BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3848767.2.1
(1467 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD222123.1|CD222123 CCC1_2_A08.b1_A007 Callus culture/ce... 492 e-137
gb|CD225063.1|CD225063 CCC1_38_C02.b1_A007 Callus culture/c... 470 e-130
gb|CD220118.1|CD220118 CCC1_65_G03.b1_A007 Callus culture/c... 466 e-129
gb|CW145901.1|CW145901 104_538_11138707_148_34980_070 Sorgh... 331 1e-088
gb|CW250598.1|CW250598 104_712_11223479_116_35050_082 Sorgh... 331 1e-088
gb|CW023657.1|CW023657 104_163_10432571_5_30009 Sorghum met... 287 1e-075
gb|CW145900.1|CW145900 104_538_11138707_116_34976_070 Sorgh... 262 8e-068
gb|CW094183.1|CW094183 104_457_11000174_116_37476_053 Sorgh... 254 2e-065
gb|CW250599.1|CW250599 104_712_11223479_148_35054_082 Sorgh... 254 2e-065
gb|CW479674.1|CW479674 fsbb001f238f03f0 Sorghum methylation... 254 2e-065
gb|CD220219.1|CD220219 CCC1_65_G03.g1_A007 Callus culture/c... 254 2e-065
gb|CD222181.1|CD222181 CCC1_2_A08.g1_A007 Callus culture/ce... 254 2e-065
gb|CW023656.1|CW023656 104_163_10432571_1_30001 Sorghum met... 232 7e-059
gb|CW119932.1|CW119932 104_497_11109041_148_34644_077 Sorgh... 230 3e-058
gb|CW071641.1|CW071641 104_323_10591612_116_30545 Sorghum m... 222 7e-056
gb|CW117585.1|CW117585 104_493_11107734_148_34611_019 Sorgh... 208 1e-051
gb|BZ365982.1|BZ365982 ic93g12.g1 WGS-SbicolorF (JM107 adap... 200 3e-049
gb|CW322872.1|CW322872 104_816_11476333_148_35949_049 Sorgh... 200 3e-049
gb|CW058583.1|CW058583 104_301_10518818_114_30158 Sorghum m... 186 4e-045
gb|CW216616.1|CW216616 104_649_11195211_148_37126_008 Sorgh... 178 1e-042
gb|CW494483.1|CW494483 fsbb001f285m17f0 Sorghum methylation... 157 4e-036
gb|CW295801.1|CW295801 104_777_11461144_148_35627_060 Sorgh... 149 9e-034
gb|CW117584.1|CW117584 104_493_11107734_116_34615_019 Sorgh... 147 3e-033
gb|CW058584.1|CW058584 104_301_10518818_115_30164 Sorghum m... 145 1e-032
gb|CW438908.1|CW438908 fsbb001f156m13f0 Sorghum methylation... 137 3e-030
gb|CW111628.1|CW111628 104_485_11104425_116_34537_045 Sorgh... 131 2e-028
gb|CW295800.1|CW295800 104_777_11461144_116_35623_060 Sorgh... 105 1e-020
gb|BZ365981.1|BZ365981 ic93g12.b1 WGS-SbicolorF (JM107 adap... 101 2e-019
gb|CL177995.1|CL177995 104_385_10894245_116_31914_309 Sorgh... 101 2e-019
gb|CW071662.1|CW071662 104_323_10591624_114_30474 Sorghum m... 101 2e-019
gb|CW166561.1|CW166561 104_575_11153119_116_36768_026 Sorgh... 101 2e-019
gb|CW166563.1|CW166563 104_575_11153120_116_36765_026 Sorgh... 101 2e-019
gb|CW398250.1|CW398250 fsbb001f087j18f0 Sorghum methylation... 101 2e-019
gb|CW166562.1|CW166562 104_575_11153119_148_36767_026 Sorgh... 98 3e-018
gb|CW166564.1|CW166564 104_575_11153120_148_36766_026 Sorgh... 98 3e-018
gb|CW461362.1|CW461362 fsbb001f208p19f0 Sorghum methylation... 98 3e-018
gb|CW027936.1|CW027936 104_254_10498798_116_30396 Sorghum m... 96 1e-017
gb|CW216615.1|CW216615 104_649_11195211_116_37125_008 Sorgh... 96 1e-017
gb|CW160701.1|CW160701 104_567_11150024_116_36507_026 Sorgh... 94 4e-017
gb|CX613681.1|CX613681 GABR1_9_C10.g1_A002 GA- or brassinol... 92 2e-016
gb|CW479675.1|CW479675 fsbb001f238f03k0 Sorghum methylation... 88 3e-015
gb|CW119931.1|CW119931 104_497_11109041_116_34640_077 Sorgh... 84 4e-014
gb|BE356516.1|BE356516 DG1_125_E08.g1_A002 Dark Grown 1 (DG... 82 2e-013
gb|BE360622.1|BE360622 DG1_64_G02.g1_A002 Dark Grown 1 (DG1... 82 2e-013
gb|BE360957.1|BE360957 DG1_68_B06.g1_A002 Dark Grown 1 (DG1... 82 2e-013
gb|BE361232.1|BE361232 DG1_70_E07.g1_A002 Dark Grown 1 (DG1... 82 2e-013
gb|BE362011.1|BE362011 DG1_83_G04.g1_A002 Dark Grown 1 (DG1... 82 2e-013
gb|BG323138.1|BG323138 EM1_15_D03.g1_A002 Embryo 1 (EM1) So... 82 2e-013
gb|BG355798.1|BG355798 EM1_16_H05.g1_A002 Embryo 1 (EM1) So... 82 2e-013
gb|BG410804.1|BG410804 EM1_26_B07.g1_A002 Embryo 1 (EM1) So... 82 2e-013
gb|BG410903.1|BG410903 EM1_27_D04.g1_A002 Embryo 1 (EM1) So... 82 2e-013
gb|BG410934.1|BG410934 EM1_27_G07.g1_A002 Embryo 1 (EM1) So... 82 2e-013
gb|BG463018.1|BG463018 EM1_46_E08.g1_A002 Embryo 1 (EM1) So... 82 2e-013
gb|BG464460.1|BG464460 EM1_70_A09.g1_A002 Embryo 1 (EM1) So... 82 2e-013
gb|BG464578.1|BG464578 EM1_71_E05.g1_A002 Embryo 1 (EM1) So... 82 2e-013
gb|BG487644.1|BG487644 EM1_65_E09.g1_A002 Embryo 1 (EM1) So... 82 2e-013
gb|BG556081.1|BG556081 EM1_66_D09.b1_A002 Embryo 1 (EM1) So... 82 2e-013
gb|BG556390.1|BG556390 EM1_66_D09.g1_A002 Embryo 1 (EM1) So... 82 2e-013
gb|BG557179.1|BG557179 EM1_43_E12.g1_A002 Embryo 1 (EM1) So... 82 2e-013
gb|BG932964.1|BG932964 DG1_69_E07.g1_A002 Dark Grown 1 (DG1... 82 2e-013
gb|BG241060.1|BG241060 OV1_37_F11.b1_A002 Ovary 1 (OV1) Sor... 78 3e-012
gb|BH245670.1|BH245670 pSB1185.1 S. bicolor BTx623 PstI-dig... 76 1e-011
gb|CW160702.1|CW160702 104_567_11150024_148_36508_026 Sorgh... 74 4e-011
gb|CW322871.1|CW322871 104_816_11476333_116_35948_049 Sorgh... 74 4e-011
gb|BE358197.1|BE358197 DG1_26_C07.b2_A002 Dark Grown 1 (DG1... 74 4e-011
gb|BG649172.1|BG649172 EM1_77_D07.g1_A002 Embryo 1 (EM1) So... 74 4e-011
gb|CW030218.1|CW030218 104_258_10500126_116_30404 Sorghum m... 72 2e-010
gb|CW055936.1|CW055936 104_297_10517410_115_30173 Sorghum m... 72 2e-010
gb|CW163292.1|CW163292 104_570_11151386_148_36451_001 Sorgh... 72 2e-010
gb|CW198740.1|CW198740 104_623_11183135_148_37057_088 Sorgh... 72 2e-010
gb|CW270955.1|CW270955 104_742_11402728_148_35337_050 Sorgh... 72 2e-010
gb|CW400694.1|CW400694 fsbb001f091c05k0 Sorghum methylation... 72 2e-010
gb|AW679954.1|AW679954 WS1_33_A06.g1_A002 Water-stressed 1 ... 72 2e-010
gb|BE361929.1|BE361929 DG1_83_E05.b1_A002 Dark Grown 1 (DG1... 72 2e-010
gb|BF586981.1|BF586981 FM1_31_G12.b1_A003 Floral-Induced Me... 72 2e-010
gb|BG649149.1|BG649149 EM1_56_G02.b1_A002 Embryo 1 (EM1) So... 72 2e-010
gb|BM325212.1|BM325212 PIC1_41_B06.b1_A002 Pathogen-infecte... 72 2e-010
gb|BM325384.1|BM325384 PIC1_43_A01.b1_A002 Pathogen-infecte... 72 2e-010
gb|BM325399.1|BM325399 PIC1_44_A12.b1_A002 Pathogen-infecte... 72 2e-010
gb|BM325414.1|BM325414 PIC1_44_C05.b1_A002 Pathogen-infecte... 72 2e-010
gb|BM325649.1|BM325649 PIC1_47_B04.b1_A002 Pathogen-infecte... 72 2e-010
gb|BM325653.1|BM325653 PIC1_47_B09.b1_A002 Pathogen-infecte... 72 2e-010
gb|CD464055.1|CD464055 ETH1_48_F11.b1_A002 Ethylene-treated... 72 2e-010
gb|CN125219.1|CN125219 RHOH1_9_F05.g1_A002 Acid- and alkali... 72 2e-010
gb|CN132514.1|CN132514 OX1_6_D08.g1_A002 Oxidatively-stress... 72 2e-010
gb|CN132679.1|CN132679 OX1_7_C08.g1_A002 Oxidatively-stress... 72 2e-010
gb|CX610034.1|CX610034 ANR1_16_F04.b1_A002 Anaerobic roots ... 72 2e-010
gb|CW136008.1|CW136008 104_520_11118151_116_34836_018 Sorgh... 70 6e-010
gb|CW136009.1|CW136009 104_520_11118151_148_34832_018 Sorgh... 70 6e-010
gb|CW194869.1|CW194869 104_618_11180333_116_37427_027 Sorgh... 70 6e-010
gb|CW194870.1|CW194870 104_618_11180333_148_37428_027 Sorgh... 70 6e-010
gb|CW362939.1|CW362939 fsbb001f034d16k0 Sorghum methylation... 70 6e-010
gb|CW388564.1|CW388564 fsbb001f073g03f0 Sorghum methylation... 70 6e-010
gb|CW502212.1|CW502212 fsbb001f298h03f0 Sorghum methylation... 70 6e-010
gb|BF586899.1|BF586899 FM1_31_G12.g1_A003 Floral-Induced Me... 70 6e-010
gb|CD204633.1|CD204633 HS1_9_F10.b1_A012 Heat-shocked seedl... 70 6e-010
gb|CL191862.1|CL191862 104_414_10939844_114_32246_076 Sorgh... 68 3e-009
gb|BE355597.1|BE355597 DG1_115_H08.g1_A002 Dark Grown 1 (DG... 68 3e-009
gb|CD225797.1|CD225797 CCC1_41_D11.g1_A007 Callus culture/c... 68 3e-009
gb|CW252102.1|CW252102 104_715_11224308_148_35093_048 Sorgh... 66 1e-008
gb|CW313071.1|CW313071 104_803_11471096_116_35785_028 Sorgh... 66 1e-008
