BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4573929.2.1
(691 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE595856.1|BE595856 PI1_49_B01.g1_A002 Pathogen induced ... 440 e-122
gb|BE596303.1|BE596303 PI1_49_B01.b1_A002 Pathogen induced ... 440 e-122
gb|BG412608.1|BG412608 OV2_36_E11.g1_A002 Ovary 2 (OV2) Sor... 440 e-122
gb|BM329727.1|BM329727 PIC1_42_D10.g1_A002 Pathogen-infecte... 440 e-122
gb|CD207555.1|CD207555 HS1_33_D05.b1_A012 Heat-shocked seed... 440 e-122
gb|CD207816.1|CD207816 HS1_35_H08.b1_A012 Heat-shocked seed... 440 e-122
gb|CD224789.1|CD224789 CCC1_36_H11.b1_A007 Callus culture/c... 440 e-122
gb|CF760577.1|CF760577 DSAF1_63_A10.b1_A011 Drought-stresse... 440 e-122
gb|CX615956.1|CX615956 GABR1_25_A05.b1_A002 GA- or brassino... 440 e-122
gb|CB928908.1|CB928908 ABA1_38_A08.b1_A012 Abscisic acid-tr... 432 e-119
gb|CD203981.1|CD203981 HS1_3_B06.b1_A012 Heat-shocked seedl... 432 e-119
gb|CD207954.1|CD207954 HS1_36_D12.b1_A012 Heat-shocked seed... 432 e-119
gb|CD220465.1|CD220465 CCC1_67_A10.b1_A007 Callus culture/c... 432 e-119
gb|CD432110.1|CD432110 ETH1_26_G11.b1_A002 Ethylene-treated... 432 e-119
gb|CD208815.1|CD208815 HS1_44_A11.b1_A012 Heat-shocked seed... 424 e-117
gb|CD209959.1|CD209959 HS1_56_C07.b1_A012 Heat-shocked seed... 424 e-117
gb|CN147179.1|CN147179 WOUND1_48_D07.b1_A002 Wounded leaves... 424 e-117
gb|CN149951.1|CN149951 WOUND1_66_A06.b1_A002 Wounded leaves... 424 e-117
gb|CX620652.1|CX620652 GABR1_53_D12.b1_A002 GA- or brassino... 424 e-117
gb|CN149638.1|CN149638 WOUND1_64_B06.b1_A002 Wounded leaves... 416 e-114
gb|BE601384.1|BE601384 PI1_92_C10.g1_A002 Pathogen induced ... 410 e-113
gb|CD233292.1|CD233292 SS1_13_A05.b1_A012 Salt-stressed see... 408 e-112
gb|BG559776.1|BG559776 RHIZ2_73_E06.g1_A003 Rhizome2 (RHIZ2... 406 e-111
gb|BG559745.1|BG559745 RHIZ2_73_B06.g1_A003 Rhizome2 (RHIZ2... 398 e-109
gb|CD204028.1|CD204028 HS1_3_G02.b1_A012 Heat-shocked seedl... 392 e-107
gb|CD212197.1|CD212197 HS1_71_G10.b1_A012 Heat-shocked seed... 392 e-107
gb|CF427003.1|CF427003 PH1_3_F11.b1_A002 Phosphorous-defici... 392 e-107
gb|CD207497.1|CD207497 HS1_33_C08.b1_A012 Heat-shocked seed... 391 e-107
gb|CD204161.1|CD204161 HS1_4_G11.b1_A012 Heat-shocked seedl... 377 e-103
gb|CD207647.1|CD207647 HS1_34_G09.b1_A012 Heat-shocked seed... 359 2e-097
gb|CD231108.1|CD231108 SS1_8_B03.b1_A012 Salt-stressed seed... 359 2e-097
gb|CF772017.1|CF772017 DSBF1_27_H03.g9_A010 Drought-stresse... 359 2e-097
gb|AW680990.1|AW680990 WS1_9_G07.b1_A002 Water-stressed 1 (... 337 8e-091
gb|CF757382.1|CF757382 DSAF1_17_C03.g1_A011 Drought-stresse... 333 1e-089
gb|CF771531.1|CF771531 DSBF1_20_F08.g1_A010 Drought-stresse... 256 2e-066
gb|AW747778.1|AW747778 WS1_76_G10.g1_A002 Water-stressed 1 ... 248 6e-064
gb|AW925213.1|AW925213 WS1_76_G10.b1_A002 Water-stressed 1 ... 248 6e-064
gb|CN151584.1|CN151584 WOUND1_76_H02.b1_A002 Wounded leaves... 178 4e-043
gb|AW681149.1|AW681149 WS1_9_G07.g1_A002 Water-stressed 1 (... 176 2e-042
gb|CN151674.1|CN151674 WOUND1_76_H02.g1_A002 Wounded leaves... 176 2e-042
gb|CX620511.1|CX620511 GABR1_52_G02.b1_A002 GA- or brassino... 147 2e-033
gb|CW135125.1|CW135125 104_519_11117679_116_34828_054 Sorgh... 135 6e-030
gb|CW135126.1|CW135126 104_519_11117679_148_34824_054 Sorgh... 135 6e-030
gb|CW143126.1|CW143126 104_534_11137243_116_34950_068 Sorgh... 135 6e-030
gb|CW114055.1|CW114055 104_488_11105786_116_34560_005 Sorgh... 131 9e-029
gb|CW466008.1|CW466008 fsbb001f217a21f0 Sorghum methylation... 129 4e-028
gb|CF772247.1|CF772247 DSBF1_31_B12.g1_A010 Drought-stresse... 129 4e-028
gb|CW143127.1|CW143127 104_534_11137243_148_34946_068 Sorgh... 127 1e-027
gb|CW114056.1|CW114056 104_488_11105786_148_34564_005 Sorgh... 80 3e-013
gb|CF756365.1|CF756365 DSAF1_5_D07.b1_A011 Drought-stressed... 80 3e-013
gb|CF756453.1|CF756453 DSAF1_5_D07.g1_A011 Drought-stressed... 80 3e-013
gb|CF757556.1|CF757556 DSAF1_19_D09.g1_A011 Drought-stresse... 80 3e-013
gb|CF760411.1|CF760411 DSAF1_60_D03.b1_A011 Drought-stresse... 80 3e-013
gb|CF760412.1|CF760412 DSAF1_60_D04.b1_A011 Drought-stresse... 80 3e-013
gb|CF760415.1|CF760415 DSAF1_60_E03.b1_A011 Drought-stresse... 80 3e-013
gb|CW441646.1|CW441646 fsbb001f160o10f0 Sorghum methylation... 78 1e-012
gb|CB929088.1|CB929088 ABA1_39_H11.b1_A012 Abscisic acid-tr... 64 2e-008
gb|CF489143.1|CF489143 POL1_55_A05.b1_A002 Pollen Sorghum b... 54 2e-005
gb|CW410330.1|CW410330 fsbb001f105a14k0 Sorghum methylation... 52 7e-005
gb|CW491537.1|CW491537 fsbb001f281h03k0 Sorghum methylation... 52 7e-005
gb|CW493811.1|CW493811 fsbb001f284m09f0 Sorghum methylation... 52 7e-005
gb|CW493812.1|CW493812 fsbb001f284m09k0 Sorghum methylation... 52 7e-005
gb|BG933185.1|BG933185 WS1_91_C08.g1_A002 Water-stressed 1 ... 52 7e-005
gb|CF485354.1|CF485354 POL1_31_B06.b1_A002 Pollen Sorghum b... 52 7e-005
gb|AW680024.1|AW680024 WS1_34_G12.g1_A002 Water-stressed 1 ... 48 0.001
>gb|BE595856.1|BE595856 PI1_49_B01.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 601
Score = 440 bits (222), Expect = e-122
Identities = 306/334 (91%)
Strand = Plus / Plus
Query: 55 atagcagccctgaggaagctctacgaagactccgacaaaataggctgtgaagtgtacaac 114
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 55 atagcagccctaaggaagctctatgaagactccgacaaaataggatgtgaagtatacaac 114
Query: 115 ttggggactggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttct 174
||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||
Sbjct: 115 ctggggacaggaaaggggacatcggtgttggaaatggtggctgcattcgagaaggtttct 174
Query: 175 gggaagaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctac 234
|||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 175 gggaagaaaatcccactggtgtttgctgggcgaagacctggagacgcagagatcgtctat 234
Query: 235 gccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggag 294
||||||||||||||||||||||| || |||||||||||||| || |||||||||||||||
Sbjct: 235 gccgcaactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggag 294
Query: 295 atgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgc 354
|||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| ||||
Sbjct: 295 atgtgcagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaa 354
Query: 355 gacaacagcaaatgaaccacccatccatgcatcc 388
|||||| ||||||||| |||| ||||||||||||
Sbjct: 355 gacaacggcaaatgaatcaccgatccatgcatcc 388
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 472 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 531
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 532 gaggagtaggggggtc 547
>gb|BE596303.1|BE596303 PI1_49_B01.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 526
Score = 440 bits (222), Expect = e-122
Identities = 306/334 (91%)
Strand = Plus / Plus
Query: 55 atagcagccctgaggaagctctacgaagactccgacaaaataggctgtgaagtgtacaac 114
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 55 atagcagccctaaggaagctctatgaagactccgacaaaataggatgtgaagtatacaac 114
Query: 115 ttggggactggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttct 174
||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||
Sbjct: 115 ctggggacaggaaaggggacatcggtgttggaaatggtggctgcattcgagaaggtttct 174
Query: 175 gggaagaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctac 234
|||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 175 gggaagaaaatcccactggtgtttgctgggcgaagacctggagacgcagagatcgtctat 234
Query: 235 gccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggag 294
||||||||||||||||||||||| || |||||||||||||| || |||||||||||||||
Sbjct: 235 gccgcaactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggag 294
Query: 295 atgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgc 354
|||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| ||||
Sbjct: 295 atgtgcagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaa 354
Query: 355 gacaacagcaaatgaaccacccatccatgcatcc 388
|||||| ||||||||| |||| ||||||||||||
Sbjct: 355 gacaacggcaaatgaatcaccgatccatgcatcc 388
Score = 46.1 bits (23), Expect = 0.004
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtat 551
|||| ||||||||| |||||||| | |||||||||||||| ||||||| |||||
Sbjct: 472 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtat 526
>gb|BG412608.1|BG412608 OV2_36_E11.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 620
Score = 440 bits (222), Expect = e-122
Identities = 306/334 (91%)
Strand = Plus / Plus
Query: 55 atagcagccctgaggaagctctacgaagactccgacaaaataggctgtgaagtgtacaac 114
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 69 atagcagccctaaggaagctctatgaagactccgacaaaataggatgtgaagtatacaac 128
Query: 115 ttggggactggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttct 174
||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||
Sbjct: 129 ctggggacaggaaaggggacatcggtgttggaaatggtggctgcattcgagaaggtttct 188
Query: 175 gggaagaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctac 234
|||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 189 gggaagaaaatcccactggtgtttgctgggcgaagacctggagacgcagagatcgtctat 248
Query: 235 gccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggag 294
||||||||||||||||||||||| || |||||||||||||| || |||||||||||||||
Sbjct: 249 gccgcaactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggag 308
Query: 295 atgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgc 354
|||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| ||||
Sbjct: 309 atgtgcagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaa 368
Query: 355 gacaacagcaaatgaaccacccatccatgcatcc 388
|||||| ||||||||| |||| ||||||||||||
Sbjct: 369 gacaacggcaaatgaatcaccgatccatgcatcc 402
Score = 77.8 bits (39), Expect = 1e-012
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 486 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 545
Query: 557 gaggaggaggggggt 571
|||||| ||||||||
