BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8010573.2.1
(1223 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW111253.1|CW111253 104_484_11104205_148_34527_023 Sorgh... 793 0.0
gb|CN146506.1|CN146506 WOUND1_41_D07.g1_A002 Wounded leaves... 706 0.0
gb|BG605826.1|BG605826 RHIZ2_81_H11.g1_A003 Rhizome2 (RHIZ2... 690 0.0
gb|CW111252.1|CW111252 104_484_11104205_116_34531_023 Sorgh... 684 0.0
gb|CD211530.1|CD211530 HS1_60_G11.g1_A012 Heat-shocked seed... 674 0.0
gb|CX622346.1|CX622346 GABR1_63_A06.g2_A002 GA- or brassino... 674 0.0
gb|CX618502.1|CX618502 GABR1_40_B04.b1_A002 GA- or brassino... 666 0.0
gb|CN142828.1|CN142828 WOUND1_12_B12.g1_A002 Wounded leaves... 660 0.0
gb|CN146426.1|CN146426 WOUND1_41_D07.b1_A002 Wounded leaves... 654 0.0
gb|CD204116.1|CD204116 HS1_3_F11.g1_A012 Heat-shocked seedl... 640 0.0
gb|CD206117.1|CD206117 HS1_20_F09.g1_A012 Heat-shocked seed... 638 0.0
gb|BE356755.1|BE356755 DG1_12_C08.g1_A002 Dark Grown 1 (DG1... 585 e-165
gb|CX618587.1|CX618587 GABR1_40_B04.g1_A002 GA- or brassino... 575 e-162
gb|CN147743.1|CN147743 WOUND1_51_G03.g1_A002 Wounded leaves... 555 e-156
gb|BG649569.1|BG649569 RHIZ2_81_H11.b1_A003 Rhizome2 (RHIZ2... 533 e-149
gb|CW355876.1|CW355876 fsbb001f020l09k0 Sorghum methylation... 527 e-148
gb|CD207433.1|CD207433 HS1_65_F03.g1_A012 Heat-shocked seed... 523 e-146
gb|AW672522.1|AW672522 LG1_360_D12.b1_A002 Light Grown 1 (L... 521 e-146
gb|CW218469.1|CW218469 104_652_11196207_116_37528_062 Sorgh... 507 e-142
gb|CX621324.1|CX621324 GABR1_57_A12.g1_A002 GA- or brassino... 504 e-140
gb|AW285132.1|AW285132 LG1_206_E11.g1_A002 Light Grown 1 (L... 500 e-139
gb|AW282975.1|AW282975 LG1_206_D03.g1_A002 Light Grown 1 (L... 480 e-133
gb|CD235852.1|CD235852 SS1_24_D08.b1_A012 Salt-stressed see... 466 e-129
gb|CD236573.1|CD236573 SS1_35_F07.b1_A012 Salt-stressed see... 466 e-129
gb|BE352863.1|BE352863 LG1_267_G09.g1_A002 Light Grown 1 (L... 450 e-124
gb|BE352864.1|BE352864 LG1_267_G10.g1_A002 Light Grown 1 (L... 450 e-124
gb|AW676674.1|AW676674 DG1_13_H08.g1_A002 Dark Grown 1 (DG1... 428 e-118
gb|CX621250.1|CX621250 GABR1_57_A12.b1_A002 GA- or brassino... 426 e-117
gb|AW286800.2|AW286800 LG1_206_F03.b1_A002 Light Grown 1 (L... 422 e-116
gb|AW286780.2|AW286780 LG1_206_D03.b1_A002 Light Grown 1 (L... 416 e-114
gb|CW368566.1|CW368566 fsbb001f042j11k0 Sorghum methylation... 379 e-103
gb|BE356684.1|BE356684 DG1_12_C08.b1_A002 Dark Grown 1 (DG1... 373 e-101
gb|AW286094.2|AW286094 LG1_261_C11.b1_A002 Light Grown 1 (L... 367 2e-099
gb|BE367582.1|BE367582 PI1_9_H05.b1_A002 Pathogen induced 1... 363 3e-098
gb|AW286797.2|AW286797 LG1_206_E11.b1_A002 Light Grown 1 (L... 357 2e-096
gb|BE367581.1|BE367581 PI1_9_H06.b1_A002 Pathogen induced 1... 303 2e-080
gb|BE125160.1|BE125160 DG1_13_H08.b1_A002 Dark Grown 1 (DG1... 297 1e-078
gb|CL164386.1|CL164386 104_358_10807871_116_31815_239 Sorgh... 293 2e-077
gb|BE357377.1|BE357377 DG1_15_B01.b2_A002 Dark Grown 1 (DG1... 194 1e-047
gb|BE597408.1|BE597408 PI1_69_B10.b1_A002 Pathogen induced ... 170 2e-040
gb|CL181052.1|CL181052 104_391_10896478_116_31928_238 Sorgh... 147 3e-033
gb|BE359676.1|BE359676 DG1_56_H08.b2_A002 Dark Grown 1 (DG1... 147 3e-033
gb|BE361513.1|BE361513 DG1_81_C11.b1_A002 Dark Grown 1 (DG1... 147 3e-033
gb|CD225020.1|CD225020 CCC1_37_A05.g1_A007 Callus culture/c... 147 3e-033
gb|BG159192.1|BG159192 RHIZ2_27_D08.b1_A003 Rhizome2 (RHIZ2... 139 7e-031
gb|BG488141.1|BG488141 RHIZ2_60_A07.b1_A003 Rhizome2 (RHIZ2... 139 7e-031
gb|BG488213.1|BG488213 RHIZ2_60_H06.b1_A003 Rhizome2 (RHIZ2... 139 7e-031
gb|CL197332.1|CL197332 104_424_10943679_116_32337_060 Sorgh... 133 4e-029
gb|CW038953.1|CW038953 104_271_10505213_115_30388 Sorghum m... 133 4e-029
gb|CW304769.1|CW304769 104_789_11465956_148_35706_002 Sorgh... 133 4e-029
gb|BE356459.1|BE356459 DG1_125_C07.b1_A002 Dark Grown 1 (DG... 133 4e-029
gb|BE593489.1|BE593489 WS1_98_E03.b1_A002 Water-stressed 1 ... 133 4e-029
gb|CN149618.1|CN149618 WOUND1_63_H04.g1_A002 Wounded leaves... 133 4e-029
gb|CD211809.1|CD211809 HS1_64_B07.g1_A012 Heat-shocked seed... 131 2e-028
gb|CD213565.1|CD213565 HS1_41_D06.g1_A012 Heat-shocked seed... 131 2e-028
gb|BE357742.1|BE357742 DG1_22_E09.b1_A002 Dark Grown 1 (DG1... 125 1e-026
gb|BG947120.1|BG947120 IP1_2_G11.b1_A002 Immature pannicle ... 123 4e-026
gb|CD211843.1|CD211843 HS1_64_D02.g1_A012 Heat-shocked seed... 123 4e-026
gb|BE356437.1|BE356437 DG1_125_G03.b1_A002 Dark Grown 1 (DG... 119 6e-025
gb|CN131411.1|CN131411 RHOH1_47_H10.g1_A002 Acid- and alkal... 119 6e-025
gb|BE354986.1|BE354986 DG1_10_F05.b1_A002 Dark Grown 1 (DG1... 117 3e-024
gb|BE355343.1|BE355343 DG1_114_G02.b1_A002 Dark Grown 1 (DG... 117 3e-024
gb|BE355421.1|BE355421 DG1_114_G02.b2_A002 Dark Grown 1 (DG... 117 3e-024
gb|BE356455.1|BE356455 DG1_125_D07.b1_A002 Dark Grown 1 (DG... 117 3e-024
gb|BE363097.1|BE363097 DG1_9_H02.b1_A002 Dark Grown 1 (DG1)... 117 3e-024
gb|BG933512.1|BG933512 WS1_4_C09.b1_A002 Water-stressed 1 (... 117 3e-024
gb|BI075904.1|BI075904 IP1_22_G09.b1_A002 Immature pannicle... 115 1e-023
gb|CF427643.1|CF427643 PH1_16_E07.g1_A002 Phosphorous-defic... 115 1e-023
gb|BI211382.1|BI211382 IP1_60_A09.b1_A002 Immature pannicle... 113 4e-023
gb|CL177479.1|CL177479 104_384_10893857_116_31916_305 Sorgh... 109 6e-022
gb|CW044997.1|CW044997 104_281_10509293_114_30236 Sorghum m... 109 6e-022
gb|BG559301.1|BG559301 RHIZ2_53_B08.b1_A003 Rhizome2 (RHIZ2... 109 6e-022
gb|BG649723.1|BG649723 RHIZ2_82_G10.b1_A003 Rhizome2 (RHIZ2... 109 6e-022
gb|CD225628.1|CD225628 CCC1_40_G02.g1_A007 Callus culture/c... 109 6e-022
gb|CL157537.1|CL157537 104_345_10783651_116_31478_211 Sorgh... 105 1e-020
gb|BF704669.1|BF704669 FM1_50_A06.b1_A003 Floral-Induced Me... 101 1e-019
gb|BG558372.1|BG558372 RHIZ2_66_E05.b1_A003 Rhizome2 (RHIZ2... 101 1e-019
gb|CD204106.1|CD204106 HS1_3_A03.g1_A012 Heat-shocked seedl... 100 6e-019
gb|CN139539.1|CN139539 OX1_22_E01.g1_A002 Oxidatively-stres... 100 6e-019
gb|CN125727.1|CN125727 RHOH1_12_H07.g1_A002 Acid- and alkal... 98 2e-018
gb|CL164385.1|CL164385 104_358_10807871_114_31814_239 Sorgh... 94 4e-017
gb|BE362201.1|BE362201 DG1_85_C05.b1_A002 Dark Grown 1 (DG1... 94 4e-017
gb|BG050303.1|BG050303 FM1_53_C07.b1_A003 Floral-Induced Me... 94 4e-017
gb|BE357579.1|BE357579 DG1_21_E10.b1_A002 Dark Grown 1 (DG1... 92 1e-016
gb|CW411916.1|CW411916 fsbb001f107e19k0 Sorghum methylation... 86 9e-015
gb|BG103002.1|BG103002 RHIZ2_35_H06.b1_A003 Rhizome2 (RHIZ2... 86 9e-015
gb|BG558405.1|BG558405 RHIZ2_67_A09.b1_A003 Rhizome2 (RHIZ2... 86 9e-015
gb|CW370183.1|CW370183 fsbb001f044p12k0 Sorghum methylation... 80 5e-013
gb|CW396733.1|CW396733 fsbb001f085f03f0 Sorghum methylation... 80 5e-013
gb|CW410294.1|CW410294 fsbb001f104p18f0 Sorghum methylation... 78 2e-012
gb|BF586634.1|BF586634 FM1_29_F11.b1_A003 Floral-Induced Me... 78 2e-012
gb|BI075202.1|BI075202 IP1_17_D05.b1_A002 Immature pannicle... 78 2e-012
gb|CD211845.1|CD211845 HS1_64_C08.g1_A012 Heat-shocked seed... 78 2e-012
gb|CD213004.1|CD213004 HS1_17_C02.g1_A012 Heat-shocked seed... 78 2e-012
gb|CD225014.1|CD225014 CCC1_37_D01.g1_A007 Callus culture/c... 78 2e-012
gb|CD229214.1|CD229214 CCC1_13_B02.g1_A007 Callus culture/c... 78 2e-012
gb|CF427438.1|CF427438 PH1_1_H06.g1_A002 Phosphorous-defici... 78 2e-012
gb|CF433664.1|CF433664 NIT1_28_D06.g1_A002 Nitrogen-deficie... 78 2e-012
gb|CN136100.1|CN136100 OX1_40_F12.g1_A002 Oxidatively-stres... 78 2e-012
gb|BG102401.1|BG102401 RHIZ2_23_C06.b1_A003 Rhizome2 (RHIZ2... 76 9e-012
gb|BE362052.1|BE362052 DG1_84_F03.b1_A002 Dark Grown 1 (DG1... 74 3e-011
gb|CD235748.1|CD235748 SS1_37_G03.g1_A012 Salt-stressed see... 74 3e-011
gb|CD235780.1|CD235780 SS1_37_G02.g1_A012 Salt-stressed see... 74 3e-011
gb|CX616548.1|CX616548 GABR1_28_C07.g1_A002 GA- or brassino... 74 3e-011
gb|CL190655.1|CL190655 104_409_10906227_116_32496_016 Sorgh... 72 1e-010
gb|CW128842.1|CW128842 104_510_11114239_116_34758_022 Sorgh... 72 1e-010
gb|CW436489.1|CW436489 fsbb001f153b24f0 Sorghum methylation... 72 1e-010
gb|CW497689.1|CW497689 fsbb001f290j02k0 Sorghum methylation... 72 1e-010
gb|AW923588.1|AW923588 DG1_56_H08.b1_A002 Dark Grown 1 (DG1... 72 1e-010
gb|CL171166.1|CL171166 104_372_10889229_116_31779_285 Sorgh... 70 5e-010
gb|CL171167.1|CL171167 104_372_10889229_148_31778_285 Sorgh... 70 5e-010
gb|CL183819.1|CL183819 104_396_10898428_114_31923_268 Sorgh... 70 5e-010
gb|CW178657.1|CW178657 104_592_11159684_116_36620_072 Sorgh... 70 5e-010
gb|CW183688.1|CW183688 104_599_11164747_148_36676_070 Sorgh... 70 5e-010
gb|CW215159.1|CW215159 104_647_11194395_116_37165_010 Sorgh... 70 5e-010
gb|CW369263.1|CW369263 fsbb001f043j14f0 Sorghum methylation... 70 5e-010
gb|CW417037.1|CW417037 fsbb001f117n19f0 Sorghum methylation... 70 5e-010
gb|BF422186.1|BF422186 FM1_12_H05.b1_A003 Floral-Induced Me... 70 5e-010
gb|CN136666.1|CN136666 OX1_44_D01.g1_A002 Oxidatively-stres... 70 5e-010
gb|CN141940.1|CN141940 WOUND1_2_G05.g1_A002 Wounded leaves ... 70 5e-010
gb|CD208462.1|CD208462 HS1_37_A05.g1_A012 Heat-shocked seed... 66 8e-009
gb|CD224210.1|CD224210 CCC1_32_E03.g1_A007 Callus culture/c... 66 8e-009
gb|CL154551.1|CL154551 104_339_10781491_116_31372_355 Sorgh... 64 3e-008
gb|CW032387.1|CW032387 104_261_10501349_114_30363 Sorghum m... 64 3e-008
gb|CW171233.1|CW171233 104_581_11155631_116_36521_082 Sorgh... 64 3e-008
gb|CW183379.1|CW183379 104_599_11164586_148_36677_011 Sorgh... 64 3e-008
gb|CW360230.1|CW360230 fsbb001f028d16f0 Sorghum methylation... 64 3e-008
gb|CW465154.1|CW465154 fsbb001f215m11f0 Sorghum methylation... 64 3e-008
gb|BF656221.1|BF656221 FM1_44_E06.b1_A003 Floral-Induced Me... 64 3e-008
gb|BG487539.1|BG487539 EM1_67_C06.b1_A002 Embryo 1 (EM1) So... 64 3e-008
gb|BZ779790.1|BZ779790 ii34f04.b1 WGS-SbicolorF (DH5a methy... 62 1e-007
gb|CW045087.1|CW045087 104_281_10509350_114_30237 Sorghum m... 62 1e-007
gb|CW175933.1|CW175933 104_588_11158217_116_36578_069 Sorgh... 62 1e-007
gb|CW221899.1|CW221899 104_657_11202092_116_37451_078 Sorgh... 62 1e-007
gb|CW360174.1|CW360174 fsbb001f028c08k0 Sorghum methylation... 62 1e-007
gb|CW375801.1|CW375801 fsbb001f053f12f0 Sorghum methylation... 62 1e-007
gb|CW382994.1|CW382994 fsbb001f065e16k0 Sorghum methylation... 62 1e-007
gb|CW489176.1|CW489176 fsbb001f265p08f0 Sorghum methylation... 62 1e-007
gb|CW493542.1|CW493542 fsbb001f284f17k0 Sorghum methylation... 62 1e-007
gb|BE125649.1|BE125649 DG1_54_F10.b1_A002 Dark Grown 1 (DG1... 62 1e-007
gb|BE356553.1|BE356553 DG1_126_C05.b1_A002 Dark Grown 1 (DG... 62 1e-007
gb|BG355958.2|BG355958 EM1_18_F11.g1_A002 Embryo 1 (EM1) So... 62 1e-007
gb|CW163521.1|CW163521 104_571_11151505_148_36454_011 Sorgh... 60 5e-007
gb|CW169284.1|CW169284 104_579_11154593_116_36499_075 Sorgh... 56 8e-006
gb|CW169285.1|CW169285 104_579_11154593_148_36500_075 Sorgh... 56 8e-006
gb|CW360173.1|CW360173 fsbb001f028c08f0 Sorghum methylation... 56 8e-006
gb|CW370182.1|CW370182 fsbb001f044p12f0 Sorghum methylation... 56 8e-006
gb|CW396734.1|CW396734 fsbb001f085f03k0 Sorghum methylation... 56 8e-006
gb|BG053306.1|BG053306 RHIZ2_25_G10.b1_A003 Rhizome2 (RHIZ2... 56 8e-006
gb|CW034966.1|CW034966 104_265_10502869_114_30378 Sorghum m... 54 3e-005
gb|CW053111.1|CW053111 104_293_10515781_114_30184 Sorghum m... 54 3e-005
gb|CW055609.1|CW055609 104_297_10517224_115_30173 Sorghum m... 54 3e-005
gb|CW253378.1|CW253378 104_717_11225053_116_35110_063 Sorgh... 54 3e-005
gb|CW253379.1|CW253379 104_717_11225053_148_35106_063 Sorgh... 54 3e-005
gb|CW281372.1|CW281372 104_757_11408141_116_35463_031 Sorgh... 54 3e-005
gb|CW281373.1|CW281373 104_757_11408141_148_35459_031 Sorgh... 54 3e-005
gb|BZ330106.1|BZ330106 hv90a09.b1 WGS-SbicolorF (JM107 adap... 52 1e-004
gb|CL157536.1|CL157536 104_345_10783651_114_31477_211 Sorgh... 52 1e-004
gb|CL165204.1|CL165204 104_360_10808428_116_31819_028 Sorgh... 52 1e-004
gb|CW105399.1|CW105399 104_474_11012877_116_34452_085 Sorgh... 52 1e-004
gb|CW118138.1|CW118138 104_494_11108040_148_34621_088 Sorgh... 52 1e-004
gb|CW218470.1|CW218470 104_652_11196207_148_37529_062 Sorgh... 52 1e-004
gb|CW413061.1|CW413061 fsbb001f112a10f0 Sorghum methylation... 52 1e-004
gb|CW448024.1|CW448024 fsbb001f181g24k0 Sorghum methylation... 52 1e-004
gb|AW672235.1|AW672235 LG1_358_E01.b1_A002 Light Grown 1 (L... 52 1e-004
gb|AW922582.1|AW922582 DG1_45_E11.g1_A002 Dark Grown 1 (DG1... 52 1e-004
gb|BE356646.1|BE356646 DG1_126_C05.g1_A002 Dark Grown 1 (DG... 52 1e-004
gb|BE357653.1|BE357653 DG1_21_E10.g1_A002 Dark Grown 1 (DG1... 52 1e-004
gb|BE357851.1|BE357851 DG1_22_E09.g1_A002 Dark Grown 1 (DG1... 52 1e-004
gb|BG052635.1|BG052635 RHIZ2_27_D08.g1_A003 Rhizome2 (RHIZ2... 52 1e-004
gb|BG462993.1|BG462993 EM1_46_C02.g1_A002 Embryo 1 (EM1) So... 52 1e-004
gb|BG947040.1|BG947040 IP1_2_G11.g1_A002 Immature pannicle ... 52 1e-004
gb|BI211637.1|BI211637 IP1_60_A09.g1_A002 Immature pannicle... 52 1e-004
gb|CD206211.1|CD206211 HS1_21_H12.b1_A012 Heat-shocked seed... 52 1e-004
gb|CD213475.1|CD213475 HS1_41_D06.b1_A012 Heat-shocked seed... 52 1e-004
gb|CN139453.1|CN139453 OX1_22_E01.b1_A002 Oxidatively-stres... 52 1e-004
gb|CL163417.1|CL163417 104_356_10807133_114_31810_269 Sorgh... 50 5e-004
gb|AW922698.1|AW922698 DG1_45_E11.b1_A002 Dark Grown 1 (DG1... 50 5e-004
gb|BF586913.1|BF586913 FM1_31_A07.b1_A003 Floral-Induced Me... 50 5e-004
gb|CL165468.1|CL165468 104_360_10808639_114_31818_239 Sorgh... 48 0.002