gb|CW356149.1|CW356149 fsbb001f021b12k0 Sorghum methylation... 66 1e-008
gb|CW031141.1|CW031141 104_259_10500633_114_30397 Sorghum m... 64 4e-008
gb|CW165466.1|CW165466 104_573_11152520_116_36471_018 Sorgh... 64 4e-008
gb|CW212544.1|CW212544 104_643_11191078_148_37020_083 Sorgh... 64 4e-008
gb|CW213446.1|CW213446 104_645_11191549_148_37035_063 Sorgh... 64 4e-008
gb|CW270954.1|CW270954 104_742_11402728_116_35333_050 Sorgh... 64 4e-008
gb|CW378672.1|CW378672 fsbb001f057i18k0 Sorghum methylation... 64 4e-008
gb|CW411512.1|CW411512 fsbb001f106l13f0 Sorghum methylation... 64 4e-008
gb|CW453444.1|CW453444 fsbb001f197h05k0 Sorghum methylation... 64 4e-008
gb|CW501703.1|CW501703 fsbb001f297k14f0 Sorghum methylation... 64 4e-008
gb|BE125214.1|BE125214 DG1_16_H11.b1_A002 Dark Grown 1 (DG1... 64 4e-008
gb|BE355591.1|BE355591 DG1_115_B07.b1_A002 Dark Grown 1 (DG... 64 4e-008
gb|BE358196.1|BE358196 DG1_26_C08.b2_A002 Dark Grown 1 (DG1... 64 4e-008
gb|CD223573.1|CD223573 CCC1_28_C04.g1_A007 Callus culture/c... 64 4e-008
gb|CD227768.1|CD227768 CCC1_53_G12.g1_A007 Callus culture/c... 64 4e-008
gb|CX611664.1|CX611664 ANR1_26_A12.b1_A002 Anaerobic roots ... 64 4e-008
gb|CW029241.1|CW029241 104_256_10499562_114_30399 Sorghum m... 62 2e-007
gb|CW059089.1|CW059089 104_301_10519111_114_30160 Sorghum m... 62 2e-007
gb|CW129786.1|CW129786 104_512_11114754_148_34773_079 Sorgh... 62 2e-007
gb|CW158105.1|CW158105 104_561_11147877_148_36388_083 Sorgh... 62 2e-007
gb|CW241171.1|CW241171 104_700_11218620_148_37541_044 Sorgh... 62 2e-007
gb|CW444220.1|CW444220 fsbb001f164l08k0 Sorghum methylation... 62 2e-007
gb|BG053668.1|BG053668 RHIZ2_8_C07.b1_A003 Rhizome2 (RHIZ2)... 62 2e-007
gb|CN129042.1|CN129042 RHOH1_33_D12.b3_A002 Acid- and alkal... 62 2e-007
gb|CN129126.1|CN129126 RHOH1_33_D12.g1_A002 Acid- and alkal... 62 2e-007
gb|CN129217.1|CN129217 RHOH1_34_D12.b3_A002 Acid- and alkal... 62 2e-007
gb|CN129305.1|CN129305 RHOH1_34_D12.g1_A002 Acid- and alkal... 62 2e-007
gb|CN138835.1|CN138835 OX1_14_F05.b1_A002 Oxidatively-stres... 62 2e-007
gb|CW179018.1|CW179018 104_593_11159877_148_36627_095 Sorgh... 60 6e-007
gb|CW398251.1|CW398251 fsbb001f087j18k0 Sorghum methylation... 60 6e-007
gb|CW494484.1|CW494484 fsbb001f285m17k0 Sorghum methylation... 60 6e-007
gb|AW922803.1|AW922803 DG1_46_G10.g1_A002 Dark Grown 1 (DG1... 60 6e-007
gb|BE355654.1|BE355654 DG1_115_B07.g1_A002 Dark Grown 1 (DG... 60 6e-007
gb|BF177182.1|BF177182 EM1_2_G05.b1_A002 Embryo 1 (EM1) Sor... 60 6e-007
gb|CW173761.1|CW173761 104_585_11157023_116_36554_088 Sorgh... 58 2e-006
gb|BE595704.1|BE595704 PI1_55_F10.g1_A002 Pathogen induced ... 58 2e-006
gb|BM327931.1|BM327931 PIC1_19_B10.g1_A002 Pathogen-infecte... 58 2e-006
gb|CB928194.1|CB928194 ABA1_37_H04.b1_A012 Abscisic acid-tr... 58 2e-006
gb|CD203811.1|CD203811 HS1_2_G07.b1_A012 Heat-shocked seedl... 58 2e-006
gb|CD208510.1|CD208510 HS1_38_A10.b1_A012 Heat-shocked seed... 58 2e-006
gb|CD430945.1|CD430945 ETH1_6_G04.b1_A002 Ethylene-treated ... 58 2e-006
gb|CF428096.1|CF428096 PH1_12_C06.g1_A002 Phosphorous-defic... 58 2e-006
gb|BZ627370.1|BZ627370 ih52a08.g1 WGS-SbicolorF (DH5a methy... 56 1e-005
gb|CL189948.1|CL189948 104_407_10905735_114_32477_054 Sorgh... 56 1e-005
gb|CL189949.1|CL189949 104_407_10905735_116_32481_054 Sorgh... 56 1e-005
gb|CW045639.1|CW045639 104_282_10509694_114_30229 Sorghum m... 56 1e-005
gb|CW216094.1|CW216094 104_648_11194930_116_37120_035 Sorgh... 56 1e-005
gb|CW220225.1|CW220225 104_654_11197238_148_37151_051 Sorgh... 56 1e-005
gb|CW230933.1|CW230933 104_680_11210859_116_37343_016 Sorgh... 56 1e-005
gb|CW230934.1|CW230934 104_680_11210859_148_37339_016 Sorgh... 56 1e-005
gb|CW296838.1|CW296838 104_778_11461727_116_35630_084 Sorgh... 56 1e-005
gb|CW303448.1|CW303448 104_788_11465244_116_35692_048 Sorgh... 56 1e-005
gb|CW402151.1|CW402151 fsbb001f093e23f0 Sorghum methylation... 56 1e-005
gb|AW286067.2|AW286067 LG1_261_A04.b1_A002 Light Grown 1 (L... 56 1e-005
gb|AW286126.2|AW286126 LG1_261_G03.b1_A002 Light Grown 1 (L... 56 1e-005
gb|AW287009.2|AW287009 LG1_264_D02.b1_A002 Light Grown 1 (L... 56 1e-005
gb|AW680833.1|AW680833 WS1_7_A02.g1_A002 Water-stressed 1 (... 56 1e-005
gb|BE125370.1|BE125370 DG1_20_A12.b1_A002 Dark Grown 1 (DG1... 56 1e-005
gb|BE125550.1|BE125550 DG1_28_A12.b1_A002 Dark Grown 1 (DG1... 56 1e-005
gb|BE357460.1|BE357460 DG1_20_A12.b2_A002 Dark Grown 1 (DG1... 56 1e-005
gb|BE358106.1|BE358106 DG1_24_H03.b1_A002 Dark Grown 1 (DG1... 56 1e-005
gb|BE594576.1|BE594576 PI1_34_H08.b1_A002 Pathogen induced ... 56 1e-005
gb|BE595203.1|BE595203 PI1_47_C03.b1_A002 Pathogen induced ... 56 1e-005
gb|BF177035.1|BF177035 EM1_2_G05.g1_A002 Embryo 1 (EM1) Sor... 56 1e-005
gb|BG463250.1|BG463250 EM1_48_C07.b1_A002 Embryo 1 (EM1) So... 56 1e-005
gb|BG464335.1|BG464335 EM1_72_E03.b1_A002 Embryo 1 (EM1) So... 56 1e-005
gb|BM322462.1|BM322462 PIC1_5_B04.b1_A002 Pathogen-infected... 56 1e-005
gb|BM322579.1|BM322579 PIC1_6_F03.b1_A002 Pathogen-infected... 56 1e-005
gb|BM322643.1|BM322643 PIC1_7_D02.b1_A002 Pathogen-infected... 56 1e-005
gb|BM323497.1|BM323497 PIC1_20_A05.b1_A002 Pathogen-infecte... 56 1e-005
gb|BM323949.1|BM323949 PIC1_29_E10.b1_A002 Pathogen-infecte... 56 1e-005
gb|BM325571.1|BM325571 PIC1_46_C05.b1_A002 Pathogen-infecte... 56 1e-005
gb|BM325862.1|BM325862 PIC1_53_G02.b1_A002 Pathogen-infecte... 56 1e-005
gb|CB925037.1|CB925037 ABA1_29_F09.g1_A012 Abscisic acid-tr... 56 1e-005
gb|CB925673.1|CB925673 ABA1_22_H09.g1_A012 Abscisic acid-tr... 56 1e-005
gb|CB926068.1|CB926068 ABA1_31_G08.g1_A012 Abscisic acid-tr... 56 1e-005
gb|CB926511.1|CB926511 ABA1_9_A06.g1_A012 Abscisic acid-tre... 56 1e-005
gb|CB926991.1|CB926991 ABA1_11_G02.g1_A012 Abscisic acid-tr... 56 1e-005
gb|CB927579.1|CB927579 ABA1_26_G05.g1_A012 Abscisic acid-tr... 56 1e-005
gb|CB928411.1|CB928411 ABA1_15_H10.g1_A012 Abscisic acid-tr... 56 1e-005
gb|CB928440.1|CB928440 ABA1_15_E08.g1_A012 Abscisic acid-tr... 56 1e-005
gb|CD204221.1|CD204221 HS1_4_C01.g1_A012 Heat-shocked seedl... 56 1e-005
gb|CD204582.1|CD204582 HS1_8_A07.g1_A012 Heat-shocked seedl... 56 1e-005
gb|CD204738.1|CD204738 HS1_9_F10.g1_A012 Heat-shocked seedl... 56 1e-005
gb|CD205069.1|CD205069 HS1_11_F03.g1_A012 Heat-shocked seed... 56 1e-005
gb|CD205328.1|CD205328 HS1_13_H04.g1_A012 Heat-shocked seed... 56 1e-005
gb|CD205682.1|CD205682 HS1_15_G04.g1_A012 Heat-shocked seed... 56 1e-005
gb|CD205701.1|CD205701 HS1_15_G09.g1_A012 Heat-shocked seed... 56 1e-005
gb|CD205830.1|CD205830 HS1_18_H07.g1_A012 Heat-shocked seed... 56 1e-005
gb|CD206732.1|CD206732 HS1_24_G11.g1_A012 Heat-shocked seed... 56 1e-005
gb|CD207758.1|CD207758 HS1_34_D12.g1_A012 Heat-shocked seed... 56 1e-005
gb|CD207776.1|CD207776 HS1_34_E06.g1_A012 Heat-shocked seed... 56 1e-005
gb|CD208003.1|CD208003 HS1_36_D03.g1_A012 Heat-shocked seed... 56 1e-005
gb|CD208465.1|CD208465 HS1_37_G05.g1_A012 Heat-shocked seed... 56 1e-005
gb|CD209589.1|CD209589 HS1_43_C08.g1_A012 Heat-shocked seed... 56 1e-005
gb|CD211053.1|CD211053 HS1_58_G10.g1_A012 Heat-shocked seed... 56 1e-005
gb|CD212367.1|CD212367 HS1_30_A04.g1_A012 Heat-shocked seed... 56 1e-005
gb|CD213275.1|CD213275 HS1_29_E10.g1_A012 Heat-shocked seed... 56 1e-005
gb|CD213739.1|CD213739 HS1_52_A06.g1_A012 Heat-shocked seed... 56 1e-005
gb|CD213882.1|CD213882 HS1_53_F04.g1_A012 Heat-shocked seed... 56 1e-005
gb|CD213968.1|CD213968 HS1_69_H11.g1_A012 Heat-shocked seed... 56 1e-005
gb|CD214165.1|CD214165 HS1_70_H11.g1_A012 Heat-shocked seed... 56 1e-005
gb|CD221277.1|CD221277 CCC1_74_H06.g1_A007 Callus culture/c... 56 1e-005
gb|CD221613.1|CD221613 CCC1_55_F12.g1_A007 Callus culture/c... 56 1e-005
