BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8612115.2.1
(1078 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW187760.1|CW187760 104_607_11172651_148_36726_012 Sorgh... 604 e-171
gb|CD431467.1|CD431467 ETH1_9_B01.b1_A002 Ethylene-treated ... 604 e-171
gb|CD462378.1|CD462378 ETH1_37_H07.b1_A002 Ethylene-treated... 604 e-171
gb|CN130375.1|CN130375 RHOH1_41_C06.b1_A002 Acid- and alkal... 604 e-171
gb|CN130963.1|CN130963 RHOH1_45_B06.b1_A002 Acid- and alkal... 596 e-168
gb|CX621468.1|CX621468 GABR1_58_G02.b1_A002 GA- or brassino... 580 e-164
gb|CN130449.1|CN130449 RHOH1_41_C06.g1_A002 Acid- and alkal... 485 e-135
gb|CN128505.1|CN128505 RHOH1_30_A09.b1_A002 Acid- and alkal... 439 e-121
gb|CD428294.1|CD428294 ETH1_28_B01.g1_A002 Ethylene-treated... 423 e-116
gb|CD431599.1|CD431599 ETH1_9_B01.g1_A002 Ethylene-treated ... 423 e-116
gb|CD462456.1|CD462456 ETH1_37_H07.g1_A002 Ethylene-treated... 423 e-116
gb|CN128592.1|CN128592 RHOH1_30_A09.g1_A002 Acid- and alkal... 423 e-116
gb|CN131046.1|CN131046 RHOH1_45_B06.g1_A002 Acid- and alkal... 423 e-116
gb|CX621557.1|CX621557 GABR1_58_G02.g1_A002 GA- or brassino... 423 e-116
gb|CW395362.1|CW395362 fsbb001f083f21f0 Sorghum methylation... 147 2e-033
gb|BZ339874.1|BZ339874 ic35d04.g1 WGS-SbicolorF (JM107 adap... 127 2e-027
gb|BZ339873.1|BZ339873 ic35d04.b1 WGS-SbicolorF (JM107 adap... 117 2e-024
gb|CW259260.1|CW259260 104_725_11228327_116_35182_088 Sorgh... 113 3e-023
gb|CW341793.1|CW341793 104_843_11486523_116_36161_010 Sorgh... 113 3e-023
gb|CW341794.1|CW341794 104_843_11486523_148_36162_010 Sorgh... 113 3e-023
gb|CW355490.1|CW355490 fsbb001f020c09f0 Sorghum methylation... 113 3e-023
gb|CW418302.1|CW418302 fsbb001f121l05f0 Sorghum methylation... 113 3e-023
gb|BZ329334.1|BZ329334 hv85c02.g1 WGS-SbicolorF (JM107 adap... 107 2e-021
gb|CL160680.1|CL160680 104_351_10805155_114_31824_211 Sorgh... 107 2e-021
gb|CW053505.1|CW053505 104_293_10516001_115_30191 Sorghum m... 107 2e-021
gb|CW089404.1|CW089404 104_434_10948691_114_32582_036 Sorgh... 107 2e-021
gb|CW160563.1|CW160563 104_567_11149954_116_36419_045 Sorgh... 107 2e-021
gb|CW215614.1|CW215614 104_648_11194634_116_37120_015 Sorgh... 107 2e-021
gb|CN138199.1|CN138199 OX1_62_G05.b1_A002 Oxidatively-stres... 103 3e-020
gb|CN142263.1|CN142263 WOUND1_4_G11.g1_A002 Wounded leaves ... 98 2e-018
gb|AW565780.1|AW565780 LG1_349_C11.g1_A002 Light Grown 1 (L... 96 7e-018
gb|AW678571.1|AW678571 WS1_16_H04.g1_A002 Water-stressed 1 ... 96 7e-018
gb|AW679587.1|AW679587 WS1_2_F10.g1_A002 Water-stressed 1 (... 96 7e-018
gb|AW679710.1|AW679710 WS1_30_B01.g1_A002 Water-stressed 1 ... 96 7e-018
gb|AW680560.1|AW680560 WS1_5_E12.g1_A002 Water-stressed 1 (... 96 7e-018
gb|AW746114.1|AW746114 WS1_39_D12.g1_A002 Water-stressed 1 ... 96 7e-018
gb|AW746359.1|AW746359 WS1_49_B08.g1_A002 Water-stressed 1 ... 96 7e-018
gb|AW747218.1|AW747218 WS1_66_B10.g1_A002 Water-stressed 1 ... 96 7e-018
gb|AW924093.1|AW924093 WS1_49_B08.b1_A002 Water-stressed 1 ... 96 7e-018
gb|AW924646.1|AW924646 WS1_71_G08.b1_A002 Water-stressed 1 ... 96 7e-018
gb|BE355855.1|BE355855 DG1_11_D03.b1_A002 Dark Grown 1 (DG1... 96 7e-018
gb|BE355912.1|BE355912 DG1_11_D03.g1_A002 Dark Grown 1 (DG1... 96 7e-018
gb|BE357093.1|BE357093 DG1_146_F08.g1_A002 Dark Grown 1 (DG... 96 7e-018
gb|BE357351.1|BE357351 DG1_148_C03.g1_A002 Dark Grown 1 (DG... 96 7e-018
gb|BE360701.1|BE360701 DG1_66_D03.b2_A002 Dark Grown 1 (DG1... 96 7e-018
gb|BE361382.1|BE361382 DG1_71_G07.g1_A002 Dark Grown 1 (DG1... 96 7e-018
gb|BE362194.1|BE362194 DG1_85_A01.b1_A002 Dark Grown 1 (DG1... 96 7e-018
gb|BE362271.1|BE362271 DG1_85_A01.g1_A002 Dark Grown 1 (DG1... 96 7e-018
gb|BE363166.1|BE363166 DG1_9_F12.g1_A002 Dark Grown 1 (DG1)... 96 7e-018
gb|BE363774.1|BE363774 WS1_71_A01.g2_A002 Water-stressed 1 ... 96 7e-018
gb|BE364250.1|BE364250 PI1_12_G01.g1_A002 Pathogen induced ... 96 7e-018
gb|BE367502.1|BE367502 PI1_8_B12.g1_A002 Pathogen induced 1... 96 7e-018
gb|BE917655.1|BE917655 OV1_6_D09.g1_A002 Ovary 1 (OV1) Sorg... 96 7e-018
gb|BG239998.1|BG239998 OV1_31_F12.g1_A002 Ovary 1 (OV1) Sor... 96 7e-018
gb|BE364566.2|BE364566 PI1_15_G01.g1_A002 Pathogen induced ... 96 7e-018
gb|BM327889.1|BM327889 PIC1_18_G02.g1_A002 Pathogen-infecte... 96 7e-018
gb|BM328538.1|BM328538 PIC1_30_D09.g1_A002 Pathogen-infecte... 96 7e-018
gb|CD221001.1|CD221001 CCC1_73_H11.b1_A007 Callus culture/c... 96 7e-018
gb|CD221323.1|CD221323 CCC1_54_A02.b1_A007 Callus culture/c... 96 7e-018
gb|CD223304.1|CD223304 CCC1_27_F08.b1_A007 Callus culture/c... 96 7e-018
gb|CD223614.1|CD223614 CCC1_29_B08.b1_A007 Callus culture/c... 96 7e-018
gb|CD224610.1|CD224610 CCC1_35_C01.b1_A007 Callus culture/c... 96 7e-018
gb|CD226353.1|CD226353 CCC1_45_B09.b1_A007 Callus culture/c... 96 7e-018
gb|CD228714.1|CD228714 CCC1_9_C10.b1_A007 Callus culture/ce... 96 7e-018
gb|CD233184.1|CD233184 SS1_12_D02.b1_A012 Salt-stressed see... 96 7e-018
gb|CD423077.1|CD423077 SA1_27_H12.b1_A002 Salicylic acid-tr... 96 7e-018
gb|CD425269.1|CD425269 SA1_11_F10.b1_A002 Salicylic acid-tr... 96 7e-018
gb|CD428006.1|CD428006 ETH1_32_A10.b1_A002 Ethylene-treated... 96 7e-018
gb|CD429182.1|CD429182 ETH1_3_B03.b1_A002 Ethylene-treated ... 96 7e-018
gb|CD429198.1|CD429198 ETH1_3_H07.b1_A002 Ethylene-treated ... 96 7e-018
gb|CD429515.1|CD429515 ETH1_14_F04.b1_A002 Ethylene-treated... 96 7e-018
gb|CD429702.1|CD429702 ETH1_15_E12.b1_A002 Ethylene-treated... 96 7e-018
gb|CD429834.1|CD429834 ETH1_15_E12.g1_A002 Ethylene-treated... 96 7e-018
gb|CD430314.1|CD430314 ETH1_18_H06.b1_A002 Ethylene-treated... 96 7e-018
gb|CD430990.1|CD430990 ETH1_6_G11.b1_A002 Ethylene-treated ... 96 7e-018
gb|CD431008.1|CD431008 ETH1_6_D12.b1_A002 Ethylene-treated ... 96 7e-018
gb|CD431059.1|CD431059 ETH1_6_D12.g1_A002 Ethylene-treated ... 96 7e-018
gb|CD431303.1|CD431303 ETH1_8_H08.b1_A002 Ethylene-treated ... 96 7e-018
gb|CD432159.1|CD432159 ETH1_26_H08.b1_A002 Ethylene-treated... 96 7e-018
gb|CD462773.1|CD462773 ETH1_40_D05.b1_A002 Ethylene-treated... 96 7e-018
gb|CD462776.1|CD462776 ETH1_40_D02.b1_A002 Ethylene-treated... 96 7e-018
gb|CD463716.1|CD463716 ETH1_46_E04.b1_A002 Ethylene-treated... 96 7e-018
gb|CF428897.1|CF428897 PH1_18_B12.b1_A002 Phosphorous-defic... 96 7e-018
gb|CN125257.1|CN125257 RHOH1_10_B09.b1_A002 Acid- and alkal... 96 7e-018
gb|CN125344.1|CN125344 RHOH1_10_B09.g1_A002 Acid- and alkal... 96 7e-018
gb|CN126502.1|CN126502 RHOH1_17_C02.g1_A002 Acid- and alkal... 96 7e-018
gb|CN127000.1|CN127000 RHOH1_20_A08.g1_A002 Acid- and alkal... 96 7e-018
gb|CN127481.1|CN127481 RHOH1_23_F08.b1_A002 Acid- and alkal... 96 7e-018
gb|CN127569.1|CN127569 RHOH1_23_F08.g3_A002 Acid- and alkal... 96 7e-018
gb|CN127659.1|CN127659 RHOH1_24_G05.b1_A002 Acid- and alkal... 96 7e-018
gb|CN127746.1|CN127746 RHOH1_24_G05.g3_A002 Acid- and alkal... 96 7e-018
gb|CN129350.1|CN129350 RHOH1_35_A06.b3_A002 Acid- and alkal... 96 7e-018
gb|CN129401.1|CN129401 RHOH1_35_F01.b3_A002 Acid- and alkal... 96 7e-018
gb|CN129439.1|CN129439 RHOH1_35_A06.g1_A002 Acid- and alkal... 96 7e-018
gb|CN129493.1|CN129493 RHOH1_35_F01.g1_A002 Acid- and alkal... 96 7e-018
gb|CN131895.1|CN131895 OX1_2_H08.g1_A002 Oxidatively-stress... 96 7e-018
gb|CN132371.1|CN132371 OX1_5_F07.g1_A002 Oxidatively-stress... 96 7e-018
gb|CN133096.1|CN133096 OX1_10_D05.b1_A002 Oxidatively-stres... 96 7e-018
gb|CN133177.1|CN133177 OX1_10_D05.g1_A002 Oxidatively-stres... 96 7e-018
gb|CN133289.1|CN133289 OX1_11_G03.b1_A002 Oxidatively-stres... 96 7e-018
gb|CN133309.1|CN133309 OX1_11_H12.b1_A002 Oxidatively-stres... 96 7e-018
gb|CN134855.1|CN134855 OX1_29_A05.b1_A002 Oxidatively-stres... 96 7e-018
gb|CN135528.1|CN135528 OX1_37_H08.b1_A002 Oxidatively-stres... 96 7e-018
gb|CN135607.1|CN135607 OX1_37_H08.g1_A002 Oxidatively-stres... 96 7e-018
gb|CN135776.1|CN135776 OX1_38_H08.g1_A002 Oxidatively-stres... 96 7e-018
gb|CN135781.1|CN135781 OX1_39_A01.b1_A002 Oxidatively-stres... 96 7e-018
gb|CN135863.1|CN135863 OX1_39_A01.g1_A002 Oxidatively-stres... 96 7e-018
gb|CN135913.1|CN135913 OX1_39_E04.g1_A002 Oxidatively-stres... 96 7e-018
gb|CN136017.1|CN136017 OX1_40_G03.b1_A002 Oxidatively-stres... 96 7e-018
gb|CN136030.1|CN136030 OX1_40_H07.b1_A002 Oxidatively-stres... 96 7e-018
gb|CN136103.1|CN136103 OX1_40_G03.g1_A002 Oxidatively-stres... 96 7e-018
gb|CN136117.1|CN136117 OX1_40_H07.g1_A002 Oxidatively-stres... 96 7e-018
gb|CN136961.1|CN136961 OX1_54_H04.b1_A002 Oxidatively-stres... 96 7e-018
gb|CN137048.1|CN137048 OX1_54_H04.g1_A002 Oxidatively-stres... 96 7e-018
gb|CN137902.1|CN137902 OX1_60_A10.g1_A002 Oxidatively-stres... 96 7e-018
gb|CN138975.1|CN138975 OX1_15_F10.b1_A002 Oxidatively-stres... 96 7e-018
gb|CN139066.1|CN139066 OX1_15_F10.g1_A002 Oxidatively-stres... 96 7e-018
gb|CN139450.1|CN139450 OX1_22_D09.b1_A002 Oxidatively-stres... 96 7e-018
gb|CN139535.1|CN139535 OX1_22_D09.g1_A002 Oxidatively-stres... 96 7e-018
gb|CN140227.1|CN140227 OX1_34_H04.g1_A002 Oxidatively-stres... 96 7e-018
gb|CN148827.1|CN148827 WOUND1_59_B10.b1_A002 Wounded leaves... 96 7e-018
gb|CN148901.1|CN148901 WOUND1_59_B10.g1_A002 Wounded leaves... 96 7e-018
gb|CF675622.1|CF675622 CHTN1 Subtractive cDNA library from ... 96 7e-018
gb|CX614686.1|CX614686 GABR1_15_E01.g1_A002 GA- or brassino... 96 7e-018
gb|CX615301.1|CX615301 GABR1_19_G08.b1_A002 GA- or brassino... 96 7e-018
gb|CX618358.1|CX618358 GABR1_39_D04.b1_A002 GA- or brassino... 96 7e-018
gb|CX618438.1|CX618438 GABR1_39_D04.g1_A002 GA- or brassino... 96 7e-018
gb|CN133519.1|CN133519 OX1_12_F02.g1_A002 Oxidatively-stres... 94 3e-017
gb|AW924462.1|AW924462 WS1_69_F11.g1_A002 Water-stressed 1 ... 88 2e-015
gb|BE360975.1|BE360975 DG1_68_D03.g1_A002 Dark Grown 1 (DG1... 88 2e-015
gb|CD429934.1|CD429934 ETH1_16_E07.g1_A002 Ethylene-treated... 88 2e-015
gb|CN133441.1|CN133441 OX1_12_F02.b1_A002 Oxidatively-stres... 88 2e-015
gb|CN135890.1|CN135890 OX1_39_C05.g1_A002 Oxidatively-stres... 88 2e-015
gb|CN137836.1|CN137836 OX1_60_A10.b1_A002 Oxidatively-stres... 88 2e-015
gb|CW242367.1|CW242367 104_702_11219303_148_37560_096 Sorgh... 80 4e-013
gb|BE362064.1|BE362064 DG1_84_G05.b1_A002 Dark Grown 1 (DG1... 80 4e-013
gb|BE362175.1|BE362175 DG1_84_G05.g1_A002 Dark Grown 1 (DG1... 80 4e-013
gb|CN124183.1|CN124183 RHOH1_3_D06.b1_A002 Acid- and alkali... 80 4e-013
gb|CX606404.1|CX606404 ANR1_2_G08.g1_A002 Anaerobic roots S... 80 4e-013
gb|CW089405.1|CW089405 104_434_10948691_115_32586_036 Sorgh... 76 7e-012
gb|CW348368.1|CW348368 fsbb001f008l12f0 Sorghum methylation... 76 7e-012
gb|CD225909.1|CD225909 CCC1_42_G06.b1_A007 Callus culture/c... 76 7e-012
gb|CN132343.1|CN132343 OX1_5_C12.g1_A002 Oxidatively-stress... 76 7e-012
gb|CW040105.1|CW040105 104_273_10505895_114_30263 Sorghum m... 74 3e-011