Sbjct: 546 gaggagtaggggggt 560
>gb|BM329727.1|BM329727 PIC1_42_D10.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 651
Score = 440 bits (222), Expect = e-122
Identities = 306/334 (91%)
Strand = Plus / Plus
Query: 55 atagcagccctgaggaagctctacgaagactccgacaaaataggctgtgaagtgtacaac 114
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 35 atagcagccctaaggaagctctatgaagactccgacaaaataggatgtgaagtatacaac 94
Query: 115 ttggggactggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttct 174
||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||
Sbjct: 95 ctggggacaggaaaggggacatcggtgttggaaatggtggctgcattcgagaaggtttct 154
Query: 175 gggaagaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctac 234
|||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 155 gggaagaaaatcccactggtgtttgctgggcgaagacctggagacgcagagatcgtctat 214
Query: 235 gccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggag 294
||||||||||||||||||||||| || |||||||||||||| || |||||||||||||||
Sbjct: 215 gccgcaactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggag 274
Query: 295 atgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgc 354
|||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| ||||
Sbjct: 275 atgtgcagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaa 334
Query: 355 gacaacagcaaatgaaccacccatccatgcatcc 388
|||||| ||||||||| |||| ||||||||||||
Sbjct: 335 gacaacggcaaatgaatcaccgatccatgcatcc 368
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 452 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 511
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 512 gaggagtaggggggtc 527
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 600 catggttggttgctagaaaaggaataa 626
>gb|CD207555.1|CD207555 HS1_33_D05.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_33_D05_A012 3', mRNA sequence
Length = 653
Score = 440 bits (222), Expect = e-122
Identities = 306/334 (91%)
Strand = Plus / Plus
Query: 55 atagcagccctgaggaagctctacgaagactccgacaaaataggctgtgaagtgtacaac 114
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 38 atagcagccctaaggaagctctatgaagactccgacaaaataggatgtgaagtatacaac 97
Query: 115 ttggggactggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttct 174
||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||
Sbjct: 98 ctggggacaggaaaggggacatcggtgttggaaatggtggctgcattcgagaaggtttct 157
Query: 175 gggaagaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctac 234
|||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 158 gggaagaaaatcccactggtgtttgctgggcgaagacctggagacgcagagatcgtctat 217
Query: 235 gccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggag 294
||||||||||||||||||||||| || |||||||||||||| || |||||||||||||||
Sbjct: 218 gccgcaactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggag 277
Query: 295 atgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgc 354
|||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| ||||
Sbjct: 278 atgtgcagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaa 337
Query: 355 gacaacagcaaatgaaccacccatccatgcatcc 388
|||||| ||||||||| |||| ||||||||||||
Sbjct: 338 gacaacggcaaatgaatcaccgatccatgcatcc 371
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 455 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 514
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 515 gaggagtaggggggtc 530
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 603 catggttggttgctagaaaaggaataa 629
>gb|CD207816.1|CD207816 HS1_35_H08.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_35_H08_A012 3', mRNA sequence
Length = 613
Score = 440 bits (222), Expect = e-122
Identities = 306/334 (91%)
Strand = Plus / Plus
Query: 55 atagcagccctgaggaagctctacgaagactccgacaaaataggctgtgaagtgtacaac 114
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 36 atagcagccctaaggaagctctatgaagactccgacaaaataggatgtgaagtatacaac 95
Query: 115 ttggggactggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttct 174
||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||
Sbjct: 96 ctggggacaggaaaggggacatcggtgttggaaatggtggctgcattcgagaaggtttct 155
Query: 175 gggaagaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctac 234
|||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 156 gggaagaaaatcccactggtgtttgctgggcgaagacctggagacgcagagatcgtctat 215
Query: 235 gccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggag 294
||||||||||||||||||||||| || |||||||||||||| || |||||||||||||||
Sbjct: 216 gccgcaactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggag 275
Query: 295 atgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgc 354
|||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| ||||
Sbjct: 276 atgtgcagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaa 335
Query: 355 gacaacagcaaatgaaccacccatccatgcatcc 388
|||||| ||||||||| |||| ||||||||||||
Sbjct: 336 gacaacggcaaatgaatcaccgatccatgcatcc 369
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 453 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 512
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 513 gaggagtaggggggtc 528
>gb|CD224789.1|CD224789 CCC1_36_H11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_36_H11_A007 3', mRNA sequence
Length = 660
Score = 440 bits (222), Expect = e-122
Identities = 306/334 (91%)
Strand = Plus / Plus
Query: 55 atagcagccctgaggaagctctacgaagactccgacaaaataggctgtgaagtgtacaac 114
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 36 atagcagccctaaggaagctctatgaagactccgacaaaataggatgtgaagtatacaac 95
Query: 115 ttggggactggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttct 174
||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||
Sbjct: 96 ctggggacaggaaaggggacatcggtgttggaaatggtggctgcattcgagaaggtttct 155
Query: 175 gggaagaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctac 234
|||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 156 gggaagaaaatcccactggtgtttgctgggcgaagacctggagacgcagagatcgtctat 215
Query: 235 gccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggag 294
||||||||||||||||||||||| || |||||||||||||| || |||||||||||||||
Sbjct: 216 gccgcaactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggag 275
Query: 295 atgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgc 354
|||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| ||||
Sbjct: 276 atgtgcagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaa 335
Query: 355 gacaacagcaaatgaaccacccatccatgcatcc 388
|||||| ||||||||| |||| ||||||||||||
Sbjct: 336 gacaacggcaaatgaatcaccgatccatgcatcc 369
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 453 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 512
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 513 gaggagtaggggggtc 528
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 601 catggttggttgctagaaaaggaataa 627
>gb|CF760577.1|CF760577 DSAF1_63_A10.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_63_A10_A011 5', mRNA sequence
Length = 458
Score = 440 bits (222), Expect = e-122
Identities = 306/334 (91%)
Strand = Plus / Plus
Query: 55 atagcagccctgaggaagctctacgaagactccgacaaaataggctgtgaagtgtacaac 114
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 29 atagcagccctaaggaagctctatgaagactccgacaaaataggatgtgaagtatacaac 88
Query: 115 ttggggactggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttct 174
||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||
Sbjct: 89 ctggggacaggaaaggggacatcggtgttggaaatggtggctgcattcgagaaggtttct 148
Query: 175 gggaagaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctac 234
|||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 149 gggaagaaaatcccactggtgtttgctgggcgaagacctggagacgcagagatcgtctat 208
Query: 235 gccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggag 294
||||||||||||||||||||||| || |||||||||||||| || |||||||||||||||
Sbjct: 209 gccgcaactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggag 268
Query: 295 atgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgc 354
|||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| ||||
Sbjct: 269 atgtgcagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaa 328
Query: 355 gacaacagcaaatgaaccacccatccatgcatcc 388
|||||| ||||||||| |||| ||||||||||||
Sbjct: 329 gacaacggcaaatgaatcaccgatccatgcatcc 362
>gb|CX615956.1|CX615956 GABR1_25_A05.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_25_A05_A002 3', mRNA sequence
Length = 719
Score = 440 bits (222), Expect = e-122
Identities = 306/334 (91%)
Strand = Plus / Plus
Query: 55 atagcagccctgaggaagctctacgaagactccgacaaaataggctgtgaagtgtacaac 114
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 108 atagcagccctaaggaagctctatgaagactccgacaaaataggatgtgaagtatacaac 167
Query: 115 ttggggactggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttct 174
||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||
Sbjct: 168 ctggggacaggaaaggggacatcggtgttggaaatggtggctgcattcgagaaggtttct 227
Query: 175 gggaagaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctac 234
|||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 228 gggaagaaaatcccactggtgtttgctgggcgaagacctggagacgcagagatcgtctat 287
Query: 235 gccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggag 294
||||||||||||||||||||||| || |||||||||||||| || |||||||||||||||
Sbjct: 288 gccgcaactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggag 347
Query: 295 atgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgc 354
|||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| ||||
Sbjct: 348 atgtgcagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaa 407
Query: 355 gacaacagcaaatgaaccacccatccatgcatcc 388
|||||| ||||||||| |||| ||||||||||||
Sbjct: 408 gacaacggcaaatgaatcaccgatccatgcatcc 441
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 525 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 584