gb|CD227366.1|CD227366 CCC1_50_A08.g1_A007 Callus culture/c... 56 1e-005
gb|CD230725.1|CD230725 SS1_47_D10.g1_A012 Salt-stressed see... 56 1e-005
gb|CD230836.1|CD230836 SS1_9_B01.g1_A012 Salt-stressed seed... 56 1e-005
gb|CD231208.1|CD231208 SS1_8_A09.g1_A012 Salt-stressed seed... 56 1e-005
gb|CD231621.1|CD231621 SS1_22_G05.g1_A012 Salt-stressed see... 56 1e-005
gb|CD232894.1|CD232894 SS1_10_H03.g1_A012 Salt-stressed see... 56 1e-005
gb|CD233534.1|CD233534 SS1_2_B06.g1_A012 Salt-stressed seed... 56 1e-005
gb|CD233663.1|CD233663 SS1_3_H07.g1_A012 Salt-stressed seed... 56 1e-005
gb|CD425105.1|CD425105 SA1_10_F01.g1_A002 Salicylic acid-tr... 56 1e-005
gb|CD427970.1|CD427970 ETH1_36_D09.g1_A002 Ethylene-treated... 56 1e-005
gb|CD463014.1|CD463014 ETH1_41_B03.g1_A002 Ethylene-treated... 56 1e-005
gb|CD463016.1|CD463016 ETH1_41_A03.g1_A002 Ethylene-treated... 56 1e-005
gb|CD463454.1|CD463454 ETH1_44_F08.g1_A002 Ethylene-treated... 56 1e-005
gb|CD464119.1|CD464119 ETH1_48_F11.g1_A002 Ethylene-treated... 56 1e-005
gb|CF428076.1|CF428076 PH1_12_A01.g1_A002 Phosphorous-defic... 56 1e-005
gb|CF428805.1|CF428805 PH1_17_B11.g1_A002 Phosphorous-defic... 56 1e-005
gb|CF429055.1|CF429055 PH1_19_A05.g1_A002 Phosphorous-defic... 56 1e-005
gb|CF430652.1|CF430652 NIT1_3_H01.g1_A002 Nitrogen-deficien... 56 1e-005
gb|CF430822.1|CF430822 NIT1_2_D02.g1_A002 Nitrogen-deficien... 56 1e-005
gb|CF431060.1|CF431060 NIT1_4_D05.g1_A002 Nitrogen-deficien... 56 1e-005
gb|CF432577.1|CF432577 NIT1_17_B02.g1_A002 Nitrogen-deficie... 56 1e-005
gb|CF433176.1|CF433176 NIT1_25_B04.g1_A002 Nitrogen-deficie... 56 1e-005
gb|CF433372.1|CF433372 NIT1_26_H07.g1_A002 Nitrogen-deficie... 56 1e-005
gb|CF433520.1|CF433520 NIT1_27_F03.g1_A002 Nitrogen-deficie... 56 1e-005
gb|CF433676.1|CF433676 NIT1_28_A11.g1_A002 Nitrogen-deficie... 56 1e-005
gb|CF433831.1|CF433831 NIT1_30_H02.g1_A002 Nitrogen-deficie... 56 1e-005
gb|CF433902.1|CF433902 NIT1_30_C05.g1_A002 Nitrogen-deficie... 56 1e-005
gb|CF434209.1|CF434209 NIT1_32_H07.g1_A002 Nitrogen-deficie... 56 1e-005
gb|CF756847.1|CF756847 DSAF1_10_C10.g1_A011 Drought-stresse... 56 1e-005
gb|CN124390.1|CN124390 RHOH1_4_B01.g1_A002 Acid- and alkali... 56 1e-005
gb|CN126529.1|CN126529 RHOH1_17_E07.g1_A002 Acid- and alkal... 56 1e-005
gb|CN127884.1|CN127884 RHOH1_25_D10.g1_A002 Acid- and alkal... 56 1e-005
gb|CN132651.1|CN132651 OX1_7_A02.g1_A002 Oxidatively-stress... 56 1e-005
gb|CN133182.1|CN133182 OX1_10_D10.g1_A002 Oxidatively-stres... 56 1e-005
gb|CN134362.1|CN134362 OX1_25_H11.g1_A002 Oxidatively-stres... 56 1e-005
gb|CN136496.1|CN136496 OX1_43_A07.g1_A002 Oxidatively-stres... 56 1e-005
gb|CN136823.1|CN136823 OX1_53_B08.g1_A002 Oxidatively-stres... 56 1e-005
gb|CN138452.1|CN138452 OX1_63_H03.g1_A002 Oxidatively-stres... 56 1e-005
gb|CN138894.1|CN138894 OX1_14_F05.g1_A002 Oxidatively-stres... 56 1e-005
gb|CN143165.1|CN143165 WOUND1_14_B11.g1_A002 Wounded leaves... 56 1e-005
gb|CN145711.1|CN145711 WOUND1_34_F02.g1_A002 Wounded leaves... 56 1e-005
gb|CN150502.1|CN150502 WOUND1_69_D02.g1_A002 Wounded leaves... 56 1e-005
gb|CN150957.1|CN150957 WOUND1_72_C01.g1_A002 Wounded leaves... 56 1e-005
gb|CX607276.1|CX607276 ANR1_7_D11.g1_A002 Anaerobic roots S... 56 1e-005
gb|CX607414.1|CX607414 ANR1_8_B12.g1_A002 Anaerobic roots S... 56 1e-005
gb|CX608278.1|CX608278 ANR1_37_E03.g1_A002 Anaerobic roots ... 56 1e-005
gb|CX608312.1|CX608312 ANR1_37_H05.g1_A002 Anaerobic roots ... 56 1e-005
gb|CX608460.1|CX608460 ANR1_38_F03.g1_A002 Anaerobic roots ... 56 1e-005
gb|CX608753.1|CX608753 ANR1_40_B09.g1_A002 Anaerobic roots ... 56 1e-005
gb|CX609438.1|CX609438 ANR1_12_E03.g1_A002 Anaerobic roots ... 56 1e-005
gb|CX610067.1|CX610067 ANR1_16_A02.g1_A002 Anaerobic roots ... 56 1e-005
gb|CX610121.1|CX610121 ANR1_16_F04.g1_A002 Anaerobic roots ... 56 1e-005
gb|CX610128.1|CX610128 ANR1_16_F11.g1_A002 Anaerobic roots ... 56 1e-005
gb|CX610131.1|CX610131 ANR1_16_G03.g1_A002 Anaerobic roots ... 56 1e-005
gb|CX610295.1|CX610295 ANR1_17_F08.g1_A002 Anaerobic roots ... 56 1e-005
gb|CX610298.1|CX610298 ANR1_17_G01.g1_A002 Anaerobic roots ... 56 1e-005
gb|CX611746.1|CX611746 ANR1_26_A12.g1_A002 Anaerobic roots ... 56 1e-005
gb|CX612341.1|CX612341 GABR1_1_H06.g1_A002 GA- or brassinol... 56 1e-005
gb|CX613859.1|CX613859 GABR1_10_D01.g1_A002 GA- or brassino... 56 1e-005
gb|CX614011.1|CX614011 GABR1_11_C02.g1_A002 GA- or brassino... 56 1e-005
gb|CX614027.1|CX614027 GABR1_11_D06.g1_A002 GA- or brassino... 56 1e-005
gb|CX614710.1|CX614710 GABR1_15_G03.g1_A002 GA- or brassino... 56 1e-005
gb|CX615059.1|CX615059 GABR1_17_H07.g1_A002 GA- or brassino... 56 1e-005
gb|CX615183.1|CX615183 GABR1_18_D09.g1_A002 GA- or brassino... 56 1e-005
gb|CX616076.1|CX616076 GABR1_25_E06.g1_A002 GA- or brassino... 56 1e-005
gb|CX616605.1|CX616605 GABR1_28_H05.g1_A002 GA- or brassino... 56 1e-005
gb|CX617732.1|CX617732 GABR1_35_A10.g1_A002 GA- or brassino... 56 1e-005
gb|CX619172.1|CX619172 GABR1_43_H11.g1_A002 GA- or brassino... 56 1e-005
gb|CX619896.1|CX619896 GABR1_48_C04.g1_A002 GA- or brassino... 56 1e-005
gb|CX620103.1|CX620103 GABR1_49_G12.g1_A002 GA- or brassino... 56 1e-005
gb|CX620437.1|CX620437 GABR1_51_G10.g1_A002 GA- or brassino... 56 1e-005
gb|CX620536.1|CX620536 GABR1_52_B01.g1_A002 GA- or brassino... 56 1e-005
gb|CX621332.1|CX621332 GABR1_57_B09.g1_A002 GA- or brassino... 56 1e-005
gb|CX621497.1|CX621497 GABR1_58_A09.g1_A002 GA- or brassino... 56 1e-005
gb|CX621520.1|CX621520 GABR1_58_C09.g1_A002 GA- or brassino... 56 1e-005
gb|CX621561.1|CX621561 GABR1_58_G06.g1_A002 GA- or brassino... 56 1e-005
gb|CX622181.1|CX622181 GABR1_62_B01.g2_A002 GA- or brassino... 56 1e-005
gb|CX622569.1|CX622569 GABR1_64_F01.g2_A002 GA- or brassino... 56 1e-005
gb|CX623053.1|CX623053 GABR1_67_A12.g1_A002 GA- or brassino... 56 1e-005
gb|CX623109.1|CX623109 GABR1_67_F11.g1_A002 GA- or brassino... 56 1e-005
gb|CX623270.1|CX623270 GABR1_68_E04.g1_A002 GA- or brassino... 56 1e-005
gb|CW252101.1|CW252101 104_715_11224308_116_35097_048 Sorgh... 54 4e-005
gb|BF586275.1|BF586275 FM1_27_H04.b1_A003 Floral-Induced Me... 54 4e-005
gb|BF587240.1|BF587240 FM1_33_H09.b2_A003 Floral-Induced Me... 54 4e-005
gb|BF705354.1|BF705354 RHIZ2_3_A02.b1_A003 Rhizome2 (RHIZ2)... 54 4e-005
gb|BG559441.1|BG559441 RHIZ2_54_H05.b1_A003 Rhizome2 (RHIZ2... 54 4e-005
gb|CD208429.1|CD208429 HS1_37_A11.g1_A012 Heat-shocked seed... 54 4e-005
gb|CD210321.1|CD210321 HS1_50_D01.g1_A012 Heat-shocked seed... 54 4e-005
gb|CD229336.1|CD229336 CCC1_14_B08.g1_A007 Callus culture/c... 54 4e-005
gb|CD462818.1|CD462818 ETH1_40_G12.b1_A002 Ethylene-treated... 54 4e-005
gb|CN139928.1|CN139928 OX1_33_B03.b1_A002 Oxidatively-stres... 54 4e-005
gb|CX607300.1|CX607300 ANR1_7_F11.g1_A002 Anaerobic roots S... 54 4e-005
gb|CX611343.1|CX611343 ANR1_24_D02.b1_A002 Anaerobic roots ... 54 4e-005
gb|CX611431.1|CX611431 ANR1_24_D02.g1_A002 Anaerobic roots ... 54 4e-005
gb|BG355799.1|BG355799 EM1_16_H06.g1_A002 Embryo 1 (EM1) So... 52 1e-004
gb|CN127802.1|CN127802 RHOH1_25_D10.b1_A002 Acid- and alkal... 52 1e-004
gb|AW923276.1|AW923276 DG1_50_F04.g1_A002 Dark Grown 1 (DG1... 50 6e-004
gb|BE361701.1|BE361701 DG1_81_D12.g1_A002 Dark Grown 1 (DG1... 50 6e-004
gb|BE362045.1|BE362045 DG1_83_A08.g1_A002 Dark Grown 1 (DG1... 50 6e-004
gb|BF656807.1|BF656807 OV2_23_B10.g1_A002 Ovary 2 (OV2) Sor... 50 6e-004
gb|BF657020.1|BF657020 OV2_18_B08.g1_A002 Ovary 2 (OV2) Sor... 50 6e-004
gb|BG240742.1|BG240742 OV1_37_F11.g1_A002 Ovary 1 (OV1) Sor... 50 6e-004
gb|BG273338.1|BG273338 OV2_27_B05.g1_A002 Ovary 2 (OV2) Sor... 50 6e-004
gb|CB926283.1|CB926283 ABA1_7_D10.g1_A012 Abscisic acid-tre... 50 6e-004
