_148_35077_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11220954, DNA
sequence
Length = 604
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 467 ggccggccggccggacgg 484
||||||||||||||||||
Sbjct: 161 ggccggccggccggacgg 178
>gb|CW245287.1|CW245287 104_706_11220954_148_37599_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11220954, DNA
sequence
Length = 680
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 467 ggccggccggccggacgg 484
||||||||||||||||||
Sbjct: 161 ggccggccggccggacgg 178
>gb|CW255073.1|CW255073 104_719_11226028_116_35125_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11226028, DNA
sequence
Length = 648
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 479 ggacggacggacttgggc 496
||||||||||||||||||
Sbjct: 456 ggacggacggacttgggc 473
>gb|CW258925.1|CW258925 104_725_11228144_116_35185_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11228144, DNA
sequence
Length = 653
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 473 ccggccggacggacggac 490
||||||||||||||||||
Sbjct: 186 ccggccggacggacggac 169
>gb|CW266229.1|CW266229 104_735_11232312_148_35266_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232312, DNA
sequence
Length = 565
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 467 ggccggccggccggacgg 484
||||||||||||||||||
Sbjct: 376 ggccggccggccggacgg 393
>gb|CW271953.1|CW271953 104_744_11403240_116_36224_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403240, DNA
sequence
Length = 722
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 334 cagctgctatatgcatgg 351
||||||||||||||||||
Sbjct: 692 cagctgctatatgcatgg 675
>gb|CW271954.1|CW271954 104_744_11403240_148_36223_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403240, DNA
sequence
Length = 730
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 334 cagctgctatatgcatgg 351
||||||||||||||||||
Sbjct: 666 cagctgctatatgcatgg 683
>gb|CW272031.1|CW272031 104_744_11403272_116_36224_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403272, DNA
sequence
Length = 591
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 465 gtggccggccggccggac 482
||||||||||||||||||
Sbjct: 132 gtggccggccggccggac 115
>gb|CW280145.1|CW280145 104_755_11407461_116_35441_091 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11407461, DNA
sequence
Length = 664
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 467 ggccggccggccggacgg 484
||||||||||||||||||
Sbjct: 149 ggccggccggccggacgg 132
>gb|CW291612.1|CW291612 104_771_11413644_148_35759_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11413644, DNA
sequence
Length = 642
Score = 36.2 bits (18), Expect = 4.6
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 458 ggcgcgcgtggccggccggccg 479
|||||||| |||||||||||||
Sbjct: 122 ggcgcgcgcggccggccggccg 143
>gb|CW292648.1|CW292648 104_772_11414198_116_35580_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11414198, DNA
sequence
Length = 558
Score = 36.2 bits (18), Expect = 4.6
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 632 agcttcgtcgtcgacgcctggc 653
|||| |||||||||||||||||
Sbjct: 31 agctacgtcgtcgacgcctggc 52
>gb|CW294921.1|CW294921 104_776_11460656_148_35615_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11460656, DNA
sequence
Length = 670
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 467 ggccggccggccggacgg 484
||||||||||||||||||
Sbjct: 307 ggccggccggccggacgg 324
Score = 36.2 bits (18), Expect = 4.6
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 467 ggccggccggccggacggacgg 488
|||||||||||||| |||||||
Sbjct: 303 ggccggccggccggccggacgg 324
>gb|CW296125.1|CW296125 104_777_11461326_116_35623_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11461326, DNA
sequence
Length = 644
Score = 36.2 bits (18), Expect = 4.6
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 216 ggaagagagagagaaaccgtac 237
|||||||||||||| |||||||
Sbjct: 32 ggaagagagagagacaccgtac 11
>gb|CW313602.1|CW313602 104_803_11471371_116_35786_066 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11471371, DNA
sequence
Length = 477
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 473 ccggccggacggacggac 490
||||||||||||||||||
Sbjct: 414 ccggccggacggacggac 397
>gb|CW322530.1|CW322530 104_816_11476146_148_35951_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476146, DNA
sequence
Length = 598
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 467 ggccggccggccggacgg 484
||||||||||||||||||
Sbjct: 526 ggccggccggccggacgg 543
>gb|CW323201.1|CW323201 104_817_11476506_116_35962_075 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476506, DNA
sequence
Length = 714
Score = 36.2 bits (18), Expect = 4.6
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 632 agcttcgtcgtcgacgcctggc 653
|||| |||||||||||||||||
Sbjct: 175 agctacgtcgtcgacgcctggc 154
>gb|CW326815.1|CW326815 104_822_11478417_116_35967_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478417, DNA
sequence
Length = 714
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 334 cagctgctatatgcatgg 351
||||||||||||||||||
Sbjct: 713 cagctgctatatgcatgg 696
>gb|CW326816.1|CW326816 104_822_11478417_148_35966_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478417, DNA
sequence
Length = 705
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 334 cagctgctatatgcatgg 351
||||||||||||||||||
Sbjct: 193 cagctgctatatgcatgg 210
>gb|CW330008.1|CW330008 104_826_11480146_116_35998_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480146, DNA
sequence
Length = 643
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 467 ggccggccggccggacgg 484
||||||||||||||||||
Sbjct: 617 ggccggccggccggacgg 634
>gb|CW330009.1|CW330009 104_826_11480146_148_35997_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480146, DNA
sequence
Length = 609
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 467 ggccggccggccggacgg 484
||||||||||||||||||
Sbjct: 162 ggccggccggccggacgg 145
>gb|CW408111.1|CW408111 fsbb001f101n21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f101n21, DNA