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 585 gaggagtaggggggtc 600
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 673 catggttggttgctagaaaaggaataa 699
>gb|CB928908.1|CB928908 ABA1_38_A08.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_38_A08_A012 3', mRNA sequence
Length = 690
Score = 432 bits (218), Expect = e-119
Identities = 305/334 (91%)
Strand = Plus / Plus
Query: 55 atagcagccctgaggaagctctacgaagactccgacaaaataggctgtgaagtgtacaac 114
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 78 atagcagccctaaggaagctctatgaagactccgacaaaataggatgtgaagtatacaac 137
Query: 115 ttggggactggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttct 174
||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||
Sbjct: 138 ctggggacaggaaaggggacatcggtgttggaaatggtggctgcattcgagaaggtttct 197
Query: 175 gggaagaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctac 234
|||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 198 gggaagaaaatcccactggtgtttgctgggcgaagacctggagacgcagagatcgtctat 257
Query: 235 gccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggag 294
||||||||||||||||||||||| || |||||||||||||| | |||||||||||||||
Sbjct: 258 gccgcaactgccaaggcagagaaagatctcaaatggaaggcaagatacgggatcgaggag 317
Query: 295 atgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgc 354
|||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| ||||
Sbjct: 318 atgtgcagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaa 377
Query: 355 gacaacagcaaatgaaccacccatccatgcatcc 388
|||||| ||||||||| |||| ||||||||||||
Sbjct: 378 gacaacggcaaatgaatcaccgatccatgcatcc 411
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 495 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 554
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 555 gaggagtaggggggtc 570
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 643 catggttggttgctagaaaaggaataa 669
>gb|CD203981.1|CD203981 HS1_3_B06.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_3_B06_A012 3', mRNA sequence
Length = 672
Score = 432 bits (218), Expect = e-119
Identities = 305/334 (91%)
Strand = Plus / Plus
Query: 55 atagcagccctgaggaagctctacgaagactccgacaaaataggctgtgaagtgtacaac 114
||||||||| | ||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 59 atagcagccttaaggaagctctatgaagactccgacaaaataggatgtgaagtatacaac 118
Query: 115 ttggggactggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttct 174
||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||
Sbjct: 119 ctggggacaggaaaggggacatcggtgttggaaatggtggctgcattcgagaaggtttct 178
Query: 175 gggaagaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctac 234
|||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 179 gggaagaaaatcccactggtgtttgctgggcgaagacctggagacgcagagatcgtctat 238
Query: 235 gccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggag 294
||||||||||||||||||||||| || |||||||||||||| || |||||||||||||||
Sbjct: 239 gccgcaactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggag 298
Query: 295 atgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgc 354
|||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| ||||
Sbjct: 299 atgtgcagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaa 358
Query: 355 gacaacagcaaatgaaccacccatccatgcatcc 388
|||||| ||||||||| |||| ||||||||||||
Sbjct: 359 gacaacggcaaatgaatcaccgatccatgcatcc 392
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 476 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 535
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 536 gaggagtaggggggtc 551
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 624 catggttggttgctagaaaaggaataa 650
>gb|CD207954.1|CD207954 HS1_36_D12.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_36_D12_A012 3', mRNA sequence
Length = 687
Score = 432 bits (218), Expect = e-119
Identities = 305/334 (91%)
Strand = Plus / Plus
Query: 55 atagcagccctgaggaagctctacgaagactccgacaaaataggctgtgaagtgtacaac 114
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 78 atagcagccctaaggaagctctatgaagactccgacaaaataggatgtgaagtatacaac 137
Query: 115 ttggggactggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttct 174
||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||
Sbjct: 138 ctggggacaggaaaggggacatcggtgttggaaatggtggctgcattcgagaaggtttct 197
Query: 175 gggaagaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctac 234
|||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 198 gggaagaaaatcccactggtgtttgctgggcgaagacctggagacgcagagatcgtctat 257
Query: 235 gccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggag 294
||||||||||||||||||||||| || |||||||||||||| || ||||||||| |||||
Sbjct: 258 gccgcaactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatctaggag 317
Query: 295 atgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgc 354
|||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| ||||
Sbjct: 318 atgtgcagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaa 377
Query: 355 gacaacagcaaatgaaccacccatccatgcatcc 388
|||||| ||||||||| |||| ||||||||||||
Sbjct: 378 gacaacggcaaatgaatcaccgatccatgcatcc 411
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 495 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 554
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 555 gaggagtaggggggtc 570
>gb|CD220465.1|CD220465 CCC1_67_A10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_67_A10_A007 3', mRNA sequence
Length = 650
Score = 432 bits (218), Expect = e-119
Identities = 305/334 (91%)
Strand = Plus / Plus
Query: 55 atagcagccctgaggaagctctacgaagactccgacaaaataggctgtgaagtgtacaac 114
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 37 atagcagccctaaggaagctctatgaagactccgacaaaataggatgtgaagtatacaac 96
Query: 115 ttggggactggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttct 174
||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||
Sbjct: 97 ctggggacaggaaaggggacatcggtgttggaaatggtggctgcattcgagaaggtttct 156
Query: 175 gggaagaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctac 234
|||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 157 gggaagaaaatcccactggtgtttgctgggcgaagacctggagacgcagagatcgtctat 216
Query: 235 gccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggag 294
||||||||||||||||||||||| || |||||||||||||| || |||||||||||||||
Sbjct: 217 gccgcaactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggag 276
Query: 295 atgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgc 354
|||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| ||||
Sbjct: 277 atgtgcagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaa 336
Query: 355 gacaacagcaaatgaaccacccatccatgcatcc 388
| |||| ||||||||| |||| ||||||||||||
Sbjct: 337 gtcaacggcaaatgaatcaccgatccatgcatcc 370
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 454 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 513
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 514 gaggagtaggggggtc 529
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 602 catggttggttgctagaaaaggaataa 628
>gb|CD432110.1|CD432110 ETH1_26_G11.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_26_G11_A002 3', mRNA sequence
Length = 674
Score = 432 bits (218), Expect = e-119
Identities = 305/334 (91%)
Strand = Plus / Plus
Query: 55 atagcagccctgaggaagctctacgaagactccgacaaaataggctgtgaagtgtacaac 114
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 78 atagcagccctaaggaagctctatgaagactccgacaaaataggatgtgaagtatacaac 137
Query: 115 ttggggactggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttct 174
||||||| ||||||||||| | ||||||||||||||||||||||||||||||| ||||
Sbjct: 138 ctggggacaggaaaggggacattggtgttggaaatggtggctgcattcgagaaggtttct 197
Query: 175 gggaagaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctac 234
|||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 198 gggaagaaaatcccactggtgtttgctgggcgaagacctggagacgcagagatcgtctat 257
Query: 235 gccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggag 294
||||||||||||||||||||||| || |||||||||||||| || |||||||||||||||
Sbjct: 258 gccgcaactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggag 317
Query: 295 atgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgc 354
|||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| ||||
Sbjct: 318 atgtgcagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaa 377
Query: 355 gacaacagcaaatgaaccacccatccatgcatcc 388
|||||| ||||||||| |||| ||||||||||||
Sbjct: 378 gacaacggcaaatgaatcaccgatccatgcatcc 411
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 495 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 554
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 555 gaggagtaggggggtc 570
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 643 catggttggttgctagaaaaggaataa 669
>gb|CD208815.1|CD208815 HS1_44_A11.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_44_A11_A012 3', mRNA sequence
Length = 676
Score = 424 bits (214), Expect = e-117
Identities = 304/334 (91%)
Strand = Plus / Plus
Query: 55 atagcagccctgaggaagctctacgaagactccgacaaaataggctgtgaagtgtacaac 114
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 59 atagcagccctaaggaagctctatgaagactccgacaaaataggatgtgaagtatacaac 118
Query: 115 ttggggactggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttct 174
||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||
Sbjct: 119 ctggggacaggaaaggggacatcggtgttggaaatggtggctgcattcgagaaggtttct 178
Query: 175 gggaagaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctac 234
|||||||||||||| |||||||| |||||||||||||| || |||||||||||||||||
Sbjct: 179 gggaagaaaatcccactggtgtttgctgggcgaagacctggggacgcagagatcgtctat 238
Query: 235 gccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggag 294
||||||||||||||||||||||| || |||||||||||||| || |||||||||||||||
Sbjct: 239 gccgcaactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggag 298