gb|CD224919.1|CD224919 CCC1_37_F08.b1_A007 Callus culture/c... 74 3e-011
gb|CL197066.1|CL197066 104_423_10943492_114_32326_068 Sorgh... 72 1e-010
gb|CL197573.1|CL197573 104_424_10943830_116_32338_085 Sorgh... 72 1e-010
gb|CW324639.1|CW324639 104_819_11477268_116_35917_044 Sorgh... 72 1e-010
gb|CN133370.1|CN133370 OX1_11_G03.g1_A002 Oxidatively-stres... 72 1e-010
gb|CN135807.1|CN135807 OX1_39_C05.b1_A002 Oxidatively-stres... 72 1e-010
gb|CW121495.1|CW121495 104_499_11109937_148_34657_007 Sorgh... 70 4e-010
gb|BZ412971.1|BZ412971 7b9_ctg2 Subclones from BAC clones m... 68 2e-009
gb|CW348369.1|CW348369 fsbb001f008l12k0 Sorghum methylation... 68 2e-009
gb|CW053651.1|CW053651 104_294_10516083_115_30183 Sorghum m... 66 6e-009
gb|CW063133.1|CW063133 104_308_10521734_1_30092 Sorghum met... 66 6e-009
gb|CW083818.1|CW083818 104_426_10945403_114_32374_044 Sorgh... 66 6e-009
gb|CW083819.1|CW083819 104_426_10945403_116_32438_044 Sorgh... 66 6e-009
gb|CW121494.1|CW121494 104_499_11109937_116_34661_007 Sorgh... 66 6e-009
gb|CW132590.1|CW132590 104_516_11116293_148_34800_095 Sorgh... 66 6e-009
gb|CW185249.1|CW185249 104_602_11165964_148_36691_034 Sorgh... 66 6e-009
gb|AW671689.1|AW671689 LG1_349_C11.b1_A002 Light Grown 1 (L... 66 6e-009
gb|AW747208.1|AW747208 WS1_66_B10.b1_A002 Water-stressed 1 ... 66 6e-009
gb|AW924387.1|AW924387 WS1_69_F11.b1_A002 Water-stressed 1 ... 66 6e-009
gb|AW924632.1|AW924632 WS1_71_A01.b1_A002 Water-stressed 1 ... 66 6e-009
gb|BE367414.1|BE367414 PI1_8_B12.b1_A002 Pathogen induced 1... 66 6e-009
gb|BE595076.1|BE595076 PI1_45_D04.b1_A002 Pathogen induced ... 66 6e-009
gb|BE917732.1|BE917732 OV1_6_D09.b1_A002 Ovary 1 (OV1) Sorg... 66 6e-009
gb|BM323390.1|BM323390 PIC1_18_G02.b1_A002 Pathogen-infecte... 66 6e-009
gb|CD221104.1|CD221104 CCC1_73_H11.g1_A007 Callus culture/c... 66 6e-009
gb|CD221616.1|CD221616 CCC1_55_H11.g1_A007 Callus culture/c... 66 6e-009
gb|CD222063.1|CD222063 CCC1_1_H03.g1_A007 Callus culture/ce... 66 6e-009
gb|CD223414.1|CD223414 CCC1_27_F08.g1_A007 Callus culture/c... 66 6e-009
gb|CD223721.1|CD223721 CCC1_29_B08.g1_A007 Callus culture/c... 66 6e-009
gb|CD224372.1|CD224372 CCC1_33_C12.g1_A007 Callus culture/c... 66 6e-009
gb|CD224700.1|CD224700 CCC1_35_C01.g1_A007 Callus culture/c... 66 6e-009
gb|CD225030.1|CD225030 CCC1_37_F08.g1_A007 Callus culture/c... 66 6e-009
gb|CD226017.1|CD226017 CCC1_42_G06.g1_A007 Callus culture/c... 66 6e-009
gb|CD226448.1|CD226448 CCC1_45_B09.g1_A007 Callus culture/c... 66 6e-009
gb|CD227328.1|CD227328 CCC1_50_D08.g1_A007 Callus culture/c... 66 6e-009
gb|CD227751.1|CD227751 CCC1_53_B12.g1_A007 Callus culture/c... 66 6e-009
gb|CD228084.1|CD228084 CCC1_5_H07.g1_A007 Callus culture/ce... 66 6e-009
gb|CD228728.1|CD228728 CCC1_9_C10.g1_A007 Callus culture/ce... 66 6e-009
gb|CD228902.1|CD228902 CCC1_10_F09.g1_A007 Callus culture/c... 66 6e-009
gb|CD229725.1|CD229725 CCC1_18_D07.g1_A007 Callus culture/c... 66 6e-009
gb|CD233204.1|CD233204 SS1_12_D02.g1_A012 Salt-stressed see... 66 6e-009
gb|CD425362.1|CD425362 SA1_11_F10.g1_A002 Salicylic acid-tr... 66 6e-009
gb|CD429650.1|CD429650 ETH1_14_F04.g1_A002 Ethylene-treated... 66 6e-009
gb|CD431041.1|CD431041 ETH1_6_G11.g1_A002 Ethylene-treated ... 66 6e-009
gb|CD431432.1|CD431432 ETH1_8_H08.g1_A002 Ethylene-treated ... 66 6e-009
gb|CD431872.1|CD431872 ETH1_11_A09.g1_A002 Ethylene-treated... 66 6e-009
gb|CD432083.1|CD432083 ETH1_12_E10.g1_A002 Ethylene-treated... 66 6e-009
gb|CD432174.1|CD432174 ETH1_26_H08.g1_A002 Ethylene-treated... 66 6e-009
gb|CD462430.1|CD462430 ETH1_37_A03.g1_A002 Ethylene-treated... 66 6e-009
gb|CD463808.1|CD463808 ETH1_46_E04.g1_A002 Ethylene-treated... 66 6e-009
gb|CN132318.1|CN132318 OX1_5_A08.g1_A002 Oxidatively-stress... 66 6e-009
gb|CN133388.1|CN133388 OX1_11_H12.g1_A002 Oxidatively-stres... 66 6e-009
gb|CN133532.1|CN133532 OX1_12_G04.g1_A002 Oxidatively-stres... 66 6e-009
gb|CN134924.1|CN134924 OX1_29_A05.g1_A002 Oxidatively-stres... 66 6e-009
gb|CN135288.1|CN135288 OX1_31_F11.g1_A002 Oxidatively-stres... 66 6e-009
gb|CN140761.1|CN140761 OX1_46_G11.g1_A002 Oxidatively-stres... 66 6e-009
gb|CN141022.1|CN141022 OX1_48_G11.g1_A002 Oxidatively-stres... 66 6e-009
gb|CX615384.1|CX615384 GABR1_19_G08.g1_A002 GA- or brassino... 66 6e-009
gb|CW160564.1|CW160564 104_567_11149954_148_36420_045 Sorgh... 64 3e-008
gb|CW395363.1|CW395363 fsbb001f083f21k0 Sorghum methylation... 64 3e-008
gb|CF433411.1|CF433411 NIT1_26_B11.g1_A002 Nitrogen-deficie... 64 3e-008
gb|CN124256.1|CN124256 RHOH1_3_D06.g1_A002 Acid- and alkali... 64 3e-008
gb|CN132265.1|CN132265 OX1_5_C12.b1_A002 Oxidatively-stress... 62 1e-007
gb|BZ329333.1|BZ329333 hv85c02.b1 WGS-SbicolorF (JM107 adap... 60 4e-007
gb|CW215615.1|CW215615 104_648_11194634_148_37119_015 Sorgh... 60 4e-007
gb|CW230654.1|CW230654 104_679_11210687_116_37331_088 Sorgh... 58 2e-006
gb|AW680495.1|AW680495 WS1_5_E12.b1_A002 Water-stressed 1 (... 58 2e-006
gb|AW924486.1|AW924486 WS1_69_A11.g1_A002 Water-stressed 1 ... 56 6e-006
gb|BF705196.1|BF705196 RHIZ2_2_G06.g1_A003 Rhizome2 (RHIZ2)... 56 6e-006
gb|BG159392.1|BG159392 OV2_7_C07.g1_A002 Ovary 2 (OV2) Sorg... 56 6e-006
gb|CF771645.1|CF771645 DSBF1_22_C05.g1_A010 Drought-stresse... 56 6e-006
gb|CN126421.1|CN126421 RHOH1_17_C02.b1_A002 Acid- and alkal... 56 6e-006
gb|CN133451.1|CN133451 OX1_12_G04.b1_A002 Oxidatively-stres... 56 6e-006
gb|CN142180.1|CN142180 WOUND1_4_G11.b1_A002 Wounded leaves ... 56 6e-006
gb|CW132589.1|CW132589 104_516_11116293_116_34804_095 Sorgh... 54 3e-005
gb|CW355491.1|CW355491 fsbb001f020c09k0 Sorghum methylation... 54 3e-005
gb|CW448817.1|CW448817 fsbb001f182j24f0 Sorghum methylation... 54 3e-005
gb|CW044075.1|CW044075 104_279_10508747_114_30275 Sorghum m... 52 1e-004
gb|CW182959.1|CW182959 104_598_11164358_148_36669_053 Sorgh... 52 1e-004
gb|AW924431.1|AW924431 WS1_69_A11.b1_A002 Water-stressed 1 ... 52 1e-004
gb|CN132290.1|CN132290 OX1_5_F07.b1_A002 Oxidatively-stress... 52 1e-004
gb|CW262928.1|CW262928 104_730_11230352_116_35227_020 Sorgh... 48 0.002
gb|CW262929.1|CW262929 104_730_11230352_148_35222_020 Sorgh... 48 0.002
gb|CW266690.1|CW266690 104_736_11232572_148_35288_072 Sorgh... 48 0.002
gb|CW274151.1|CW274151 104_747_11404275_116_35374_016 Sorgh... 48 0.002
gb|CW296573.1|CW296573 104_778_11461580_116_35631_074 Sorgh... 48 0.002
gb|CW319821.1|CW319821 104_812_11474686_148_35893_087 Sorgh... 48 0.002
gb|CW390341.1|CW390341 fsbb001f075p08k0 Sorghum methylation... 48 0.002
gb|AW286999.2|AW286999 LG1_264_C01.b1_A002 Light Grown 1 (L... 48 0.002
gb|AW678458.1|AW678458 WS1_16_B03.b1_A002 Water-stressed 1 ... 48 0.002
gb|AW746066.1|AW746066 WS1_39_D12.b1_A002 Water-stressed 1 ... 48 0.002
gb|BE125026.1|BE125026 DG1_14_C01.b1_A002 Dark Grown 1 (DG1... 48 0.002
gb|BE125237.1|BE125237 DG1_16_A04.b1_A002 Dark Grown 1 (DG1... 48 0.002
gb|BE357044.1|BE357044 DG1_146_F08.b1_A002 Dark Grown 1 (DG... 48 0.002
gb|BE357291.1|BE357291 DG1_148_C03.b1_A002 Dark Grown 1 (DG... 48 0.002
gb|BE361334.1|BE361334 DG1_71_G07.b1_A002 Dark Grown 1 (DG1... 48 0.002
gb|BE363083.1|BE363083 DG1_9_F12.b1_A002 Dark Grown 1 (DG1)... 48 0.002
gb|BE364175.1|BE364175 PI1_12_G01.b1_A002 Pathogen induced ... 48 0.002
gb|BE599969.1|BE599969 PI1_77_H08.b1_A002 Pathogen induced ... 48 0.002
gb|BF705262.1|BF705262 RHIZ2_2_G06.b1_A003 Rhizome2 (RHIZ2)... 48 0.002
gb|BG159645.1|BG159645 OV2_7_C07.b1_A002 Ovary 2 (OV2) Sorg... 48 0.002
gb|BG240584.1|BG240584 OV1_31_F12.b1_A002 Ovary 1 (OV1) Sor... 48 0.002
gb|BG933458.1|BG933458 WS1_2_F10.b1_A002 Water-stressed 1 (... 48 0.002
gb|BM318621.1|BM318621 PI1_15_G01.b9_A002 Pathogen induced ... 48 0.002
gb|BM324026.1|BM324026 PIC1_30_D09.b1_A002 Pathogen-infecte... 48 0.002
gb|CD221788.1|CD221788 CCC1_70_A07.g1_A007 Callus culture/c... 48 0.002
gb|CD429142.1|CD429142 ETH1_2_G02.g1_A002 Ethylene-treated ... 48 0.002
gb|CD429313.1|CD429313 ETH1_3_B03.g1_A002 Ethylene-treated ... 48 0.002
gb|CD429337.1|CD429337 ETH1_3_H07.g1_A002 Ethylene-treated ... 48 0.002
gb|CD430443.1|CD430443 ETH1_18_H06.g1_A002 Ethylene-treated... 48 0.002
gb|CD462713.1|CD462713 ETH1_39_H12.g1_A002 Ethylene-treated... 48 0.002
gb|CD462873.1|CD462873 ETH1_40_D02.g2_A002 Ethylene-treated... 48 0.002
gb|CD463439.1|CD463439 ETH1_44_H05.g1_A002 Ethylene-treated... 48 0.002
gb|CF427393.1|CF427393 PH1_1_D04.b1_A002 Phosphorous-defici... 48 0.002
gb|CF427422.1|CF427422 PH1_1_D04.g1_A002 Phosphorous-defici... 48 0.002
gb|CW239936.1|CW239936 104_698_11217930_148_37424_073 Sorgh... 44 0.025
gb|CW445183.1|CW445183 fsbb001f170c18f0 Sorghum methylation... 44 0.025
gb|CN138276.1|CN138276 OX1_62_G05.g1_A002 Oxidatively-stres... 44 0.025
gb|CC059927.1|CC059927 ii39c08.b1 WGS-SbicolorF (DH5a methy... 40 0.39
gb|CW141511.1|CW141511 104_532_11136351_116_34932_056 Sorgh... 40 0.39
gb|CW141512.1|CW141512 104_532_11136351_148_34928_056 Sorgh... 40 0.39
gb|CW181343.1|CW181343 104_596_11163456_148_36653_092 Sorgh... 40 0.39
gb|CW262757.1|CW262757 104_730_11230256_116_35227_024 Sorgh... 40 0.39
gb|CW262758.1|CW262758 104_730_11230256_148_35222_024 Sorgh... 40 0.39
gb|CW297781.1|CW297781 104_780_11462223_148_35650_062 Sorgh... 40 0.39
gb|CW333427.1|CW333427 104_831_11481936_116_36045_090 Sorgh... 40 0.39
gb|CW333428.1|CW333428 104_831_11481936_148_36046_090 Sorgh... 40 0.39
gb|CW364984.1|CW364984 fsbb001f037e17f0 Sorghum methylation... 40 0.39
gb|CW365427.1|CW365427 fsbb001f037p10k0 Sorghum methylation... 40 0.39
gb|CW428272.1|CW428272 fsbb001f140m09f0 Sorghum methylation... 40 0.39
gb|CW471938.1|CW471938 fsbb001f226d18f0 Sorghum methylation... 40 0.39
gb|AW671693.1|AW671693 LG1_349_C07.b1_A002 Light Grown 1 (L... 40 0.39
gb|BE357917.1|BE357917 DG1_23_F07.b1_A002 Dark Grown 1 (DG1... 40 0.39
gb|BE357989.1|BE357989 DG1_23_F07.g1_A002 Dark Grown 1 (DG1... 40 0.39
gb|CD204090.1|CD204090 HS1_3_H06.g1_A012 Heat-shocked seedl... 40 0.39
gb|CD204549.1|CD204549 HS1_8_C12.g1_A012 Heat-shocked seedl... 40 0.39
gb|CD219934.1|CD219934 CCC1_59_D08.g1_A007 Callus culture/c... 40 0.39
gb|CD220199.1|CD220199 CCC1_65_F07.g1_A007 Callus culture/c... 40 0.39
gb|CD220324.1|CD220324 CCC1_66_G10.g1_A007 Callus culture/c... 40 0.39
gb|CD220343.1|CD220343 CCC1_66_C09.g1_A007 Callus culture/c... 40 0.39
gb|CD220364.1|CD220364 CCC1_66_G01.g1_A007 Callus culture/c... 40 0.39
gb|CD220372.1|CD220372 CCC1_66_D02.g1_A007 Callus culture/c... 40 0.39
gb|CD220511.1|CD220511 CCC1_67_C09.g1_A007 Callus culture/c... 40 0.39
gb|CD221086.1|CD221086 CCC1_73_C11.g1_A007 Callus culture/c... 40 0.39
gb|CD221130.1|CD221130 CCC1_73_E01.g1_A007 Callus culture/c... 40 0.39
gb|CD221239.1|CD221239 CCC1_74_C01.g1_A007 Callus culture/c... 40 0.39
gb|CD221272.1|CD221272 CCC1_74_G01.g1_A007 Callus culture/c... 40 0.39