gb|CL177480.1|CL177480 104_384_10893857_148_31915_305 Sorgh... 48 0.002
gb|CL181053.1|CL181053 104_391_10896478_148_31927_238 Sorgh... 48 0.002
gb|CW022913.1|CW022913 104_162_10432131_1_30008 Sorghum met... 48 0.002
gb|CW038952.1|CW038952 104_271_10505213_114_30387 Sorghum m... 48 0.002
gb|CW138453.1|CW138453 104_528_11134704_116_34891_094 Sorgh... 48 0.002
gb|CW207390.1|CW207390 104_636_11188111_148_36969_024 Sorgh... 48 0.002
gb|CW229300.1|CW229300 104_670_11207230_148_37261_087 Sorgh... 48 0.002
gb|CW262595.1|CW262595 104_730_11230163_116_35225_044 Sorgh... 48 0.002
gb|CW262596.1|CW262596 104_730_11230163_148_35221_044 Sorgh... 48 0.002
gb|CW396805.1|CW396805 fsbb001f085g15k0 Sorghum methylation... 48 0.002
gb|CW439907.1|CW439907 fsbb001f158e17f0 Sorghum methylation... 48 0.002
gb|AW678398.1|AW678398 WS1_15_E05.g1_A002 Water-stressed 1 ... 48 0.002
gb|AW680192.1|AW680192 WS1_4_C09.g1_A002 Water-stressed 1 (... 48 0.002
gb|AW922665.1|AW922665 DG1_45_C01.b1_A002 Dark Grown 1 (DG1... 48 0.002
gb|AW923615.1|AW923615 DG1_56_H08.g1_A002 Dark Grown 1 (DG1... 48 0.002
gb|BE355170.1|BE355170 DG1_10_F05.g1_A002 Dark Grown 1 (DG1... 48 0.002
gb|BE355488.1|BE355488 DG1_114_G02.g1_A002 Dark Grown 1 (DG... 48 0.002
gb|BE356481.1|BE356481 DG1_125_C07.g1_A002 Dark Grown 1 (DG... 48 0.002
gb|BE356504.1|BE356504 DG1_125_G03.g1_A002 Dark Grown 1 (DG... 48 0.002
gb|BE359733.1|BE359733 DG1_56_H08.g2_A002 Dark Grown 1 (DG1... 48 0.002
gb|BE361712.1|BE361712 DG1_81_C11.g1_A002 Dark Grown 1 (DG1... 48 0.002
gb|BE363177.1|BE363177 DG1_9_H02.g1_A002 Dark Grown 1 (DG1)... 48 0.002
gb|BE593178.1|BE593178 WS1_98_E03.g1_A002 Water-stressed 1 ... 48 0.002
gb|BE918783.1|BE918783 OV1_4_H11.b1_A002 Ovary 1 (OV1) Sorg... 48 0.002
gb|BG487912.1|BG487912 RHIZ2_60_H06.g1_A003 Rhizome2 (RHIZ2... 48 0.002
gb|BG558117.1|BG558117 RHIZ2_67_A09.g1_A003 Rhizome2 (RHIZ2... 48 0.002
gb|BG605888.1|BG605888 RHIZ2_82_G10.g1_A003 Rhizome2 (RHIZ2... 48 0.002
gb|CD224909.1|CD224909 CCC1_37_A05.b1_A007 Callus culture/c... 48 0.002
gb|CD225604.1|CD225604 CCC1_40_G02.b1_A007 Callus culture/c... 48 0.002
gb|CD227391.1|CD227391 CCC1_51_H09.b1_A007 Callus culture/c... 48 0.002
gb|CD227647.1|CD227647 CCC1_52_D04.g1_A007 Callus culture/c... 48 0.002
gb|CF427555.1|CF427555 PH1_16_E07.b1_A002 Phosphorous-defic... 48 0.002
gb|CN131344.1|CN131344 RHOH1_47_H10.b1_A002 Acid- and alkal... 48 0.002
gb|DN552493.1|DN552493 pSHR-RT-A-H1_C07_C085 pSHR Sorghum h... 48 0.002
gb|CL192863.1|CL192863 104_416_10940545_114_32265_013 Sorgh... 46 0.008
gb|CW086745.1|CW086745 104_430_10947179_116_32570_034 Sorgh... 46 0.008
gb|CW102735.1|CW102735 104_471_11011503_116_34426_062 Sorgh... 46 0.008
gb|CW279650.1|CW279650 104_754_11407191_116_35435_056 Sorgh... 46 0.008
gb|CW279651.1|CW279651 104_754_11407191_148_35439_056 Sorgh... 46 0.008
gb|CW305737.1|CW305737 104_791_11466467_148_36273_046 Sorgh... 46 0.008
gb|CW404597.1|CW404597 fsbb001f096m21k0 Sorghum methylation... 46 0.008
gb|CW486084.1|CW486084 fsbb001f249c15k0 Sorghum methylation... 46 0.008
gb|BE354980.1|BE354980 DG1_10_F11.b1_A002 Dark Grown 1 (DG1... 46 0.008
gb|BE358216.1|BE358216 DG1_26_F09.b2_A002 Dark Grown 1 (DG1... 46 0.008
gb|BE359862.1|BE359862 DG1_58_G02.b2_A002 Dark Grown 1 (DG1... 46 0.008
gb|BG047807.1|BG047807 OV1_28_A10.b1_A002 Ovary 1 (OV1) Sor... 46 0.008
gb|BM317539.1|BM317539 LG1_332_H05.b9_A002 Light Grown 1 (L... 46 0.008
gb|CD236044.1|CD236044 SS1_25_C10.g1_A012 Salt-stressed see... 46 0.008
gb|CD463605.1|CD463605 ETH1_45_D02.g1_A002 Ethylene-treated... 46 0.008
gb|CF429999.1|CF429999 PH1_25_F09.g1_A002 Phosphorous-defic... 46 0.008
gb|CF480594.1|CF480594 POL1_66_E08.g1_A002 Pollen Sorghum b... 46 0.008
gb|CN131212.1|CN131212 RHOH1_46_C04.g1_A002 Acid- and alkal... 46 0.008
gb|CN144004.1|CN144004 WOUND1_19_D07.g1_A002 Wounded leaves... 46 0.008
gb|CX609287.1|CX609287 ANR1_11_F09.g1_A002 Anaerobic roots ... 46 0.008
gb|CX609406.1|CX609406 ANR1_12_B05.g1_A002 Anaerobic roots ... 46 0.008
gb|CX616082.1|CX616082 GABR1_25_F01.g1_A002 GA- or brassino... 46 0.008
gb|CL163199.1|CL163199 104_356_10806974_114_31810_110 Sorgh... 44 0.030
gb|CW021748.1|CW021748 104_160_10431441_1_30004 Sorghum met... 44 0.030
gb|CW030005.1|CW030005 104_257_10499999_116_30402 Sorghum m... 44 0.030
gb|CW036877.1|CW036877 104_268_10504022_114_30381 Sorghum m... 44 0.030
gb|CW036878.1|CW036878 104_268_10504022_115_30382 Sorghum m... 44 0.030
gb|CW101494.1|CW101494 104_469_11004677_116_34404_025 Sorgh... 44 0.030
gb|CW101495.1|CW101495 104_469_11004677_148_34408_025 Sorgh... 44 0.030
gb|CW105400.1|CW105400 104_474_11012877_148_34448_085 Sorgh... 44 0.030
gb|CW124135.1|CW124135 104_503_11111604_148_34694_036 Sorgh... 44 0.030
gb|CW143823.1|CW143823 104_535_11137619_116_34954_036 Sorgh... 44 0.030
gb|CW143824.1|CW143824 104_535_11137619_148_34958_036 Sorgh... 44 0.030
gb|CW166039.1|CW166039 104_574_11152832_116_36481_022 Sorgh... 44 0.030
gb|CW201321.1|CW201321 104_627_11184511_116_37109_030 Sorgh... 44 0.030
gb|CW201322.1|CW201322 104_627_11184511_148_37110_030 Sorgh... 44 0.030
gb|CW205284.1|CW205284 104_633_11186988_148_36927_038 Sorgh... 44 0.030
gb|CW215341.1|CW215341 104_647_11194488_148_37163_086 Sorgh... 44 0.030
gb|CW289114.1|CW289114 104_767_11412305_116_35541_065 Sorgh... 44 0.030
gb|CW296129.1|CW296129 104_777_11461328_116_35623_020 Sorgh... 44 0.030
gb|CW296130.1|CW296130 104_777_11461328_148_35627_020 Sorgh... 44 0.030
gb|CW325952.1|CW325952 104_821_11477963_116_36062_046 Sorgh... 44 0.030
gb|CW406601.1|CW406601 fsbb001f099l02k0 Sorghum methylation... 44 0.030
gb|BE362164.1|BE362164 DG1_84_F03.g1_A002 Dark Grown 1 (DG1... 44 0.030
gb|BF422100.1|BF422100 FM1_12_H05.g1_A003 Floral-Induced Me... 44 0.030
gb|BF656227.1|BF656227 FM1_44_E12.b1_A003 Floral-Induced Me... 44 0.030
gb|CB925465.1|CB925465 ABA1_33_B05.g1_A012 Abscisic acid-tr... 44 0.030
gb|CD204008.1|CD204008 HS1_3_F11.b1_A012 Heat-shocked seedl... 44 0.030
gb|CD207344.1|CD207344 HS1_65_F03.b1_A012 Heat-shocked seed... 44 0.030
gb|CD235680.1|CD235680 SS1_37_G02.b1_A012 Salt-stressed see... 44 0.030
gb|CD428137.1|CD428137 ETH1_32_H05.g1_A002 Ethylene-treated... 44 0.030
gb|CX610800.1|CX610800 ANR1_20_H05.g1_A002 Anaerobic roots ... 44 0.030
gb|BZ330107.1|BZ330107 hv90a09.g1 WGS-SbicolorF (JM107 adap... 42 0.12
gb|BZ333054.1|BZ333054 hx32e04.b1 WGS-SbicolorF (JM107 adap... 42 0.12
gb|BZ336934.1|BZ336934 ia84b04.b1 WGS-SbicolorF (JM107 adap... 42 0.12
gb|CL147987.1|CL147987 104_327_10592767_148_31780_275 Sorgh... 42 0.12
gb|CL163760.1|CL163760 104_357_10807385_114_31812_137 Sorgh... 42 0.12
gb|CW041873.1|CW041873 104_275_10506804_115_30285 Sorghum m... 42 0.12
gb|CW042544.1|CW042544 104_276_10507157_114_30482 Sorghum m... 42 0.12
gb|CW104591.1|CW104591 104_473_11012513_116_34442_067 Sorgh... 42 0.12
gb|CW117366.1|CW117366 104_493_11107618_148_34613_041 Sorgh... 42 0.12
gb|CW171122.1|CW171122 104_581_11155572_148_36523_036 Sorgh... 42 0.12
gb|CW173021.1|CW173021 104_584_11156617_148_36546_007 Sorgh... 42 0.12
gb|CW183415.1|CW183415 104_599_11164604_148_36677_076 Sorgh... 42 0.12
gb|CW196049.1|CW196049 104_619_11180962_148_36804_033 Sorgh... 42 0.12
gb|CW217514.1|CW217514 104_650_11195695_116_37133_020 Sorgh... 42 0.12
gb|CW230940.1|CW230940 104_680_11210862_148_37340_031 Sorgh... 42 0.12
gb|CW238987.1|CW238987 104_697_11217412_116_37422_014 Sorgh... 42 0.12
gb|CW303354.1|CW303354 104_787_11465194_148_35671_033 Sorgh... 42 0.12
gb|CW354441.1|CW354441 fsbb001f017k11k0 Sorghum methylation... 42 0.12
gb|CW393419.1|CW393419 fsbb001f080h11k0 Sorghum methylation... 42 0.12
gb|CW399817.1|CW399817 fsbb001f089m24k0 Sorghum methylation... 42 0.12
gb|CW400058.1|CW400058 fsbb001f090d04f0 Sorghum methylation... 42 0.12
gb|CW421683.1|CW421683 fsbb001f130j20k0 Sorghum methylation... 42 0.12
gb|CW428703.1|CW428703 fsbb001f141j01f0 Sorghum methylation... 42 0.12
gb|CW447555.1|CW447555 fsbb001f180l19f0 Sorghum methylation... 42 0.12
gb|CW448902.1|CW448902 fsbb001f182m02f0 Sorghum methylation... 42 0.12
gb|CW448923.1|CW448923 fsbb001f182m14f0 Sorghum methylation... 42 0.12
gb|CW449573.1|CW449573 fsbb001f183m14k0 Sorghum methylation... 42 0.12
gb|BF655910.1|BF655910 FM1_42_D02.g1_A003 Floral-Induced Me... 42 0.12
gb|BG102815.1|BG102815 RHIZ2_33_G06.b1_A003 Rhizome2 (RHIZ2... 42 0.12
gb|BG158695.1|BG158695 RHIZ2_44_A10.g1_A003 Rhizome2 (RHIZ2... 42 0.12
gb|BG487842.1|BG487842 RHIZ2_60_A07.g1_A003 Rhizome2 (RHIZ2... 42 0.12
gb|BG558983.1|BG558983 RHIZ2_53_B08.g1_A003 Rhizome2 (RHIZ2... 42 0.12
gb|BG560213.1|BG560213 RHIZ2_73_A07.b1_A003 Rhizome2 (RHIZ2... 42 0.12
gb|BG560670.1|BG560670 RHIZ2_58_C08.b1_A003 Rhizome2 (RHIZ2... 42 0.12
gb|BG355724.2|BG355724 EM1_18_F11.b1_A002 Embryo 1 (EM1) So... 42 0.12
gb|CD213998.1|CD213998 HS1_69_F06.g1_A012 Heat-shocked seed... 42 0.12
gb|CD231870.1|CD231870 SS1_30_G08.g1_A012 Salt-stressed see... 42 0.12
gb|CD236653.1|CD236653 SS1_35_H04.g1_A012 Salt-stressed see... 42 0.12
gb|CD429366.1|CD429366 ETH1_4_E12.b1_A002 Ethylene-treated ... 42 0.12
gb|CD429502.1|CD429502 ETH1_4_E12.g1_A002 Ethylene-treated ... 42 0.12
gb|BZ332552.1|BZ332552 hx28h10.b1 WGS-SbicolorF (JM107 adap... 40 0.47
gb|BZ332813.1|BZ332813 hx30g10.g1 WGS-SbicolorF (JM107 adap... 40 0.47
gb|BZ340667.1|BZ340667 ic40c05.g1 WGS-SbicolorF (JM107 adap... 40 0.47
gb|BZ349361.1|BZ349361 hq90g02.g1 WGS-SbicolorF (JM107 adap... 40 0.47
gb|BZ779779.1|BZ779779 ii34e07.g1 WGS-SbicolorF (DH5a methy... 40 0.47
gb|BZ780113.1|BZ780113 ii37d04.b1 WGS-SbicolorF (DH5a methy... 40 0.47
gb|CL153280.1|CL153280 104_337_10780608_114_31367_240 Sorgh... 40 0.47
gb|CL170475.1|CL170475 104_371_10813842_148_31790_162 Sorgh... 40 0.47
gb|CL189692.1|CL189692 104_407_10905550_116_32482_093 Sorgh... 40 0.47
gb|CW029495.1|CW029495 104_257_10499708_116_30402 Sorghum m... 40 0.47
gb|CW030004.1|CW030004 104_257_10499999_114_30401 Sorghum m... 40 0.47
gb|CW035204.1|CW035204 104_265_10503022_114_30378 Sorghum m... 40 0.47
gb|CW035205.1|CW035205 104_265_10503022_115_30379 Sorghum m... 40 0.47
gb|CW036710.1|CW036710 104_268_10503927_115_30382 Sorghum m... 40 0.47
gb|CW039670.1|CW039670 104_272_10505630_115_30390 Sorghum m... 40 0.47
gb|CW087236.1|CW087236 104_431_10947492_114_33027_038 Sorgh... 40 0.47
gb|CW130174.1|CW130174 104_512_11114967_116_34770_056 Sorgh... 40 0.47
gb|CW174344.1|CW174344 104_586_11157351_116_36562_058 Sorgh... 40 0.47
gb|CW202203.1|CW202203 104_628_11184970_116_37087_041 Sorgh... 40 0.47
gb|CW224232.1|CW224232 104_660_11203340_116_37447_074 Sorgh... 40 0.47
gb|CW235475.1|CW235475 104_690_11215000_116_37410_052 Sorgh... 40 0.47
gb|CW235476.1|CW235476 104_690_11215000_148_37414_052 Sorgh... 40 0.47
gb|CW239869.1|CW239869 104_698_11217893_116_37504_025 Sorgh... 40 0.47
gb|CW242479.1|CW242479 104_702_11219364_148_37565_046 Sorgh... 40 0.47
gb|CW248616.1|CW248616 104_710_11222397_116_35039_095 Sorgh... 40 0.47
gb|CW292511.1|CW292511 104_772_11414127_148_35581_054 Sorgh... 40 0.47
gb|CW306937.1|CW306937 104_792_11467109_116_35709_017 Sorgh... 40 0.47
gb|CW313201.1|CW313201 104_803_11471162_148_35791_009 Sorgh... 40 0.47
gb|CW313569.1|CW313569 104_803_11471353_148_35790_001 Sorgh... 40 0.47
gb|CW314198.1|CW314198 104_804_11471698_148_35799_035 Sorgh... 40 0.47
gb|CW323500.1|CW323500 104_817_11476663_148_35956_020 Sorgh... 40 0.47
gb|CW325953.1|CW325953 104_821_11477963_148_36063_046 Sorgh... 40 0.47
gb|CW397557.1|CW397557 fsbb001f086j08f0 Sorghum methylation... 40 0.47
gb|CW424637.1|CW424637 fsbb001f135b02f0 Sorghum methylation... 40 0.47
gb|CW427577.1|CW427577 fsbb001f139k11f0 Sorghum methylation... 40 0.47
gb|CW437413.1|CW437413 fsbb001f154i09f0 Sorghum methylation... 40 0.47
gb|CW451375.1|CW451375 fsbb001f191g19f0 Sorghum methylation... 40 0.47
gb|CW457603.1|CW457603 fsbb001f203h22k0 Sorghum methylation... 40 0.47
gb|CW461819.1|CW461819 fsbb001f209k16k0 Sorghum methylation... 40 0.47
gb|CW469002.1|CW469002 fsbb001f221h22f0 Sorghum methylation... 40 0.47
gb|CW474188.1|CW474188 fsbb001f229o13k0 Sorghum methylation... 40 0.47
gb|CW478727.1|CW478727 fsbb001f236m01k0 Sorghum methylation... 40 0.47
gb|CW486839.1|CW486839 fsbb001f252f16f0 Sorghum methylation... 40 0.47
gb|CW500866.1|CW500866 fsbb001f296g11f0 Sorghum methylation... 40 0.47
gb|AW283870.1|AW283870 LG1_260_H01.g1_A002 Light Grown 1 (L... 40 0.47
gb|AW287525.2|AW287525 LG1_242_B09.b1_A002 Light Grown 1 (L... 40 0.47
gb|AW287575.2|AW287575 LG1_242_G10.b1_A002 Light Grown 1 (L... 40 0.47
gb|AW564403.1|AW564403 LG1_292_B12.b1_A002 Light Grown 1 (L... 40 0.47
gb|AW745293.1|AW745293 LG1_387_H08.g1_A002 Light Grown 1 (L... 40 0.47
gb|AW922606.1|AW922606 DG1_46_D12.b1_A002 Dark Grown 1 (DG1... 40 0.47
gb|BE125256.1|BE125256 DG1_18_D01.b1_A002 Dark Grown 1 (DG1... 40 0.47
gb|BE361634.1|BE361634 DG1_81_C01.b1_A002 Dark Grown 1 (DG1... 40 0.47
gb|BE918392.1|BE918392 OV1_3_A07.g1_A002 Ovary 1 (OV1) Sorg... 40 0.47
gb|BF422262.1|BF422262 FM1_13_B11.b1_A003 Floral-Induced Me... 40 0.47
gb|BG050374.1|BG050374 FM1_53_C07.g1_A003 Floral-Induced Me... 40 0.47
gb|BG357198.1|BG357198 OV2_11_A05.b1_A002 Ovary 2 (OV2) Sor... 40 0.47
gb|BG465900.1|BG465900 RHIZ2_46_A05.g1_A003 Rhizome2 (RHIZ2... 40 0.47
gb|BG556223.1|BG556223 EM1_67_C06.g1_A002 Embryo 1 (EM1) So... 40 0.47
gb|BG557476.1|BG557476 EM1_44_F08.b1_A002 Embryo 1 (EM1) So... 40 0.47
gb|BG559972.1|BG559972 RHIZ2_75_H09.g1_A003 Rhizome2 (RHIZ2... 40 0.47