Query: 295 atgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgc 354
|||||||||||||||||||| ||||| ||||||||||| || || || ||||| ||||
Sbjct: 299 atgtgcagagatctgtggaattgggcaagcaagaacccatatggctatgctggatcacaa 358
Query: 355 gacaacagcaaatgaaccacccatccatgcatcc 388
|||||| ||||||||| |||| ||||||||||||
Sbjct: 359 gacaacggcaaatgaatcaccgatccatgcatcc 392
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 476 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 535
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 536 gaggagtaggggggtc 551
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 624 catggttggttgctagaaaaggaataa 650
>gb|CD209959.1|CD209959 HS1_56_C07.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_56_C07_A012 3', mRNA sequence
Length = 627
Score = 424 bits (214), Expect = e-117
Identities = 295/322 (91%)
Strand = Plus / Plus
Query: 67 aggaagctctacgaagactccgacaaaataggctgtgaagtgtacaacttggggactgga 126
||||||||||| |||||||||||||||||||| |||||||| |||||| ||||||| |||
Sbjct: 5 aggaagctctatgaagactccgacaaaataggatgtgaagtatacaacctggggacagga 64
Query: 127 aaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaatc 186
|||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 65 aaggggacatcggtgttggaaatggtggctgcattcgagaaggtttctgggaagaaaatc 124
Query: 187 cctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgcc 246
|| |||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 125 ccactggtgtttgctgggcgaagacctggagacgcagagatcgtctatgccgcaactgcc 184
Query: 247 aaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgcagagat 306
||||||||||| || |||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 185 aaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggagatgtgcagagat 244
Query: 307 ctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgcgacaacagcaaa 366
|||||||| ||||| ||||||||||| ||||| || ||||| |||| |||||| |||||
Sbjct: 245 ctgtggaattgggcaagcaagaacccatacggctatgctggatcacaagacaacggcaaa 304
Query: 367 tgaaccacccatccatgcatcc 388
|||| |||| ||||||||||||
Sbjct: 305 tgaatcaccgatccatgcatcc 326
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 410 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 469
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 470 gaggagtaggggggtc 485
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 558 catggttggttgctagaaaaggaataa 584
>gb|CN147179.1|CN147179 WOUND1_48_D07.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_48_D07_A002 3', mRNA sequence
Length = 743
Score = 424 bits (214), Expect = e-117
Identities = 304/334 (91%)
Strand = Plus / Plus
Query: 55 atagcagccctgaggaagctctacgaagactccgacaaaataggctgtgaagtgtacaac 114
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 145 atagcagccctaaggaagctctatgaagactccgacaaaataggatgtgaagtatacaac 204
Query: 115 ttggggactggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttct 174
||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||
Sbjct: 205 ctggggacaggaaaggggacatcggtgttggaaatggtggctgcattcgagaaggtttct 264
Query: 175 gggaagaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctac 234
|||||||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||
Sbjct: 265 gggaagaaaatcccactggtgtttgctgggcgaagacctggagacgcagagatcgtttat 324
Query: 235 gccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggag 294
|||| |||||||||||||||||| || |||||||||||||| || |||||||||||||||
Sbjct: 325 gccgaaactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggag 384
Query: 295 atgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgc 354
|||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| ||||
Sbjct: 385 atgtgcagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaa 444
Query: 355 gacaacagcaaatgaaccacccatccatgcatcc 388
|||||| ||||||||| |||| ||||||||||||
Sbjct: 445 gacaacggcaaatgaatcaccgatccatgcatcc 478
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 562 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 621
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 622 gaggagtaggggggtc 637
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 710 catggttggttgctagaaaaggaataa 736
>gb|CN149951.1|CN149951 WOUND1_66_A06.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_66_A06_A002 3', mRNA sequence
Length = 604
Score = 424 bits (214), Expect = e-117
Identities = 304/334 (91%)
Strand = Plus / Plus
Query: 55 atagcagccctgaggaagctctacgaagactccgacaaaataggctgtgaagtgtacaac 114
||||||||||| ||||||||||| ||||| |||||||||||||| |||||||| ||||||
Sbjct: 6 atagcagccctaaggaagctctatgaagattccgacaaaataggatgtgaagtatacaac 65
Query: 115 ttggggactggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttct 174
||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||
Sbjct: 66 ctggggacaggaaaggggacatcggtgttggaaatggtggctgcattcgagaaggtttct 125
Query: 175 gggaagaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctac 234
|||||||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||
Sbjct: 126 gggaagaaaatcccactggtgtttgctgggcgaagacctggagacgcagagatcgtttat 185
Query: 235 gccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggag 294
||||||||||||||||||||||| || |||||||||||||| || |||||||||||||||
Sbjct: 186 gccgcaactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggag 245
Query: 295 atgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgc 354
|||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| ||||
Sbjct: 246 atgtgcagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaa 305
Query: 355 gacaacagcaaatgaaccacccatccatgcatcc 388
|||||| ||||||||| |||| ||||||||||||
Sbjct: 306 gacaacggcaaatgaatcaccgatccatgcatcc 339
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 423 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 482
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 483 gaggagtaggggggtc 498
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 571 catggttggttgctagaaaaggaataa 597
>gb|CX620652.1|CX620652 GABR1_53_D12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_53_D12_A002 3', mRNA sequence
Length = 719
Score = 424 bits (214), Expect = e-117
Identities = 304/334 (91%)
Strand = Plus / Plus
Query: 55 atagcagccctgaggaagctctacgaagactccgacaaaataggctgtgaagtgtacaac 114
||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 77 atagcagccctaaggaagctctatgaagactccgacaaaataggatgtgaagtatacaac 136
Query: 115 ttggggactggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttct 174
||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||
Sbjct: 137 ctggggacaggaaaggggacatcggtgttggaaatggtggctgcattcgagaaggtttct 196
Query: 175 gggaagaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctac 234
|||||||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||
Sbjct: 197 gggaagaaaatcccactggtgtttgctgggcgaagacctggagacgcagagatcgtttat 256
Query: 235 gccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggag 294
||||||||||||||||||||||| || |||||||||||||| || |||||||||||||||
Sbjct: 257 gccgcaactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggag 316
Query: 295 atgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgc 354
|||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| ||||
Sbjct: 317 atgtgcagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaa 376
Query: 355 gacaacagcaaatgaaccacccatccatgcatcc 388
|||||| || |||||| |||| ||||||||||||
Sbjct: 377 gacaacggcgaatgaatcaccgatccatgcatcc 410
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 494 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 553
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 554 gaggagtaggggggtc 569
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 642 catggttggttgctagaaaaggaataa 668
>gb|CN149638.1|CN149638 WOUND1_64_B06.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_64_B06_A002 3', mRNA sequence
Length = 717
Score = 416 bits (210), Expect = e-114
Identities = 303/334 (90%)
Strand = Plus / Plus
Query: 55 atagcagccctgaggaagctctacgaagactccgacaaaataggctgtgaagtgtacaac 114
||||||||||| ||||||||||| ||||||||||||||||| || |||||||| | ||||
Sbjct: 118 atagcagccctaaggaagctctatgaagactccgacaaaatcggatgtgaagtatccaac 177
Query: 115 ttggggactggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttct 174
||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||
Sbjct: 178 ctggggacaggaaaggggacatcggtgttggaaatggtggctgcattcgagaaggtttct 237
Query: 175 gggaagaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctac 234
|||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 238 gggaagaaaatcccactggtgtttgctgggcgaagacctggagacgcagagatcgtctat 297
Query: 235 gccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggag 294
|||||||||||||||||||||| || |||||||||||||| || |||||||||||||||
Sbjct: 298 cccgcaactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggag 357
Query: 295 atgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgc 354
|||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| ||||
Sbjct: 358 atgtgcagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaa 417
Query: 355 gacaacagcaaatgaaccacccatccatgcatcc 388
|||||| ||||||||| |||| ||||||||||||
Sbjct: 418 gacaacggcaaatgaatcaccgatccatgcatcc 451
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 535 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 594
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 595 gaggagtaggggggtc 610
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 683 catggttggttgctagaaaaggaataa 709
>gb|BE601384.1|BE601384 PI1_92_C10.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 475
Score = 410 bits (207), Expect = e-113
Identities = 288/315 (91%)
Strand = Plus / Plus
Query: 74 tctacgaagactccgacaaaataggctgtgaagtgtacaacttggggactggaaagggga 133
|||| |||||||||||||||||||| |||||||| |||||| ||||||| ||||||||||
Sbjct: 1 tctatgaagactccgacaaaataggatgtgaagtatacaacctggggacaggaaagggga 60
Query: 134 cgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaatccctctgg 193
| || ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 61 catcggtgttggaaatggtggctgcattcgagaaggtttctgggaagaaaatcccactgg 120
Query: 194 tgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgccaaggcag 253
|||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 121 tgtttgctgggcgaagacctggagacgcagagatcgtctatgccgcaactgccaaggcag 180
Query: 254 agaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgcagagatctgtgga 313
|||| || |||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 181 agaaagatctcaaatggaaggcaaaatacgggatcgaggagatgtgcagagatctgtgga 240
Query: 314 actgggcgagcaagaacccgtacgggtacgctgggtcacgcgacaacagcaaatgaacca 373
| ||||| ||||||||||| ||||| || ||||| |||| |||||| ||||||||| ||
Sbjct: 241 attgggcaagcaagaacccatacggctatgctggatcacaagacaacggcaaatgaatca 300
Query: 374 cccatccatgcatcc 388
|| ||||||||||||
Sbjct: 301 ccgatccatgcatcc 315
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 399 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 458
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 459 gaggagtaggggggtc 474
>gb|CD233292.1|CD233292 SS1_13_A05.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_13_A05_A012 3', mRNA sequence
Length = 652
Score = 408 bits (206), Expect = e-112
Identities = 284/310 (91%)
Strand = Plus / Plus
Query: 79 gaagactccgacaaaataggctgtgaagtgtacaacttggggactggaaaggggacgtcc 138
|||||||||||||||||||| |||||||| |||||| ||||||| ||||||||||| ||
Sbjct: 1 gaagactccgacaaaataggatgtgaagtatacaacctggggacaggaaaggggacatcg 60
Query: 139 gtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaatccctctggtgttc 198
||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 61 gtgttggaaatggtggctgcattcgagaaggtttctgggaagaaaatcccactggtgttt 120
Query: 199 gctgggcgaagacccggagacgcagagatcgtctacgccgcaactgccaaggcagagaag 258
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 121 gctgggcgaagacctggagacgcagagatcgtctatgccgcaactgccaaggcagagaaa 180
Query: 259 gagctcaaatggaaggccaagtacgggatcgaggagatgtgcagagatctgtggaactgg 318
|| |||||||||||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 181 gatctcaaatggaaggcaaaatacgggatcgaggagatgtgcagagatctgtggaattgg 240
Query: 319 gcgagcaagaacccgtacgggtacgctgggtcacgcgacaacagcaaatgaaccacccat 378
|| ||||||||||| ||||| || ||||| |||| |||||| ||||||||| |||| ||
Sbjct: 241 gcaagcaagaacccatacggctatgctggatcacaagacaacggcaaatgaatcaccgat 300
Query: 379 ccatgcatcc 388
||||||||||
Sbjct: 301 ccatgcatcc 310
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 394 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 453
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 454 gaggagtaggggggtc 469
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 542 catggttggttgctagaaaaggaataa 568
>gb|BG559776.1|BG559776 RHIZ2_73_E06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 597
Score = 406 bits (205), Expect = e-111
Identities = 307/341 (90%), Gaps = 5/341 (1%)
Strand = Plus / Plus
Query: 73 ctctacgaagactccgacaaaataggctgtgaagtgtacaacttggggactggaaagggg 132
||||| |||||||||||||||||||| |||||||| |||||| ||||||| |||||||||
Sbjct: 1 ctctatgaagactccgacaaaataggatgtgaagtatacaacctggggacaggaaagggg 60
Query: 133 acgtccgtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaatccctctg 192
|| || ||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 61 acatcggtgttggaaatggtggctgcattcgagaaggtttctgggaagaaaatcccactg 120
Query: 193 gtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgccaaggca 252
||||| |||||||||||||| ||||| |||||||||||||| ||||||||||||||||||
Sbjct: 121 gtgtttgctgggcgaagacctggagatgcagagatcgtctatgccgcaactgccaaggca 180
Query: 253 gagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgcagagatctgtgg 312
||||| || |||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 181 gagaaagatctcaaatggaaggcaaaatacgggatcgaggagatgtgcagagatctgtgg 240
Query: 313 aactgggcgagcaagaacccgtacgggtacgctgggtcacgcgacaacagcaaatgaacc 372
|| ||||| ||||||||||| ||||| || ||||| |||| |||||| ||||||||| |
Sbjct: 241 aattgggcaagcaagaacccatacggctatgctggatcacaagacaacggcaaatgaatc 300
Query: 373 acccatccatgcatcccatcctgcagtaggagcaagcagca 413
||| ||||||| ||||||||||||| |||||||||||
Sbjct: 301 accgatccatg-----catcctgcagtagtagcaagcagca 336
Score = 75.8 bits (38), Expect = 5e-012
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 396 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 455
Query: 557 gaggaggagggggg 570
|||||| |||||||
Sbjct: 456 gaggagtagggggg 469
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 630 tattactccatggttggttgctagagaaggaataa 664
|||| |||||||||||||||||||| |||||||||
Sbjct: 541 tattgctccatggttggttgctagaaaaggaataa 575
>gb|BG559745.1|BG559745 RHIZ2_73_B06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 589
Score = 398 bits (201), Expect = e-109
Identities = 300/333 (90%), Gaps = 5/333 (1%)
Strand = Plus / Plus
Query: 81 agactccgacaaaataggctgtgaagtgtacaacttggggactggaaaggggacgtccgt 140
|||||||||||||||||| |||||||| |||||| ||||||| ||||||||||| || ||
Sbjct: 1 agactccgacaaaataggatgtgaagtatacaacctggggacaggaaaggggacatcggt 60
Query: 141 gttggaaatggtggctgcattcgagaaggcttctgggaagaaaatccctctggtgttcgc 200
||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||
Sbjct: 61 gttggaaatggtggctgcattcgagaaggtttctgggaagaaaatcccactggtgtttgc 120
Query: 201 tgggcgaagacccggagacgcagagatcgtctacgccgcaactgccaaggcagagaagga 260
|||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 121 tgggcgaagacctggagatgcagagatcgtctatgccgcaactgccaaggcagagaaaga 180
Query: 261 gctcaaatggaaggccaagtacgggatcgaggagatgtgcagagatctgtggaactgggc 320
|||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 181 tctcaaatggaaggcaaaatacgggatcgaggagatgtgcagagatctgtggaattgggc 240
Query: 321 gagcaagaacccgtacgggtacgctgggtcacgcgacaacagcaaatgaaccacccatcc 380
||||||||||| ||||| || ||||| |||| |||||| ||||||||| |||| ||||
Sbjct: 241 aagcaagaacccatacggctatgctggatcacaagacaacggcaaatgaatcaccgatcc 300
Query: 381 atgcatcccatcctgcagtaggagcaagcagca 413
||| ||||||||||||| |||||||||||
Sbjct: 301 atg-----catcctgcagtagtagcaagcagca 328
Score = 75.8 bits (38), Expect = 5e-012
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 388 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 447
Query: 557 gaggaggagggggg 570
|||||| |||||||
Sbjct: 448 gaggagtagggggg 461
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 630 tattactccatggttggttgctagagaaggaataa 664
|||| |||||||||||||||||||| |||||||||
Sbjct: 533 tattgctccatggttggttgctagaaaaggaataa 567
>gb|CD204028.1|CD204028 HS1_3_G02.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_3_G02_A012 3', mRNA sequence
Length = 532
Score = 392 bits (198), Expect = e-107
Identities = 276/302 (91%)
Strand = Plus / Plus
Query: 87 cgacaaaataggctgtgaagtgtacaacttggggactggaaaggggacgtccgtgttgga 146
|||||||||||| |||||||| |||||| ||||||| ||||||||||| || ||||||||
Sbjct: 1 cgacaaaataggatgtgaagtatacaacctggggacaggaaaggggacatcggtgttgga 60
Query: 147 aatggtggctgcattcgagaaggcttctgggaagaaaatccctctggtgttcgctgggcg 206
||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||
Sbjct: 61 aatggtggctgcattcgagaaggtttctgggaagaaaatcccactggtgtttgctgggcg 120
Query: 207 aagacccggagacgcagagatcgtctacgccgcaactgccaaggcagagaaggagctcaa 266
|||||| |||||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 121 aagacctggagacgcagagatcgtctatgccgcaactgccaaggcagagaaagatctcaa 180
Query: 267 atggaaggccaagtacgggatcgaggagatgtgcagagatctgtggaactgggcgagcaa 326
||||||||| || ||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 181 atggaaggcaaaatacgggatcgaggagatgtgcagagatctgtggaattgggcaagcaa 240
Query: 327 gaacccgtacgggtacgctgggtcacgcgacaacagcaaatgaaccacccatccatgcat 386
|||||| ||||| || ||||| |||| |||||| ||||||||| |||| ||||||||||
Sbjct: 241 gaacccatacggctatgctggatcacaagacaacggcaaatgaatcaccgatccatgcat 300
Query: 387 cc 388
||
Sbjct: 301 cc 302
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 386 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 445
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 446 gaggagtaggggggtc 461
>gb|CD212197.1|CD212197 HS1_71_G10.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_71_G10_A012 3', mRNA sequence
Length = 574
Score = 392 bits (198), Expect = e-107
Identities = 276/302 (91%)
Strand = Plus / Plus
Query: 87 cgacaaaataggctgtgaagtgtacaacttggggactggaaaggggacgtccgtgttgga 146
|||||||||||| |||||||| |||||| ||||||| ||||||||||| || ||||||||
Sbjct: 1 cgacaaaataggatgtgaagtatacaacctggggacaggaaaggggacatcggtgttgga 60
Query: 147 aatggtggctgcattcgagaaggcttctgggaagaaaatccctctggtgttcgctgggcg 206
||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||
Sbjct: 61 aatggtggctgcattcgagaaggtttctgggaagaaaatcccactggtgtttgctgggcg 120
Query: 207 aagacccggagacgcagagatcgtctacgccgcaactgccaaggcagagaaggagctcaa 266
|||||| |||||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 121 aagacctggagacgcagagatcgtctatgccgcaactgccaaggcagagaaagatctcaa 180
Query: 267 atggaaggccaagtacgggatcgaggagatgtgcagagatctgtggaactgggcgagcaa 326
||||||||| || ||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 181 atggaaggcaaaatacgggatcgaggagatgtgcagagatctgtggaattgggcaagcaa 240
Query: 327 gaacccgtacgggtacgctgggtcacgcgacaacagcaaatgaaccacccatccatgcat 386
|||||| ||||| || ||||| |||| |||||| ||||||||| |||| ||||||||||
Sbjct: 241 gaacccatacggctatgctggatcacaagacaacggcaaatgaatcaccgatccatgcat 300
Query: 387 cc 388
||
Sbjct: 301 cc 302
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 386 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 445
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 446 gaggagtaggggggtc 461
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 534 catggttggttgctagaaaaggaataa 560
>gb|CF427003.1|CF427003 PH1_3_F11.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_3_F11_A002 3', mRNA sequence
Length = 564
Score = 392 bits (198), Expect = e-107
Identities = 276/302 (91%)