gb|CD207274.1|CD207274 HS1_62_C07.g1_A012 Heat-shocked seed... 50 6e-004
gb|CD220759.1|CD220759 CCC1_69_A06.b1_A007 Callus culture/c... 50 6e-004
gb|CD225692.1|CD225692 CCC1_41_D11.b1_A007 Callus culture/c... 50 6e-004
gb|CD227979.1|CD227979 CCC1_5_D03.b1_A007 Callus culture/ce... 50 6e-004
gb|BZ329505.1|BZ329505 hv86c10.b1 WGS-SbicolorF (JM107 adap... 48 0.002
gb|CW238807.1|CW238807 104_695_11216932_116_37418_002 Sorgh... 48 0.002
gb|CW263899.1|CW263899 104_732_11230980_148_35238_042 Sorgh... 48 0.002
gb|CW286711.1|CW286711 104_764_11411032_148_35520_056 Sorgh... 48 0.002
gb|CW313072.1|CW313072 104_803_11471096_148_35789_028 Sorgh... 48 0.002
gb|CW365196.1|CW365196 fsbb001f037j24f0 Sorghum methylation... 48 0.002
gb|AW677242.1|AW677242 DG1_6_G07.g1_A002 Dark Grown 1 (DG1)... 48 0.002
gb|BG102961.1|BG102961 RHIZ2_35_D11.b1_A003 Rhizome2 (RHIZ2... 48 0.002
gb|CB924683.1|CB924683 ABA1_1_G06.g1_A012 Abscisic acid-tre... 48 0.002
gb|CB925817.1|CB925817 ABA1_23_F12.g1_A012 Abscisic acid-tr... 48 0.002
gb|CB925947.1|CB925947 ABA1_30_F12.g1_A012 Abscisic acid-tr... 48 0.002
gb|CB927552.1|CB927552 ABA1_26_E04.g1_A012 Abscisic acid-tr... 48 0.002
gb|CD207578.1|CD207578 HS1_33_B03.g1_A012 Heat-shocked seed... 48 0.002
gb|CD224053.1|CD224053 CCC1_31_A07.g1_A007 Callus culture/c... 48 0.002
gb|CN125561.1|CN125561 RHOH1_11_G07.g1_A002 Acid- and alkal... 48 0.002
gb|CN128642.1|CN128642 RHOH1_30_F04.g1_A002 Acid- and alkal... 48 0.002
gb|CN140011.1|CN140011 OX1_33_B03.g1_A002 Oxidatively-stres... 48 0.002
gb|CN145653.1|CN145653 WOUND1_34_H07.b1_A002 Wounded leaves... 48 0.002
gb|CN145735.1|CN145735 WOUND1_34_H07.g1_A002 Wounded leaves... 48 0.002
gb|CX606946.1|CX606946 ANR1_5_G07.g1_A002 Anaerobic roots S... 48 0.002
gb|CX610303.1|CX610303 ANR1_17_G06.g1_A002 Anaerobic roots ... 48 0.002
gb|CX613328.1|CX613328 GABR1_7_C03.g1_A002 GA- or brassinol... 48 0.002
gb|CX613832.1|CX613832 GABR1_10_A09.g1_A002 GA- or brassino... 48 0.002
gb|CX615230.1|CX615230 GABR1_18_H10.g1_A002 GA- or brassino... 48 0.002
gb|CL180768.1|CL180768 104_391_10896252_116_31928_012 Sorgh... 46 0.009
gb|CW031142.1|CW031142 104_259_10500633_116_30398 Sorghum m... 46 0.009
gb|CW165467.1|CW165467 104_573_11152520_148_36474_018 Sorgh... 46 0.009
gb|CW270328.1|CW270328 104_741_11402351_116_35324_082 Sorgh... 46 0.009
gb|CW292730.1|CW292730 104_772_11414241_116_35579_033 Sorgh... 46 0.009
gb|AW680339.1|AW680339 WS1_51_C06.g1_A002 Water-stressed 1 ... 46 0.009
gb|BE359044.1|BE359044 DG1_38_B01.b1_A002 Dark Grown 1 (DG1... 46 0.009
gb|BE359118.1|BE359118 DG1_38_B01.g1_A002 Dark Grown 1 (DG1... 46 0.009
gb|BF176756.1|BF176756 EM1_4_G05.g1_A002 Embryo 1 (EM1) Sor... 46 0.009
gb|BF481689.1|BF481689 FM1_21_B09.b1_A003 Floral-Induced Me... 46 0.009
gb|BG049618.1|BG049618 EM1_6_F09.g1_A002 Embryo 1 (EM1) Sor... 46 0.009
gb|BG464494.1|BG464494 EM1_70_D12.g1_A002 Embryo 1 (EM1) So... 46 0.009
gb|BG464739.1|BG464739 EM1_33_D10.g1_A002 Embryo 1 (EM1) So... 46 0.009
gb|BG556991.1|BG556991 EM1_41_B12.g1_A002 Embryo 1 (EM1) So... 46 0.009
gb|BG355923.2|BG355923 EM1_18_C12.g1_A002 Embryo 1 (EM1) So... 46 0.009
gb|CD210453.1|CD210453 HS1_51_B05.g1_A012 Heat-shocked seed... 46 0.009
gb|CD210646.1|CD210646 HS1_48_F06.g1_A012 Heat-shocked seed... 46 0.009
gb|CD229253.1|CD229253 CCC1_14_B08.b1_A007 Callus culture/c... 46 0.009
gb|CD432517.1|CD432517 ETH1_30_H01.g1_A002 Ethylene-treated... 46 0.009
gb|CD462480.1|CD462480 ETH1_37_B06.g1_A002 Ethylene-treated... 46 0.009
gb|CF429397.1|CF429397 PH1_21_C12.g1_A002 Phosphorous-defic... 46 0.009
gb|CF432896.1|CF432896 NIT1_19_D03.g1_A002 Nitrogen-deficie... 46 0.009
gb|CF433070.1|CF433070 NIT1_20_F09.g1_A002 Nitrogen-deficie... 46 0.009
gb|CF434379.1|CF434379 NIT1_29_H12.g1_A002 Nitrogen-deficie... 46 0.009
gb|CX609299.1|CX609299 ANR1_11_G11.g1_A002 Anaerobic roots ... 46 0.009
gb|CX614875.1|CX614875 GABR1_16_H02.g1_A002 GA- or brassino... 46 0.009
gb|CX616100.1|CX616100 GABR1_25_G07.g1_A002 GA- or brassino... 46 0.009
gb|CL160524.1|CL160524 104_351_10805051_114_31824_107 Sorgh... 44 0.036
gb|CW068361.1|CW068361 104_317_10525083_1_30096 Sorghum met... 44 0.036
gb|CW125826.1|CW125826 104_506_11112548_148_34725_076 Sorgh... 44 0.036
gb|CW251908.1|CW251908 104_714_11224195_148_35070_068 Sorgh... 44 0.036
gb|CW300392.1|CW300392 104_783_11463632_116_36252_020 Sorgh... 44 0.036
gb|BF480850.1|BF480850 FM1_14_B02.g1_A003 Floral-Induced Me... 44 0.036
gb|BF481177.1|BF481177 FM1_17_D04.g1_A003 Floral-Induced Me... 44 0.036
gb|BG050507.1|BG050507 FM1_70_C06.g1_A003 Floral-Induced Me... 44 0.036
gb|BG051257.1|BG051257 FM1_54_B10.g1_A003 Floral-Induced Me... 44 0.036
gb|BG051445.1|BG051445 FM1_56_E09.g1_A003 Floral-Induced Me... 44 0.036
gb|BG051716.1|BG051716 FM1_60_D08.g1_A003 Floral-Induced Me... 44 0.036
gb|CD223470.1|CD223470 CCC1_28_C04.b1_A007 Callus culture/c... 44 0.036
gb|CF756733.1|CF756733 DSAF1_8_E10.g1_A011 Drought-stressed... 44 0.036
gb|CX616101.1|CX616101 GABR1_25_G08.g1_A002 GA- or brassino... 44 0.036
gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region,... 44 0.036
gb|BZ345273.1|BZ345273 hr48e02.b1 WGS-SbicolorF (JM107 adap... 42 0.14
gb|CL166890.1|CL166890 104_363_10809690_114_31800_138 Sorgh... 42 0.14
gb|CL171331.1|CL171331 104_373_10889353_116_31777_025 Sorgh... 42 0.14
gb|CL171332.1|CL171332 104_373_10889353_148_31776_025 Sorgh... 42 0.14
gb|CW024241.1|CW024241 104_164_10434844_1_30002 Sorghum met... 42 0.14
gb|CW107026.1|CW107026 104_477_11096330_148_34473_015 Sorgh... 42 0.14
gb|CW121015.1|CW121015 104_498_11109657_116_34649_035 Sorgh... 42 0.14
gb|CW208093.1|CW208093 104_637_11188494_116_37044_023 Sorgh... 42 0.14
gb|CW229843.1|CW229843 104_671_11207532_116_37268_042 Sorgh... 42 0.14
gb|CW316235.1|CW316235 104_807_11472787_116_35840_070 Sorgh... 42 0.14
gb|CW407661.1|CW407661 fsbb001f101d21f0 Sorghum methylation... 42 0.14
gb|CW500851.1|CW500851 fsbb001f296g02k0 Sorghum methylation... 42 0.14
gb|AW923265.1|AW923265 DG1_50_E02.g1_A002 Dark Grown 1 (DG1... 42 0.14
gb|BE357549.1|BE357549 DG1_21_H01.b1_A002 Dark Grown 1 (DG1... 42 0.14
gb|BE362543.1|BE362543 DG1_87_A06.g1_A002 Dark Grown 1 (DG1... 42 0.14
gb|BG411392.1|BG411392 EM1_57_F06.g1_A002 Embryo 1 (EM1) So... 42 0.14
gb|BG556555.1|BG556555 EM1_38_G02.g1_A002 Embryo 1 (EM1) So... 42 0.14
gb|CD208274.1|CD208274 HS1_32_A06.g1_A012 Heat-shocked seed... 42 0.14
gb|CD227837.1|CD227837 CCC1_56_B01.b1_A007 Callus culture/c... 42 0.14
gb|AC169375.3| Sorghum bicolor clone SB_BBc0020O07, WORKING... 42 0.14
>gb|CD222123.1|CD222123 CCC1_2_A08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_2_A08_A007 3', mRNA sequence
Length = 620
Score = 492 bits (248), Expect = e-137
Identities = 350/384 (91%)
Strand = Plus / Minus
Query: 297 gtaggtgtccttcacagggtaggacgcgtccatggcgatgccgcacttgcccgtgggccg 356
|||||| |||||||| ||||| |||||||||||||||||||| ||||| ||| ||||
Sbjct: 391 gtaggtatccttcaccgggtacgacgcgtccatggcgatgccacactttcccacgggcaa 332
Query: 357 gggcacgttgcgcctcatgcggatgtagccggcctcgccccagctggcgctccacgagtt 416
|||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 331 aaacacgttgcgcctgatgcggatgtagccggcctcgccccagctgtcgctccacgagtt 272
Query: 417 cttcacgatccagtagtccttgccgctctcgctgccgtagcccaccgccgtgacgccgtg 476
|||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 271 cttcacgatccagtaggccttgccgttctcgctgccgtagcccaccaccgtgacgccgtg 212
Query: 477 gtccaggctcgtcccgcatggcccgttgaagatgcccgaactgtagtgctggaacgcacg 536
||||||| |||||||||| |||||||||||||||||||| |||||||| |||||||||||
Sbjct: 211 gtccaggttcgtcccgcacggcccgttgaagatgcccgagctgtagtgttggaacgcacg 152