gb|BG560219.1|BG560219 RHIZ2_71_E10.b1_A003 Rhizome2 (RHIZ2... 40 0.47
gb|BG946793.1|BG946793 LG1_330_D07.b1_A002 Light Grown 1 (L... 40 0.47
gb|BG948833.1|BG948833 LG1_266_B09.b1_A002 Light Grown 1 (L... 40 0.47
gb|BI245717.1|BI245717 IP1_63_D01.b1_A002 Immature pannicle... 40 0.47
gb|CD226724.1|CD226724 CCC1_47_H10.g1_A007 Callus culture/c... 40 0.47
gb|CD235723.1|CD235723 SS1_37_G03.b1_A012 Salt-stressed see... 40 0.47
gb|CF428925.1|CF428925 PH1_18_D09.g1_A002 Phosphorous-defic... 40 0.47
gb|CF431052.1|CF431052 NIT1_4_H09.g1_A002 Nitrogen-deficien... 40 0.47
gb|CN140043.1|CN140043 OX1_33_E06.g1_A002 Oxidatively-stres... 40 0.47
gb|CX616434.1|CX616434 GABR1_27_H04.g1_A002 GA- or brassino... 40 0.47
gb|CX616545.1|CX616545 GABR1_28_C04.g1_A002 GA- or brassino... 40 0.47
>gb|CW111253.1|CW111253 104_484_11104205_148_34527_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11104205, DNA
sequence
Length = 660
Score = 793 bits (400), Expect = 0.0
Identities = 596/661 (90%), Gaps = 2/661 (0%)
Strand = Plus / Minus
Query: 294 ccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtcccggg 353
|||||||||| |||||||||||||||||||||||||||||||||| ||||| || || ||
Sbjct: 660 ccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggtgccagg 601
Query: 354 ggactccgccggcaccgtcgccaccttctatctttcgtcgcagggtt-cgcagcacgacg 412
||||||||||||||||| |||||||||| || || |||||||| ||| |||||||
Sbjct: 600 caactccgccggcaccgtcaccaccttctacctctcctcgcagggcagcgcc-cacgacg 542
Query: 413 agatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacacgaacg 472
||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| ||||
Sbjct: 541 agatcgacttcgagttcctcggcaacgcgagcggagagccctacacggtgcacaccaacg 482
Query: 473 tgtacagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccccacgg 532
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 481 tgtacagccaggggaaaggcgggcgggagcagcagttccggatgtggttcgaccccaccg 422
Query: 533 cggccttccacgcctactccgtgctgtggaaccccgcccacgtcgtcttctacgtggacg 592
||| ||||||||||||||| ||||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 421 cggacttccacgcctactcggtgctctggaacccttcccacatcgtcttctacgtcgacg 362
Query: 593 gcgtccccatccgggagttccggcgccgcggcgacgggaccgtgccgttcccgacgtcgc 652
||||||||||||| |||||||| ||||| |||||| | |||||||||||||||||||
Sbjct: 361 gcgtccccatccgcgagttccgccgccgaaacgacggcgcggtgccgttcccgacgtcgc 302
Query: 653 agccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgcannnnnnnc 712
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 301 agccgatgcgggtgtacgccagcgtgtgggacgccgaggagtgggccacgcagggcgggc 242
Query: 713 gcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgtaccgcgggtacgccgcca 772
| ||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 241 gtgtcaagacggactggtccaaggcgcccttcgtcgcgtcgtaccaggggtacgccgccg 182
Query: 773 ccgggtgcaccgcgccggacgccgccgcctgcgcgcgctccaacggcgcatggatgtcgc 832
|||| ||||||||||| ||||||||||| ||||| | ||||||||||| ||||||||||
Sbjct: 181 ccggctgcaccgcgcccgacgccgccgcgtgcgccaggtccaacggcgcctggatgtcgc 122
Query: 833 aggagctcgacagcgccggccaggagcagctccgccgggcgcaggccagctacatgatct 892
|||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 121 aggagctcgacagcgccgcgcaggggcagctccgccgggcgcaggccagctacatgatct 62
Query: 893 acaactactgcaccgataagtaccggttcccgcagggcccgccgcccgagtgctcgtcgc 952
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 61 acaactactgcaccgataagtaccgcttcccgcagggaccgccgcccgagtgctcgtcgc 2
Query: 953 c 953
|
Sbjct: 1 c 1
>gb|CN146506.1|CN146506 WOUND1_41_D07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_41_D07_A002 5', mRNA sequence
Length = 770
Score = 706 bits (356), Expect = 0.0
Identities = 586/662 (88%), Gaps = 11/662 (1%)
Strand = Plus / Plus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 113 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 172
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 173 gtcgc---cggcggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 229
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 230 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 289
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 290 gggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggtg 349
Query: 349 ccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcagggtt-cgcagca 407
|| || ||||||||||||||||| |||||||||| || || |||||||| ||| ||
Sbjct: 350 ccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggcagcgcc-ca 408
Query: 408 cgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacac 467
|||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 409 cgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacggtgcacac 468
Query: 468 gaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccc 527
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 469 caacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtggttcgaccc 528
Query: 528 cacggcggccttccacgcctactccgtgctgtggaaccccgcccacgtcgtcttctacgt 587
||| |||| ||||||||||||||| ||||| |||||||| ||||| |||||||||||||
Sbjct: 529 caccgcggacttccacgcctactcggtgctctggaacccttcccacatcgtcttctacgt 588
Query: 588 ggacggcgtccccatccgggagttccggcgccgcggcgacgggaccgtgccgttcccgac 647
||||||||||||||||| |||||||| ||||| |||||| | ||||||||||||||
Sbjct: 589 cgacggcgtccccatccgcgagttccgccgccgaaacgacggcgcggtgccgttcccgac 648
Query: 648 gtcgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgcannn 707
||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 649 gtcacagccgatgcgggtgtacgccagcgtgtgggacgccgaggagtgggccacgcaggg 708
Query: 708 nnnncgcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgtaccgcgggtacgc 767
|| ||| ||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 709 tgggcgtgtcaagactgactggtccaaggcgcccttcgtcgcgtcgtaccaggggtacgc 768
Query: 768 cg 769
||
Sbjct: 769 cg 770
>gb|BG605826.1|BG605826 RHIZ2_81_H11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 700
Score = 690 bits (348), Expect = 0.0
Identities = 488/537 (90%)
Strand = Plus / Plus
Query: 427 ttcctggggaacgcgagcggggagccgtacacggtgcacacgaacgtgtacagccagggg 486
||||| || ||||||||||| ||||| |||||||||||||| ||||||||||||||||||
Sbjct: 1 ttcctcggcaacgcgagcggagagccctacacggtgcacaccaacgtgtacagccagggg 60
Query: 487 aagggcgggcgggagcagcagttccggatgtggttcgaccccacggcggccttccacgcc 546
|| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 61 aaaggcgggcgggagcagcagttccggatgtggttcgaccccaccgcggacttccacgcc 120
Query: 547 tactccgtgctgtggaaccccgcccacgtcgtcttctacgtggacggcgtccccatccgg 606
||||| ||||| |||||||| ||||| ||||||||||||| |||||||||||||||||
Sbjct: 121 tactcggtgctctggaacccttcccacatcgtcttctacgtcgacggcgtccccatccgc 180
Query: 607 gagttccggcgccgcggcgacgggaccgtgccgttcccgacgtcgcagccgatgcgggtg 666
|||||||| ||||| |||||| | |||||||||||||||||||||||||||||||||
Sbjct: 181 gagttccgccgccgaaacgacggcgcggtgccgttcccgacgtcgcagccgatgcgggtg 240
Query: 667 tacgccagcgtgtgggacgcggaggagtgggccacgcannnnnnncgcgtccggaccgac 726
|||||||||||||||||||| ||||||||||||||||| || ||| ||| |||
Sbjct: 241 tacgccagcgtgtgggacgccgaggagtgggccacgcagggcgggcgtgtcaagacggac 300
Query: 727 tggtccaaggcgcccttcgtcgcgtcgtaccgcgggtacgccgccaccgggtgcaccgcg 786
||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||
Sbjct: 301 tggtccaaggcgcccttcgtcgcgtcgtaccaggggtacgccgccgccggctgcaccgcg 360
Query: 787 ccggacgccgccgcctgcgcgcgctccaacggcgcatggatgtcgcaggagctcgacagc 846
|| ||||||||||| ||||| | ||||||||||| ||||||||||||||||||||||||
Sbjct: 361 cccgacgccgccgcgtgcgccaggtccaacggcgcctggatgtcgcaggagctcgacagc 420
Query: 847 gccggccaggagcagctccgccgggcgcaggccagctacatgatctacaactactgcacc 906
|||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gccgcgcaggggcagctccgccgggcgcaggccagctacatgatctacaactactgcacc 480
Query: 907 gataagtaccggttcccgcagggcccgccgcccgagtgctcgtcgccggccaagtag 963
||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 481 gataagtaccgcttcccgcagggaccgccgcccgagtgctcgtcgccggccaagtag 537
Score = 52.0 bits (26), Expect = 1e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1048 tacggcataagttcggcggatatacgtata 1077
||||||||||||||||||||||||| ||||
Sbjct: 600 tacggcataagttcggcggatatacatata 629
>gb|CW111252.1|CW111252 104_484_11104205_116_34531_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11104205, DNA
sequence
Length = 656
Score = 684 bits (345), Expect = 0.0
Identities = 573/647 (88%), Gaps = 12/647 (1%)
Strand = Plus / Plus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 15 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 74
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 75 gtcgc---cggcggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 131
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 132 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 191
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 192 gggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggtg 251
Query: 349 ccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcagggtt-cgcagca 407
|| || ||||||||||||||||| |||||||||| || || |||||||| ||| ||
Sbjct: 252 ccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggcagcgcc-ca 310
Query: 408 cgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacac 467
|||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 311 cgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacggtgcacac 370
Query: 468 gaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccc 527
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 371 caacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtggttcgaccc 430
Query: 528 cacggcggccttccacgcctactccgtgctgtggaaccccgcccacgtcgtcttctacgt 587
||| |||| ||||||||||||||| ||||| |||||||| ||||| |||||||||||||
Sbjct: 431 caccgcggacttccacgcctactcggtgctctggaacccttcccacatcgtcttctacgt 490
Query: 588 ggacggcgtccccatccgggagttccggcgccgcggcgacgggaccgtgccgttcccgac 647
||||||||||||||||| |||||||| ||||| |||||| | ||||||||||||||
Sbjct: 491 cgacggcgtccccatccgcgagttccgccgccgaaacgacggcgcggtgccgttcccgac 550
Query: 648 gtcgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgcannn 707
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 551 gtcgcagccgatgcgggtgtacgccagcgtgtgggacgccgaggagtgggccacgcaggg 610
Query: 708 nnnncgcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgt 754
|| ||| ||| ||||||||| |||||||||||||||||||||
Sbjct: 611 cgggcgtgtcaagacggactggtcc-aggcgcccttcgtcgcgtcgt 656
>gb|CD211530.1|CD211530 HS1_60_G11.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_60_G11_A012 5', mRNA sequence
Length = 726
Score = 674 bits (340), Expect = 0.0
Identities = 535/597 (89%), Gaps = 11/597 (1%)
Strand = Plus / Plus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 119 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 178
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 179 gtcgc---cggcggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 235
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 236 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 295
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 296 gggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggtg 355
Query: 349 ccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcagggtt-cgcagca 407
|| || ||||||||||||||||| |||||||||| || || |||||||| ||| ||
Sbjct: 356 ccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggcagcgcc-ca 414
Query: 408 cgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacac 467
|||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 415 cgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacggtgcacac 474
Query: 468 gaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccc 527
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 475 caacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtggttcgaccc 534
Query: 528 cacggcggccttccacgcctactccgtgctgtggaaccccgcccacgtcgtcttctacgt 587
||| |||| ||||||||||||||| ||||| |||||||| ||||| |||||||||||||
Sbjct: 535 caccgcggacttccacgcctactcggtgctctggaacccttcccacatcgtcttctacgt 594
Query: 588 ggacggcgtccccatccgggagttccggcgccgcggcgacgggaccgtgccgttcccgac 647
||||||||||||||||| |||||||| ||||| |||||| | ||||||||||||||
Sbjct: 595 cgacggcgtccccatccgcgagttccgccgccgaaacgacggcgcggtgccgttcccgac 654
Query: 648 gtcgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgca 704
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 655 gtcgcagccgatgcgggtgtacgccagcgtgtgggacgccgaggagtgggccacgca 711
>gb|CX622346.1|CX622346 GABR1_63_A06.g2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_63_A06_A002 5', mRNA sequence
Length = 697
Score = 674 bits (340), Expect = 0.0
Identities = 535/597 (89%), Gaps = 11/597 (1%)
Strand = Plus / Plus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 93 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 152
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || |||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 153 gtcgc---cggcggcggcaacttctaccagggcgtggacatcacgtggggcgacggccgt 209
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 210 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 269
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 270 gggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggtg 329
Query: 349 ccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcagggtt-cgcagca 407
|| || ||||||||||||||||| |||||||||| || || |||||||| ||| ||
Sbjct: 330 ccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggcagcgcc-ca 388
Query: 408 cgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacac 467
|||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 389 cgacgagatcgacttcgagttcctcggcaacgcgagcggggagccctacacggtgcacac 448
Query: 468 gaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccc 527