gb|CD221312.1|CD221312 CCC1_74_D01.g1_A007 Callus culture/c... 40 0.39
gb|CD222010.1|CD222010 CCC1_1_E06.g1_A007 Callus culture/ce... 40 0.39
gb|CD222048.1|CD222048 CCC1_1_D08.g1_A007 Callus culture/ce... 40 0.39
gb|CD222207.1|CD222207 CCC1_2_B04.g1_A007 Callus culture/ce... 40 0.39
gb|CD222232.1|CD222232 CCC1_2_B06.g1_A007 Callus culture/ce... 40 0.39
gb|CD222263.1|CD222263 CCC1_2_F11.g1_A007 Callus culture/ce... 40 0.39
gb|CD222571.1|CD222571 CCC1_22_F08.g1_A007 Callus culture/c... 40 0.39
gb|CD222688.1|CD222688 CCC1_23_F04.g1_A007 Callus culture/c... 40 0.39
gb|CD222875.1|CD222875 CCC1_24_E09.g1_A007 Callus culture/c... 40 0.39
gb|CD222898.1|CD222898 CCC1_24_D03.g1_A007 Callus culture/c... 40 0.39
gb|CD223221.1|CD223221 CCC1_26_C12.g1_A007 Callus culture/c... 40 0.39
gb|CD223506.1|CD223506 CCC1_28_B04.g1_A007 Callus culture/c... 40 0.39
gb|CD223558.1|CD223558 CCC1_28_B05.g1_A007 Callus culture/c... 40 0.39
gb|CD223840.1|CD223840 CCC1_30_H08.g1_A007 Callus culture/c... 40 0.39
gb|CD223892.1|CD223892 CCC1_30_E02.g1_A007 Callus culture/c... 40 0.39
gb|CD224847.1|CD224847 CCC1_36_A10.g1_A007 Callus culture/c... 40 0.39
gb|CD224863.1|CD224863 CCC1_36_D06.g1_A007 Callus culture/c... 40 0.39
gb|CD224980.1|CD224980 CCC1_37_A09.g1_A007 Callus culture/c... 40 0.39
gb|CD225152.1|CD225152 CCC1_38_D02.g1_A007 Callus culture/c... 40 0.39
gb|CD225201.1|CD225201 CCC1_38_D03.g1_A007 Callus culture/c... 40 0.39
gb|CD225461.1|CD225461 CCC1_3_C04.g1_A007 Callus culture/ce... 40 0.39
gb|CD225969.1|CD225969 CCC1_42_H12.g1_A007 Callus culture/c... 40 0.39
gb|CD226001.1|CD226001 CCC1_42_H06.g1_A007 Callus culture/c... 40 0.39
gb|CD226131.1|CD226131 CCC1_43_B09.g1_A007 Callus culture/c... 40 0.39
gb|CD226257.1|CD226257 CCC1_44_E06.g1_A007 Callus culture/c... 40 0.39
gb|CD226726.1|CD226726 CCC1_47_B02.g1_A007 Callus culture/c... 40 0.39
gb|CD226731.1|CD226731 CCC1_47_C07.g1_A007 Callus culture/c... 40 0.39
gb|CD226980.1|CD226980 CCC1_49_G04.g1_A007 Callus culture/c... 40 0.39
gb|CD227044.1|CD227044 CCC1_49_C09.g1_A007 Callus culture/c... 40 0.39
gb|CD227140.1|CD227140 CCC1_4_F11.g1_A007 Callus culture/ce... 40 0.39
gb|CD227175.1|CD227175 CCC1_4_A12.g1_A007 Callus culture/ce... 40 0.39
gb|CD227454.1|CD227454 CCC1_51_D06.g1_A007 Callus culture/c... 40 0.39
gb|CD227764.1|CD227764 CCC1_53_B01.g1_A007 Callus culture/c... 40 0.39
gb|CD228065.1|CD228065 CCC1_5_H02.g1_A007 Callus culture/ce... 40 0.39
gb|CD228085.1|CD228085 CCC1_5_F10.g1_A007 Callus culture/ce... 40 0.39
gb|CD228103.1|CD228103 CCC1_5_B09.g1_A007 Callus culture/ce... 40 0.39
gb|CD228926.1|CD228926 CCC1_10_D09.g1_A007 Callus culture/c... 40 0.39
gb|CD229193.1|CD229193 CCC1_13_E12.g1_A007 Callus culture/c... 40 0.39
gb|CD229547.1|CD229547 CCC1_16_D12.g1_A007 Callus culture/c... 40 0.39
gb|CD229568.1|CD229568 CCC1_16_E06.g1_A007 Callus culture/c... 40 0.39
gb|CD229857.1|CD229857 CCC1_20_F11.g1_A007 Callus culture/c... 40 0.39
gb|CD229888.1|CD229888 CCC1_20_F05.g1_A007 Callus culture/c... 40 0.39
gb|CD429448.1|CD429448 ETH1_4_F11.g1_A002 Ethylene-treated ... 40 0.39
gb|CD430089.1|CD430089 ETH1_13_A06.g1_A002 Ethylene-treated... 40 0.39
gb|CD430407.1|CD430407 ETH1_18_C06.g1_A002 Ethylene-treated... 40 0.39
gb|CD431380.1|CD431380 ETH1_8_A05.g1_A002 Ethylene-treated ... 40 0.39
gb|CD462358.1|CD462358 ETH1_37_E11.b1_A002 Ethylene-treated... 40 0.39
gb|CD462482.1|CD462482 ETH1_37_E11.g1_A002 Ethylene-treated... 40 0.39
gb|CD463165.1|CD463165 ETH1_42_B04.g1_A002 Ethylene-treated... 40 0.39
gb|CD463781.1|CD463781 ETH1_46_F06.g1_A002 Ethylene-treated... 40 0.39
gb|CN128006.1|CN128006 RHOH1_26_H12.b1_A002 Acid- and alkal... 40 0.39
gb|CN128087.1|CN128087 RHOH1_26_H12.g1_A002 Acid- and alkal... 40 0.39
gb|CN131064.1|CN131064 RHOH1_45_D07.g1_A002 Acid- and alkal... 40 0.39
gb|CN131278.1|CN131278 RHOH1_47_A05.b1_A002 Acid- and alkal... 40 0.39
gb|CN132205.1|CN132205 OX1_4_E08.g1_A002 Oxidatively-stress... 40 0.39
gb|CN140149.1|CN140149 OX1_34_H04.b1_A002 Oxidatively-stres... 40 0.39
gb|CN147584.1|CN147584 WOUND1_50_E02.g1_A002 Wounded leaves... 40 0.39
gb|CX606737.1|CX606737 ANR1_4_E06.g1_A002 Anaerobic roots S... 40 0.39
gb|CX611691.1|CX611691 ANR1_26_D08.b1_A002 Anaerobic roots ... 40 0.39
gb|CX611775.1|CX611775 ANR1_26_D08.g1_A002 Anaerobic roots ... 40 0.39
gb|CX612999.1|CX612999 GABR1_5_D12.g1_A002 GA- or brassinol... 40 0.39
gb|CX622854.1|CX622854 GABR1_66_H03.b1_A002 GA- or brassino... 40 0.39
gb|CX622947.1|CX622947 GABR1_66_H03.g1_A002 GA- or brassino... 40 0.39
>gb|CW187760.1|CW187760 104_607_11172651_148_36726_012 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11172651, DNA
sequence
Length = 554
Score = 604 bits (304), Expect = e-171
Identities = 374/395 (94%), Gaps = 3/395 (0%)
Strand = Plus / Minus
Query: 522 ccgctgcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggc 581
|||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 524 ccgcggcgccgcagtgcccgttcccggacgcgtcgctgggcacggcgctcggcacggggc 465
Query: 582 tgttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagtacagcgcgagcg 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tgttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagtacagcgcgagcg 405
Query: 642 ccggcgtgggcagcctggcgaaagcgtgggcgcagtggacgtccatcagggcggggcggg 701
||||||||||| ||||||||| |||||||||||||||||| |||||||||| || ||||
Sbjct: 404 ccggcgtgggcggcctggcgagcgcgtgggcgcagtggacgcccatcagggccggccggg 345
Query: 702 tgttcctcggcctccccgccgcgccccaggccgctggcagcgggttcgtgccggcgagcg 761
|||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 344 tgttcctcggcctcccggccgcgccacaggccgcgggcagcgggttcgtgccggcgagcg 285
Query: 762 acctcgtggcgcaggtgctgccggtggtcaagaactccaccaagtacgggggcatcatgc 821
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 284 acctcgtggcgcaggtgctgccggtggtcaagaactccaccaagtacgggggaatcatgc 225
Query: 822 tctggtccaggtactacgacgggctcacggggtacagcgacgcggtcaagtcctacgtgt 881
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 224 tctggtccaggtactacgacgggctcacggggtacagcgacgcggtcaagtcccaagtgt 165
Query: 882 gag-ctagccag--cctcgtgtcatgtcgggcgtg 913
||| || ||| |||||||||||||||||||||
Sbjct: 164 gagagcaggcaggccctcgtgtcatgtcgggcgtg 130
>gb|CD431467.1|CD431467 ETH1_9_B01.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_9_B01_A002 3', mRNA sequence
Length = 606
Score = 604 bits (304), Expect = e-171
Identities = 374/395 (94%), Gaps = 3/395 (0%)
Strand = Plus / Plus
Query: 522 ccgctgcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggc 581
|||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 48 ccgcggcgccgcagtgcccgttcccggacgcgtcgctgggcacggcgctcggcacggggc 107
Query: 582 tgttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagtacagcgcgagcg 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 tgttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagtacagcgcgagcg 167
Query: 642 ccggcgtgggcagcctggcgaaagcgtgggcgcagtggacgtccatcagggcggggcggg 701
||||||||||| ||||||||| |||||||||||||||||| |||||||||| || ||||
Sbjct: 168 ccggcgtgggcggcctggcgagcgcgtgggcgcagtggacgcccatcagggccggccggg 227
Query: 702 tgttcctcggcctccccgccgcgccccaggccgctggcagcgggttcgtgccggcgagcg 761
|||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 228 tgttcctcggcctcccggccgcgccacaggccgcgggcagcgggttcgtgccggcgagcg 287
Query: 762 acctcgtggcgcaggtgctgccggtggtcaagaactccaccaagtacgggggcatcatgc 821
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 288 acctcgtggcgcaggtgctgccggtggtcaagaactccaccaagtacgggggaatcatgc 347
Query: 822 tctggtccaggtactacgacgggctcacggggtacagcgacgcggtcaagtcctacgtgt 881
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 348 tctggtccaggtactacgacgggctcacggggtacagcgacgcggtcaagtcccaagtgt 407
Query: 882 gag-ctagccag--cctcgtgtcatgtcgggcgtg 913
||| || ||| |||||||||||||||||||||
Sbjct: 408 gagagcaggcaggccctcgtgtcatgtcgggcgtg 442
>gb|CD462378.1|CD462378 ETH1_37_H07.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_37_H07_A002 3', mRNA sequence
Length = 623
Score = 604 bits (304), Expect = e-171
Identities = 374/395 (94%), Gaps = 3/395 (0%)
Strand = Plus / Plus
Query: 522 ccgctgcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggc 581
|||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 151 ccgcggcgccgcagtgcccgttcccggacgcgtcgctgggcacggcgctcggcacggggc 210
Query: 582 tgttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagtacagcgcgagcg 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 tgttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagtacagcgcgagcg 270
Query: 642 ccggcgtgggcagcctggcgaaagcgtgggcgcagtggacgtccatcagggcggggcggg 701
||||||||||| ||||||||| |||||||||||||||||| |||||||||| || ||||
Sbjct: 271 ccggcgtgggcggcctggcgagcgcgtgggcgcagtggacgcccatcagggccggccggg 330
Query: 702 tgttcctcggcctccccgccgcgccccaggccgctggcagcgggttcgtgccggcgagcg 761
|||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 331 tgttcctcggcctcccggccgcgccacaggccgcgggcagcgggttcgtgccggcgagcg 390
Query: 762 acctcgtggcgcaggtgctgccggtggtcaagaactccaccaagtacgggggcatcatgc 821
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 391 acctcgtggcgcaggtgctgccggtggtcaagaactccaccaagtacgggggaatcatgc 450
Query: 822 tctggtccaggtactacgacgggctcacggggtacagcgacgcggtcaagtcctacgtgt 881
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 451 tctggtccaggtactacgacgggctcacggggtacagcgacgcggtcaagtcccaagtgt 510
Query: 882 gag-ctagccag--cctcgtgtcatgtcgggcgtg 913
||| || ||| |||||||||||||||||||||
Sbjct: 511 gagagcaggcaggccctcgtgtcatgtcgggcgtg 545
Score = 173 bits (87), Expect = 3e-041
Identities = 103/107 (96%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 380 tccaggcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgagagcggcgg 439
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 21 tccaggccc-ctcggcgacgccgtcctcgacggcatcgacttcgacatcgagagcggcgg 79
Query: 440 gggcatgtactgggacgacctggcccggttcctcaagtcctactccc 486
| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 80 gagcatgtactgggacgacctggccaggttcctcaagtcctactccc 126
>gb|CN130375.1|CN130375 RHOH1_41_C06.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_41_C06_A002 3', mRNA sequence
Length = 804
Score = 604 bits (304), Expect = e-171
Identities = 374/395 (94%), Gaps = 3/395 (0%)
Strand = Plus / Plus
Query: 522 ccgctgcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggc 581
|||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 328 ccgcggcgccgcagtgcccgttcccggacgcgtcgctgggcacggcgctcggcacggggc 387
Query: 582 tgttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagtacagcgcgagcg 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tgttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagtacagcgcgagcg 447
Query: 642 ccggcgtgggcagcctggcgaaagcgtgggcgcagtggacgtccatcagggcggggcggg 701
||||||||||| ||||||||| |||||||||||||||||| |||||||||| || ||||
Sbjct: 448 ccggcgtgggcggcctggcgagcgcgtgggcgcagtggacgcccatcagggccggccggg 507