sequence
Length = 420
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 629 agcagcttcgtcgtcgac 646
||||||||||||||||||
Sbjct: 322 agcagcttcgtcgtcgac 339
>gb|CW410345.1|CW410345 fsbb001f105a22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f105a22, DNA
sequence
Length = 635
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 467 ggccggccggccggacgg 484
||||||||||||||||||
Sbjct: 154 ggccggccggccggacgg 137
>gb|CW442981.1|CW442981 fsbb001f162n22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f162n22, DNA
sequence
Length = 233
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 467 ggccggccggccggacgg 484
||||||||||||||||||
Sbjct: 120 ggccggccggccggacgg 137
Score = 36.2 bits (18), Expect = 4.6
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 467 ggccggccggccggacggacgg 488
|||||||||||||| |||||||
Sbjct: 116 ggccggccggccggccggacgg 137
>gb|CW465747.1|CW465747 fsbb001f216k11f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f216k11, DNA
sequence
Length = 740
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 467 ggccggccggccggacgg 484
||||||||||||||||||
Sbjct: 274 ggccggccggccggacgg 257
>gb|CW497577.1|CW497577 fsbb001f290g09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f290g09, DNA
sequence
Length = 483
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 463 gcgtggccggccggccgg 480
||||||||||||||||||
Sbjct: 112 gcgtggccggccggccgg 95
>gb|CW500503.1|CW500503 fsbb001f295n17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f295n17, DNA
sequence
Length = 431
Score = 36.2 bits (18), Expect = 4.6
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 459 gcgcgcgtggccggccggccgg 480
||||||| ||||||||||||||
Sbjct: 46 gcgcgcgcggccggccggccgg 25
>gb|CW500994.1|CW500994 fsbb001f296j07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f296j07, DNA
sequence
Length = 496
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 467 ggccggccggccggacgg 484
||||||||||||||||||
Sbjct: 210 ggccggccggccggacgg 227
>gb|CW788524.1|CW788524 SP__Ba0046D20.r SP__Ba Sorghum propinquum genomic clone
SP__Ba0046D20 3', DNA sequence
Length = 643
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 404 gccgtcgtccatggatgg 421
||||||||||||||||||
Sbjct: 94 gccgtcgtccatggatgg 111
>gb|AW678829.1|AW678829 WS1_1_C11.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 534
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 404 gccgtcgtccatggatgg 421
||||||||||||||||||
Sbjct: 323 gccgtcgtccatggatgg 306
>gb|BE600283.1|BE600283 PI1_94_E08.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 475
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 545 atgctggccatgaggtcc 562
||||||||||||||||||
Sbjct: 51 atgctggccatgaggtcc 34
>gb|BG560219.1|BG560219 RHIZ2_71_E10.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 501
Score = 36.2 bits (18), Expect = 4.6
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 648 cctggctgccgccacggcggcg 669
|||||| |||||||||||||||
Sbjct: 164 cctggccgccgccacggcggcg 185
>gb|BG948051.1|BG948051 IP1_8_G04.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 500
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 159 aaatggaaaaggagctaa 176
||||||||||||||||||
Sbjct: 209 aaatggaaaaggagctaa 226
>gb|BI075234.1|BI075234 IP1_17_G01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 574
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 421 gagagagacagcgcgcgc 438
||||||||||||||||||
Sbjct: 36 gagagagacagcgcgcgc 19
>gb|BM324530.1|BM324530 PIC1_32_D04.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 560
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 404 gccgtcgtccatggatgg 421
||||||||||||||||||
Sbjct: 555 gccgtcgtccatggatgg 538
>gb|BM329019.1|BM329019 PIC1_32_D04.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 560
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 404 gccgtcgtccatggatgg 421
||||||||||||||||||
Sbjct: 332 gccgtcgtccatggatgg 315
>gb|CF432970.1|CF432970 NIT1_20_F10.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_20_F10_A002 3', mRNA sequence
Length = 542
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 404 gccgtcgtccatggatgg 421
||||||||||||||||||
Sbjct: 331 gccgtcgtccatggatgg 314
>gb|CF433957.1|CF433957 NIT1_31_A05.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_31_A05_A002 3', mRNA sequence
Length = 628
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 404 gccgtcgtccatggatgg 421
||||||||||||||||||
Sbjct: 417 gccgtcgtccatggatgg 400
>gb|CN126399.1|CN126399 RHOH1_16_H09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_16_H09_A002 5', mRNA sequence
Length = 690
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 743 gacctccggctcgacatc 760
||||||||||||||||||
Sbjct: 158 gacctccggctcgacatc 141
>gb|CN140849.1|CN140849 OX1_47_C03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_47_C03_A002 5', mRNA sequence
Length = 748
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 460 cgcgcgtggccggccggc 477
||||||||||||||||||
Sbjct: 76 cgcgcgtggccggccggc 93
>gb|CN146949.1|CN146949 WOUND1_45_H01.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_45_H01_A002 3', mRNA sequence
Length = 412
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 404 gccgtcgtccatggatgg 421
||||||||||||||||||
Sbjct: 213 gccgtcgtccatggatgg 196
Database: Sorghum_nucl_with_EST.fasta
Posted date: May 2, 2006 3:37 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 362,704
Number of Sequences: 832831
Number of extensions: 362704
Number of successful extensions: 95375
Number of sequences better than 10.0: 192
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94921
Number of HSP's gapped (non-prelim): 445
length of query: 771
length of database: 491,359,669
effective HSP length: 20
effective length of query: 751
effective length of database: 474,703,049
effective search space: 356501989799
effective search space used: 356501989799
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)