Strand = Plus / Plus
Query: 87 cgacaaaataggctgtgaagtgtacaacttggggactggaaaggggacgtccgtgttgga 146
|||||||||||| |||||||| |||||| ||||||| ||||||||||| || ||||||||
Sbjct: 1 cgacaaaataggatgtgaagtatacaacctggggacaggaaaggggacatcggtgttgga 60
Query: 147 aatggtggctgcattcgagaaggcttctgggaagaaaatccctctggtgttcgctgggcg 206
||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||
Sbjct: 61 aatggtggctgcattcgagaaggtttctgggaagaaaatcccactggtgtttgctgggcg 120
Query: 207 aagacccggagacgcagagatcgtctacgccgcaactgccaaggcagagaaggagctcaa 266
|||||| |||||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 121 aagacctggagacgcagagatcgtctatgccgcaactgccaaggcagagaaagatctcaa 180
Query: 267 atggaaggccaagtacgggatcgaggagatgtgcagagatctgtggaactgggcgagcaa 326
||||||||| || ||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 181 atggaaggcaaaatacgggatcgaggagatgtgcagagatctgtggaattgggcaagcaa 240
Query: 327 gaacccgtacgggtacgctgggtcacgcgacaacagcaaatgaaccacccatccatgcat 386
|||||| ||||| || ||||| |||| |||||| ||||||||| |||| ||||||||||
Sbjct: 241 gaacccatacggctatgctggatcacaagacaacggcaaatgaatcaccgatccatgcat 300
Query: 387 cc 388
||
Sbjct: 301 cc 302
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 386 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 445
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 446 gaggagtaggggggtc 461
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 534 catggttggttgctagaaaaggaataa 560
>gb|CD207497.1|CD207497 HS1_33_C08.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_33_C08_A012 3', mRNA sequence
Length = 627
Score = 391 bits (197), Expect = e-107
Identities = 275/301 (91%)
Strand = Plus / Plus
Query: 88 gacaaaataggctgtgaagtgtacaacttggggactggaaaggggacgtccgtgttggaa 147
||||||||||| |||||||| |||||| ||||||| ||||||||||| || |||||||||
Sbjct: 1 gacaaaataggatgtgaagtatacaacctggggacaggaaaggggacatcggtgttggaa 60
Query: 148 atggtggctgcattcgagaaggcttctgggaagaaaatccctctggtgttcgctgggcga 207
|||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||
Sbjct: 61 atggtggctgcattcgagaaggtttctgggaagaaaatcccactggtgtttgctgggcga 120
Query: 208 agacccggagacgcagagatcgtctacgccgcaactgccaaggcagagaaggagctcaaa 267
||||| |||||||||||||||||||| ||||||||||||||||||||||| || ||||||
Sbjct: 121 agacctggagacgcagagatcgtctatgccgcaactgccaaggcagagaaagatctcaaa 180
Query: 268 tggaaggccaagtacgggatcgaggagatgtgcagagatctgtggaactgggcgagcaag 327
|||||||| || ||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 181 tggaaggcaaaatacgggatcgaggagatgtgcagagatctgtggaattgggcaagcaag 240
Query: 328 aacccgtacgggtacgctgggtcacgcgacaacagcaaatgaaccacccatccatgcatc 387
||||| ||||| || ||||| |||| |||||| ||||||||| |||| |||||||||||
Sbjct: 241 aacccatacggctatgctggatcacaagacaacggcaaatgaatcaccgatccatgcatc 300
Query: 388 c 388
|
Sbjct: 301 c 301
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 385 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 444
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 445 gaggagtaggggggtc 460
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 533 catggttggttgctagaaaaggaataa 559
>gb|CD204161.1|CD204161 HS1_4_G11.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_4_G11_A012 3', mRNA sequence
Length = 569
Score = 377 bits (190), Expect = e-103
Identities = 271/298 (90%)
Strand = Plus / Plus
Query: 91 aaaataggctgtgaagtgtacaacttggggactggaaaggggacgtccgtgttggaaatg 150
|||||||| |||||||| |||||| ||||||| ||||||||||| || ||||||||||||
Sbjct: 1 aaaataggatgtgaagtatacaacctggggacaggaaaggggacatcggtgttggaaatg 60
Query: 151 gtggctgcattcgagaaggcttctgggaagaaaatccctctggtgttcgctgggcgaaga 210
||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||
Sbjct: 61 gtggctgcattcgagaaggtttctgggaagaaaatcccactggtgtttgctgggcgaaga 120
Query: 211 cccggagacgcagagatcgtctacgccgcaactgccaaggcagagaaggagctcaaatgg 270
|| ||||||||||||||||| || ||||||||||||||||||||||| || |||||||||
Sbjct: 121 cctggagacgcagagatcgtttatgccgcaactgccaaggcagagaaagatctcaaatgg 180
Query: 271 aaggccaagtacgggatcgaggagatgtgcagagatctgtggaactgggcgagcaagaac 330
||||| || ||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 181 aaggcaaaatacgggatcgaggagatgtgcagagatctgtggaattgggcaagcaagaac 240
Query: 331 ccgtacgggtacgctgggtcacgcgacaacagcaaatgaaccacccatccatgcatcc 388
|| ||||| || ||||| |||| |||||| ||||||||| |||| ||||||||||||
Sbjct: 241 ccatacggctatgctggatcacaagacaacggcaaatgaatcaccgatccatgcatcc 298
Score = 65.9 bits (33), Expect = 5e-009
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 524 tgcgatgggcctcgcttcttcagtgtatagagggaggaggaggggggtc 572
|||||||| ||||| ||||||| |||||||||||||||| |||||||||
Sbjct: 409 tgcgatggccctcgtttcttcattgtatagagggaggagtaggggggtc 457
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 530 catggttggttgctagaaaaggaataa 556
>gb|CD207647.1|CD207647 HS1_34_G09.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_34_G09_A012 3', mRNA sequence
Length = 547
Score = 359 bits (181), Expect = 2e-097
Identities = 250/273 (91%)
Strand = Plus / Plus
Query: 116 tggggactggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctg 175
||||||| ||||||||||| || ||||||||||||||||||||||||||||||| |||||
Sbjct: 1 tggggacaggaaaggggacatcggtgttggaaatggtggctgcattcgagaaggtttctg 60
Query: 176 ggaagaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacg 235
||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||| |
Sbjct: 61 ggaagaaaatcccactggtgtttgctgggcgaagacctggagacgcagagatcgtctatg 120
Query: 236 ccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggaga 295
|||||||||||||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 121 ccgcaactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggaga 180
Query: 296 tgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgcg 355
||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| |||| |
Sbjct: 181 tgtgcagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaag 240
Query: 356 acaacagcaaatgaaccacccatccatgcatcc 388
||||| ||||||||| |||| ||||||||||||
Sbjct: 241 acaacggcaaatgaatcaccgatccatgcatcc 273
Score = 71.9 bits (36), Expect = 7e-011
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||| ||||| ||||||| ||||||||||
Sbjct: 357 tcagtcagtcatctaattaggggatggtgcgatggccctcgtttcttcattgtatagagg 416
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 417 gaggagtaggggggtc 432
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 505 catggttggttgctagaaaaggaataa 531
>gb|CD231108.1|CD231108 SS1_8_B03.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_8_B03_A012 3', mRNA sequence
Length = 587
Score = 359 bits (181), Expect = 2e-097
Identities = 262/289 (90%)
Strand = Plus / Plus
Query: 100 tgtgaagtgtacaacttggggactggaaaggggacgtccgtgttggaaatggtggctgca 159
|||||||| |||| | ||||||| ||||||||||| || |||||||||||||||||||||
Sbjct: 2 tgtgaagtatacaccctggggacaggaaaggggacatcggtgttggaaatggtggctgca 61
Query: 160 ttcgagaaggcttctgggaagaaaatccctctggtgttcgctgggcgaagacccggagac 219
|||||||||| |||||||||||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 62 ttcgagaaggtttctgggaagaaaatcccactggtgtttgctgggcgaagacctggagac 121
Query: 220 gcagagatcgtctacgccgcaactgccaaggcagagaaggagctcaaatggaaggccaag 279
|||||||||||||| ||||||||||||||||||||||| || |||||||||||||| ||
Sbjct: 122 gcagagatcgtctatgccgcaactgccaaggcagagaaagatctcaaatggaaggcaaaa 181
Query: 280 tacgggatcgaggagatgtgcagagatctgtggaactgggcgagcaagaacccgtacggg 339
||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 182 tacgggatcgaggagatgtgcagagatctgtggaattgggcaagcaagaacccatacggc 241
Query: 340 tacgctgggtcacgcgacaacagcaaatgaaccacccatccatgcatcc 388
|| | ||| |||| |||||| ||||||||| |||| ||||||||||||
Sbjct: 242 tatgttggatcacaagacaacggcaaatgaatcaccgatccatgcatcc 290
Score = 71.9 bits (36), Expect = 7e-011
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||| ||||| ||||||| ||||||||||
Sbjct: 374 tcagtcagtcatctaattaggggatggtgcgatggccctcgtttcttcattgtatagagg 433
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 434 gaggagtaggggggtc 449
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 522 catggttggttgctagaaaaggaataa 548
>gb|CF772017.1|CF772017 DSBF1_27_H03.g9_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_27_H03_A010 3', mRNA sequence
Length = 543
Score = 359 bits (181), Expect = 2e-097
Identities = 250/273 (91%)
Strand = Plus / Plus
Query: 116 tggggactggaaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctg 175
||||||| ||||||||||| || ||||||||||||||||||||||||||||||| |||||
Sbjct: 1 tggggacaggaaaggggacatcggtgttggaaatggtggctgcattcgagaaggtttctg 60
Query: 176 ggaagaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacg 235
||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||| |
Sbjct: 61 ggaagaaaatcccactggtgtttgctgggcgaagacctggagacgcagagatcgtctatg 120
Query: 236 ccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggaga 295
|||||||||||||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 121 ccgcaactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggaga 180
Query: 296 tgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgcg 355
||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| |||| |
Sbjct: 181 tgtgcagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaag 240
Query: 356 acaacagcaaatgaaccacccatccatgcatcc 388
||||| ||||||||| |||| ||||||||||||
Sbjct: 241 acaacggcaaatgaatcaccgatccatgcatcc 273
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 357 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 416
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 417 gaggagtaggggggtc 432
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 506 catggttggttgctagaaaaggaataa 532
>gb|AW680990.1|AW680990 WS1_9_G07.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 567
Score = 337 bits (170), Expect = 8e-091
Identities = 230/250 (92%)
Strand = Plus / Plus
Query: 139 gtgttggaaatggtggctgcattcgagaaggcttctgggaagaaaatccctctggtgttc 198