Query: 702 tgttcctcggcctccccgccgcgccccaggccgctggcagcgggttcgtgccggcgagcg 761
|||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 508 tgttcctcggcctcccggccgcgccacaggccgcgggcagcgggttcgtgccggcgagcg 567
Query: 762 acctcgtggcgcaggtgctgccggtggtcaagaactccaccaagtacgggggcatcatgc 821
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 568 acctcgtggcgcaggtgctgccggtggtcaagaactccaccaagtacgggggaatcatgc 627
Query: 822 tctggtccaggtactacgacgggctcacggggtacagcgacgcggtcaagtcctacgtgt 881
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 628 tctggtccaggtactacgacgggctcacggggtacagcgacgcggtcaagtcccaagtgt 687
Query: 882 gag-ctagccag--cctcgtgtcatgtcgggcgtg 913
||| || ||| |||||||||||||||||||||
Sbjct: 688 gagagcaggcaggccctcgtgtcatgtcgggcgtg 722
Score = 227 bits (114), Expect = 2e-057
Identities = 164/181 (90%)
Strand = Plus / Plus
Query: 165 acctggcgggccactgcgacccagcgagcggcgggtgcacgggcgtgggcgcggacgtca 224
||||||| ||||| |||||||| |||||| ||||||||||||||||||||||||| |||
Sbjct: 1 acctggccggccantgcgacccggcgagcaacgggtgcacgggcgtgggcgcggacatca 60
Query: 225 aggcgtgccagcgcatgggcgtcaaggtcctgctctccatcggcgggggcgtcggcagct 284
||||||||||| |||||| ||||||||||||||||||||||||| || ||||||||||
Sbjct: 61 ttgcgtgccagcggatgggcatcaaggtcctgctctccatcggcggcggagtcggcagct 120
Query: 285 acgggctctcgtcccgggccgacgcccggagcgtcgcggcgtacctctgggacaactacc 344
|||||||||||||||||| |||||| ||| ||||||||||||||||||| |||||||||
Sbjct: 121 acgggctctcgtcccgggacgacgcgaggaccgtcgcggcgtacctctggaacaactacc 180
Query: 345 t 345
|
Sbjct: 181 t 181
Score = 173 bits (87), Expect = 3e-041
Identities = 103/107 (96%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 380 tccaggcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgagagcggcgg 439
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 198 tccaggccc-ctcggcgacgccgtcctcgacggcatcgacttcgacatcgagagcggcgg 256
Query: 440 gggcatgtactgggacgacctggcccggttcctcaagtcctactccc 486
| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 257 gagcatgtactgggacgacctggccaggttcctcaagtcctactccc 303
>gb|CN130963.1|CN130963 RHOH1_45_B06.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_45_B06_A002 3', mRNA sequence
Length = 753
Score = 596 bits (300), Expect = e-168
Identities = 373/395 (94%), Gaps = 3/395 (0%)
Strand = Plus / Plus
Query: 522 ccgctgcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggc 581
|||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 222 ccgcggcgccgcagtgcccgttcccggacgcgtcgctgggcacggcgctcggcacggggc 281
Query: 582 tgttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagtacagcgcgagcg 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tgttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagtacagcgcgagcg 341
Query: 642 ccggcgtgggcagcctggcgaaagcgtgggcgcagtggacgtccatcagggcggggcggg 701
||||||||||| |||||||| |||||||||||||||||| |||||||||| || ||||
Sbjct: 342 ccggcgtgggcggcctggcgggcgcgtgggcgcagtggacgcccatcagggccggccggg 401
Query: 702 tgttcctcggcctccccgccgcgccccaggccgctggcagcgggttcgtgccggcgagcg 761
|||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 402 tgttcctcggcctcccggccgcgccacaggccgcgggcagcgggttcgtgccggcgagcg 461
Query: 762 acctcgtggcgcaggtgctgccggtggtcaagaactccaccaagtacgggggcatcatgc 821
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 462 acctcgtggcgcaggtgctgccggtggtcaagaactccaccaagtacgggggaatcatgc 521
Query: 822 tctggtccaggtactacgacgggctcacggggtacagcgacgcggtcaagtcctacgtgt 881
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 522 tctggtccaggtactacgacgggctcacggggtacagcgacgcggtcaagtcccaagtgt 581
Query: 882 gag-ctagccag--cctcgtgtcatgtcgggcgtg 913
||| || ||| |||||||||||||||||||||
Sbjct: 582 gagagcaggcaggccctcgtgtcatgtcgggcgtg 616
Score = 173 bits (87), Expect = 3e-041
Identities = 103/107 (96%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 380 tccaggcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgagagcggcgg 439
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 92 tccaggccc-ctcggcgacgccgtcctcgacggcatcgacttcgacatcgagagcggcgg 150
Query: 440 gggcatgtactgggacgacctggcccggttcctcaagtcctactccc 486
| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 151 gagcatgtactgggacgacctggccaggttcctcaagtcctactccc 197
Score = 101 bits (51), Expect = 1e-019
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 275 gtcggcagctacgggctctcgtcccgggccgacgcccggagcgtcgcggcgtacctctgg 334
|||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||
Sbjct: 5 gtcggcagctacgggctctcgtcccgggacgacgcgaggaccgtcgcggcgtacctctgg 64
Query: 335 gacaactacct 345
||||||||||
Sbjct: 65 aacaactacct 75
>gb|CX621468.1|CX621468 GABR1_58_G02.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_58_G02_A002 3', mRNA sequence
Length = 588
Score = 580 bits (292), Expect = e-164
Identities = 371/395 (93%), Gaps = 3/395 (0%)
Strand = Plus / Plus
Query: 522 ccgctgcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggc 581
|||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 29 ccgcggcgccgcagtgcccgttcccggacgcgtcgctgggcacggcgctcggcacggggc 88
Query: 582 tgttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagtacagcgcgagcg 641
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 89 tgttcgactacgtgtgggtgcagttttacaacaacccgccgtgccagtacagcgcgagcg 148
Query: 642 ccggcgtgggcagcctggcgaaagcgtgggcgcagtggacgtccatcagggcggggcggg 701
||||||||||| ||||||||| |||||||||||||||||| |||||||||| || ||||
Sbjct: 149 ccggcgtgggcggcctggcgagcgcgtgggcgcagtggacgcccatcagggccggccggg 208
Query: 702 tgttcctcggcctccccgccgcgccccaggccgctggcagcgggttcgtgccggcgagcg 761
||||||||||||| || |||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 209 tgttcctcggccttccggccgcgccacaggccgcgggcagcgggttcgtgccggcgagcg 268
Query: 762 acctcgtggcgcaggtgctgccggtggtcaagaactccaccaagtacgggggcatcatgc 821
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 269 acctcgtggcgcaggtgctgccggtggtcaagaactccaccaagtacgggggaatcatgc 328
Query: 822 tctggtccaggtactacgacgggctcacggggtacagcgacgcggtcaagtcctacgtgt 881
||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||
Sbjct: 329 tctggtccaggtactacgacgggctcacggggtacagcggcgcggtcaagtcccaagtgt 388
Query: 882 gag-ctagccag--cctcgtgtcatgtcgggcgtg 913
||| || ||| |||||||||||||||||||||
Sbjct: 389 gagagcaggcaggccctcgtgtcatgtcgggcgtg 423
>gb|CN130449.1|CN130449 RHOH1_41_C06.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_41_C06_A002 5', mRNA sequence
Length = 869
Score = 485 bits (244), Expect = e-135
Identities = 280/292 (95%)
Strand = Plus / Plus
Query: 522 ccgctgcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggc 581
|||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 578 ccgcggcgccgcagtgcccgttcccggacgcgtcgctgggcacggcgctcggcacggggc 637
Query: 582 tgttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagtacagcgcgagcg 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 tgttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagtacagcgcgagcg 697
Query: 642 ccggcgtgggcagcctggcgaaagcgtgggcgcagtggacgtccatcagggcggggcggg 701
||||||||||| ||||||||| |||||||||||||||||| |||||||||| || ||||
Sbjct: 698 ccggcgtgggcggcctggcgagcgcgtgggcgcagtggacgcccatcagggccggccggg 757
Query: 702 tgttcctcggcctccccgccgcgccccaggccgctggcagcgggttcgtgccggcgagcg 761
|||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 758 tgttcctcggcctcccggccgcgccacaggccgcgggcagcgggttcgtgccggcgagcg 817
Query: 762 acctcgtggcgcaggtgctgccggtggtcaagaactccaccaagtacggggg 813
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 acctcgtggcgcaggtgctgccggtggtcaagaactccaccaagtacggggg 869
Score = 423 bits (213), Expect = e-116
Identities = 287/313 (91%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 34 gcsgcatcgccatctactggggccagaacggcaacgaggggasg-tggsgcagacctgcg 92
|| ||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 119 gcggcatcgccatctactggggccagaacggcaacgaggggacgctggcgcagacctgcg 178
Query: 93 ccacgggmaactacaggttcgtcaacgtggccttcctccccacgttcggcaaggggcaga 152
||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 179 ccacgggcaactacaagttcgtcaacgtggcgttcctccccacgttcggcaagggccaga 238
Query: 153 cgccggcgcttaacctggcgggccactgcgacccagcgagcggcgggtgcacgggcgtgg 212
|||||| ||| |||||||| |||||||||||||| |||||| |||||||||||||||||
Sbjct: 239 cgccggtgctgaacctggccggccactgcgacccggcgagcaacgggtgcacgggcgtgg 298
Query: 213 gcgcggacgtcaaggcgtgccagcgcatgggcgtcaaggtcctgctctccatcggcgggg 272
|||||||| ||| ||||||||||| |||||| ||||||||||||||||||||||||| |
Sbjct: 299 gcgcggacatcattgcgtgccagcggatgggcatcaaggtcctgctctccatcggcggcg 358
Query: 273 gcgtcggcagctacgggctctcgtcccgggccgacgcccggagcgtcgcggcgtacctct 332
| |||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||
Sbjct: 359 gagtcggcagctacgggctctcgtcccgggacgacgcgaggaccgtcgcggcgtacctct 418
Query: 333 gggacaactacct 345
|| ||||||||||
Sbjct: 419 ggaacaactacct 431
Score = 173 bits (87), Expect = 3e-041
Identities = 103/107 (96%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 380 tccaggcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgagagcggcgg 439
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 448 tccaggccc-ctcggcgacgccgtcctcgacggcatcgacttcgacatcgagagcggcgg 506
Query: 440 gggcatgtactgggacgacctggcccggttcctcaagtcctactccc 486
| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 507 gagcatgtactgggacgacctggccaggttcctcaagtcctactccc 553
>gb|CN128505.1|CN128505 RHOH1_30_A09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_30_A09_A002 3', mRNA sequence
Length = 468
Score = 439 bits (221), Expect = e-121
Identities = 288/308 (93%), Gaps = 3/308 (0%)
Strand = Plus / Plus
Query: 609 acaacaacccgccgtgccagtacagcgcgagcgccggcgtgggcagcctggcgaaagcgt 668
|||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 1 acaacaacccgccgtgtcagtacagcgcgagcgccggcgtgggcggcctggcgagcgcgt 60
Query: 669 gggcgcagtggacgtccatcagggcggggcgggtgttcctcggcctccccgccgcgcccc 728
|||||||||||||| |||||||||| || ||||||||||| |||||||| |||||||| |
Sbjct: 61 gggcgcagtggacgcccatcagggccggccgggtgttcctgggcctcccggccgcgccac 120
Query: 729 aggccgctggcagcgggttcgtgccggcgagcgacctcgtggcgcaggtgctgccggtgg 788
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggccgcgggcagcgggttcgtgccggcgagcgacctcgtggcgcaggtgctgccggtgg 180
Query: 789 tcaagaactccaccaagtacgggggcatcatgctctggtccaggtactacgacgggctca 848
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 181 tcaagaactccaccaagtacgggggaatcatgctctggtccaggtactacgacgggctca 240
Query: 849 cggggtacagcgacgcggtcaagtcctacgtgtgag-ctagccag--cctcgtgtcatgt 905
|||||||||||||||||||||||||| | ||||||| || ||| |||||||||||||
Sbjct: 241 cggggtacagcgacgcggtcaagtcccaagtgtgagagcaggcaggccctcgtgtcatgt 300
Query: 906 cgggcgtg 913
||||||||
Sbjct: 301 cgggcgtg 308
>gb|CD428294.1|CD428294 ETH1_28_B01.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_28_B01_A002 5', mRNA sequence
Length = 535
Score = 423 bits (213), Expect = e-116
Identities = 287/313 (91%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 34 gcsgcatcgccatctactggggccagaacggcaacgaggggasg-tggsgcagacctgcg 92