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 449 caacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtggttcgaccc 508
Query: 528 cacggcggccttccacgcctactccgtgctgtggaaccccgcccacgtcgtcttctacgt 587
||| |||| ||||||||||||||| ||||| |||||||| ||||| |||||||||||||
Sbjct: 509 caccgcggacttccacgcctactcggtgctctggaacccttcccacatcgtcttctacgt 568
Query: 588 ggacggcgtccccatccgggagttccggcgccgcggcgacgggaccgtgccgttcccgac 647
||||||||||||||||| |||||||| ||||| |||||| | ||||||||||||||
Sbjct: 569 cgacggcgtccccatccgcgagttccgccgccgaaacgacggcgcggtgccgttcccgac 628
Query: 648 gtcgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgca 704
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 629 gtcgcagccgatgcgggtgtacgccagcgtgtgggacgccgaggagtgggccacgca 685
>gb|CX618502.1|CX618502 GABR1_40_B04.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_40_B04_A002 3', mRNA sequence
Length = 687
Score = 666 bits (336), Expect = 0.0
Identities = 464/509 (91%)
Strand = Plus / Plus
Query: 455 acacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcagttccgga 514
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 acacggtgcacaccaacgtgtacagccaggggaaaggcgggcgggagcagcagttccgga 60
Query: 515 tgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaaccccgcccacg 574
|||||||||||||||| |||| ||||||||||||||| ||||| |||||||| |||||
Sbjct: 61 tgtggttcgaccccaccgcggacttccacgcctactcggtgctctggaacccttcccaca 120
Query: 575 tcgtcttctacgtggacggcgtccccatccgggagttccggcgccgcggcgacgggaccg 634
||||||||||||| ||||||||||||||||| |||||||| ||||| |||||| | |
Sbjct: 121 tcgtcttctacgtcgacggcgtccccatccgcgagttccgccgccgaaacgacggcgcgg 180
Query: 635 tgccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagt 694
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 181 tgccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtgtgggacgccgaggagt 240
Query: 695 gggccacgcannnnnnncgcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgt 754
|||||||||| || ||| ||| |||||||||||||||||||||||||||||||
Sbjct: 241 gggccacgcagggcgggcgtgtcaagacggactggtccaaggcgcccttcgtcgcgtcgt 300
Query: 755 accgcgggtacgccgccaccgggtgcaccgcgccggacgccgccgcctgcgcgcgctcca 814
||| |||||||||||| |||| ||||||||||| ||||||||||| ||||| | ||||
Sbjct: 301 accaggggtacgccgccgccggctgcaccgcgcccgacgccgccgcgtgcgccaggtcca 360
Query: 815 acggcgcatggatgtcgcaggagctcgacagcgccggccaggagcagctccgccgggcgc 874
||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 361 acggcgcctggatgtcgcaggagctcgacagcgccgcgcaggggcagctccgccgggcgc 420
Query: 875 aggccagctacatgatctacaactactgcaccgataagtaccggttcccgcagggcccgc 934
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 421 aggccagctacatgatctacaactactgcaccgataagtaccgcttcccgcagggaccgc 480
Query: 935 cgcccgagtgctcgtcgccggccaagtag 963
|||||||||||||||||||||||||||||
Sbjct: 481 cgcccgagtgctcgtcgccggccaagtag 509
Score = 52.0 bits (26), Expect = 1e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1048 tacggcataagttcggcggatatacgtata 1077
||||||||||||||||||||||||| ||||
Sbjct: 572 tacggcataagttcggcggatatacatata 601
>gb|CN142828.1|CN142828 WOUND1_12_B12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_12_B12_A002 5', mRNA sequence
Length = 711
Score = 660 bits (333), Expect = 0.0
Identities = 531/594 (89%), Gaps = 11/594 (1%)
Strand = Plus / Plus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 122 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 181
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 182 gtcgc---cggcggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 238
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 239 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 298
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 299 gggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggtg 358
Query: 349 ccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcagggtt-cgcagca 407
|| || ||||||||||||||||| |||||||||| || || |||||||| ||| ||
Sbjct: 359 ccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggcagcgcc-ca 417
Query: 408 cgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacac 467
|||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 418 cgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacggtgcacac 477
Query: 468 gaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccc 527
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 478 caacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtggttcgaccc 537
Query: 528 cacggcggccttccacgcctactccgtgctgtggaaccccgcccacgtcgtcttctacgt 587
||| |||| ||||||||||||||| ||||| |||||||| ||||| |||||||||||||
Sbjct: 538 caccgcggacttccacgcctactcggtgctctggaacccttcccacatcgtcttctacgt 597
Query: 588 ggacggcgtccccatccgggagttccggcgccgcggcgacgggaccgtgccgttcccgac 647
||| ||||||||||||| |||||||| ||||| |||||| | ||||||||||||||
Sbjct: 598 cgacagcgtccccatccgcgagttccgccgccgaaacgacggcgcggtgccgttcccgac 657
Query: 648 gtcgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccac 701
||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 658 gtcgcagccgatgcgggtgtacgccagcgtgtgggacgccgaggagtgggccac 711
>gb|CN146426.1|CN146426 WOUND1_41_D07.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_41_D07_A002 3', mRNA sequence
Length = 707
Score = 654 bits (330), Expect = 0.0
Identities = 461/507 (90%)
Strand = Plus / Plus
Query: 457 acggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatg 516
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 acggtgcacaccaacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatg 60
Query: 517 tggttcgaccccacggcggccttccacgcctactccgtgctgtggaaccccgcccacgtc 576
|||||||||||||| |||| ||||||||||||||| ||||| |||||||| ||||| ||
Sbjct: 61 tggttcgaccccaccgcggacttccacgcctactcggtgctctggaacccttcccacatc 120
Query: 577 gtcttctacgtggacggcgtccccatccgggagttccggcgccgcggcgacgggaccgtg 636
||||| ||||| ||||||||||||||||| |||||||| ||||| |||||| | |||
Sbjct: 121 gtcttttacgtcgacggcgtccccatccgcgagttccgccgccgaaacgacggcgcggtg 180
Query: 637 ccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgg 696
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 181 ccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtgtgggacgccgaggagtgg 240
Query: 697 gccacgcannnnnnncgcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgtac 756
|||||||| || ||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 241 gccacgcagggcgggcgtgtcaagacggactggtccaaggcgcccttcgtcgcgtcgtac 300
Query: 757 cgcgggtacgccgccaccgggtgcaccgcgccggacgccgccgcctgcgcgcgctccaac 816
| |||||||||||| |||| ||||||||||| ||||||||||| ||||| | ||||||
Sbjct: 301 caggggtacgccgccgccggctgcaccgcgcccgacgccgccgcgtgcgccaggtccaac 360
Query: 817 ggcgcatggatgtcgcaggagctcgacagcgccggccaggagcagctccgccgggcgcag 876
||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 361 ggcgcctggatgtcgcaggagctcgacagcgccgcgcaggggcagctccgccgggcgcag 420
Query: 877 gccagctacatgatctacaactactgcaccgataagtaccggttcccgcagggcccgccg 936
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 421 gccagctacatgatctacaactactgcaccgataagtaccgcttcccgcagggaccgccg 480
Query: 937 cccgagtgctcgtcgccggccaagtag 963
|||||||||||||||||||||||||||
Sbjct: 481 cccgagtgctcgtcgccggccaagtag 507
Score = 52.0 bits (26), Expect = 1e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1048 tacggcataagttcggcggatatacgtata 1077
||||||||||||||||||||||||| ||||
Sbjct: 570 tacggcataagttcggcggatatacatata 599
>gb|CD204116.1|CD204116 HS1_3_F11.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_3_F11_A012 5', mRNA sequence
Length = 690
Score = 640 bits (323), Expect = 0.0
Identities = 515/576 (89%), Gaps = 11/576 (1%)
Strand = Plus / Plus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 119 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 178
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 179 gtcgc---cggcggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 235
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 236 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 295
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 296 gggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggtg 355
Query: 349 ccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcagggtt-cgcagca 407
|| || ||||||||||||||||| |||||||||| || || |||||||| ||| ||
Sbjct: 356 ccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggcagcgcc-ca 414
Query: 408 cgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacac 467
|||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 415 cgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacggtgcacac 474
Query: 468 gaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccc 527
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 475 caacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtggttcgaccc 534
Query: 528 cacggcggccttccacgcctactccgtgctgtggaaccccgcccacgtcgtcttctacgt 587
||| |||| ||||||||||||||| ||||| |||||||| ||||| |||||||||||||
Sbjct: 535 caccgcggacttccacgcctactcggtgctctggaacccttcccacatcgtcttctacgt 594
Query: 588 ggacggcgtccccatccgggagttccggcgccgcggcgacgggaccgtgccgttcccgac 647
||||||||||||||||| |||||||| ||||| |||||| | ||||||||||||||
Sbjct: 595 cgacggcgtccccatccgcgagttccgccgccgaaacgacggcgcggtgccgttcccgac 654
Query: 648 gtcgcagccgatgcgggtgtacgccagcgtgtggga 683
||||||||||||||||||||||||||||||||||||
Sbjct: 655 gtcgcagccgatgcgggtgtacgccagcgtgtggga 690
>gb|CD206117.1|CD206117 HS1_20_F09.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_20_F09_A012 5', mRNA sequence
Length = 695
Score = 638 bits (322), Expect = 0.0
Identities = 514/575 (89%), Gaps = 11/575 (1%)
Strand = Plus / Plus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 125 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 184
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 185 gtcgc---cggcggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 241
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 242 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 301
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 302 gggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggtg 361
Query: 349 ccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcagggtt-cgcagca 407
|| || ||||||||||||||||| |||||||||| || || |||||||| ||| ||
Sbjct: 362 ccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggcagcgcc-ca 420
Query: 408 cgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacac 467
|||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 421 cgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacggtgcacac 480
Query: 468 gaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccc 527
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtggttcgaccc 540
Query: 528 cacggcggccttccacgcctactccgtgctgtggaaccccgcccacgtcgtcttctacgt 587
||| |||| ||||||||||||||| ||||| |||||||| ||||| |||||||||||||
Sbjct: 541 caccgcggacttccacgcctactcggtgctctggaacccttcccacatcgtcttctacgt 600
Query: 588 ggacggcgtccccatccgggagttccggcgccgcggcgacgggaccgtgccgttcccgac 647
||||||||||||||||| |||||||| ||||| |||||| | ||||||||||||||
Sbjct: 601 cgacggcgtccccatccgcgagttccgccgccgaaacgacggcgcggtgccgttcccgac 660
Query: 648 gtcgcagccgatgcgggtgtacgccagcgtgtggg 682
|||||||||||||||||||||||||||||||||||
Sbjct: 661 gtcgcagccgatgcgggtgtacgccagcgtgtggg 695
>gb|BE356755.1|BE356755 DG1_12_C08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 610
Score = 585 bits (295), Expect = e-165
Identities = 417/460 (90%)
Strand = Plus / Plus
Query: 504 gcagttccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaa 563
||||||||||||||||||||||||||| |||| ||||||||||||||| ||||| |||||
Sbjct: 1 gcagttccggatgtggttcgaccccaccgcggacttccacgcctactcggtgctctggaa 60
Query: 564 ccccgcccacgtcgtcttctacgtggacggcgtccccatccgggagttccggcgccgcgg 623
||| ||||| ||||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 61 cccttcccacatcgtcttctacgtcgacggcgtccccatccgcgagttccgccgccgaaa 120
Query: 624 cgacgggaccgtgccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtgtggga 683
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgacggcgcggtgccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtgtggga 180
Query: 684 cgcggaggagtgggccacgcannnnnnncgcgtccggaccgactggtccaaggcgccctt 743
||| ||||||||||||||||| || ||| ||| ||||||||||||||||||||
Sbjct: 181 cgccgaggagtgggccacgcagggcgggcgtgtcaagacggactggtccaaggcgccctt 240
Query: 744 cgtcgcgtcgtaccgcgggtacgccgccaccgggtgcaccgcgccggacgccgccgcctg 803
|||||||||||||| |||||||||||| |||| ||||||||||| ||||||||||| ||
Sbjct: 241 cgtcgcgtcgtaccaggggtacgccgccgccggctgcaccgcgcccgacgccgccgcgtg 300
Query: 804 cgcgcgctccaacggcgcatggatgtcgcaggagctcgacagcgccggccaggagcagct 863
||| | ||||||||||| |||||||||||||||||||||||||||| |||| ||||||
Sbjct: 301 cgccaggtccaacggcgcctggatgtcgcaggagctcgacagcgccgcgcaggggcagct 360
Query: 864 ccgccgggcgcaggccagctacatgatctacaactactgcaccgataagtaccggttccc 923
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 361 ccgccgggcgcaggccagctacatgatctacaactactgcaccgataagtaccgcttccc 420
Query: 924 gcagggcccgccgcccgagtgctcgtcgccggccaagtag 963
|||||| |||||||||||||||||||||||||||||||||
Sbjct: 421 gcagggaccgccgcccgagtgctcgtcgccggccaagtag 460
Score = 52.0 bits (26), Expect = 1e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1048 tacggcataagttcggcggatatacgtata 1077
||||||||||||||||||||||||| ||||
Sbjct: 523 tacggcataagttcggcggatatacatata 552
>gb|CX618587.1|CX618587 GABR1_40_B04.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_40_B04_A002 5', mRNA sequence
Length = 647
Score = 575 bits (290), Expect = e-162
Identities = 482/543 (88%), Gaps = 11/543 (2%)
Strand = Plus / Plus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 109 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 168