Query: 537 cccgcctgcgtcgatggcgacactgacgggctggatcgccaccgcctcctgcagcgccgt 596
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 151 tccgccggcgtcgatggcgacgctgacgggctggatcgccaccgcctcctgcagcgccgt 92
Query: 597 ctcgttgttgctcgccacctccaccaacccatctatggtggcgaccttctcgttcttctc 656
|||||||||||||||||||||||| ||||||||||||| ||||||||| || | ||| |
Sbjct: 91 ctcgttgttgctcgccacctccacgaacccatctatggcggcgaccttttcatcgttcgc 32
Query: 657 cttgctggcgtcacaagtgccgtc 680
|||| |||| ||||| ||||||||
Sbjct: 31 cttgttggcatcacaggtgccgtc 8
Score = 50.1 bits (25), Expect = 6e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 231 ctaagcaagaaccatcttgatcacatccatggc 263
||||||||| |||||||||| ||||||||||||
Sbjct: 439 ctaagcaaggaccatcttgagcacatccatggc 407
>gb|CD225063.1|CD225063 CCC1_38_C02.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_38_C02_A007 3', mRNA sequence
Length = 562
Score = 470 bits (237), Expect = e-130
Identities = 309/333 (92%)
Strand = Plus / Minus
Query: 297 gtaggtgtccttcacagggtaggacgcgtccatggcgatgccgcacttgcccgtgggccg 356
||||||||||||||| ||||| |||||||||||||||||||| ||||| ||| ||||
Sbjct: 333 gtaggtgtccttcaccgggtacgacgcgtccatggcgatgccacactttcccacgggcaa 274
Query: 357 gggcacgttgcgcctcatgcggatgtagccggcctcgccccagctggcgctccacgagtt 416
|||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 273 aaacacgttgcgcctgatgcggatgtagccggcctcgccccagctgtcgctccacgagtt 214
Query: 417 cttcacgatccagtagtccttgccgctctcgctgccgtagcccaccgccgtgacgccgtg 476
|||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 213 cttcacgatccagtaggccttgccgttctcgctgccgtagcccaccaccgtgacgccgtg 154
Query: 477 gtccaggctcgtcccgcatggcccgttgaagatgcccgaactgtagtgctggaacgcacg 536
||||||| |||||||||| |||||||||||||||||||| |||||||| |||||||||||
Sbjct: 153 gtccaggttcgtcccgcacggcccgttgaagatgcccgagctgtagtgttggaacgcacg 94
Query: 537 cccgcctgcgtcgatggcgacactgacgggctggatcgccaccgcctcctgcagcgccgt 596
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 93 tccgccggcgtcgatggcgacgctgacgggctggatcgccaccgcctcctgcagcgccgt 34
Query: 597 ctcgttgttgctcgccacctccaccaacccatc 629
|||||||||||||||||||||||| ||||||||
Sbjct: 33 ctcgttgttgctcgccacctccacgaacccatc 1
Score = 50.1 bits (25), Expect = 6e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 231 ctaagcaagaaccatcttgatcacatccatggc 263
||||||||| |||||||||| ||||||||||||
Sbjct: 381 ctaagcaaggaccatcttgagcacatccatggc 349
>gb|CD220118.1|CD220118 CCC1_65_G03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_65_G03_A007 3', mRNA sequence
Length = 641
Score = 466 bits (235), Expect = e-129
Identities = 307/331 (92%)
Strand = Plus / Minus
Query: 297 gtaggtgtccttcacagggtaggacgcgtccatggcgatgccgcacttgcccgtgggccg 356
||||||||||||||| ||||| |||||||||||||||||||| ||||| ||| ||||
Sbjct: 331 gtaggtgtccttcaccgggtacgacgcgtccatggcgatgccacactttcccacgggcaa 272
Query: 357 gggcacgttgcgcctcatgcggatgtagccggcctcgccccagctggcgctccacgagtt 416
|||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 271 aaacacgttgcgcctgatgcggatgtagccggcctcgccccagctgtcgctccacgagtt 212
Query: 417 cttcacgatccagtagtccttgccgctctcgctgccgtagcccaccgccgtgacgccgtg 476
|||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 211 cttcacgatccagtaggccttgccgttctcgctgccgtagcccaccaccgtgacgccgtg 152
Query: 477 gtccaggctcgtcccgcatggcccgttgaagatgcccgaactgtagtgctggaacgcacg 536
||||||| |||||||||| |||||||||||||||||||| |||||||| |||||||||||
Sbjct: 151 gtccaggttcgtcccgcacggcccgttgaagatgcccgagctgtagtgttggaacgcacg 92
Query: 537 cccgcctgcgtcgatggcgacactgacgggctggatcgccaccgcctcctgcagcgccgt 596
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 91 tccgccggcgtcgatggcgacgctgacgggctggatcgccaccgcctcctgcagcgccgt 32
Query: 597 ctcgttgttgctcgccacctccaccaaccca 627
|||||||||||||||||||||||| ||||||
Sbjct: 31 ctcgttgttgctcgccacctccacgaaccca 1
Score = 50.1 bits (25), Expect = 6e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 231 ctaagcaagaaccatcttgatcacatccatggc 263
||||||||| |||||||||| ||||||||||||
Sbjct: 379 ctaagcaaggaccatcttgagcacatccatggc 347
>gb|CW145901.1|CW145901 104_538_11138707_148_34980_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11138707, DNA
sequence
Length = 586
Score = 331 bits (167), Expect = 1e-088
Identities = 218/235 (92%)
Strand = Plus / Plus
Query: 656 ccttgctggcgtcacaagtgccgtcggttccgatgaaggggtagtcggcctcggtgtcga 715
||||| |||| ||||| |||||||| ||| ||||||||||||||||||| ||| ||||||
Sbjct: 61 ccttgttggcatcacaggtgccgtcagttgcgatgaaggggtagtcggcttcgctgtcga 120
Query: 716 tcccgccgttgccgatgacgaaccggaacgcgttctccatctgcccgccgtcgcagccgc 775
||||||||||| ||||||||||| |||| |||||||||||||||||||||| ||||||||
Sbjct: 121 tcccgccgttgtcgatgacgaactggaaggcgttctccatctgcccgccgttgcagccgc 180
Query: 776 tgtcctgggcgtcgcagtcgatgatctcctgctccgacagcgacaccaggttacccgtcg 835
||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 181 tgtcctgggtgtcgcagtcgatgatctcctgctccgacagcgacacgaggttgcccgtca 240
Query: 836 cgatcgcgttcaccccctcgatggccgccaccgccgagaacgcccagcacccacc 890
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgatcgcgttgatcccctcgatggccgccaccgccgagaacgcccagcacccacc 295
Score = 101 bits (51), Expect = 2e-019
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 888 accgcactgttgctggtccttgacctcggtgacggcgccaagctggcgccagtcgatggc 947
|||||| |||| |||| ||| || |||||||||||||||||||||||||||||||||||
Sbjct: 402 accgcattgttcttggttcttcacgtcggtgacggcgccaagctggcgccagtcgatggc 461
Query: 948 gtcggggaggtcgccgccgcgg 969
||| ||||||||||||| ||||
Sbjct: 462 gtcngggaggtcgccgcagcgg 483
>gb|CW250598.1|CW250598 104_712_11223479_116_35050_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11223479, DNA
sequence
Length = 594
Score = 331 bits (167), Expect = 1e-088
Identities = 218/235 (92%)
Strand = Plus / Plus
Query: 656 ccttgctggcgtcacaagtgccgtcggttccgatgaaggggtagtcggcctcggtgtcga 715
||||| |||| ||||| |||||||| ||| ||||||||||||||||||| ||| ||||||
Sbjct: 93 ccttgttggcatcacaggtgccgtcagttgcgatgaaggggtagtcggcttcgctgtcga 152
Query: 716 tcccgccgttgccgatgacgaaccggaacgcgttctccatctgcccgccgtcgcagccgc 775
||||||||||| ||||||||||| |||| |||||||||||||||||||||| ||||||||
Sbjct: 153 tcccgccgttgtcgatgacgaactggaaggcgttctccatctgcccgccgttgcagccgc 212
Query: 776 tgtcctgggcgtcgcagtcgatgatctcctgctccgacagcgacaccaggttacccgtcg 835
||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 213 tgtcctgggtgtcgcagtcgatgatctcctgctccgacagcgacacgaggttgcccgtca 272
Query: 836 cgatcgcgttcaccccctcgatggccgccaccgccgagaacgcccagcacccacc 890
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cgatcgcgttgatcccctcgatggccgccaccgccgagaacgcccagcacccacc 327
Score = 107 bits (54), Expect = 3e-021
Identities = 75/82 (91%)
Strand = Plus / Plus
Query: 888 accgcactgttgctggtccttgacctcggtgacggcgccaagctggcgccagtcgatggc 947
|||||| |||| |||| ||| || |||||||||||||||||||||||||||||||||||
Sbjct: 434 accgcattgttcttggttcttcacgtcggtgacggcgccaagctggcgccagtcgatggc 493
Query: 948 gtcggggaggtcgccgccgcgg 969
||||||||||||||||| ||||
Sbjct: 494 gtcggggaggtcgccgcagcgg 515
>gb|CW023657.1|CW023657 104_163_10432571_5_30009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10432571, DNA
sequence
Length = 642
Score = 287 bits (145), Expect = 1e-075
Identities = 199/217 (91%)
Strand = Plus / Plus
Query: 297 gtaggtgtccttcacagggtaggacgcgtccatggcgatgccgcacttgcccgtgggccg 356
||||||||||||||| ||||| |||||||||||||||||||| ||||| ||| ||||
Sbjct: 309 gtaggtgtccttcaccgggtacgacgcgtccatggcgatgccacactttcccacgggcaa 368
Query: 357 gggcacgttgcgcctcatgcggatgtagccggcctcgccccagctggcgctccacgagtt 416
|||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 369 aaacacgttgcgcctgatgcggatgtagccggcctcgccccagctgtcgctccacgagtt 428
Query: 417 cttcacgatccagtagtccttgccgctctcgctgccgtagcccaccgccgtgacgccgtg 476
|||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 429 cttcacgatccagtaggccttgccgttctcgctgccgtagcccaccaccgtgacgccgtg 488