|| ||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 133 gcggcatcgccatctactggggccagaacggcaacgaggggacgctggcgcagacctgcg 192
Query: 93 ccacgggmaactacaggttcgtcaacgtggccttcctccccacgttcggcaaggggcaga 152
||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 193 ccacgggcaactacaagttcgtcaacgtggcgttcctccccacgttcggcaagggccaga 252
Query: 153 cgccggcgcttaacctggcgggccactgcgacccagcgagcggcgggtgcacgggcgtgg 212
|||||| ||| |||||||| |||||||||||||| |||||| |||||||||||||||||
Sbjct: 253 cgccggtgctgaacctggccggccactgcgacccggcgagcaacgggtgcacgggcgtgg 312
Query: 213 gcgcggacgtcaaggcgtgccagcgcatgggcgtcaaggtcctgctctccatcggcgggg 272
|||||||| ||| ||||||||||| |||||| ||||||||||||||||||||||||| |
Sbjct: 313 gcgcggacatcattgcgtgccagcggatgggcatcaaggtcctgctctccatcggcggcg 372
Query: 273 gcgtcggcagctacgggctctcgtcccgggccgacgcccggagcgtcgcggcgtacctct 332
| |||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||
Sbjct: 373 gagtcggcagctacgggctctcgtcccgggacgacgcgaggaccgtcgcggcgtacctct 432
Query: 333 gggacaactacct 345
|| ||||||||||
Sbjct: 433 ggaacaactacct 445
Score = 117 bits (59), Expect = 2e-024
Identities = 72/75 (96%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 380 tccaggcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgagagcggcgg 439
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 462 tccaggccc-ctcggcgacgccgtcctcgacggcatcgacttcgacatcgagagcggcgg 520
Query: 440 gggcatgtactggga 454
| |||||||||||||
Sbjct: 521 gagcatgtactggga 535
>gb|CD431599.1|CD431599 ETH1_9_B01.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_9_B01_A002 5', mRNA sequence
Length = 635
Score = 423 bits (213), Expect = e-116
Identities = 287/313 (91%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 34 gcsgcatcgccatctactggggccagaacggcaacgaggggasg-tggsgcagacctgcg 92
|| ||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 128 gcggcatcgccatctactggggccagaacggcaacgaggggacgctggcgcagacctgcg 187
Query: 93 ccacgggmaactacaggttcgtcaacgtggccttcctccccacgttcggcaaggggcaga 152
||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 188 ccacgggcaactacaagttcgtcaacgtggcgttcctccccacgttcggcaagggccaga 247
Query: 153 cgccggcgcttaacctggcgggccactgcgacccagcgagcggcgggtgcacgggcgtgg 212
|||||| ||| |||||||| |||||||||||||| |||||| |||||||||||||||||
Sbjct: 248 cgccggtgctgaacctggccggccactgcgacccggcgagcaacgggtgcacgggcgtgg 307
Query: 213 gcgcggacgtcaaggcgtgccagcgcatgggcgtcaaggtcctgctctccatcggcgggg 272
|||||||| ||| ||||||||||| |||||| ||||||||||||||||||||||||| |
Sbjct: 308 gcgcggacatcattgcgtgccagcggatgggcatcaaggtcctgctctccatcggcggcg 367
Query: 273 gcgtcggcagctacgggctctcgtcccgggccgacgcccggagcgtcgcggcgtacctct 332
| |||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||
Sbjct: 368 gagtcggcagctacgggctctcgtcccgggacgacgcgaggaccgtcgcggcgtacctct 427
Query: 333 gggacaactacct 345
|| ||||||||||
Sbjct: 428 ggaacaactacct 440
Score = 173 bits (87), Expect = 3e-041
Identities = 103/107 (96%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 380 tccaggcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgagagcggcgg 439
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 457 tccaggccc-ctcggcgacgccgtcctcgacggcatcgacttcgacatcgagagcggcgg 515
Query: 440 gggcatgtactgggacgacctggcccggttcctcaagtcctactccc 486
| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 516 gagcatgtactgggacgacctggccaggttcctcaagtcctactccc 562
Score = 82.0 bits (41), Expect = 1e-013
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 522 ccgctgcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgct 570
|||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 587 ccgcggcgccgcagtgcccgttcccggacgcgtcgctgggcacggcgct 635
>gb|CD462456.1|CD462456 ETH1_37_H07.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_37_H07_A002 5', mRNA sequence
Length = 675
Score = 423 bits (213), Expect = e-116
Identities = 287/313 (91%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 34 gcsgcatcgccatctactggggccagaacggcaacgaggggasg-tggsgcagacctgcg 92
|| ||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 128 gcggcatcgccatctactggggccagaacggcaacgaggggacgctggcgcagacctgcg 187
Query: 93 ccacgggmaactacaggttcgtcaacgtggccttcctccccacgttcggcaaggggcaga 152
||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 188 ccacgggcaactacaagttcgtcaacgtggcgttcctccccacgttcggcaagggccaga 247
Query: 153 cgccggcgcttaacctggcgggccactgcgacccagcgagcggcgggtgcacgggcgtgg 212
|||||| ||| |||||||| |||||||||||||| |||||| |||||||||||||||||
Sbjct: 248 cgccggtgctgaacctggccggccactgcgacccggcgagcaacgggtgcacgggcgtgg 307
Query: 213 gcgcggacgtcaaggcgtgccagcgcatgggcgtcaaggtcctgctctccatcggcgggg 272
|||||||| ||| ||||||||||| |||||| ||||||||||||||||||||||||| |
Sbjct: 308 gcgcggacatcattgcgtgccagcggatgggcatcaaggtcctgctctccatcggcggcg 367
Query: 273 gcgtcggcagctacgggctctcgtcccgggccgacgcccggagcgtcgcggcgtacctct 332
| |||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||
Sbjct: 368 gagtcggcagctacgggctctcgtcccgggacgacgcgaggaccgtcgcggcgtacctct 427
Query: 333 gggacaactacct 345
|| ||||||||||
Sbjct: 428 ggaacaactacct 440
Score = 173 bits (87), Expect = 3e-041
Identities = 103/107 (96%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 380 tccaggcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgagagcggcgg 439
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 457 tccaggccc-ctcggcgacgccgtcctcgacggcatcgacttcgacatcgagagcggcgg 515
Query: 440 gggcatgtactgggacgacctggcccggttcctcaagtcctactccc 486
| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 516 gagcatgtactgggacgacctggccaggttcctcaagtcctactccc 562
Score = 153 bits (77), Expect = 3e-035
Identities = 86/89 (96%)
Strand = Plus / Plus
Query: 522 ccgctgcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggc 581
|||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 587 ccgcggcgccgcagtgcccgttcccggacgcgtcgctgggcacggcgctcggcacggggc 646
Query: 582 tgttcgactacgtgtgggtgcagttctac 610
|||||||||||||||||||||||||||||
Sbjct: 647 tgttcgactacgtgtgggtgcagttctac 675
>gb|CN128592.1|CN128592 RHOH1_30_A09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_30_A09_A002 5', mRNA sequence
Length = 725
Score = 423 bits (213), Expect = e-116
Identities = 287/313 (91%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 34 gcsgcatcgccatctactggggccagaacggcaacgaggggasg-tggsgcagacctgcg 92
|| ||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 114 gcggcatcgccatctactggggccagaacggcaacgaggggacgctggcgcagacctgcg 173
Query: 93 ccacgggmaactacaggttcgtcaacgtggccttcctccccacgttcggcaaggggcaga 152
||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 174 ccacgggcaactacaagttcgtcaacgtggcgttcctccccacgttcggcaagggccaga 233
Query: 153 cgccggcgcttaacctggcgggccactgcgacccagcgagcggcgggtgcacgggcgtgg 212
|||||| ||| |||||||| |||||||||||||| |||||| |||||||||||||||||
Sbjct: 234 cgccggtgctgaacctggccggccactgcgacccggcgagcaacgggtgcacgggcgtgg 293
Query: 213 gcgcggacgtcaaggcgtgccagcgcatgggcgtcaaggtcctgctctccatcggcgggg 272
|||||||| ||| ||||||||||| |||||| ||||||||||||||||||||||||| |
Sbjct: 294 gcgcggacatcattgcgtgccagcggatgggcatcaaggtcctgctctccatcggcggcg 353
Query: 273 gcgtcggcagctacgggctctcgtcccgggccgacgcccggagcgtcgcggcgtacctct 332
| |||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||
Sbjct: 354 gagtcggcagctacgggctctcgtcccgggacgacgcgaggaccgtcgcggcgtacctct 413
Query: 333 gggacaactacct 345
|| ||||||||||
Sbjct: 414 ggaacaactacct 426
Score = 390 bits (196), Expect = e-106
Identities = 232/244 (95%)
Strand = Plus / Plus
Query: 584 ttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagtacagcgcgagcgcc 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagtacagcgcgagcgcc 541
Query: 644 ggcgtgggcagcctggcgaaagcgtgggcgcagtggacgtccatcagggcggggcgggtg 703
||||||||| ||||||||| |||||||||||||||||| |||||||||| || ||||||
Sbjct: 542 ggcgtgggcggcctggcgagcgcgtgggcgcagtggacgcccatcagggccggccgggtg 601
Query: 704 ttcctcggcctccccgccgcgccccaggccgctggcagcgggttcgtgccggcgagcgac 763
|||||||||||||| |||||||| || ||||| || ||||||||||||||||||||||||
Sbjct: 602 ttcctcggcctcccggccgcgccacacgccgcgggaagcgggttcgtgccggcgagcgac 661
Query: 764 ctcgtggcgcaggtgctgccggtggtcaagaactccaccaagtacgggggcatcatgctc 823
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 662 ctcgtggcgcaggtgctgccggtggtcaagaactccaccaagtacgggggaatcatgctc 721
Query: 824 tggt 827
||||
Sbjct: 722 tggt 725
Score = 60.1 bits (30), Expect = 4e-007
Identities = 43/46 (93%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 380 tccaggcccnctcggcgacgccgtcctcgacggcgtcgacttcgac 425
||||||||| |||||||||||||||||||||||| || ||||||||
Sbjct: 443 tccaggccc-ctcggcgacgccgtcctcgacggcatcaacttcgac 487
>gb|CN131046.1|CN131046 RHOH1_45_B06.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_45_B06_A002 5', mRNA sequence
Length = 729
Score = 423 bits (213), Expect = e-116
Identities = 287/313 (91%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 34 gcsgcatcgccatctactggggccagaacggcaacgaggggasg-tggsgcagacctgcg 92
|| ||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 118 gcggcatcgccatctactggggccagaacggcaacgaggggacgctggcgcagacctgcg 177
Query: 93 ccacgggmaactacaggttcgtcaacgtggccttcctccccacgttcggcaaggggcaga 152
||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 178 ccacgggcaactacaagttcgtcaacgtggcgttcctccccacgttcggcaagggccaga 237
Query: 153 cgccggcgcttaacctggcgggccactgcgacccagcgagcggcgggtgcacgggcgtgg 212
|||||| ||| |||||||| |||||||||||||| |||||| |||||||||||||||||
Sbjct: 238 cgccggtgctgaacctggccggccactgcgacccggcgagcaacgggtgcacgggcgtgg 297
Query: 213 gcgcggacgtcaaggcgtgccagcgcatgggcgtcaaggtcctgctctccatcggcgggg 272
|||||||| ||| ||||||||||| |||||| ||||||||||||||||||||||||| |
Sbjct: 298 gcgcggacatcattgcgtgccagcggatgggcatcaaggtcctgctctccatcggcggcg 357
Query: 273 gcgtcggcagctacgggctctcgtcccgggccgacgcccggagcgtcgcggcgtacctct 332
| |||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||
Sbjct: 358 gagtcggcagctacgggctctcgtcccgggacgacgcgaggaccgtcgcggcgtacctct 417
Query: 333 gggacaactacct 345
|| ||||||||||
Sbjct: 418 ggaacaactacct 430
Score = 248 bits (125), Expect = 6e-064
Identities = 146/153 (95%)
Strand = Plus / Plus
Query: 522 ccgctgcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggc 581
|||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 577 ccgcggcgccgcagtgcccgttcccggacgcgtcgctgggcacggcgctcggcacggggc 636
Query: 582 tgttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagtacagcgcgagcg 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 tgttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagtacagcgcgagcg 696
Query: 642 ccggcgtgggcagcctggcgaaagcgtgggcgc 674
||||||||||| |||||||| ||||||||||
Sbjct: 697 ccggcgtgggcggcctggcgggcgcgtgggcgc 729
Score = 173 bits (87), Expect = 3e-041
Identities = 103/107 (96%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 380 tccaggcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgagagcggcgg 439
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 447 tccaggccc-ctcggcgacgccgtcctcgacggcatcgacttcgacatcgagagcggcgg 505