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 169 gtcgc---cggcggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 225
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 226 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 285
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 286 gggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggtg 345
Query: 349 ccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcagggtt-cgcagca 407
|| || ||||||||||||||||| |||||||||| || || |||||||| ||| ||
Sbjct: 346 ccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggcagcgcc-ca 404
Query: 408 cgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacac 467
|||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 405 cgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacggtgcacac 464
Query: 468 gaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccc 527
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 465 caacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtggttcgaccc 524
Query: 528 cacggcggccttccacgcctactccgtgctgtggaaccccgcccacgtcgtcttctacgt 587
||| |||| ||||||||||||||| ||||| |||||||| ||||| |||||||||||||
Sbjct: 525 caccgcggacttccacgcctactcggtgctctggaacccttcccacatcgtcttctacgt 584
Query: 588 ggacggcgtccccatccgggagttccggcgccgcggcgacgggaccgtgccgttcccgac 647
||||||||||||||||| |||||||| ||||| |||||| | ||||||||||||||
Sbjct: 585 cgacggcgtccccatccgcgagttccgccgccgaaacgacggcgcggtgccgttcccgac 644
Query: 648 gtc 650
|||
Sbjct: 645 gtc 647
>gb|CN147743.1|CN147743 WOUND1_51_G03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_51_G03_A002 5', mRNA sequence
Length = 520
Score = 555 bits (280), Expect = e-156
Identities = 457/513 (89%), Gaps = 11/513 (2%)
Strand = Plus / Plus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 8 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 67
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 68 gtcgc---cggcggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 124
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 125 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 184
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||| ||||||||||||||| ||||| ||
Sbjct: 185 gggttccagtccaagtcccagtacctctacggccacttcgacatgcagctgaagctggtg 244
Query: 349 ccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcagggtt-cgcagca 407
|| || ||||||||||||||||| |||||||||| || || |||||||| ||| ||
Sbjct: 245 ccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggcagcgcc-ca 303
Query: 408 cgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacac 467
|||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 304 cgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacggtgcacac 363
Query: 468 gaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccc 527
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 364 caacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtggttcgaccc 423
Query: 528 cacggcggccttccacgcctactccgtgctgtggaaccccgcccacgtcgtcttctacgt 587
||| |||| ||||||||||||||| ||||| |||||||| ||||| |||||||||||||
Sbjct: 424 caccgcggacttccacgcctactcggtgctctggaacccttcccacatcgtcttctacgt 483
Query: 588 ggacggcgtccccatccgggagttccggcgccg 620
||||||||||||||||| |||||||| |||||
Sbjct: 484 cgacggcgtccccatccgcgagttccgccgccg 516
>gb|BG649569.1|BG649569 RHIZ2_81_H11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 584
Score = 533 bits (269), Expect = e-149
Identities = 437/490 (89%), Gaps = 11/490 (2%)
Strand = Plus / Plus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 99 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 158
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 159 gtcgc---cggcggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 215
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 216 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 275
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 276 gggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggtg 335
Query: 349 ccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcaggg-ttcgcagca 407
|| || ||||||||||||||||| |||||||||| || || |||||||| ||| ||
Sbjct: 336 ccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggcagcgc-cca 394
Query: 408 cgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacac 467
|||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 395 cgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacggtgcacac 454
Query: 468 gaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccc 527
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 455 caacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtggttcgaccc 514
Query: 528 cacggcggccttccacgcctactccgtgctgtggaaccccgcccacgtcgtcttctacgt 587
||| |||| ||||||||||||||| ||||| |||||||| ||||| |||||||||||||
Sbjct: 515 caccgcggacttccacgcctactcggtgctctggaacccttcccacatcgtcttctacgt 574
Query: 588 ggacggcgtc 597
|||||||||
Sbjct: 575 cgacggcgtc 584
>gb|CW355876.1|CW355876 fsbb001f020l09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f020l09, DNA
sequence
Length = 629
Score = 527 bits (266), Expect = e-148
Identities = 434/487 (89%), Gaps = 11/487 (2%)
Strand = Plus / Minus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 483 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 424
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 423 gtcgc---cggcggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 367
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 366 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 307
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 306 gggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggtg 247
Query: 349 ccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcaggg-ttcgcagca 407
|| || ||||||||||||||||| |||||||||| || || |||||||| ||| ||
Sbjct: 246 ccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggcagcgc-cca 188
Query: 408 cgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacac 467
|||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 187 cgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacggtgcacac 128
Query: 468 gaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccc 527
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 127 caacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtggttcgaccc 68
Query: 528 cacggcggccttccacgcctactccgtgctgtggaaccccgcccacgtcgtcttctacgt 587
||| |||| ||||||||||||||| ||||| |||||||| ||||| |||||||||||||
Sbjct: 67 caccgcggacttccacgcctactcggtgctctggaacccttcccacatcgtcttctacgt 8
Query: 588 ggacggc 594
||||||
Sbjct: 7 cgacggc 1
>gb|CD207433.1|CD207433 HS1_65_F03.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_65_F03_A012 5', mRNA sequence
Length = 607
Score = 523 bits (264), Expect = e-146
Identities = 432/485 (89%), Gaps = 11/485 (2%)
Strand = Plus / Plus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 127 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 186
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 187 gtcgc---cggcggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 243
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 244 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 303
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 304 gggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggtg 363
Query: 349 ccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcaggg-ttcgcagca 407
|| || ||||||||||||||||| |||||||||| || || |||||||| ||| ||
Sbjct: 364 ccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggcagcgc-cca 422
Query: 408 cgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacac 467
|||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 423 cgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacggtgcacac 482
Query: 468 gaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccc 527
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 483 caacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtggttcgaccc 542
Query: 528 cacggcggccttccacgcctactccgtgctgtggaaccccgcccacgtcgtcttctacgt 587
||| |||| ||||||||||||||| ||||| |||||||| ||||| |||||||||||||
Sbjct: 543 caccgcggacttccacgcctactcggtgctctggaacccttcccacatcgtcttctacgt 602
Query: 588 ggacg 592
||||
Sbjct: 603 cgacg 607
>gb|AW672522.1|AW672522 LG1_360_D12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 574
Score = 521 bits (263), Expect = e-146
Identities = 428/480 (89%), Gaps = 11/480 (2%)
Strand = Plus / Plus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 95 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 154
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 155 gtcgc---cggcggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 211
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 212 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 271
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 272 gggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggtg 331
Query: 349 ccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcaggg-ttcgcagca 407
|| || ||||||||||||||||| |||||||||| || || |||||||| ||| ||
Sbjct: 332 ccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggcagcgc-cca 390
Query: 408 cgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacac 467
|||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 391 cgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacggtgcacac 450
Query: 468 gaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccc 527
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 451 caacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtggttcgaccc 510
Query: 528 cacggcggccttccacgcctactccgtgctgtggaaccccgcccacgtcgtcttctacgt 587
||| |||| ||||||||||||||| ||||| |||||||| ||||| |||||||||||||
Sbjct: 511 caccgcggacttccacgcctactcggtgctctggaacccttcccacatcgtcttctacgt 570
>gb|CW218469.1|CW218469 104_652_11196207_116_37528_062 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11196207, DNA
sequence
Length = 718
Score = 507 bits (256), Expect = e-142
Identities = 366/405 (90%)
Strand = Plus / Plus
Query: 559 tggaaccccgcccacgtcgtcttctacgtggacggcgtccccatccgggagttccggcgc 618
|||||||| ||||| ||||||||||||| ||||||||||||||||| |||||||| |||
Sbjct: 1 tggaacccttcccacatcgtcttctacgtcgacggcgtccccatccgcgagttccgccgc 60
Query: 619 cgcggcgacgggaccgtgccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtg 678
|| |||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgaaacgacggcgcggtgccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtg 120
Query: 679 tgggacgcggaggagtgggccacgcannnnnnncgcgtccggaccgactggtccaaggcg 738
|||||||| ||||||||||||||||| || ||| ||| |||||||||||||||
Sbjct: 121 tgggacgccgaggagtgggccacgcagggcgggcgtgtcaagacggactggtccaaggcg 180
Query: 739 cccttcgtcgcgtcgtaccgcgggtacgccgccaccgggtgcaccgcgccggacgccgcc 798
||||||||||||||||||| |||||||||||| |||| ||||||||||| |||||||||
Sbjct: 181 cccttcgtcgcgtcgtaccaggggtacgccgccgccggctgcaccgcgcccgacgccgcc 240
Query: 799 gcctgcgcgcgctccaacggcgcatggatgtcgcaggagctcgacagcgccggccaggag 858
|| ||||| | ||||||||||| |||||||||||||||||||||||||||| |||| |
Sbjct: 241 gcgtgcgccaggtccaacggcgcctggatgtcgcaggagctcgacagcgccgcgcagggg 300
Query: 859 cagctccgccgggcgcaggccagctacatgatctacaactactgcaccgataagtaccgg 918
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagctccgccgggcgcaggccagctacatgatctacaactactgcaccgataagtaccgc 360
Query: 919 ttcccgcagggcccgccgcccgagtgctcgtcgccggccaagtag 963
||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 361 ttcccgcagggaccgccgcccgagtgctcgtcgccggccaagtag 405
Score = 52.0 bits (26), Expect = 1e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1048 tacggcataagttcggcggatatacgtata 1077
||||||||||||||||||||||||| ||||
Sbjct: 468 tacggcataagttcggcggatatacatata 497
>gb|CX621324.1|CX621324 GABR1_57_A12.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_57_A12_A002 5', mRNA sequence
Length = 579
Score = 504 bits (254), Expect = e-140
Identities = 410/459 (89%), Gaps = 11/459 (2%)
Strand = Plus / Plus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 113 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 172
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 173 gtcgc---cggcggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 229
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 230 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 289
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 290 gggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggtg 349
Query: 349 ccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcaggg-ttcgcagca 407
|| || ||||||||||||||||| |||||||||| || || |||||||| ||| ||
Sbjct: 350 ccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggcagcgc-cca 408
Query: 408 cgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacac 467
|||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 409 cgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacggtgcacac 468
Query: 468 gaacgtgtacagccaggggaagggcgggcgggagcagcagttccggatgtggttcgaccc 527
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 469 caacgtgtacagccaggggaaaggcgggcgggagcagcagttccggatgtggttcgaccc 528
Query: 528 cacggcggccttccacgcctactccgtgctgtggaaccc 566
||| |||| ||||||||||||||| ||||| ||||||||
Sbjct: 529 caccgcggacttccacgcctactcggtgctctggaaccc 567
>gb|AW285132.1|AW285132 LG1_206_E11.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 574
Score = 500 bits (252), Expect = e-139
Identities = 353/389 (90%)
Strand = Plus / Plus
Query: 575 tcgtcttctacgtggacggcgtccccatccgggagttccggcgccgcggcgacgggaccg 634
||||||||||||| ||||||||||||||||| |||||||| ||||| |||||| | |
Sbjct: 1 tcgtcttctacgtcgacggcgtccccatccgcgagttccgccgccgaaacgacggcgcgg 60