Query: 477 gtccaggctcgtcccgcatggcccgttgaagatgccc 513
||||||| |||||||||| ||||||||||||||||||
Sbjct: 489 gtccaggttcgtcccgcacggcccgttgaagatgccc 525
Score = 50.1 bits (25), Expect = 6e-004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 231 ctaagcaagaaccatcttgatcacatccatggc 263
||||||||| |||||||||| ||||||||||||
Sbjct: 261 ctaagcaaggaccatcttgagcacatccatggc 293
>gb|CW145900.1|CW145900 104_538_11138707_116_34976_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11138707, DNA
sequence
Length = 606
Score = 262 bits (132), Expect = 8e-068
Identities = 153/160 (95%)
Strand = Plus / Minus
Query: 1011 gcgggcgcgaaagccgaggacgcggccacggtactcctccagggtgaggtcggcgaaggg 1070
||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 570 gcgggcgcgaaagccgagggcgcggccgcggtactcctcgagggtgaggtcggcgaaggg 511
Query: 1071 ggtgaggccgaggcggaaggtgtggagcccagcgtccgcctccgcgttgtgcgcgtcgat 1130
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 510 ggtgaggccgaggcggaaggtgtgcagcccggcgtccgcctccgcgttgtgcgcgtcgat 451
Query: 1131 gtaccgaaggttgtcgcggaacacctccagccgcagccgg 1170
|||||| |||||||||||||||||||| ||||||||||||
Sbjct: 450 gtaccgcaggttgtcgcggaacacctcaagccgcagccgg 411
Score = 155 bits (78), Expect = 1e-035
Identities = 116/129 (89%), Gaps = 6/129 (4%)
Strand = Plus / Minus
Query: 1240 ccgtgcttcgacttccacgcctcgtacatgcgccgcacctcctcgtccgcccgctccgct 1299
|||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 371 ccgtgcttggacttccacgcctcgtacatacgccgcacctcctcgtccgcccgctccgcc 312
Query: 1300 ggcgccgggacgcgggtggtggtggtggtgtaggagtggcgggccgccgccgtggcggcc 1359
|||||||| || | |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 311 ggcgccggaac------gatggtggtggtgtaggagtggcgggccaccgccgtggtggcc 258
Query: 1360 agtgccagt 1368
|||||||||
Sbjct: 257 agtgccagt 249
>gb|CW094183.1|CW094183 104_457_11000174_116_37476_053 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11000174, DNA
sequence
Length = 441
Score = 254 bits (128), Expect = 2e-065
Identities = 152/160 (95%)
Strand = Plus / Plus
Query: 1011 gcgggcgcgaaagccgaggacgcggccacggtactcctccagggtgaggtcggcgaaggg 1070
||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 170 gcgggcgcggaagccgagggcgcggccgcggtactcctcgagggtgaggtcggcgaaggg 229
Query: 1071 ggtgaggccgaggcggaaggtgtggagcccagcgtccgcctccgcgttgtgcgcgtcgat 1130
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 230 ggtgaggccgaggcggaaggtgtgcagcccggcgtccgcctccgcgttgtgcgcgtcgat 289
Query: 1131 gtaccgaaggttgtcgcggaacacctccagccgcagccgg 1170
|||||| ||||||||||||||||||||||| |||||||||
Sbjct: 290 gtaccgcaggttgtcgcggaacacctccagacgcagccgg 329
Score = 117 bits (59), Expect = 3e-024
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 887 caccgcactgttgctggtccttgacctcggtgacggcgccaagctggcgccagtcgatgg 946
||||||| |||| |||| ||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 37 caccgcattgttcttggttcttgaccccggtgacggcgccaagctcgcgccagtcgatgg 96
Query: 947 cgtcggggaggtcgccgccgcgg 969
|||||||||||||||||||||||
Sbjct: 97 cgtcggggaggtcgccgccgcgg 119
Score = 87.7 bits (44), Expect = 3e-015
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 1240 ccgtgcttcgacttccacgcctcgtacatgcgccgcacctcctcgtccgcccgctccgct 1299
||||||| |||||||||||||||| |||| ||||||||||| ||||||||||||||| |
Sbjct: 351 ccgtgctccgacttccacgcctcggacatacgccgcacctcgtcgtccgcccgctccacg 410
Query: 1300 ggcgccgg 1307
||||||||
Sbjct: 411 ggcgccgg 418
>gb|CW250599.1|CW250599 104_712_11223479_148_35054_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11223479, DNA
sequence
Length = 644
Score = 254 bits (128), Expect = 2e-065
Identities = 152/160 (95%)
Strand = Plus / Minus
Query: 1011 gcgggcgcgaaagccgaggacgcggccacggtactcctccagggtgaggtcggcgaaggg 1070
||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 532 gcgggcgcggaagccgagggcgcggccgcggtactcctcgagggtgaggtcggcgaaggg 473
Query: 1071 ggtgaggccgaggcggaaggtgtggagcccagcgtccgcctccgcgttgtgcgcgtcgat 1130
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 472 ggtgaggccgaggcggaaggtgtgcagcccggcgtccgcctccgcgttgtgcgcgtcgat 413
Query: 1131 gtaccgaaggttgtcgcggaacacctccagccgcagccgg 1170
|||||| |||||||||||||||||||| ||||||||||||
Sbjct: 412 gtaccgcaggttgtcgcggaacacctcaagccgcagccgg 373
Score = 155 bits (78), Expect = 1e-035
Identities = 116/129 (89%), Gaps = 6/129 (4%)
Strand = Plus / Minus
Query: 1240 ccgtgcttcgacttccacgcctcgtacatgcgccgcacctcctcgtccgcccgctccgct 1299
|||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 333 ccgtgcttggacttccacgcctcgtacatacgccgcacctcctcgtccgcccgctccgcc 274
Query: 1300 ggcgccgggacgcgggtggtggtggtggtgtaggagtggcgggccgccgccgtggcggcc 1359
|||||||| || | |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 273 ggcgccggaac------gatggtggtggtgtaggagtggcgggccaccgccgtggtggcc 220
Query: 1360 agtgccagt 1368
|||||||||
Sbjct: 219 agtgccagt 211
>gb|CW479674.1|CW479674 fsbb001f238f03f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f238f03, DNA
sequence
Length = 427
Score = 254 bits (128), Expect = 2e-065
Identities = 152/160 (95%)
Strand = Plus / Plus
Query: 1011 gcgggcgcgaaagccgaggacgcggccacggtactcctccagggtgaggtcggcgaaggg 1070
||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 168 gcgggcgcggaagccgagggcgcggccgcggtactcctcgagggtgaggtcggcgaaggg 227
Query: 1071 ggtgaggccgaggcggaaggtgtggagcccagcgtccgcctccgcgttgtgcgcgtcgat 1130
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 228 ggtgaggccgaggcggaaggtgtgcagcccggcgtccgcctccgcgttgtgcgcgtcgat 287
Query: 1131 gtaccgaaggttgtcgcggaacacctccagccgcagccgg 1170
|||||| ||||||||||||||||||||||| |||||||||
Sbjct: 288 gtaccgcaggttgtcgcggaacacctccagacgcagccgg 327
Score = 117 bits (59), Expect = 3e-024
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 887 caccgcactgttgctggtccttgacctcggtgacggcgccaagctggcgccagtcgatgg 946
||||||| |||| |||| ||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 35 caccgcattgttcttggttcttgaccccggtgacggcgccaagctcgcgccagtcgatgg 94
Query: 947 cgtcggggaggtcgccgccgcgg 969
|||||||||||||||||||||||
Sbjct: 95 cgtcggggaggtcgccgccgcgg 117
Score = 95.6 bits (48), Expect = 1e-017
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 1240 ccgtgcttcgacttccacgcctcgtacatgcgccgcacctcctcgtccgcccgctccgct 1299
||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| |
Sbjct: 349 ccgtgctccgacttccacgcctcgtacatacgccgcacctcgtcgtccgcccgctccacg 408
Query: 1300 ggcgccgg 1307
||||||||
Sbjct: 409 ggcgccgg 416
>gb|CD220219.1|CD220219 CCC1_65_G03.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_65_G03_A007 5', mRNA sequence
Length = 624
Score = 254 bits (128), Expect = 2e-065
Identities = 152/160 (95%)
Strand = Plus / Minus
Query: 1011 gcgggcgcgaaagccgaggacgcggccacggtactcctccagggtgaggtcggcgaaggg 1070
||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 473 gcgggcgcggaagccgagggcgcggccgcggtactcctcgagggtgaggtcggcgaaggg 414
Query: 1071 ggtgaggccgaggcggaaggtgtggagcccagcgtccgcctccgcgttgtgcgcgtcgat 1130
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 413 ggtgaggccgaggcggaaggtgtgcagcccggcgtccgcctccgcgttgtgcgcgtcgat 354
Query: 1131 gtaccgaaggttgtcgcggaacacctccagccgcagccgg 1170
|||||| |||||||||||||||||||| ||||||||||||
Sbjct: 353 gtaccgcaggttgtcgcggaacacctcaagccgcagccgg 314
Score = 155 bits (78), Expect = 1e-035
Identities = 116/129 (89%), Gaps = 6/129 (4%)
Strand = Plus / Minus
Query: 1240 ccgtgcttcgacttccacgcctcgtacatgcgccgcacctcctcgtccgcccgctccgct 1299
|||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 274 ccgtgcttggacttccacgcctcgtacatacgccgcacctcctcgtccgcccgctccgcc 215
Query: 1300 ggcgccgggacgcgggtggtggtggtggtgtaggagtggcgggccgccgccgtggcggcc 1359
|||||||| || | |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 214 ggcgccggaac------gatggtggtggtgtaggagtggcgggccaccgccgtggtggcc 161
Query: 1360 agtgccagt 1368