Query: 440 gggcatgtactgggacgacctggcccggttcctcaagtcctactccc 486
| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 506 gagcatgtactgggacgacctggccaggttcctcaagtcctactccc 552
>gb|CX621557.1|CX621557 GABR1_58_G02.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_58_G02_A002 5', mRNA sequence
Length = 694
Score = 423 bits (213), Expect = e-116
Identities = 287/313 (91%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 34 gcsgcatcgccatctactggggccagaacggcaacgaggggasg-tggsgcagacctgcg 92
|| ||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 119 gcggcatcgccatctactggggccagaacggcaacgaggggacgctggcgcagacctgcg 178
Query: 93 ccacgggmaactacaggttcgtcaacgtggccttcctccccacgttcggcaaggggcaga 152
||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 179 ccacgggcaactacaagttcgtcaacgtggcgttcctccccacgttcggcaagggccaga 238
Query: 153 cgccggcgcttaacctggcgggccactgcgacccagcgagcggcgggtgcacgggcgtgg 212
|||||| ||| |||||||| |||||||||||||| |||||| |||||||||||||||||
Sbjct: 239 cgccggtgctgaacctggccggccactgcgacccggcgagcaacgggtgcacgggcgtgg 298
Query: 213 gcgcggacgtcaaggcgtgccagcgcatgggcgtcaaggtcctgctctccatcggcgggg 272
|||||||| ||| ||||||||||| |||||| ||||||||||||||||||||||||| |
Sbjct: 299 gcgcggacatcattgcgtgccagcggatgggcatcaaggtcctgctctccatcggcggcg 358
Query: 273 gcgtcggcagctacgggctctcgtcccgggccgacgcccggagcgtcgcggcgtacctct 332
| |||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||
Sbjct: 359 gagtcggcagctacgggctctcgtcccgggacgacgcgaggaccgtcgcggcgtacctct 418
Query: 333 gggacaactacct 345
|| ||||||||||
Sbjct: 419 ggaacaactacct 431
Score = 193 bits (97), Expect = 3e-047
Identities = 106/109 (97%)
Strand = Plus / Plus
Query: 522 ccgctgcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggc 581
|||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 578 ccgcggcgccgcagtgcccgttcccggacgcgtcgctgggcacggcgctcggcacggggc 637
Query: 582 tgttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagta 630
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 tgttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagta 686
Score = 173 bits (87), Expect = 3e-041
Identities = 103/107 (96%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 380 tccaggcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgagagcggcgg 439
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 448 tccaggccc-ctcggcgacgccgtcctcgacggcatcgacttcgacatcgagagcggcgg 506
Query: 440 gggcatgtactgggacgacctggcccggttcctcaagtcctactccc 486
| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 507 gagcatgtactgggacgacctggccaggttcctcaagtcctactccc 553
>gb|CW395362.1|CW395362 fsbb001f083f21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f083f21, DNA
sequence
Length = 768
Score = 147 bits (74), Expect = 2e-033
Identities = 101/110 (91%)
Strand = Plus / Minus
Query: 522 ccgctgcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggc 581
|||| ||||||||||||||||||||||||||||| |||| ||||||| ||||||||
Sbjct: 482 ccgcggcgccgcagtgcccgttcccggacgcgtccctggcggtggcgctcggcacggggc 423
Query: 582 tgttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagtac 631
|||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgttcgaccacgtgtgggtgcagttctacaacaacccgccgtgccagtac 373
Score = 64.1 bits (32), Expect = 3e-008
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 385 gcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgag 431
|||| |||||||| || || |||||||||||||||||||||||||||
Sbjct: 614 gcccgctcggcgatgcggtgctcgacggcgtcgacttcgacatcgag 568
>gb|BZ339874.1|BZ339874 ic35d04.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic35d04 5', DNA sequence
Length = 578
Score = 127 bits (64), Expect = 2e-027
Identities = 97/108 (89%)
Strand = Plus / Minus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
|||||||||||||||||||||||||| | | | ||| ||| |||||||| ||||||||
Sbjct: 498 gcgccgcagtgcccgttcccggacgcctgggtcggcggcgccctcgccacccggctgttc 439
Query: 587 gactacgtgtgggtgcagttctacaacaacccgccgtgccagtacagc 634
|||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 438 gactacgtctgggtgcagttctacaacaacccgccatgccagtacagc 391
Score = 40.2 bits (20), Expect = 0.39
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 704 ttcctcggcctccccgccgcgccccaggccgctggcagcgggtt 747
|||||||||||||| || |||| ||||| || |||||||||||
Sbjct: 324 ttcctcggcctcccggcatcgcctcaggcggccggcagcgggtt 281
>gb|BZ339873.1|BZ339873 ic35d04.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic35d04 5', DNA sequence
Length = 561
Score = 117 bits (59), Expect = 2e-024
Identities = 165/201 (82%)
Strand = Plus / Plus
Query: 86 acctgcgccacgggmaactacaggttcgtcaacgtggccttcctccccacgttcggcaag 145
|||||||| ||||| ||||||| ||||||||| | |||||||| | ||||||||||
Sbjct: 301 acctgcgcgacgggcaactacaagttcgtcaatatcgccttcctggcggcgttcggcaac 360
Query: 146 gggcagacgccggcgcttaacctggcgggccactgcgacccagcgagcggcgggtgcacg 205
|||||| |||||| | | ||||||||||| ||||||||||| | | |||||||||| ||
Sbjct: 361 gggcagccgccggtgttcaacctggcggggcactgcgacccgaccaacggcgggtgcgcg 420
Query: 206 ggcgtgggcgcggacgtcaaggcgtgccagcgcatgggcgtcaaggtcctgctctccatc 265
|| | |||| ||| ||||| |||||||| || ||||||||||| |||||||||||
Sbjct: 421 agccagagcgccgacatcaagtcgtgccagagccgcggcgtcaaggtgatgctctccatc 480
Query: 266 ggcgggggcgtcggcagctac 286
||||| |||| ||||||||||
Sbjct: 481 ggcggcggcgccggcagctac 501
Score = 46.2 bits (23), Expect = 0.006
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 37 gcatcgccatctactggggccagaacg 63
||||| |||||||||||||||||||||
Sbjct: 251 gcatctccatctactggggccagaacg 277
>gb|CW259260.1|CW259260 104_725_11228327_116_35182_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11228327, DNA
sequence
Length = 455
Score = 113 bits (57), Expect = 3e-023
Identities = 87/97 (89%)
Strand = Plus / Minus
Query: 522 ccgctgcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggc 581
|||| |||||||||||||||||||||||||| | || ||| | ||||||||||||| ||
Sbjct: 347 ccgcggcgccgcagtgcccgttcccggacgccttcctcggcgcggcgctcgccacggagc 288
Query: 582 tgttcgactacgtgtgggtgcagttctacaacaaccc 618
||||||||||||| ||||| |||||||||||||||||
Sbjct: 287 tgttcgactacgtttgggtacagttctacaacaaccc 251
Score = 54.1 bits (27), Expect = 3e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 394 gcgacgccgtcctcgacggcgtcgacttcgacatc 428
|||||||||| ||||||||| ||||||||||||||
Sbjct: 455 gcgacgccgttctcgacggcatcgacttcgacatc 421
Score = 52.2 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 771 cgcaggtgctgccggtggtcaagaactccaccaagtacgggggcatcatg 820
|||| |||||||||||||||||| |||| | |||||||| |||||||||
Sbjct: 89 cgcatgtgctgccggtggtcaagggctccgcaaagtacggcggcatcatg 40
>gb|CW341793.1|CW341793 104_843_11486523_116_36161_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11486523, DNA
sequence
Length = 691
Score = 113 bits (57), Expect = 3e-023
Identities = 87/97 (89%)
Strand = Plus / Minus
Query: 522 ccgctgcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggc 581
|||| |||||||||||||||||||||||||| | || ||| | ||||||||||||| ||
Sbjct: 365 ccgcggcgccgcagtgcccgttcccggacgccttcctcggcgcggcgctcgccacggagc 306
Query: 582 tgttcgactacgtgtgggtgcagttctacaacaaccc 618
||||||||||||| ||||| |||||||||||||||||
Sbjct: 305 tgttcgactacgtttgggtacagttctacaacaaccc 269
Score = 62.1 bits (31), Expect = 1e-007
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 390 ctcggcgacgccgtcctcgacggcgtcgacttcgacatc 428
|||||||||||||| ||||||||| ||||||||||||||
Sbjct: 477 ctcggcgacgccgttctcgacggcatcgacttcgacatc 439
Score = 52.2 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 771 cgcaggtgctgccggtggtcaagaactccaccaagtacgggggcatcatg 820
|||| |||||||||||||||||| |||| | |||||||| |||||||||
Sbjct: 107 cgcatgtgctgccggtggtcaagggctccgcaaagtacggcggcatcatg 58
>gb|CW341794.1|CW341794 104_843_11486523_148_36162_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11486523, DNA
sequence
Length = 695
Score = 113 bits (57), Expect = 3e-023
Identities = 87/97 (89%)
Strand = Plus / Plus
Query: 522 ccgctgcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggc 581
|||| |||||||||||||||||||||||||| | || ||| | ||||||||||||| ||
Sbjct: 586 ccgcggcgccgcagtgcccgttcccggacgccttcctcggcgcggcgctcgccacggagc 645
Query: 582 tgttcgactacgtgtgggtgcagttctacaacaaccc 618
||||||||||||| ||||| |||||||||||||||||
Sbjct: 646 tgttcgactacgtttgggtacagttctacaacaaccc 682
Score = 62.1 bits (31), Expect = 1e-007
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 390 ctcggcgacgccgtcctcgacggcgtcgacttcgacatc 428
|||||||||||||| ||||||||| ||||||||||||||
Sbjct: 474 ctcggcgacgccgttctcgacggcatcgacttcgacatc 512
>gb|CW355490.1|CW355490 fsbb001f020c09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f020c09, DNA
sequence
Length = 710
Score = 113 bits (57), Expect = 3e-023
Identities = 87/97 (89%)
Strand = Plus / Minus
Query: 522 ccgctgcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggc 581
|||| |||||||||||||||||||||||||| | || ||| | ||||||||||||| ||
Sbjct: 368 ccgcggcgccgcagtgcccgttcccggacgccttcctcggcgcggcgctcgccacggagc 309
Query: 582 tgttcgactacgtgtgggtgcagttctacaacaaccc 618
||||||||||||| ||||| |||||||||||||||||
Sbjct: 308 tgttcgactacgtttgggtacagttctacaacaaccc 272
Score = 62.1 bits (31), Expect = 1e-007
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 390 ctcggcgacgccgtcctcgacggcgtcgacttcgacatc 428
|||||||||||||| ||||||||| ||||||||||||||
Sbjct: 480 ctcggcgacgccgttctcgacggcatcgacttcgacatc 442
Score = 52.2 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 771 cgcaggtgctgccggtggtcaagaactccaccaagtacgggggcatcatg 820
|||| |||||||||||||||||| |||| | |||||||| |||||||||
Sbjct: 110 cgcatgtgctgccggtggtcaagggctccgcaaagtacggcggcatcatg 61
>gb|CW418302.1|CW418302 fsbb001f121l05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f121l05, DNA
sequence
Length = 690
Score = 113 bits (57), Expect = 3e-023
Identities = 87/97 (89%)
Strand = Plus / Minus
Query: 522 ccgctgcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggc 581
|||| |||||||||||||||||||||||||| | || ||| | ||||||||||||| ||
Sbjct: 263 ccgcggcgccgcagtgcccgttcccggacgccttcctcggcgcggcgctcgccacggagc 204
Query: 582 tgttcgactacgtgtgggtgcagttctacaacaaccc 618
||||||||||||| ||||| |||||||||||||||||
Sbjct: 203 tgttcgactacgtttgggtacagttctacaacaaccc 167
Score = 62.1 bits (31), Expect = 1e-007
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 390 ctcggcgacgccgtcctcgacggcgtcgacttcgacatc 428
|||||||||||||| ||||||||| ||||||||||||||
Sbjct: 375 ctcggcgacgccgttctcgacggcatcgacttcgacatc 337
>gb|BZ329334.1|BZ329334 hv85c02.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hv85c02 5', DNA sequence
Length = 630
Score = 107 bits (54), Expect = 2e-021
Identities = 90/102 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
||||||||||||||||||||||||| || | | |||| ||| |||||||||||||
Sbjct: 292 gcgccgcagtgcccgttcccggacgagtgggacaacggcgcgatcgacacggggctgttc 351
Query: 587 gactacgtgtgggtgcagttctacaacaacccgccgtgccag 628
|||||||||||||||||||||||||||||||| |||||||||
Sbjct: 352 gactacgtgtgggtgcagttctacaacaacccaccgtgccag 393