Query: 635 tgccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagt 694
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 61 tgccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtgtgggacgccgaggagt 120
Query: 695 gggccacgcannnnnnncgcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgt 754
|||||||||| || ||| ||| |||||||||||||||||||||||||||||||
Sbjct: 121 gggccacgcagggcgggcgtgtcaagacggactggtccaaggcgcccttcgtcgcgtcgt 180
Query: 755 accgcgggtacgccgccaccgggtgcaccgcgccggacgccgccgcctgcgcgcgctcca 814
||| |||||||||||| |||| ||||||||||| ||||||||||| ||||| | ||||
Sbjct: 181 accaggggtacgccgccgccggctgcaccgcgcccgacgccgccgcgtgcgccaggtcca 240
Query: 815 acggcgcatggatgtcgcaggagctcgacagcgccggccaggagcagctccgccgggcgc 874
||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 241 acggcgcctggatgtcgcaggagctcgacagcgccgcgcaggggcagctccgccgggcgc 300
Query: 875 aggccagctacatgatctacaactactgcaccgataagtaccggttcccgcagggcccgc 934
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 301 aggccagctacatgatctacaactactgcaccgataagtaccgcttcccgcagggaccgc 360
Query: 935 cgcccgagtgctcgtcgccggccaagtag 963
|||||||||||||||||||||||||||||
Sbjct: 361 cgcccgagtgctcgtcgccggccaagtag 389
Score = 52.0 bits (26), Expect = 1e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1048 tacggcataagttcggcggatatacgtata 1077
||||||||||||||||||||||||| ||||
Sbjct: 452 tacggcataagttcggcggatatacatata 481
>gb|AW282975.1|AW282975 LG1_206_D03.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 560
Score = 480 bits (242), Expect = e-133
Identities = 340/375 (90%)
Strand = Plus / Plus
Query: 589 gacggcgtccccatccgggagttccggcgccgcggcgacgggaccgtgccgttcccgacg 648
||||||||||||||||| |||||||| ||||| |||||| | |||||||||||||||
Sbjct: 1 gacggcgtccccatccgcgagttccgccgccgaaacgacggcgcggtgccgttcccgacg 60
Query: 649 tcgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgcannnn 708
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61 tcgcagccgatgcgggtgtacgccagcgtgtgggacgccgaggagtgggccacgcagggc 120
Query: 709 nnncgcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgtaccgcgggtacgcc 768
|| ||| ||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 121 gggcgtgtcaagacggactggtccaaggcgcccttcgtcgcgtcgtaccaggggtacgcc 180
Query: 769 gccaccgggtgcaccgcgccggacgccgccgcctgcgcgcgctccaacggcgcatggatg 828
||| |||| ||||||||||| ||||||||||| ||||| | ||||||||||| ||||||
Sbjct: 181 gccgccggctgcaccgcgcccgacgccgccgcgtgcgccaggtccaacggcgcctggatg 240
Query: 829 tcgcaggagctcgacagcgccggccaggagcagctccgccgggcgcaggccagctacatg 888
|||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 241 tcgcaggagctcgacagcgccgcgcaggggcagctccgccgggcgcaggccagctacatg 300
Query: 889 atctacaactactgcaccgataagtaccggttcccgcagggcccgccgcccgagtgctcg 948
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 301 atctacaactactgcaccgataagtaccgcttcccgcagggaccgccgcccgagtgctcg 360
Query: 949 tcgccggccaagtag 963
|||||||||||||||
Sbjct: 361 tcgccggccaagtag 375
Score = 52.0 bits (26), Expect = 1e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1048 tacggcataagttcggcggatatacgtata 1077
||||||||||||||||||||||||| ||||
Sbjct: 438 tacggcataagttcggcggatatacatata 467
>gb|CD235852.1|CD235852 SS1_24_D08.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_24_D08_A012 3', mRNA sequence
Length = 567
Score = 466 bits (235), Expect = e-129
Identities = 333/368 (90%)
Strand = Plus / Plus
Query: 596 tccccatccgggagttccggcgccgcggcgacgggaccgtgccgttcccgacgtcgcagc 655
|||||||||| |||||||| ||||| |||||| | ||||||||||||||||||||||
Sbjct: 1 tccccatccgcgagttccgccgccgaaacgacggcgcggtgccgttcccgacgtcgcagc 60
Query: 656 cgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgcannnnnnncgcg 715
||||||||||||||||||||||||||||||| ||||||||||||||||| || |
Sbjct: 61 cgatgcgggtgtacgccagcgtgtgggacgccgaggagtgggccacgcagggcgggcgtg 120
Query: 716 tccggaccgactggtccaaggcgcccttcgtcgcgtcgtaccgcgggtacgccgccaccg 775
|| ||| |||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 121 tcaagacggactggtccaaggcgcccttcgtcgcgtcgtaccaggggtacgccgccgccg 180
Query: 776 ggtgcaccgcgccggacgccgccgcctgcgcgcgctccaacggcgcatggatgtcgcagg 835
| ||||||||||| ||||||||||| ||||| | ||||||||||| |||||||||||||
Sbjct: 181 gctgcaccgcgcccgacgccgccgcgtgcgccaggtccaacggcgcctggatgtcgcagg 240
Query: 836 agctcgacagcgccggccaggagcagctccgccgggcgcaggccagctacatgatctaca 895
||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agctcgacagcgccgcgcaggggcagctccgccgggcgcaggccagctacatgatctaca 300
Query: 896 actactgcaccgataagtaccggttcccgcagggcccgccgcccgagtgctcgtcgccgg 955
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 301 actactgcaccgataagtaccgcttcccgcagggaccgccgcccgagtgctcgtcgccgg 360
Query: 956 ccaagtag 963
||||||||
Sbjct: 361 ccaagtag 368
Score = 52.0 bits (26), Expect = 1e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1048 tacggcataagttcggcggatatacgtata 1077
||||||||||||||||||||||||| ||||
Sbjct: 431 tacggcataagttcggcggatatacatata 460
>gb|CD236573.1|CD236573 SS1_35_F07.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_35_F07_A012 3', mRNA sequence
Length = 551
Score = 466 bits (235), Expect = e-129
Identities = 333/368 (90%)
Strand = Plus / Plus
Query: 596 tccccatccgggagttccggcgccgcggcgacgggaccgtgccgttcccgacgtcgcagc 655
|||||||||| |||||||| ||||| |||||| | ||||||||||||||||||||||
Sbjct: 1 tccccatccgcgagttccgccgccgaaacgacggcgcggtgccgttcccgacgtcgcagc 60
Query: 656 cgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgcannnnnnncgcg 715
||||||||||||||||||||||||||||||| ||||||||||||||||| || |
Sbjct: 61 cgatgcgggtgtacgccagcgtgtgggacgccgaggagtgggccacgcagggcgggcgtg 120
Query: 716 tccggaccgactggtccaaggcgcccttcgtcgcgtcgtaccgcgggtacgccgccaccg 775
|| ||| |||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 121 tcaagacggactggtccaaggcgcccttcgtcgcgtcgtaccaggggtacgccgccgccg 180
Query: 776 ggtgcaccgcgccggacgccgccgcctgcgcgcgctccaacggcgcatggatgtcgcagg 835
| ||||||||||| ||||||||||| ||||| | ||||||||||| |||||||||||||
Sbjct: 181 gctgcaccgcgcccgacgccgccgcgtgcgccaggtccaacggcgcctggatgtcgcagg 240
Query: 836 agctcgacagcgccggccaggagcagctccgccgggcgcaggccagctacatgatctaca 895
||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agctcgacagcgccgcgcaggggcagctccgccgggcgcaggccagctacatgatctaca 300
Query: 896 actactgcaccgataagtaccggttcccgcagggcccgccgcccgagtgctcgtcgccgg 955
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 301 actactgcaccgataagtaccgcttcccgcagggaccgccgcccgagtgctcgtcgccgg 360
Query: 956 ccaagtag 963
||||||||
Sbjct: 361 ccaagtag 368
Score = 52.0 bits (26), Expect = 1e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1048 tacggcataagttcggcggatatacgtata 1077
||||||||||||||||||||||||| ||||
Sbjct: 431 tacggcataagttcggcggatatacatata 460
>gb|BE352863.1|BE352863 LG1_267_G09.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 479
Score = 450 bits (227), Expect = e-124
Identities = 301/328 (91%)
Strand = Plus / Minus
Query: 636 gccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtg 695
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 453 gccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtgtgggacgccgaggagtg 394
Query: 696 ggccacgcannnnnnncgcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgta 755
||||||||| || ||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 393 ggccacgcagggcgggcgtgtcaagacggactggtccaaggcgcccttcgtcgcgtcgta 334
Query: 756 ccgcgggtacgccgccaccgggtgcaccgcgccggacgccgccgcctgcgcgcgctccaa 815
|| |||||||||||| |||| ||||||||||| ||||||||||| ||||| | |||||
Sbjct: 333 ccaggggtacgccgccgccggctgcaccgcgcccgacgccgccgcgtgcgccaggtccaa 274
Query: 816 cggcgcatggatgtcgcaggagctcgacagcgccggccaggagcagctccgccgggcgca 875
|||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 273 cggcgcctggatgtcgcaggagctcgacagcgccgcgcaggggcagctccgccgggcgca 214
Query: 876 ggccagctacatgatctacaactactgcaccgataagtaccggttcccgcagggcccgcc 935
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 213 ggccagctacatgatctacaactactgcaccgataagtaccgcttcccgcagggaccgcc 154
Query: 936 gcccgagtgctcgtcgccggccaagtag 963
||||||||||||||||||||||||||||
Sbjct: 153 gcccgagtgctcgtcgccggccaagtag 126
Score = 52.0 bits (26), Expect = 1e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1048 tacggcataagttcggcggatatacgtata 1077
||||||||||||||||||||||||| ||||
Sbjct: 63 tacggcataagttcggcggatatacatata 34
>gb|BE352864.1|BE352864 LG1_267_G10.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 476
Score = 450 bits (227), Expect = e-124
Identities = 301/328 (91%)
Strand = Plus / Minus
Query: 636 gccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtg 695
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 455 gccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtgtgggacgccgaggagtg 396
Query: 696 ggccacgcannnnnnncgcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgta 755
||||||||| || ||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 395 ggccacgcagggcgggcgtgtcaagacggactggtccaaggcgcccttcgtcgcgtcgta 336
Query: 756 ccgcgggtacgccgccaccgggtgcaccgcgccggacgccgccgcctgcgcgcgctccaa 815
|| |||||||||||| |||| ||||||||||| ||||||||||| ||||| | |||||
Sbjct: 335 ccaggggtacgccgccgccggctgcaccgcgcccgacgccgccgcgtgcgccaggtccaa 276
Query: 816 cggcgcatggatgtcgcaggagctcgacagcgccggccaggagcagctccgccgggcgca 875
|||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 275 cggcgcctggatgtcgcaggagctcgacagcgccgcgcaggggcagctccgccgggcgca 216
Query: 876 ggccagctacatgatctacaactactgcaccgataagtaccggttcccgcagggcccgcc 935
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 215 ggccagctacatgatctacaactactgcaccgataagtaccgcttcccgcagggaccgcc 156
Query: 936 gcccgagtgctcgtcgccggccaagtag 963
||||||||||||||||||||||||||||
Sbjct: 155 gcccgagtgctcgtcgccggccaagtag 128
Score = 52.0 bits (26), Expect = 1e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1048 tacggcataagttcggcggatatacgtata 1077
||||||||||||||||||||||||| ||||
Sbjct: 65 tacggcataagttcggcggatatacatata 36
>gb|AW676674.1|AW676674 DG1_13_H08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 503
Score = 428 bits (216), Expect = e-118
Identities = 290/317 (91%)
Strand = Plus / Plus
Query: 647 cgtcgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggccacgcann 706
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 cgtcgcagccgatgcgggtgtacgccagcgtgtgggacgccgaggagtgggccacgcagg 60
Query: 707 nnnnncgcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgtaccgcgggtacg 766
|| ||| ||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 61 gcgggcgtgtcaagacggactggtccaaggcgcccttcgtcgcgtcgtaccaggggtacg 120
Query: 767 ccgccaccgggtgcaccgcgccggacgccgccgcctgcgcgcgctccaacggcgcatgga 826
||||| |||| ||||||||||| ||||||||||| ||||| | ||||||||||| ||||
Sbjct: 121 ccgccgccggctgcaccgcgcccgacgccgccgcgtgcgccaggtccaacggcgcctgga 180
Query: 827 tgtcgcaggagctcgacagcgccggccaggagcagctccgccgggcgcaggccagctaca 886
|||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 181 tgtcgcaggagctcgacagcgccgcgcaggggcagctccgccgggcgcaggccagctaca 240
Query: 887 tgatctacaactactgcaccgataagtaccggttcccgcagggcccgccgcccgagtgct 946
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 241 tgatctacaactactgcaccgataagtaccgcttcccgcagggaccgccgcccgagtgct 300
Query: 947 cgtcgccggccaagtag 963
|||||||||||||||||
Sbjct: 301 cgtcgccggccaagtag 317
Score = 52.0 bits (26), Expect = 1e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1048 tacggcataagttcggcggatatacgtata 1077
||||||||||||||||||||||||| ||||
Sbjct: 380 tacggcataagttcggcggatatacatata 409
>gb|CX621250.1|CX621250 GABR1_57_A12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_57_A12_A002 3', mRNA sequence
Length = 507
Score = 426 bits (215), Expect = e-117
Identities = 295/324 (91%)
Strand = Plus / Plus
Query: 640 ttcccgacgtcgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgggcc 699
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 1 ttcccgacgtcgcagccgatgcgggcgtacgccagcgtgtgggacgccgaggagtgggcc 60
Query: 700 acgcannnnnnncgcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgtaccgc 759
||||| || ||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 acgcagggcgggcgtgtcaagacggactggtccaaggcgcccttcgtcgcgtcgtaccag 120
Query: 760 gggtacgccgccaccgggtgcaccgcgccggacgccgccgcctgcgcgcgctccaacggc 819
|||||||||||| |||| ||||||||||| ||||||||||| ||||| | |||||||||
Sbjct: 121 gggtacgccgccgccggttgcaccgcgcccgacgccgccgcgtgcgccaggtccaacggc 180
Query: 820 gcatggatgtcgcaggagctcgacagcgccggccaggagcagctccgccgggcgcaggcc 879
|| |||||||||||||||||||||||||||| |||| |||| |||||||||||||||||
Sbjct: 181 gcctggatgtcgcaggagctcgacagcgccgcgcaggggcagttccgccgggcgcaggcc 240
Query: 880 agctacatgatctacaactactgcaccgataagtaccggttcccgcagggcccgccgccc 939
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 241 agctacatgatctacaactactgcaccgataagtaccgcttcccgcagggaccgccgccc 300
Query: 940 gagtgctcgtcgccggccaagtag 963
||||||||||||||||||||||||
Sbjct: 301 gagtgctcgtcgccggccaagtag 324
Score = 52.0 bits (26), Expect = 1e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1048 tacggcataagttcggcggatatacgtata 1077
||||||||||||||||||||||||| ||||
Sbjct: 387 tacggcataagttcggcggatatacatata 416
>gb|AW286800.2|AW286800 LG1_206_F03.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 500
Score = 422 bits (213), Expect = e-116
Identities = 357/402 (88%), Gaps = 11/402 (2%)
Strand = Plus / Plus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 103 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 162
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 163 gtcgc---cggcggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 219
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 220 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 279