|||||||||
Sbjct: 160 agtgccagt 152
Score = 105 bits (53), Expect = 1e-020
Identities = 56/57 (98%)
Strand = Plus / Minus
Query: 913 tcggtgacggcgccaagctggcgccagtcgatggcgtcggggaggtcgccgccgcgg 969
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 619 tcggtgacggcgccaagctggcgccagtcgatggcgtcggggaggtcgccgcagcgg 563
>gb|CD222181.1|CD222181 CCC1_2_A08.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_2_A08_A007 5', mRNA sequence
Length = 650
Score = 254 bits (128), Expect = 2e-065
Identities = 152/160 (95%)
Strand = Plus / Minus
Query: 1011 gcgggcgcgaaagccgaggacgcggccacggtactcctccagggtgaggtcggcgaaggg 1070
||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 473 gcgggcgcggaagccgagggcgcggccgcggtactcctcgagggtgaggtcggcgaaggg 414
Query: 1071 ggtgaggccgaggcggaaggtgtggagcccagcgtccgcctccgcgttgtgcgcgtcgat 1130
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 413 ggtgaggccgaggcggaaggtgtgcagcccggcgtccgcctccgcgttgtgcgcgtcgat 354
Query: 1131 gtaccgaaggttgtcgcggaacacctccagccgcagccgg 1170
|||||| |||||||||||||||||||| ||||||||||||
Sbjct: 353 gtaccgcaggttgtcgcggaacacctcaagccgcagccgg 314
Score = 155 bits (78), Expect = 1e-035
Identities = 116/129 (89%), Gaps = 6/129 (4%)
Strand = Plus / Minus
Query: 1240 ccgtgcttcgacttccacgcctcgtacatgcgccgcacctcctcgtccgcccgctccgct 1299
|||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 274 ccgtgcttggacttccacgcctcgtacatacgccgcacctcctcgtccgcccgctccgcc 215
Query: 1300 ggcgccgggacgcgggtggtggtggtggtgtaggagtggcgggccgccgccgtggcggcc 1359
|||||||| || | |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 214 ggcgccggaac------gatggtggtggtgtaggagtggcgggccaccgccgtggtggcc 161
Query: 1360 agtgccagt 1368
|||||||||
Sbjct: 160 agtgccagt 152
Score = 119 bits (60), Expect = 8e-025
Identities = 81/88 (92%)
Strand = Plus / Minus
Query: 882 gcacccaccgcactgttgctggtccttgacctcggtgacggcgccaagctggcgccagtc 941
|||||||||||| |||| |||| ||| || |||||||||||||||||||||||||||||
Sbjct: 650 gcacccaccgcattgttcttggttcttcacgtcggtgacggcgccaagctggcgccagtc 591
Query: 942 gatggcgtcggggaggtcgccgccgcgg 969
||||||||||||||||||||||| ||||
Sbjct: 590 gatggcgtcggggaggtcgccgcagcgg 563
>gb|CW023656.1|CW023656 104_163_10432571_1_30001 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10432571, DNA
sequence
Length = 604
Score = 232 bits (117), Expect = 7e-059
Identities = 135/141 (95%)
Strand = Plus / Minus
Query: 373 atgcggatgtagccggcctcgccccagctggcgctccacgagttcttcacgatccagtag 432
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 579 atgcggatgtagccggcctcgccccagctgtcgctccacgagttcttcacgatccagtag 520
Query: 433 tccttgccgctctcgctgccgtagcccaccgccgtgacgccgtggtccaggctcgtcccg 492
|||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 519 gccttgccgttctcgctgccgtagcccaccaccgtgacgccgtggtccaggttcgtcccg 460
Query: 493 catggcccgttgaagatgccc 513
|| ||||||||||||||||||
Sbjct: 459 cacggcccgttgaagatgccc 439
Score = 208 bits (105), Expect = 1e-051
Identities = 126/133 (94%)
Strand = Plus / Minus
Query: 512 ccgaactgtagtgctggaacgcacgcccgcctgcgtcgatggcgacactgacgggctgga 571
|||| |||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||
Sbjct: 312 ccgagctgtagtgttggaacgcacgtccgccggcgtcgatggcgacgctgacgggctgga 253
Query: 572 tcgccaccgcctcctgcagcgccgtctcgttgttgctcgccacctccaccaacccatcta 631
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 252 tcgccaccgcctcctgcagcgccgtctcgttgttgctcgccacctccacgaacccatcta 193
Query: 632 tggtggcgacctt 644
||| |||||||||
Sbjct: 192 tggcggcgacctt 180
>gb|CW119932.1|CW119932 104_497_11109041_148_34644_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11109041, DNA
sequence
Length = 523
Score = 230 bits (116), Expect = 3e-058
Identities = 137/144 (95%)
Strand = Plus / Plus
Query: 1011 gcgggcgcgaaagccgaggacgcggccacggtactcctccagggtgaggtcggcgaaggg 1070
||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 380 gcgggcgcggaagccgagggcgcggccgcggtactcctcgagggtgaggtcggcgaaggg 439
Query: 1071 ggtgaggccgaggcggaaggtgtggagcccagcgtccgcctccgcgttgtgcgcgtcgat 1130
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 440 ggtgaggccgaggcggaaggtgtgcagcccggcgtccgcctccgcgttgtgcgcgtcgat 499
Query: 1131 gtaccgaaggttgtcgcggaacac 1154
|||||| |||||||||||||||||
Sbjct: 500 gtaccgcaggttgtcgcggaacac 523
Score = 163 bits (82), Expect = 6e-038
Identities = 97/102 (95%)
Strand = Plus / Plus
Query: 789 gcagtcgatgatctcctgctccgacagcgacaccaggttacccgtcgcgatcgcgttcac 848
||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||| |
Sbjct: 1 gcagtcgatgatctcctgctccgacagcgacacgaggttgcccgtcacgatcgcgttgat 60
Query: 849 cccctcgatggccgccaccgccgagaacgcccagcacccacc 890
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccctcgatggccgccaccgccgagaacgcccagcacccacc 102
Score = 107 bits (54), Expect = 3e-021
Identities = 75/82 (91%)
Strand = Plus / Plus
Query: 888 accgcactgttgctggtccttgacctcggtgacggcgccaagctggcgccagtcgatggc 947
|||||| |||| |||| ||| || |||||||||||||||||||||||||||||||||||
Sbjct: 209 accgcattgttcttggttcttcacgtcggtgacggcgccaagctggcgccagtcgatggc 268
Query: 948 gtcggggaggtcgccgccgcgg 969
||||||||||||||||| ||||
Sbjct: 269 gtcggggaggtcgccgcagcgg 290
>gb|CW071641.1|CW071641 104_323_10591612_116_30545 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10591612, DNA
sequence
Length = 639
Score = 222 bits (112), Expect = 7e-056
Identities = 127/132 (96%)
Strand = Plus / Plus
Query: 1039 cggtactcctccagggtgaggtcggcgaagggggtgaggccgaggcggaaggtgtggagc 1098
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2 cggtactcctcgagggtgaggtcggcgaagggggtgaggccgaggcggaaggtgtgcagc 61
Query: 1099 ccagcgtccgcctccgcgttgtgcgcgtcgatgtaccgaaggttgtcgcggaacacctcc 1158
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 62 ccggcgtccgcctccgcgttgtgcgcgtcgatgtaccgcaggttgtcgcggaacacctcc 121
Query: 1159 agccgcagccgg 1170
|| |||||||||
Sbjct: 122 agacgcagccgg 133
Score = 95.6 bits (48), Expect = 1e-017
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 1240 ccgtgcttcgacttccacgcctcgtacatgcgccgcacctcctcgtccgcccgctccgct 1299
||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| |
Sbjct: 155 ccgtgctccgacttccacgcctcgtacatacgccgcacctcgtcgtccgcccgctccacg 214
Query: 1300 ggcgccgg 1307
||||||||
Sbjct: 215 ggcgccgg 222
>gb|CW117585.1|CW117585 104_493_11107734_148_34611_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11107734, DNA
sequence
Length = 469
Score = 208 bits (105), Expect = 1e-051
Identities = 126/133 (94%)
Strand = Plus / Plus
Query: 512 ccgaactgtagtgctggaacgcacgcccgcctgcgtcgatggcgacactgacgggctgga 571
|||| |||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||
Sbjct: 59 ccgagctgtagtgttggaacgcacgtccgccggcgtcgatggcgacgctgacgggctgga 118
Query: 572 tcgccaccgcctcctgcagcgccgtctcgttgttgctcgccacctccaccaacccatcta 631
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 119 tcgccaccgcctcctgcagcgccgtctcgttgttgctcgccacctccacgaacccatcta 178
Query: 632 tggtggcgacctt 644
||| |||||||||
Sbjct: 179 tggcggcgacctt 191
Score = 151 bits (76), Expect = 2e-034
Identities = 116/128 (90%), Gaps = 1/128 (0%)
Strand = Plus / Plus
Query: 656 ccttgctggcgtcacaagtgccgtcggttccgatgaaggggtagtcggcctcggtgtcga 715
||||| |||| ||||| |||||||| ||| ||||||||||||||||||| ||| ||||||
Sbjct: 343 ccttgttggcatcacaggtgccgtcagttgcgatgaaggggtagtcggcttcgctgtcga 402
Query: 716 tcccgccgttgccgatgacgaaccggaacgcgttctccatctgcccgccgtcgcagccgc 775
||||||||||| ||||||||||| || | |||||||||||||||||||||| ||||||||
Sbjct: 403 tcccgccgttgtcgatgacgaactgg-aggcgttctccatctgcccgccgttgcagccgc 461
Query: 776 tgtcctgg 783
||||||||
Sbjct: 462 tgtcctgg 469
>gb|BZ365982.1|BZ365982 ic93g12.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic93g12 5', DNA sequence
Length = 741
Score = 200 bits (101), Expect = 3e-049
Identities = 122/129 (94%)
Strand = Plus / Minus