Score = 64.1 bits (32), Expect = 3e-008
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 385 gcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgag 431
|||| ||||||||||||||||| |||||| | |||||||||||||||
Sbjct: 64 gccccctcggcgacgccgtccttgacggcattgacttcgacatcgag 110
Score = 52.2 bits (26), Expect = 1e-004
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 801 ccaagtacgggggcatcatgctctggtccaggtactacgacg 842
|||||||||| ||| ||||||||||||||| |||||||||||
Sbjct: 559 ccaagtacggcggcgtcatgctctggtcca-gtactacgacg 599
>gb|CL160680.1|CL160680 104_351_10805155_114_31824_211 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10805155, DNA
sequence
Length = 612
Score = 107 bits (54), Expect = 2e-021
Identities = 90/102 (88%)
Strand = Plus / Minus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
||||||||||||||||||||||||| || | | |||| ||| |||||||||||||
Sbjct: 312 gcgccgcagtgcccgttcccggacgagtgggacaacggcgcgatcgacacggggctgttc 253
Query: 587 gactacgtgtgggtgcagttctacaacaacccgccgtgccag 628
|||||||||||||||||||||||||||||||| |||||||||
Sbjct: 252 gactacgtgtgggtgcagttctacaacaacccaccgtgccag 211
Score = 56.1 bits (28), Expect = 6e-006
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 385 gcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgag 431
|||| ||||||||||||||||| || ||| | |||||||||||||||
Sbjct: 540 gccccctcggcgacgccgtccttgatggcattgacttcgacatcgag 494
Score = 44.2 bits (22), Expect = 0.025
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 801 ccaagtacgggggcatcatgctctggtcca 830
|||||||||| ||| |||||||||||||||
Sbjct: 44 ccaagtacggcggcgtcatgctctggtcca 15
>gb|CW053505.1|CW053505 104_293_10516001_115_30191 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10516001, DNA
sequence
Length = 538
Score = 107 bits (54), Expect = 2e-021
Identities = 90/102 (88%)
Strand = Plus / Minus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
||||||||||||||||||||||||| || | | |||| ||| |||||||||||||
Sbjct: 349 gcgccgcagtgcccgttcccggacgagtgggacaacggcgcgatcgacacggggctgttc 290
Query: 587 gactacgtgtgggtgcagttctacaacaacccgccgtgccag 628
|||||||||||||||||||||||||||||||| |||||||||
Sbjct: 289 gactacgtgtgggtgcagttctacaacaacccaccgtgccag 248
Score = 60.1 bits (30), Expect = 4e-007
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 801 ccaagtacgggggcatcatgctctggtccaggtactacgacg 842
|||||||||| ||| ||||||||||||||| |||||||||||
Sbjct: 81 ccaagtacggcggcgtcatgctctggtccaagtactacgacg 40
>gb|CW089404.1|CW089404 104_434_10948691_114_32582_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948691, DNA
sequence
Length = 682
Score = 107 bits (54), Expect = 2e-021
Identities = 90/102 (88%)
Strand = Plus / Minus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
||||||||||||||||||||||||| || | | |||| ||| |||||||||||||
Sbjct: 287 gcgccgcagtgcccgttcccggacgagtgggacaacggcgcgatcgacacggggctgttc 228
Query: 587 gactacgtgtgggtgcagttctacaacaacccgccgtgccag 628
|||||||||||||||||||||||||||||||| |||||||||
Sbjct: 227 gactacgtgtgggtgcagttctacaacaacccaccgtgccag 186
Score = 76.0 bits (38), Expect = 7e-012
Identities = 98/118 (83%)
Strand = Plus / Minus
Query: 228 cgtgccagcgcatgggcgtcaaggtcctgctctccatcggcgggggcgtcggcagctacg 287
|||||||| ||| |||||||||||||||||||| |||||||| || | |||||||||||
Sbjct: 653 cgtgccagagcagcggcgtcaaggtcctgctctcgatcggcggcggtgacggcagctacg 594
Query: 288 ggctctcgtcccgggccgacgcccggagcgtcgcggcgtacctctgggacaactacct 345
| || ||||||| || ||||| ||| ||| || || ||||||||| |||| |||||
Sbjct: 593 gcctgtcgtcccagggagacgcgcgggacgtggccgcctacctctggaacaattacct 536
Score = 64.1 bits (32), Expect = 3e-008
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 385 gcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgag 431
|||| ||||||||||||||||| |||||| | |||||||||||||||
Sbjct: 515 gccccctcggcgacgccgtccttgacggcattgacttcgacatcgag 469
>gb|CW160563.1|CW160563 104_567_11149954_116_36419_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149954, DNA
sequence
Length = 643
Score = 107 bits (54), Expect = 2e-021
Identities = 90/102 (88%)
Strand = Plus / Minus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
||||||||||||||||||||||||| || | | |||| ||| |||||||||||||
Sbjct: 325 gcgccgcagtgcccgttcccggacgagtgggacaacggcgcgatcgacacggggctgttc 266
Query: 587 gactacgtgtgggtgcagttctacaacaacccgccgtgccag 628
|||||||||||||||||||||||||||||||| |||||||||
Sbjct: 265 gactacgtgtgggtgcagttctacaacaacccaccgtgccag 224
Score = 60.1 bits (30), Expect = 4e-007
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 801 ccaagtacgggggcatcatgctctggtccaggtactacgacg 842
|||||||||| ||| ||||||||||||||| |||||||||||
Sbjct: 57 ccaagtacggcggcgtcatgctctggtccaagtactacgacg 16
Score = 58.1 bits (29), Expect = 2e-006
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 391 tcggcgacgccgtcctcgacggcgtcgacttcgacatcgag 431
|||||||||||||||| |||||| | |||||||||||||||
Sbjct: 547 tcggcgacgccgtccttgacggcattgacttcgacatcgag 507
>gb|CW215614.1|CW215614 104_648_11194634_116_37120_015 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194634, DNA
sequence
Length = 631
Score = 107 bits (54), Expect = 2e-021
Identities = 90/102 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
||||||||||||||||||||||||| || | | |||| ||| |||||||||||||
Sbjct: 374 gcgccgcagtgcccgttcccggacgagtgggacaacggcgcgatcgacacggggctgttc 433
Query: 587 gactacgtgtgggtgcagttctacaacaacccgccgtgccag 628
|||||||||||||||||||||||||||||||| |||||||||
Sbjct: 434 gactacgtgtgggtgcagttctacaacaacccaccgtgccag 475
Score = 68.1 bits (34), Expect = 2e-009
Identities = 97/118 (82%)
Strand = Plus / Plus
Query: 228 cgtgccagcgcatgggcgtcaaggtcctgctctccatcggcgggggcgtcggcagctacg 287
|||||||| ||| ||||||||||||||||| || |||||||| || | |||||||||||
Sbjct: 8 cgtgccagagcagcggcgtcaaggtcctgctgtcgatcggcggcggtgacggcagctacg 67
Query: 288 ggctctcgtcccgggccgacgcccggagcgtcgcggcgtacctctgggacaactacct 345
| || ||||||| || ||||| ||| ||| || || ||||||||| |||| |||||
Sbjct: 68 gcctgtcgtcccagggagacgcgcgggacgtggccgcctacctctggaacaattacct 125
Score = 64.1 bits (32), Expect = 3e-008
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 385 gcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgag 431
|||| ||||||||||||||||| |||||| | |||||||||||||||
Sbjct: 146 gccccctcggcgacgccgtccttgacggcattgacttcgacatcgag 192
>gb|CN138199.1|CN138199 OX1_62_G05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_62_G05_A002 3', mRNA sequence
Length = 667
Score = 103 bits (52), Expect = 3e-020
Identities = 82/92 (89%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 181 gcgccgcagtgcccgttcccggacgcgtcgctgggagccgcgctgcagacggggcagttc 240
Query: 587 gactacgtgtgggtgcagttctacaacaaccc 618
||| |||||||| | |||||||||||||||||
Sbjct: 241 gacaacgtgtggatccagttctacaacaaccc 272
Score = 66.1 bits (33), Expect = 6e-009
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 385 gcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgaga 432
|||| || |||| |||||| ||||||||||||||||||||||||||||
Sbjct: 62 gcccgctgggcgccgccgtgctcgacggcgtcgacttcgacatcgaga 109
>gb|CN142263.1|CN142263 WOUND1_4_G11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_4_G11_A002 5', mRNA sequence
Length = 760
Score = 97.9 bits (49), Expect = 2e-018
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
|||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 645 gcgccgcagtgcccgtacccggacgcgtcgctgggagccgcgctgcagacggggcagttc 704
Query: 587 gactacgtgtgggtgcagttctacaacaaccc 618
||| |||||||| | |||||||||||||||||
Sbjct: 705 gacnacgtgtggatccagttctacaacaaccc 736
Score = 66.1 bits (33), Expect = 6e-009
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 385 gcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgaga 432
|||| || |||| |||||| ||||||||||||||||||||||||||||
Sbjct: 526 gcccgctgggcgccgccgtgctcgacggcgtcgacttcgacatcgaga 573
Score = 48.2 bits (24), Expect = 0.002
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 39 atcgccatctactggggccagaacggcaacga 70
|||||| | |||||||||||||||||||||||
Sbjct: 195 atcgccgtgtactggggccagaacggcaacga 226
Score = 44.2 bits (22), Expect = 0.025
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 241 gggcgtcaaggtcctgctctccatcggcgggggcgtcggcagctacgggctctcgtcc 298
|||| ||||||| || |||||||||||||| | | |||||||||||| || ||||||
Sbjct: 398 gggcatcaaggtgctcctctccatcggcggcgccaccggcagctacggcctgtcgtcc 455
>gb|AW565780.1|AW565780 LG1_349_C11.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 558
Score = 95.9 bits (48), Expect = 7e-018
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
|||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 62 gcgccgcagtgcccgtacccggacgcgtcgctgggagccgcgctgcagacggggcagttc 121
Query: 587 gactacgtgtgggtgcagttctacaacaaccc 618
||| |||||||| | |||||||||||||||||
Sbjct: 122 gacaacgtgtggatccagttctacaacaaccc 153
>gb|AW678571.1|AW678571 WS1_16_H04.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 570
Score = 95.9 bits (48), Expect = 7e-018
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
|||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 74 gcgccgcagtgcccgtacccggacgcgtcgctgggagccgcgctgcagacggggcagttc 133
Query: 587 gactacgtgtgggtgcagttctacaacaaccc 618
||| |||||||| | |||||||||||||||||
Sbjct: 134 gacaacgtgtggatccagttctacaacaaccc 165
>gb|AW679587.1|AW679587 WS1_2_F10.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 595
Score = 95.9 bits (48), Expect = 7e-018
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
|||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 99 gcgccgcagtgcccgtacccggacgcgtcgctgggagccgcgctgcagacggggcagttc 158
Query: 587 gactacgtgtgggtgcagttctacaacaaccc 618
||| |||||||| | |||||||||||||||||
Sbjct: 159 gacaacgtgtggatccagttctacaacaaccc 190
Score = 54.1 bits (27), Expect = 3e-005
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 406 tcgacggcgtcgacttcgacatcgaga 432
|||||||||||||||||||||||||||
Sbjct: 1 tcgacggcgtcgacttcgacatcgaga 27
>gb|AW679710.1|AW679710 WS1_30_B01.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 531
Score = 95.9 bits (48), Expect = 7e-018
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
|||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 35 gcgccgcagtgcccgtacccggacgcgtcgctgggagccgcgctgcagacggggcagttc 94
Query: 587 gactacgtgtgggtgcagttctacaacaaccc 618
||| |||||||| | |||||||||||||||||
Sbjct: 95 gacaacgtgtggatccagttctacaacaaccc 126
>gb|AW680560.1|AW680560 WS1_5_E12.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 575
Score = 95.9 bits (48), Expect = 7e-018
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
|||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 79 gcgccgcagtgcccgtacccggacgcgtcgctgggagccgcgctgcagacggggcagttc 138
Query: 587 gactacgtgtgggtgcagttctacaacaaccc 618
||| |||||||| | |||||||||||||||||
Sbjct: 139 gacaacgtgtggatccagttctacaacaaccc 170
>gb|AW746114.1|AW746114 WS1_39_D12.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 571
Score = 95.9 bits (48), Expect = 7e-018