||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 4 gtgttggaaatggtggctgcattcgagaaggtttctgggaagaaaatcccactggtgttt 63
Query: 199 gctgggcgaagacccggagacgcagagatcgtctacgccgcaactgccaaggcagagaag 258
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 64 gctgggcgaagacctggagacgcagagatcgtctatgccgcaactgccaaggcagagaaa 123
Query: 259 gagctcaaatggaaggccaagtacgggatcgaggagatgtgcagagatctgtggaactgg 318
|| |||||||||||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 124 gatctcaaatggaaggcaaaatacgggatcgaggagatgtgcagagatctgtggaattgg 183
Query: 319 gcgagcaagaacccgtacgggtacgctgggtcacgcgacaacagcaaatgaaccacccat 378
|| ||||||||||| ||||| || ||||| |||| |||||| ||||||||| |||| ||
Sbjct: 184 gcaagcaagaacccatacggctatgctggatcacaagacaacggcaaatgaatcaccgat 243
Query: 379 ccatgcatcc 388
||||||||||
Sbjct: 244 ccatgcatcc 253
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 337 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 396
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 397 gaggagtaggggggtc 412
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 485 catggttggttgctagaaaaggaataa 511
>gb|CF757382.1|CF757382 DSAF1_17_C03.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_17_C03_A011 3', mRNA sequence
Length = 556
Score = 333 bits (168), Expect = 1e-089
Identities = 241/264 (91%), Gaps = 1/264 (0%)
Strand = Plus / Plus
Query: 126 aaaggggacgtccgtgttggaaatggtggctgcattcgagaaggcttctggg-aagaaaa 184
||||||||| || ||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 5 aaaggggacatcggtgttggaaatggtggctgcattcgagaaggtttctggggaagaaaa 64
Query: 185 tccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactg 244
|||| |||||||| |||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 65 tcccactggtgtttgctgggcgaagacctggagacgcagagatcgtctatgccgcaactg 124
Query: 245 ccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtgcagag 304
||||||||||||| || |||||||||||||| || |||||||||||||||||||||||||
Sbjct: 125 ccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggagatgtgcagag 184
Query: 305 atctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgcgacaacagca 364
|||||||||| ||||| ||||||||||| ||||| || ||||| |||| |||||| |||
Sbjct: 185 atctgtggaattgggcaagcaagaacccatacggctatgctggatcacaagacaacggca 244
Query: 365 aatgaaccacccatccatgcatcc 388
|||||| |||| ||||||||||||
Sbjct: 245 aatgaatcaccgatccatgcatcc 268
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 352 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 411
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 412 gaggagtaggggggtc 427
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 500 catggttggttgctagaaaaggaataa 526
>gb|CF771531.1|CF771531 DSBF1_20_F08.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_20_F08_A010 3', mRNA sequence
Length = 480
Score = 256 bits (129), Expect = 2e-066
Identities = 193/213 (90%), Gaps = 1/213 (0%)
Strand = Plus / Plus
Query: 177 gaagaaaatccctctggtgttc-gctgggcgaagacccggagacgcagagatcgtctacg 235
|||||||||||| |||||||| |||||||||||||| |||||||||||||||||||| |
Sbjct: 1 gaagaaaatcccactggtgttttgctgggcgaagacctggagacgcagagatcgtctatg 60
Query: 236 ccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggaga 295
|||||||||||||||||||||| || |||||||||||||| || ||||||||||||||||
Sbjct: 61 ccgcaactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggaga 120
Query: 296 tgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgcg 355
||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| |||| |
Sbjct: 121 tgtgcagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaag 180
Query: 356 acaacagcaaatgaaccacccatccatgcatcc 388
||||| ||||||||| |||| ||||||||||||
Sbjct: 181 acaacggcaaatgaatcaccgatccatgcatcc 213
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 297 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 356
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 357 gaggagtaggggggtc 372
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 445 catggttggttgctagaaaaggaataa 471
>gb|AW747778.1|AW747778 WS1_76_G10.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 527
Score = 248 bits (125), Expect = 6e-064
Identities = 188/209 (89%)
Strand = Plus / Plus
Query: 180 gaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgc 239
||||||||| |||| || |||||||||||||| |||||||||||||||||||| |||||
Sbjct: 1 gaaaatcccactgggttttgctgggcgaagacctggagacgcagagatcgtctatgccgc 60
Query: 240 aactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtg 299
|||||||||||||||||| || |||||||||||||| || ||||||||||||||||||||
Sbjct: 61 aactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggagatgtg 120
Query: 300 cagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgcgacaa 359
||||||||||||||| ||||| ||||||||||| ||||| || ||||| |||| |||||
Sbjct: 121 cagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaagacaa 180
Query: 360 cagcaaatgaaccacccatccatgcatcc 388
| ||||||||| |||| ||||||||||||
Sbjct: 181 cggcaaatgaatcaccgatccatgcatcc 209
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 293 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 352
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 353 gaggagtaggggggtc 368
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 441 catggttggttgctagaaaaggaataa 467
>gb|AW925213.1|AW925213 WS1_76_G10.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 480
Score = 248 bits (125), Expect = 6e-064
Identities = 188/209 (89%)
Strand = Plus / Plus
Query: 180 gaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccgc 239
||||||||| |||| || |||||||||||||| |||||||||||||||||||| |||||
Sbjct: 1 gaaaatcccactgggttttgctgggcgaagacctggagacgcagagatcgtctatgccgc 60
Query: 240 aactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtg 299
|||||||||||||||||| || |||||||||||||| || ||||||||||||||||||||
Sbjct: 61 aactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggagatgtg 120
Query: 300 cagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgcgacaa 359
||||||||||||||| ||||| ||||||||||| ||||| || ||||| |||| |||||
Sbjct: 121 cagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaagacaa 180
Query: 360 cagcaaatgaaccacccatccatgcatcc 388
| ||||||||| |||| ||||||||||||
Sbjct: 181 cggcaaatgaatcaccgatccatgcatcc 209
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 293 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 352
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 353 gaggagtaggggggtc 368
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 441 catggttggttgctagaaaaggaataa 467
>gb|CN151584.1|CN151584 WOUND1_76_H02.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_76_H02_A002 3', mRNA sequence
Length = 584
Score = 178 bits (90), Expect = 4e-043
Identities = 138/154 (89%)
Strand = Plus / Plus
Query: 235 gccgcaactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggag 294
||||||||||||||||||||||| || |||||||||||||| || |||||||||||||||
Sbjct: 76 gccgcaactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggag 135
Query: 295 atgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgc 354
|||||||||||||||||||| ||||| ||||||||||| ||||| || | ||| ||||
Sbjct: 136 atgtgcagagatctgtggaattgggcaagcaagaacccatacggttatgttggatcacaa 195
Query: 355 gacaacagcaaatgaaccacccatccatgcatcc 388
|||||| ||||||||| |||| ||||||||||||
Sbjct: 196 gacaacggcaaatgaatcaccgatccatgcatcc 229
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 313 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 372
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 373 gaggagtaggggggtc 388
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 461 catggttggttgctagaaaaggaataa 487
>gb|AW681149.1|AW681149 WS1_9_G07.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 435
Score = 176 bits (89), Expect = 2e-042
Identities = 134/149 (89%)
Strand = Plus / Plus
Query: 240 aactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgtg 299
|||||||||||||||||| || |||||||||||||| || ||||||||||||||||||||
Sbjct: 1 aactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggagatgtg 60
Query: 300 cagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgcgacaa 359
||||||||||||||| ||||| ||||||||||| ||||| || ||||| |||| |||||
Sbjct: 61 cagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaagacaa 120
Query: 360 cagcaaatgaaccacccatccatgcatcc 388
| ||||||||| |||| ||||||||||||
Sbjct: 121 cggcaaatgaatcaccgatccatgcatcc 149
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 233 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 292
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 293 gaggagtaggggggtc 308
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 381 catggttggttgctagaaaaggaataa 407
>gb|CN151674.1|CN151674 WOUND1_76_H02.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_76_H02_A002 5', mRNA sequence
Length = 705
Score = 176 bits (89), Expect = 2e-042
Identities = 134/149 (89%)
Strand = Plus / Plus
Query: 239 caactgccaaggcagagaaggagctcaaatggaaggccaagtacgggatcgaggagatgt 298
||||||||||||||||||| || |||||||||||||| || |||||||||||||||||||
Sbjct: 557 caactgccaaggcagagaaagatctcaaatggaaggcaaaatacgggatcgaggagatgt 616
Query: 299 gcagagatctgtggaactgggcgagcaagaacccgtacgggtacgctgggtcacgcgaca 358
|||||||||||||||| ||||| ||||||||||| ||||| || ||||| |||| ||||
Sbjct: 617 gcagagatctgtggaattgggcaagcaagaacccatacggctatgctggatcacaagaca 676
Query: 359 acagcaaatgaaccacccatccatgcatc 387
|| ||||||||| |||| |||||||||||
Sbjct: 677 acggcaaatgaatcaccgatccatgcatc 705
>gb|CX620511.1|CX620511 GABR1_52_G02.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_52_G02_A002 3', mRNA sequence
Length = 419
Score = 147 bits (74), Expect = 2e-033
Identities = 113/126 (89%)
Strand = Plus / Plus
Query: 263 tcaaatggaaggccaagtacgggatcgaggagatgtgcagagatctgtggaactgggcga 322
||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 12 tcaaatggaaggcaaaatacgggatcgaggagatgtgcagagatctgtggaattgggcaa 71