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 280 gggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggtg 339
Query: 349 ccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcaggg-ttcgcagca 407
|| || ||||||||||||||||| |||||||||| || || |||||||| ||| ||
Sbjct: 340 ccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggcagcgc-cca 398
Query: 408 cgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacac 467
|||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 399 cgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacggtgcacac 458
Query: 468 gaacgtgtacagccaggggaagggcgggcgggagcagcagtt 509
|||||||||||||||||||| ||||||||||||||||||||
Sbjct: 459 caacgtgtacagccaggggaaaggcgggcgggagcagcagtt 500
>gb|AW286780.2|AW286780 LG1_206_D03.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 497
Score = 416 bits (210), Expect = e-114
Identities = 354/399 (88%), Gaps = 11/399 (2%)
Strand = Plus / Plus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 103 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 162
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 163 gtcgc---cggcggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 219
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 220 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 279
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 280 gggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggtg 339
Query: 349 ccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcaggg-ttcgcagca 407
|| || ||||||||||||||||| |||||||||| || || |||||||| ||| ||
Sbjct: 340 ccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggcagcgc-cca 398
Query: 408 cgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacac 467
|||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 399 cgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacggtgcacac 458
Query: 468 gaacgtgtacagccaggggaagggcgggcgggagcagca 506
|||||||||||||||||||| |||||||||||||||||
Sbjct: 459 caacgtgtacagccaggggaaaggcgggcgggagcagca 497
>gb|CW368566.1|CW368566 fsbb001f042j11k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f042j11, DNA
sequence
Length = 594
Score = 379 bits (191), Expect = e-103
Identities = 296/332 (89%), Gaps = 1/332 (0%)
Strand = Plus / Minus
Query: 458 cggtgcacacgaacgtgtacagccaggggaagggc-gggcgggagcagcagttccggatg 516
|||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 593 cggtgcacaccaacgtgtacagccaggggaaaggccgggcgggagcagcagttccggatg 534
Query: 517 tggttcgaccccacggcggccttccacgcctactccgtgctgtggaaccccgcccacgtc 576
|||||||||||||| |||| ||||||||||||||| ||||| |||||||| ||||| ||
Sbjct: 533 tggttcgaccccaccgcggacttccacgcctactcggtgctctggaacccttcccacatc 474
Query: 577 gtcttctacgtggacggcgtccccatccgggagttccggcgccgcggcgacgggaccgtg 636
||||| ||||| ||||||||||||||||| |||||||| ||||| |||||| | |||
Sbjct: 473 gtcttatacgtcgacggcgtccccatccgcgagttccgccgccgaaacgacggcgcggtg 414
Query: 637 ccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtgtgggacgcggaggagtgg 696
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 413 ccgttcccgacgtcgcagccgatgcgggtgtacgccagcgtgtgggacgccgaggagtgg 354
Query: 697 gccacgcannnnnnncgcgtccggaccgactggtccaaggcgcccttcgtcgcgtcgtac 756
|||||||| || ||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 353 gccacgcagggcgggcgtgtcaagacggactggtccaaggcgcccttcgtcgcgtcgtac 294
Query: 757 cgcgggtacgccgccaccgggtgcaccgcgcc 788
| |||||||||||| |||| |||||||||||
Sbjct: 293 caggggtacgccgccgccggctgcaccgcgcc 262
Score = 256 bits (129), Expect = 4e-066
Identities = 147/153 (96%)
Strand = Plus / Minus
Query: 811 tccaacggcgcatggatgtcgcaggagctcgacagcgccggccaggagcagctccgccgg 870
||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 238 tccaacggcgcctggatgtcgcaggagctcgacagcgccgcgcaggggcagctccgccgg 179
Query: 871 gcgcaggccagctacatgatctacaactactgcaccgataagtaccggttcccgcagggc 930
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 178 gcgcaggccagctacatgatctacaactactgcaccgataagtaccgcttcccgcaggga 119
Query: 931 ccgccgcccgagtgctcgtcgccggccaagtag 963
|||||||||||||||||||||||||||||||||
Sbjct: 118 ccgccgcccgagtgctcgtcgccggccaagtag 86
Score = 46.1 bits (23), Expect = 0.008
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1048 tacggcataagttcggcggatat 1070
|||||||||||||||||||||||
Sbjct: 23 tacggcataagttcggcggatat 1
>gb|BE356684.1|BE356684 DG1_12_C08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 472
Score = 373 bits (188), Expect = e-101
Identities = 329/373 (88%), Gaps = 11/373 (2%)
Strand = Plus / Plus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 104 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 163
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 164 gtcgc---cggcggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 220
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 221 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 280
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 281 gggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggtg 340
Query: 349 ccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcaggg-ttcgcagca 407
|| || ||||||||||||||||| |||||||||| || || |||||||| ||| ||
Sbjct: 341 ccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggcagcgc-cca 399
Query: 408 cgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacac 467
|||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 400 cgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacggtgcacac 459
Query: 468 gaacgtgtacagc 480
||||||||||||
Sbjct: 460 caacgtgtacagc 472
>gb|AW286094.2|AW286094 LG1_261_C11.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 473
Score = 367 bits (185), Expect = 2e-099
Identities = 326/370 (88%), Gaps = 11/370 (2%)
Strand = Plus / Plus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 108 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 167
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 168 gtcgc---cggcggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 224
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 225 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 284
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 285 gggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggtg 344
Query: 349 ccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcaggg-ttcgcagca 407
|| || ||||||||||||||||| |||||||||| || || |||||||| ||| ||
Sbjct: 345 ccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggcagcgc-cca 403
Query: 408 cgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacac 467
|||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 404 cgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacggtgcacac 463
Query: 468 gaacgtgtac 477
|||||||||
Sbjct: 464 caacgtgtac 473
>gb|BE367582.1|BE367582 PI1_9_H05.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 505
Score = 363 bits (183), Expect = 3e-098
Identities = 327/372 (87%), Gaps = 11/372 (2%)
Strand = Plus / Plus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 138 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 197
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 198 gtcgc---cggcggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 254
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 255 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 314
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 315 gggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggtg 374
Query: 349 ccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcaggg-ttcgcagca 407
|| || |||||| |||||||||| |||||||||| || || |||||||| ||| ||
Sbjct: 375 ccaggcaactccggcggcaccgtcaccaccttctacctctcctcgcagggcagcgc-cca 433
Query: 408 cgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacac 467
|||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 434 cgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacggtgcacac 493
Query: 468 gaacgtgtacag 479
|||||||||||
Sbjct: 494 caacgtgtacag 505
>gb|AW286797.2|AW286797 LG1_206_E11.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 479
Score = 357 bits (180), Expect = 2e-096
Identities = 324/369 (87%), Gaps = 11/369 (2%)
Strand = Plus / Plus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| ||||| |||||| |||| |||||| ||||||||||
Sbjct: 115 gctcccatgaagacgttggttctgtcggcggcgatgctgctactgctggtgcacggggga 174
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 175 gtcgc---cggcggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 231
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 232 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 291
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 292 gggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggtg 351
Query: 349 ccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcaggg-ttcgcagca 407
|| || ||||||||||||||||| |||||||||| || || |||||||| ||| ||
Sbjct: 352 ccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcagggcagcgc-cca 410
Query: 408 cgacgagatcgacttcgagttcctggggaacgcgagcggggagccgtacacggtgcacac 467
|||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 411 cgacgagatcgacttcgagttcctcggcaacgcgagcggagagccctacacggtgcacac 470
Query: 468 gaacgtgta 476
||||||||
Sbjct: 471 caacgtgta 479
>gb|BE367581.1|BE367581 PI1_9_H06.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 452
Score = 303 bits (153), Expect = 2e-080
Identities = 256/290 (88%), Gaps = 9/290 (3%)
Strand = Plus / Plus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 138 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 197
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 198 gtcgc---cggcggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 254
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 255 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 314
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 315 gggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggtg 374
Query: 349 ccgggggactccgccggcaccgtcgccaccttctatctttcgtcgcaggg 398
|| || ||||||||||||||||| |||||||||| || || ||||||||
Sbjct: 375 ccaggcaactccgccggcaccgtcaccaccttctacctctcctcgcaggg 424
>gb|BE125160.1|BE125160 DG1_13_H08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 391
Score = 297 bits (150), Expect = 1e-078
Identities = 244/275 (88%), Gaps = 9/275 (3%)
Strand = Plus / Plus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 109 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 168
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 169 gtcgc---cggcggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 225
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 226 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 285
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 286 gggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggtg 345
Query: 349 ccgggggactccgccggcaccgtcgccaccttcta 383
|| || ||||||||||||||||| ||||||||||
Sbjct: 346 ccaggcaactccgccggcaccgtcaccaccttcta 380
>gb|CL164386.1|CL164386 104_358_10807871_116_31815_239 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10807871, DNA
sequence
Length = 743
Score = 293 bits (148), Expect = 2e-077
Identities = 239/269 (88%), Gaps = 9/269 (3%)
Strand = Plus / Minus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 266 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 207
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 206 gtcgc---cggcggcggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 150
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 149 ggcaagatcctgaacaacgggcagctcctgacgctgtccatggacaggtcctccgggtcg 90
Query: 289 ggcttccagtccaaggcccagtacctctacggccgcttcgacatgcagctcaagctcgtc 348
|| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 89 gggttccagtccaagtcccagtacctctacggccgcttcgacatgcagctgaagctggta 30
Query: 349 ccgggggactccgccggcaccgtcgccac 377
||||| ||||||||||||||||| ||||
Sbjct: 29 ccgggcaactccgccggcaccgtcaccac 1
>gb|BE357377.1|BE357377 DG1_15_B01.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 549
Score = 194 bits (98), Expect = 1e-047
Identities = 137/150 (91%)
Strand = Plus / Plus
Query: 249 ccagctcctgacgctgtccatggacaggtcctccggctcgggcttccagtccaaggccca 308
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||
Sbjct: 395 ccagctcctgacgctgtccatggacaggtcctccgggtcggggttccagtccaagtccca 454
Query: 309 gtacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccggcac 368
|||||||||||||||||||||||||||||| ||||| || || || |||||||||||||
Sbjct: 455 gtacctctacggccgcttcgacatgcagctgaagctggtgccaggcaactccgccggcac 514
Query: 369 cgtcgccaccttctatctttcgtcgcaggg 398
|||| |||||||||| || || ||||||||
Sbjct: 515 cgtcaccaccttctacctctcctcgcaggg 544
>gb|BE597408.1|BE597408 PI1_69_B10.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 271
Score = 170 bits (86), Expect = 2e-040
Identities = 165/191 (86%), Gaps = 9/191 (4%)
Strand = Plus / Plus
Query: 115 gctcccatgaaggcgttgattctggcggcgg------tgctgctgctgcagcacggggga 168
|||||||||||| ||||| |||||||||||| |||| |||||| ||||||||||
Sbjct: 84 gctcccatgaagacgttggttctggcggcggcgatgctgctactgctggtgcacggggga 143
Query: 169 gccgcgagcgccggcggcaacttctaccaggacgtggacatcacctggggcgacggccgc 228
| || ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 144 gtcg---gcggcggtggcaacttctaccaggacgtggacatcacgtggggcgacggccgt 200
Query: 229 ggcaagatcctcgacaacggccagctcctgacgctgtccatggacaggtcctccggctcg 288
||||||||||| ||||||| |||||||||||||||| |||||||||||||| ||| |||
Sbjct: 201 ggcaagatcctgaacaacgggcagctcctgacgctgttcatggacaggtcctgcgggtcg 260
Query: 289 ggcttccagtc 299
|| ||||||||
Sbjct: 261 gggttccagtc 271
>gb|CL181052.1|CL181052 104_391_10896478_116_31928_238 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10896478, DNA