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
|||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 75 gcgccgcagtgcccgtacccggacgcgtcgctgggagccgcgctgcagacggggcagttc 134
Query: 587 gactacgtgtgggtgcagttctacaacaaccc 618
||| |||||||| | |||||||||||||||||
Sbjct: 135 gacaacgtgtggatccagttctacaacaaccc 166
>gb|AW746359.1|AW746359 WS1_49_B08.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 579
Score = 95.9 bits (48), Expect = 7e-018
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
|||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 83 gcgccgcagtgcccgtacccggacgcgtcgctgggagccgcgctgcagacggggcagttc 142
Query: 587 gactacgtgtgggtgcagttctacaacaaccc 618
||| |||||||| | |||||||||||||||||
Sbjct: 143 gacaacgtgtggatccagttctacaacaaccc 174
>gb|AW747218.1|AW747218 WS1_66_B10.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 594
Score = 95.9 bits (48), Expect = 7e-018
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
|||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 98 gcgccgcagtgcccgtacccggacgcgtcgctgggagccgcgctgcagacggggcagttc 157
Query: 587 gactacgtgtgggtgcagttctacaacaaccc 618
||| |||||||| | |||||||||||||||||
Sbjct: 158 gacaacgtgtggatccagttctacaacaaccc 189
Score = 52.2 bits (26), Expect = 1e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 407 cgacggcgtcgacttcgacatcgaga 432
||||||||||||||||||||||||||
Sbjct: 1 cgacggcgtcgacttcgacatcgaga 26
>gb|AW924093.1|AW924093 WS1_49_B08.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 526
Score = 95.9 bits (48), Expect = 7e-018
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
|||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 158 gcgccgcagtgcccgtacccggacgcgtcgctgggagccgcgctgcagacggggcagttc 217
Query: 587 gactacgtgtgggtgcagttctacaacaaccc 618
||| |||||||| | |||||||||||||||||
Sbjct: 218 gacaacgtgtggatccagttctacaacaaccc 249
Score = 66.1 bits (33), Expect = 6e-009
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 385 gcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgaga 432
|||| || |||| |||||| ||||||||||||||||||||||||||||
Sbjct: 39 gcccgctgggcgccgccgtgctcgacggcgtcgacttcgacatcgaga 86
>gb|AW924646.1|AW924646 WS1_71_G08.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 570
Score = 95.9 bits (48), Expect = 7e-018
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
|||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 383 gcgccgcagtgcccgtacccggacgcgtcgctgggagccgcgctgcagacggggcagttc 442
Query: 587 gactacgtgtgggtgcagttctacaacaaccc 618
||| |||||||| | |||||||||||||||||
Sbjct: 443 gacaacgtgtggatccagttctacaacaaccc 474
Score = 66.1 bits (33), Expect = 6e-009
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 385 gcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgaga 432
|||| || |||| |||||| ||||||||||||||||||||||||||||
Sbjct: 264 gcccgctgggcgccgccgtgctcgacggcgtcgacttcgacatcgaga 311
Score = 44.2 bits (22), Expect = 0.025
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 241 gggcgtcaaggtcctgctctccatcggcgggggcgtcggcagctacgggctctcgtcc 298
|||| ||||||| || |||||||||||||| | | |||||||||||| || ||||||
Sbjct: 136 gggcatcaaggtgctcctctccatcggcggcgccaccggcagctacggcctgtcgtcc 193
>gb|BE355855.1|BE355855 DG1_11_D03.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 516
Score = 95.9 bits (48), Expect = 7e-018
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
|||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 344 gcgccgcagtgcccgtacccggacgcgtcgctgggagccgcgctgcagacggggcagttc 403
Query: 587 gactacgtgtgggtgcagttctacaacaaccc 618
||| |||||||| | |||||||||||||||||
Sbjct: 404 gacaacgtgtggatccagttctacaacaaccc 435
Score = 66.1 bits (33), Expect = 6e-009
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 385 gcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgaga 432
|||| || |||| |||||| ||||||||||||||||||||||||||||
Sbjct: 225 gcccgctgggcgccgccgtgctcgacggcgtcgacttcgacatcgaga 272
Score = 44.2 bits (22), Expect = 0.025
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 241 gggcgtcaaggtcctgctctccatcggcgggggcgtcggcagctacgggctctcgtcc 298
|||| ||||||| || |||||||||||||| | | |||||||||||| || ||||||
Sbjct: 97 gggcatcaaggtgctcctctccatcggcggcgccaccggcagctacggcctgtcgtcc 154
>gb|BE355912.1|BE355912 DG1_11_D03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 556
Score = 95.9 bits (48), Expect = 7e-018
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
|||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 144 gcgccgcagtgcccgtacccggacgcgtcgctgggagccgcgctgcagacggggcagttc 203
Query: 587 gactacgtgtgggtgcagttctacaacaaccc 618
||| |||||||| | |||||||||||||||||
Sbjct: 204 gacaacgtgtggatccagttctacaacaaccc 235
Score = 66.1 bits (33), Expect = 6e-009
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 385 gcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgaga 432
|||| || |||| |||||| ||||||||||||||||||||||||||||
Sbjct: 25 gcccgctgggcgccgccgtgctcgacggcgtcgacttcgacatcgaga 72
>gb|BE357093.1|BE357093 DG1_146_F08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 626
Score = 95.9 bits (48), Expect = 7e-018
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
|||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 159 gcgccgcagtgcccgtacccggacgcgtcgctgggagccgcgctgcagacggggcagttc 218
Query: 587 gactacgtgtgggtgcagttctacaacaaccc 618
||| |||||||| | |||||||||||||||||
Sbjct: 219 gacaacgtgtggatccagttctacaacaaccc 250
Score = 66.1 bits (33), Expect = 6e-009
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 385 gcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgaga 432
|||| || |||| |||||| ||||||||||||||||||||||||||||
Sbjct: 40 gcccgctgggcgccgccgtgctcgacggcgtcgacttcgacatcgaga 87
>gb|BE357351.1|BE357351 DG1_148_C03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 668
Score = 95.9 bits (48), Expect = 7e-018
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
|||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 188 gcgccgcagtgcccgtacccggacgcgtcgctgggagccgcgctgcagacggggcagttc 247
Query: 587 gactacgtgtgggtgcagttctacaacaaccc 618
||| |||||||| | |||||||||||||||||
Sbjct: 248 gacaacgtgtggatccagttctacaacaaccc 279
Score = 66.1 bits (33), Expect = 6e-009
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 385 gcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgaga 432
|||| || |||| |||||| ||||||||||||||||||||||||||||
Sbjct: 69 gcccgctgggcgccgccgtgctcgacggcgtcgacttcgacatcgaga 116
>gb|BE360701.1|BE360701 DG1_66_D03.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 500
Score = 95.9 bits (48), Expect = 7e-018
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
|||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 338 gcgccgcagtgcccgtacccggacgcgtcgctgggagccgcgctgcagacggggcagttc 397
Query: 587 gactacgtgtgggtgcagttctacaacaaccc 618
||| |||||||| | |||||||||||||||||
Sbjct: 398 gacaacgtgtggatccagttctacaacaaccc 429
Score = 66.1 bits (33), Expect = 6e-009
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 385 gcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgaga 432
|||| || |||| |||||| ||||||||||||||||||||||||||||
Sbjct: 219 gcccgctgggcgccgccgtgctcgacggcgtcgacttcgacatcgaga 266
Score = 44.2 bits (22), Expect = 0.025
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 241 gggcgtcaaggtcctgctctccatcggcgggggcgtcggcagctacgggctctcgtcc 298
|||| ||||||| || |||||||||||||| | | |||||||||||| || ||||||
Sbjct: 91 gggcatcaaggtgctcctctccatcggcggcgccaccggcagctacggcctgtcgtcc 148
>gb|BE361382.1|BE361382 DG1_71_G07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 264
Score = 95.9 bits (48), Expect = 7e-018
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
|||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 42 gcgccgcagtgcccgtacccggacgcgtcgctgggagccgcgctgcagacggggcagttc 101
Query: 587 gactacgtgtgggtgcagttctacaacaaccc 618
||| |||||||| | |||||||||||||||||
Sbjct: 102 gacaacgtgtggatccagttctacaacaaccc 133
>gb|BE362194.1|BE362194 DG1_85_A01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 559
Score = 95.9 bits (48), Expect = 7e-018
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
|||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 46 gcgccgcagtgcccgtacccggacgcgtcgctgggagccgcgctgcagacggggcagttc 105
Query: 587 gactacgtgtgggtgcagttctacaacaaccc 618
||| |||||||| | |||||||||||||||||
Sbjct: 106 gacaacgtgtggatccagttctacaacaaccc 137
>gb|BE362271.1|BE362271 DG1_85_A01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 529
Score = 95.9 bits (48), Expect = 7e-018
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
|||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 46 gcgccgcagtgcccgtacccggacgcgtcgctgggagccgcgctgcagacggggcagttc 105
Query: 587 gactacgtgtgggtgcagttctacaacaaccc 618
||| |||||||| | |||||||||||||||||
Sbjct: 106 gacaacgtgtggatccagttctacaacaaccc 137
>gb|BE363166.1|BE363166 DG1_9_F12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 417
Score = 95.9 bits (48), Expect = 7e-018
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
|||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 190 gcgccgcagtgcccgtacccggacgcgtcgctgggagccgcgctgcagacggggcagttc 249
Query: 587 gactacgtgtgggtgcagttctacaacaaccc 618
||| |||||||| | |||||||||||||||||
Sbjct: 250 gacaacgtgtggatccagttctacaacaaccc 281
Score = 66.1 bits (33), Expect = 6e-009
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 385 gcccnctcggcgacgccgtcctcgacggcgtcgacttcgacatcgaga 432
|||| || |||| |||||| ||||||||||||||||||||||||||||
Sbjct: 71 gcccgctgggcgccgccgtgctcgacggcgtcgacttcgacatcgaga 118
>gb|BE363774.1|BE363774 WS1_71_A01.g2_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 531
Score = 95.9 bits (48), Expect = 7e-018
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 527 gcgccgcagtgcccgttcccggacgcgtcgctgggcaccgcgctcgccacggggctgttc 586
|||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 119 gcgccgcagtgcccgtacccggacgcgtcgctgggagccgcgctgcagacggggcagttc 178
Query: 587 gactacgtgtgggtgcagttctacaacaaccc 618
||| |||||||| | |||||||||||||||||
Sbjct: 179 gacaacgtgtggatccagttctacaacaaccc 210
Score = 64.1 bits (32), Expect = 3e-008
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 393 ggcgacgccgtcctcgacggcgtcgacttcgacatcgaga 432
|||| |||||| ||||||||||||||||||||||||||||
Sbjct: 8 ggcgccgccgtgctcgacggcgtcgacttcgacatcgaga 47
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 283,395
Number of Sequences: 832831
Number of extensions: 283395
Number of successful extensions: 81133
Number of sequences better than 0.5: 354
Number of HSP's better than 0.5 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80069
Number of HSP's gapped (non-prelim): 944
length of query: 1078
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1058
effective length of database: 474,703,049
effective search space: 502235825842
effective search space used: 502235825842
T: 0
A: 0
X1: 11 (21.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 20 (40.2 bits)