Query: 323 gcaagaacccgtacgggtacgctgggtcacgcgacaacagcaaatgaaccacccatccat 382
|||||||||| ||||| || ||||| |||| |||||| ||||||||| |||| ||||||
Sbjct: 72 gcaagaacccatacggctatgctggatcacaagacaacggcaaatgaatcaccgatccat 131
Query: 383 gcatcc 388
||||||
Sbjct: 132 gcatcc 137
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 221 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 280
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 281 gaggagtaggggggtc 296
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 369 catggttggttgctagaaaaggaataa 395
>gb|CW135125.1|CW135125 104_519_11117679_116_34828_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11117679, DNA
sequence
Length = 602
Score = 135 bits (68), Expect = 6e-030
Identities = 118/134 (88%), Gaps = 3/134 (2%)
Strand = Plus / Minus
Query: 283 gggatcgaggagatgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtac 342
||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 340 gggatcgaggagatgtgtagagatctgtggaattgggcaagcaagaacccatacggctat 281
Query: 343 gctgggtcacgcgacaacagcaaatgaaccacccatccatgcatc---ccatcctgcagt 399
||||| |||||||||||||||||||||| || | |||||| |||| ||||| ||||||
Sbjct: 280 gctggatcacgcgacaacagcaaatgaatcatctatccatccatctatccatcgtgcagt 221
Query: 400 aggagcaagcagca 413
|| |||||||||||
Sbjct: 220 agtagcaagcagca 207
Score = 79.8 bits (40), Expect = 3e-013
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 194 tgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgccaaggcag 253
|||| |||||| ||||||| |||||| |||||| ||||| ||||||||||||||||||
Sbjct: 512 tgtttgctgggtgaagacctggagaca-agagattgtctatgccgcaactgccaaggcaa 454
Query: 254 agaaggagctcaaatggaag 273
|||| |||||||||||||||
Sbjct: 453 agaaagagctcaaatggaag 434
>gb|CW135126.1|CW135126 104_519_11117679_148_34824_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11117679, DNA
sequence
Length = 694
Score = 135 bits (68), Expect = 6e-030
Identities = 118/134 (88%), Gaps = 3/134 (2%)
Strand = Plus / Plus
Query: 283 gggatcgaggagatgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtac 342
||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 490 gggatcgaggagatgtgtagagatctgtggaattgggcaagcaagaacccatacggctat 549
Query: 343 gctgggtcacgcgacaacagcaaatgaaccacccatccatgcatc---ccatcctgcagt 399
||||| |||||||||||||||||||||| || | |||||| |||| ||||| ||||||
Sbjct: 550 gctggatcacgcgacaacagcaaatgaatcatctatccatccatctatccatcgtgcagt 609
Query: 400 aggagcaagcagca 413
|| |||||||||||
Sbjct: 610 agtagcaagcagca 623
Score = 79.8 bits (40), Expect = 3e-013
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 194 tgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgccaaggcag 253
|||| |||||| ||||||| |||||| |||||| ||||| ||||||||||||||||||
Sbjct: 318 tgtttgctgggtgaagacctggagaca-agagattgtctatgccgcaactgccaaggcaa 376
Query: 254 agaaggagctcaaatggaag 273
|||| |||||||||||||||
Sbjct: 377 agaaagagctcaaatggaag 396
>gb|CW143126.1|CW143126 104_534_11137243_116_34950_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11137243, DNA
sequence
Length = 655
Score = 135 bits (68), Expect = 6e-030
Identities = 118/134 (88%), Gaps = 3/134 (2%)
Strand = Plus / Plus
Query: 283 gggatcgaggagatgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtac 342
||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 198 gggatcgaggagatgtgtagagatctgtggaattgggcaagcaagaacccatacggctat 257
Query: 343 gctgggtcacgcgacaacagcaaatgaaccacccatccatgcatc---ccatcctgcagt 399
||||| |||||||||||||||||||||| || | |||||| |||| ||||| ||||||
Sbjct: 258 gctggatcacgcgacaacagcaaatgaatcatctatccatccatctatccatcgtgcagt 317
Query: 400 aggagcaagcagca 413
|| |||||||||||
Sbjct: 318 agtagcaagcagca 331
Score = 79.8 bits (40), Expect = 3e-013
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 194 tgttcgctgggcgaagacccggagacgcagagatcgtctacgccgcaactgccaaggcag 253
|||| |||||| ||||||| |||||| |||||| ||||| ||||||||||||||||||
Sbjct: 26 tgtttgctgggtgaagacctggagaca-agagattgtctatgccgcaactgccaaggcaa 84
Query: 254 agaaggagctcaaatggaag 273
|||| |||||||||||||||
Sbjct: 85 agaaagagctcaaatggaag 104
Score = 44.1 bits (22), Expect = 0.017
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 628 gatattactccatggttggttgctag 653
||||||||||||||||| ||||||||
Sbjct: 554 gatattactccatggtttgttgctag 579
>gb|CW114055.1|CW114055 104_488_11105786_116_34560_005 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11105786, DNA
sequence
Length = 571
Score = 131 bits (66), Expect = 9e-029
Identities = 87/94 (92%)
Strand = Plus / Plus
Query: 179 agaaaatccctctggtgttcgctgggcgaagacccggagacgcagagatcgtctacgccg 238
|||||||||| |||||||| |||||||||||||| |||||||||||||||||||| ||||
Sbjct: 395 agaaaatcccactggtgtttgctgggcgaagacctggagacgcagagatcgtctatgccg 454
Query: 239 caactgccaaggcagagaaggagctcaaatggaa 272
|||||||| |||||||||| || |||||||||||
Sbjct: 455 caactgcctaggcagagaaagatctcaaatggaa 488
Score = 115 bits (58), Expect = 6e-024
Identities = 79/86 (91%)
Strand = Plus / Plus
Query: 95 taggctgtgaagtgtacaacttggggactggaaaggggacgtccgtgttggaaatggtgg 154
|||| |||||||| |||||| ||||||| ||||||||||| || ||||||||||||||||
Sbjct: 122 taggatgtgaagtatacaacctggggacaggaaaggggacatcggtgttggaaatggtgg 181
Query: 155 ctgcattcgagaaggcttctgggaag 180
||||||||||||||| ||||||||||
Sbjct: 182 ctgcattcgagaaggtttctgggaag 207
>gb|CW466008.1|CW466008 fsbb001f217a21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f217a21, DNA
sequence
Length = 433
Score = 129 bits (65), Expect = 4e-028
Identities = 98/109 (89%)
Strand = Plus / Plus
Query: 280 tacgggatcgaggagatgtgcagagatctgtggaactgggcgagcaagaacccgtacggg 339
||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 132 tacgggatcgaggagatgtgcagagatctgtggaattgggcaagcaagaacccatacggc 191
Query: 340 tacgctgggtcacgcgacaacagcaaatgaaccacccatccatgcatcc 388
|| ||||| |||| |||||| ||||||||| |||| ||||||||||||
Sbjct: 192 tatgctggatcacaagacaacggcaaatgaatcaccgatccatgcatcc 240
Score = 63.9 bits (32), Expect = 2e-008
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 525 gcgatgggcctcgcttcttcagtgtatagagggaggaggaggggggtc 572
||||||||||||| ||||||| |||||||||||||||| | |||||||
Sbjct: 352 gcgatgggcctcgtttcttcattgtatagagggaggagtacgggggtc 399
>gb|CF772247.1|CF772247 DSBF1_31_B12.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_31_B12_A010 3', mRNA sequence
Length = 432
Score = 129 bits (65), Expect = 4e-028
Identities = 98/109 (89%)
Strand = Plus / Plus
Query: 280 tacgggatcgaggagatgtgcagagatctgtggaactgggcgagcaagaacccgtacggg 339
||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 20 tacgggatcgaggagatgtgcagagatctgtggaattgggcaagcaagaacccatacggc 79
Query: 340 tacgctgggtcacgcgacaacagcaaatgaaccacccatccatgcatcc 388
|| ||||| |||| |||||| ||||||||| |||| ||||||||||||
Sbjct: 80 tatgctggatcacaagacaacggcaaatgaatcaccgatccatgcatcc 128
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 212 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 271
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 272 gaggagtaggggggtc 287
Score = 40.1 bits (20), Expect = 0.26
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaa 661
||||||||||||||||| ||||||
Sbjct: 361 catggttggttgctagaaaaggaa 384
>gb|CW143127.1|CW143127 104_534_11137243_148_34946_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11137243, DNA
sequence
Length = 626
Score = 127 bits (64), Expect = 1e-027
Identities = 118/134 (88%), Gaps = 4/134 (2%)
Strand = Plus / Minus
Query: 283 gggatcgaggagatgtgcagagatctgtggaactgggcgagcaagaacccgtacgggtac 342
||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||| ||
Sbjct: 615 gggatcgaggagatgtgtagagatctgtggaa-tgggcaagcaagaacccatacggctat 557
Query: 343 gctgggtcacgcgacaacagcaaatgaaccacccatccatgcatc---ccatcctgcagt 399
||||| |||||||||||||||||||||| || | |||||| |||| ||||| ||||||
Sbjct: 556 gctggatcacgcgacaacagcaaatgaatcatctatccatccatctatccatcgtgcagt 497
Query: 400 aggagcaagcagca 413
|| |||||||||||
Sbjct: 496 agtagcaagcagca 483
Score = 50.1 bits (25), Expect = 3e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 628 gatattactccatggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||| |||||||||
Sbjct: 260 gatattactccatggtttgttgctaggaaaggaataa 224
>gb|CW114056.1|CW114056 104_488_11105786_148_34564_005 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11105786, DNA
sequence
Length = 735
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 655 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 596
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 595 gaggagtaggggggtc 580
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 507 catggttggttgctagaaaaggaataa 481
>gb|CF756365.1|CF756365 DSAF1_5_D07.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_5_D07_A011 5', mRNA sequence
Length = 400
Score = 79.8 bits (40), Expect = 3e-013
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 498 tcagccagtcatctgattagggg-tactgcgatgggcctcgcttcttcagtgtatagagg 556
|||| ||||||||| |||||||| | |||||||||||||| ||||||| ||||||||||
Sbjct: 105 tcagtcagtcatctaattaggggatggtgcgatgggcctcgtttcttcattgtatagagg 164
Query: 557 gaggaggaggggggtc 572
|||||| |||||||||
Sbjct: 165 gaggagtaggggggtc 180
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 638 catggttggttgctagagaaggaataa 664
||||||||||||||||| |||||||||
Sbjct: 253 catggttggttgctagaaaaggaataa 279
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 189,413
Number of Sequences: 832831
Number of extensions: 189413
Number of successful extensions: 49981
Number of sequences better than 0.5: 65
Number of HSP's better than 0.5 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49760
Number of HSP's gapped (non-prelim): 212
length of query: 691
length of database: 491,359,669
effective HSP length: 20
effective length of query: 671
effective length of database: 474,703,049
effective search space: 318525745879
effective search space used: 318525745879
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)