sequence
Length = 735
Score = 147 bits (74), Expect = 3e-033
Identities = 242/298 (81%)
Strand = Plus / Plus
Query: 269 tggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcg 328
|||||||| |||||||||| ||||||||||||||| || ||||||||| |||| |||
Sbjct: 315 tggacaggacctccggctccggcttccagtccaagtccgagtacctcttcggcaagatcg 374
Query: 329 acatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctatcttt 388
|||||||| ||||||| || || || |||| |||||||||||| |||||||||| || |
Sbjct: 375 acatgcagatcaagctggtgccaggcaactcggccggcaccgtcaccaccttctacctct 434
Query: 389 cgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcgggg 448
| ||||| || | |||||||||||||||||||||||||| || |||| ||| |
Sbjct: 435 cctcgcaaggccccacccacgacgagatcgacttcgagttcctcggcaacgtctccggcg 494
Query: 449 agccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcagt 508
|||| |||||| ||||||| ||||||| || | || ||||| ||| ||||||||||
Sbjct: 495 agccctacacgctgcacaccaacgtgttcaccggcggccagggccagcgcgagcagcagt 554
Query: 509 tccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaaccc 566
|||| | |||||||||||||| || ||||||| ||||||||||| ||||||||||
Sbjct: 555 tccgcctctggttcgaccccaccaaggacttccacacctactccgtggtgtggaaccc 612
>gb|BE359676.1|BE359676 DG1_56_H08.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 604
Score = 147 bits (74), Expect = 3e-033
Identities = 242/298 (81%)
Strand = Plus / Plus
Query: 269 tggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcg 328
|||||||| |||||||||| ||||||||||||||| || ||||||||| |||| |||
Sbjct: 278 tggacaggacctccggctccggcttccagtccaagtccgagtacctcttcggcaagatcg 337
Query: 329 acatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctatcttt 388
|||||||| ||||||| || || || |||| |||||||||||| |||||||||| || |
Sbjct: 338 acatgcagatcaagctggtgccaggcaactcggccggcaccgtcaccaccttctacctct 397
Query: 389 cgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcgggg 448
| ||||| || | |||||||||||||||||||||||||| || |||| ||| |
Sbjct: 398 cctcgcaaggccccacccacgacgagatcgacttcgagttcctcggcaacgtctccggcg 457
Query: 449 agccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcagt 508
|||| |||||| ||||||| ||||||| || | || ||||| ||| ||||||||||
Sbjct: 458 agccctacacgctgcacaccaacgtgttcaccggcggccagggccagcgcgagcagcagt 517
Query: 509 tccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaaccc 566
|||| | |||||||||||||| || ||||||| ||||||||||| ||||||||||
Sbjct: 518 tccgcctctggttcgaccccaccaaggacttccacacctactccgtggtgtggaaccc 575
>gb|BE361513.1|BE361513 DG1_81_C11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 604
Score = 147 bits (74), Expect = 3e-033
Identities = 242/298 (81%)
Strand = Plus / Plus
Query: 269 tggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcg 328
|||||||| |||||||||| ||||||||||||||| || ||||||||| |||| |||
Sbjct: 283 tggacaggacctccggctccggcttccagtccaagtccgagtacctcttcggcaagatcg 342
Query: 329 acatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctatcttt 388
|||||||| ||||||| || || || |||| |||||||||||| |||||||||| || |
Sbjct: 343 acatgcagatcaagctggtgccaggcaactcggccggcaccgtcaccaccttctacctct 402
Query: 389 cgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcgggg 448
| ||||| || | |||||||||||||||||||||||||| || |||| ||| |
Sbjct: 403 cctcgcaaggccccacccacgacgagatcgacttcgagttcctcggcaacgtctccggcg 462
Query: 449 agccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcagt 508
|||| |||||| ||||||| ||||||| || | || ||||| ||| ||||||||||
Sbjct: 463 agccctacacgctgcacaccaacgtgttcaccggcggccagggccagcgcgagcagcagt 522
Query: 509 tccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaaccc 566
|||| | |||||||||||||| || ||||||| ||||||||||| ||||||||||
Sbjct: 523 tccgcctctggttcgaccccaccaaggacttccacacctactccgtggtgtggaaccc 580
>gb|CD225020.1|CD225020 CCC1_37_A05.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_37_A05_A007 5', mRNA sequence
Length = 674
Score = 147 bits (74), Expect = 3e-033
Identities = 242/298 (81%)
Strand = Plus / Plus
Query: 269 tggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcg 328
|||||||| |||||||||| ||||||||||||||| || ||||||||| |||| |||
Sbjct: 292 tggacaggacctccggctccggcttccagtccaagtccgagtacctcttcggcaagatcg 351
Query: 329 acatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctatcttt 388
|||||||| ||||||| || || || |||| |||||||||||| |||||||||| || |
Sbjct: 352 acatgcagatcaagctggtgccaggcaactcggccggcaccgtcaccaccttctacctct 411
Query: 389 cgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcgggg 448
| ||||| || | |||||||||||||||||||||||||| || |||| ||| |
Sbjct: 412 cctcgcaaggccccacccacgacgagatcgacttcgagttcctcggcaacgtctccggcg 471
Query: 449 agccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcagt 508
|||| |||||| ||||||| ||||||| || | || ||||| ||| ||||||||||
Sbjct: 472 agccctacacgctgcacaccaacgtgttcaccggcggccagggccagcgcgagcagcagt 531
Query: 509 tccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaaccc 566
|||| | |||||||||||||| || ||||||| ||||||||||| ||||||||||
Sbjct: 532 tccgcctctggttcgaccccaccaaggacttccacacctactccgtggtgtggaaccc 589
>gb|BG159192.1|BG159192 RHIZ2_27_D08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 538
Score = 139 bits (70), Expect = 7e-031
Identities = 235/290 (81%)
Strand = Plus / Plus
Query: 186 caacttctaccaggacgtggacatcacctggggcgacggccgcggcaagatcctcgacaa 245
||||||| ||||||| | |||||||| ||||||||||| || |||||||||| |||||
Sbjct: 241 caacttcaaccaggagttcgacatcacgtggggcgacggtcgtggcaagatccaggacaa 300
Query: 246 cggccagctcctgacgctgtccatggacaggtcctccggctcgggcttccagtccaaggc 305
||| ||||| ||||||||| | ||||| || |||||||||| || |||||||||| |
Sbjct: 301 cgggcagctgctgacgctgacgctggaccggacctccggctccgggttccagtccaggca 360
Query: 306 ccagtacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccgg 365
| ||||||||| |||| ||||||||||||| ||||| ||||| || |||| |||||
Sbjct: 361 cgagtacctcttcggcaagatcgacatgcagctgaagctggtccccggcaactcggccgg 420
Query: 366 caccgtcgccaccttctatctttcgtcgcagggttcgcagcacgacgagatcgacttcga 425
||||||| || ||| ||| || ||||||||||| ||||||||||||||||||||
Sbjct: 421 caccgtcaccgcctactacctgtcgtcgcagggcaacacccacgacgagatcgacttcga 480
Query: 426 gttcctggggaacgcgagcggggagccgtacacggtgcacacgaacgtgt 475
|||||| || |||| ||| ||||| |||||| ||||||| |||||||
Sbjct: 481 gttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtgt 530
>gb|BG488141.1|BG488141 RHIZ2_60_A07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 608
Score = 139 bits (70), Expect = 7e-031
Identities = 241/298 (80%)
Strand = Plus / Plus
Query: 269 tggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcg 328
|||||| | |||||||||| ||||||||||||||| || ||||||||| |||| |||
Sbjct: 282 tggacaagacctccggctccggcttccagtccaagtccgagtacctcttcggcaagatcg 341
Query: 329 acatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctatcttt 388
|||||||| ||||||| || || || |||| |||||||||||| |||||||||| || |
Sbjct: 342 acatgcagatcaagctggtgcccggcaactcggccggcaccgtcaccaccttctacctct 401
Query: 389 cgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcgggg 448
| ||||| || | |||||||||||||||||||||||||| || |||| ||| |
Sbjct: 402 cctcgcaaggccccacccacgacgagatcgacttcgagttcctcggcaacgtctccggcg 461
Query: 449 agccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcagt 508
|||| |||||| ||||||| ||||||| || | || ||||| ||| ||||||||||
Sbjct: 462 agccctacacgctgcacaccaacgtgttcaccggcggccagggccagcgcgagcagcagt 521
Query: 509 tccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaaccc 566
|||| | |||||||||||||| || ||||||| ||||||||||| ||||||||||
Sbjct: 522 tccgcctctggttcgaccccaccaaggacttccacacctactccgtggtgtggaaccc 579
>gb|BG488213.1|BG488213 RHIZ2_60_H06.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 589
Score = 139 bits (70), Expect = 7e-031
Identities = 241/298 (80%)
Strand = Plus / Plus
Query: 269 tggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcg 328
|||||| | |||||||||| ||||||||||||||| || ||||||||| |||| |||
Sbjct: 273 tggacaagacctccggctccggcttccagtccaagtccgagtacctcttcggcaagatcg 332
Query: 329 acatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctatcttt 388
|||||||| ||||||| || || || |||| |||||||||||| |||||||||| || |
Sbjct: 333 acatgcagatcaagctggtgcccggcaactcggccggcaccgtcaccaccttctacctct 392
Query: 389 cgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcgggg 448
| ||||| || | |||||||||||||||||||||||||| || |||| ||| |
Sbjct: 393 cctcgcaaggccccacccacgacgagatcgacttcgagttcctcggcaacgtctccggcg 452
Query: 449 agccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcagt 508
|||| |||||| ||||||| ||||||| || | || ||||| ||| ||||||||||
Sbjct: 453 agccctacacgctgcacaccaacgtgttcaccggcggccagggccagcgcgagcagcagt 512
Query: 509 tccggatgtggttcgaccccacggcggccttccacgcctactccgtgctgtggaaccc 566
|||| | |||||||||||||| || ||||||| ||||||||||| ||||||||||
Sbjct: 513 tccgcctctggttcgaccccaccaaggacttccacacctactccgtggtgtggaaccc 570
>gb|CL197332.1|CL197332 104_424_10943679_116_32337_060 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943679, DNA
sequence
Length = 636
Score = 133 bits (67), Expect = 4e-029
Identities = 262/327 (80%)
Strand = Plus / Plus
Query: 186 caacttctaccaggacgtggacatcacctggggcgacggccgcggcaagatcctcgacaa 245
||||||| ||||||| | |||||||| ||||||||||| || |||||||||| |||||
Sbjct: 93 caacttcaaccaggagttcgacatcacgtggggcgacggtcgtggcaagatccaggacaa 152
Query: 246 cggccagctcctgacgctgtccatggacaggtcctccggctcgggcttccagtccaaggc 305
||| ||||| ||||||||| | ||||| || ||||||| || || |||||||||| |
Sbjct: 153 cgggcagctgctgacgctgacgctggaccggacctccgggtccgggttccagtccaggca 212
Query: 306 ccagtacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccgg 365
| ||||||||| |||| ||||||||||||| ||||| ||||| || |||| |||||
Sbjct: 213 cgagtacctcttcggcaagatcgacatgcagctgaagctggtccccggcaactcggccgg 272
Query: 366 caccgtcgccaccttctatctttcgtcgcagggttcgcagcacgacgagatcgacttcga 425
||||||| || ||| ||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 273 caccgtcaccgcctactacctgtcgtcgcagggcaacacccacgatgagatcgacttcga 332
Query: 426 gttcctggggaacgcgagcggggagccgtacacggtgcacacgaacgtgtacagccaggg 485
|||||| || |||| ||| ||||| |||||| ||||||| ||||||| || ||||||
Sbjct: 333 gttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtgttcacccaggg 392
Query: 486 gaagggcgggcgggagcagcagttccg 512
|||| | ||||||||||||||||
Sbjct: 393 ccagggacagagggagcagcagttccg 419
>gb|CW038953.1|CW038953 104_271_10505213_115_30388 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10505213, DNA
sequence
Length = 732
Score = 133 bits (67), Expect = 4e-029
Identities = 242/299 (80%), Gaps = 1/299 (0%)
Strand = Plus / Plus
Query: 269 tggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcg 328
|||||||| |||||||||| ||||||||||||||| || ||||||||| |||| |||
Sbjct: 387 tggacaggacctccggctccggcttccagtccaagtccgagtacctcttcggcaagatcg 446
Query: 329 acatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctatcttt 388
|||||||| ||||||| || || || |||| |||||||||||| |||||||||| || |
Sbjct: 447 acatgcagatcaagctggtgccaggcaactcggccggcaccgtcaccaccttctacctct 506
Query: 389 cgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcgggg 448
| ||||| || | |||||||||||||||||||||||||| || |||| ||| |
Sbjct: 507 cctcgcaaggccccacccacgacgagatcgacttcgagttcctcggcaacgtctccggcg 566
Query: 449 agccgtacacggtgcacacgaacgtgtacagccaggggaagggcgggcgggagcagcagt 508
|||| |||||| ||||||| ||||||| || | || ||||| ||| ||||||||||
Sbjct: 567 agccctacacgctgcacaccaacgtgttcaccggcggccagggccagcgcgagcagcagt 626
Query: 509 tccggatgtggttcgaccccacggcggccttccacgcctact-ccgtgctgtggaaccc 566
|||| | |||||||||||||| || ||||||| |||||| ||||| ||||||||||
Sbjct: 627 tccgcctctggttcgaccccaccaaggacttccacacctactcccgtggtgtggaaccc 685
>gb|CW304769.1|CW304769 104_789_11465956_148_35706_002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11465956, DNA
sequence
Length = 622
Score = 133 bits (67), Expect = 4e-029
Identities = 262/327 (80%)
Strand = Plus / Minus
Query: 186 caacttctaccaggacgtggacatcacctggggcgacggccgcggcaagatcctcgacaa 245
||||||| ||||||| | |||||||| ||||||||||| || |||||||||| |||||
Sbjct: 352 caacttcaaccaggagttcgacatcacgtggggcgacggtcgtggcaagatccaggacaa 293
Query: 246 cggccagctcctgacgctgtccatggacaggtcctccggctcgggcttccagtccaaggc 305
||| ||||| ||||||||| | ||||| || ||||||| || || |||||||||| |
Sbjct: 292 cgggcagctgctgacgctgacgctggaccggacctccgggtccgggttccagtccaggca 233
Query: 306 ccagtacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccgg 365
| ||||||||| |||| ||||||||||||| ||||| ||||| || |||| |||||
Sbjct: 232 cgagtacctcttcggcaagatcgacatgcagctgaagctggtccccggcaactcggccgg 173
Query: 366 caccgtcgccaccttctatctttcgtcgcagggttcgcagcacgacgagatcgacttcga 425
||||||| || ||| ||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 172 caccgtcaccgcctactacctgtcgtcgcagggcaacacccacgatgagatcgacttcga 113
Query: 426 gttcctggggaacgcgagcggggagccgtacacggtgcacacgaacgtgtacagccaggg 485
|||||| || |||| ||| ||||| |||||| ||||||| ||||||| || ||||||
Sbjct: 112 gttcctcggcaacgtctccggcgagccctacacgctgcacaccaacgtgttcacccaggg 53
Query: 486 gaagggcgggcgggagcagcagttccg 512
|||| | ||||||||||||||||
Sbjct: 52 ccagggacagagggagcagcagttccg 26
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 474,998
Number of Sequences: 832831
Number of extensions: 474998
Number of successful extensions: 163913
Number of sequences better than 0.5: 377
Number of HSP's better than 0.5 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 162323
Number of HSP's gapped (non-prelim): 1306
length of query: 1223
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1203
effective length of database: 474,703,049
effective search space: 571067767947
effective search space used: 571067767947
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)