Query: 1043 actcctccagggtgaggtcggcgaagggggtgaggccgaggcggaaggtgtggagcccag 1102
|||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 493 actcgtccatggtgaggtcggcgaagggggtgaggccgaggcggaaggtgtgcagcccgg 434
Query: 1103 cgtccgcctccgcgttgtgcgcgtcgatgtaccgaaggttgtcgcggaacacctccagcc 1162
||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 433 cgtccgcctccgcgttgtgcgcgtcgatgtaccccaggttgtcacggaacacctccagcc 374
Query: 1163 gcagccggc 1171
|||||||||
Sbjct: 373 gcagccggc 365
Score = 79.8 bits (40), Expect = 7e-013
Identities = 55/59 (93%), Gaps = 2/59 (3%)
Strand = Plus / Minus
Query: 1240 ccgtgcttcgacttccacgcctcgtacatgcgccgcacctc--ctcgtccgcccgctcc 1296
||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 332 ccgtgcttcgacttccacgcctcgtacatacgccgcacctcgtgtcgtccgcccgctcc 274
Score = 73.8 bits (37), Expect = 4e-011
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 899 gctggtccttgacctcggtgacggcgccaagctggcgccagtcgatggcgtcggggaggt 958
|||||| || |||| ||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 636 gctggttctggaccccggtgacggcgccctgctggcgccagtcgacggcgtcggggaggt 577
Query: 959 c 959
|
Sbjct: 576 c 576
>gb|CW322872.1|CW322872 104_816_11476333_148_35949_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476333, DNA
sequence
Length = 656
Score = 200 bits (101), Expect = 3e-049
Identities = 131/141 (92%)
Strand = Plus / Minus
Query: 373 atgcggatgtagccggcctcgccccagctggcgctccacgagttcttcacgatccagtag 432
|||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||
Sbjct: 655 atgcggatgtagccggcctcaccccagctgctgctccacgaattcttcacgatccagtag 596
Query: 433 tccttgccgctctcgctgccgtagcccaccgccgtgacgccgtggtccaggctcgtcccg 492
||||||||| ||||||||||||||||||||||||||||||| ||||| || |||||||
Sbjct: 595 tccttgccgttctcgctgccgtagcccaccgccgtgacgccatggtctagctgcgtcccg 536
Query: 493 catggcccgttgaagatgccc 513
|||||||||||||||||||||
Sbjct: 535 catggcccgttgaagatgccc 515
Score = 75.8 bits (38), Expect = 1e-011
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 518 tgtagtgctggaacgcacgcccgcctgcgtcgatggcgacactgacgggctggatcgcca 577
||||||||||||| ||| |||| ||||||||| |||||||| || |||||| ||||||
Sbjct: 362 tgtagtgctggaatttacgtccgcttgcgtcgattgcgacactcacaggctggttcgcca 303
Query: 578 ccgcctcctgcagcgccgtctc 599
|||||||||||| ||| |||||
Sbjct: 302 ccgcctcctgcaacgctgtctc 281
>gb|CW058583.1|CW058583 104_301_10518818_114_30158 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518818, DNA
sequence
Length = 667
Score = 186 bits (94), Expect = 4e-045
Identities = 109/114 (95%)
Strand = Plus / Minus
Query: 1043 actcctccagggtgaggtcggcgaagggggtgaggccgaggcggaaggtgtggagcccag 1102
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 150 actcctccagggtgaggtcggtgaagggggtgaggccgaggcggaaggtgtggagcccgg 91
Query: 1103 cgtccgcctccgcgttgtgcgcgtcgatgtaccgaaggttgtcgcggaacacct 1156
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||
Sbjct: 90 cgtccgcctccgcgttgtgggcgtcgatgtaccgcaggttgtctcggaacacct 37
Score = 137 bits (69), Expect = 3e-030
Identities = 174/209 (83%)
Strand = Plus / Minus
Query: 682 gttccgatgaaggggtagtcggcctcggtgtcgatcccgccgttgccgatgacgaaccgg 741
||||||||||||||||||||| |||||||||| || ||||||||| |||| |||||| ||
Sbjct: 623 gttccgatgaaggggtagtcgccctcggtgtcaatgccgccgttgtcgatcacgaactgg 564
Query: 742 aacgcgttctccatctgcccgccgtcgcagccgctgtcctgggcgtcgcagtcgatgatc 801
|| || |||| ||||| || || | ||||||| ||||| | ||||||||| || | |
Sbjct: 563 aaagctttctgcatctctccaccctggcagccgtagtcctcagtgtcgcagtcaatcagc 504
Query: 802 tcctgctccgacagcgacaccaggttacccgtcgcgatcgcgttcaccccctcgatggcc 861
||||||||||||||||| | ||||| |||| ||||| ||| | |||||| |||||
Sbjct: 503 tcctgctccgacagcgatatgaggttgttcgtcacgatcttgttgatcccctccatggct 444
Query: 862 gccaccgccgagaacgcccagcacccacc 890
|||||||||||||||||||||||||||||
Sbjct: 443 gccaccgccgagaacgcccagcacccacc 415
Score = 81.8 bits (41), Expect = 2e-013
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 899 gctggtccttgacctcggtgacggcgccaagctggcgccagtcgatggcgtcggggaggt 958
|||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 291 gctggttcttgaccccggtgacggcgccctgctggcgccagtcgacggcgtcggggaggt 232
Query: 959 c 959
|
Sbjct: 231 c 231
>gb|CW216616.1|CW216616 104_649_11195211_148_37126_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195211, DNA
sequence
Length = 335
Score = 178 bits (90), Expect = 1e-042
Identities = 114/122 (93%)
Strand = Plus / Plus
Query: 1024 ccgaggacgcggccacggtactcctccagggtgaggtcggcgaagggggtgaggccgagg 1083
|||||| ||||||| ||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 214 ccgagggcgcggccgcggtactcctcgagggtgaggtcggcgaagggggtgaggacgagg 273
Query: 1084 cggaaggtgtggagcccagcgtccgcctccgcgttgtgcgcgtcgatgtaccgaaggttg 1143
||||||||||| ||||| ||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 274 cggaaggtgtgcagcccggcgtccgcctccgcgttgtgcgcgtcgatgtaccgtatgttg 333
Query: 1144 tc 1145
||
Sbjct: 334 tc 335
Score = 117 bits (59), Expect = 3e-024
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 887 caccgcactgttgctggtccttgacctcggtgacggcgccaagctggcgccagtcgatgg 946
||||||| |||| |||| ||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 68 caccgcattgttcttggttcttgaccccggtgacggcgccaagctcgcgccagtcgatgg 127
Query: 947 cgtcggggaggtcgccgccgcgg 969
|||||||||||||||||||||||
Sbjct: 128 cgtcggggaggtcgccgccgcgg 150
>gb|CW494483.1|CW494483 fsbb001f285m17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f285m17, DNA
sequence
Length = 523
Score = 157 bits (79), Expect = 4e-036
Identities = 133/151 (88%)
Strand = Plus / Plus
Query: 740 ggaacgcgttctccatctgcccgccgtcgcagccgctgtcctgggcgtcgcagtcgatga 799
|||| ||||| | ||||| |||||||| |||||||| |||||||| ||||||||| ||||
Sbjct: 3 ggaaagcgttttgcatctccccgccgttgcagccgccgtcctgggtgtcgcagtcaatga 62
Query: 800 tctcctgctccgacagcgacaccaggttacccgtcgcgatcgcgttcaccccctcgatgg 859
|||||||||||||||||||||| ||||| || ||| ||||| |||| | |||||||||||
Sbjct: 63 tctcctgctccgacagcgacacgaggttgcctgtcacgatctcgttgatcccctcgatgg 122
Query: 860 ccgccaccgccgagaacgcccagcacccacc 890
| ||||| ||||||||||||||||| |||||
Sbjct: 123 ctgccactgccgagaacgcccagcatccacc 153
Score = 117 bits (59), Expect = 3e-024
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 887 caccgcactgttgctggtccttgacctcggtgacggcgccaagctggcgccagtcgatgg 946
||||||| |||| |||| ||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 332 caccgcattgttcttggttcttgaccccggtgacggcgccaagctcgcgccagtcgatgg 391
Query: 947 cgtcggggaggtcgccgccgcgg 969
|||||||||||||||||||||||
Sbjct: 392 cgtcggggaggtcgccgccgcgg 414
Score = 69.9 bits (35), Expect = 6e-010
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 1011 gcgggcgcgaaagccgaggacgcggccacggtactcctccagggtgaggtc 1061
||||||||| ||||||||| ||||||| ||||||||||| |||||||||||
Sbjct: 465 gcgggcgcggaagccgagggcgcggccgcggtactcctcgagggtgaggtc 515
>gb|CW295801.1|CW295801 104_777_11461144_148_35627_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11461144, DNA
sequence
Length = 602
Score = 149 bits (75), Expect = 9e-034
Identities = 135/155 (87%)
Strand = Plus / Plus
Query: 359 gcacgttgcgcctcatgcggatgtagccggcctcgccccagctggcgctccacgagttct 418
||||||||||| |||||||||||||||| | ||| ||||| ||||| |||||||||||
Sbjct: 5 gcacgttgcgcttcatgcggatgtagccagactctccccactcggcgccccacgagttct 64
Query: 419 tcacgatccagtagtccttgccgctctcgctgccgtagcccaccgccgtgacgccgtggt 478
| ||||||||| |||||| |||| | ||||||||||||||||||||||| ||||||||||
Sbjct: 65 tgacgatccagaagtcctcgccgttgtcgctgccgtagcccaccgccgtcacgccgtggt 124
Query: 479 ccaggctcgtcccgcatggcccgttgaagatgccc 513
|||| | |||||| ||||||||||||||||||
Sbjct: 125 ccagtatgaacccgcacggcccgttgaagatgccc 159
Score = 69.9 bits (35), Expect = 6e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 512 ccgaactgtagtgctggaacgcacgcccgcctgcgtcgatggcgacactgacgggctgga 571
|||| |||||||| ||||||||| | | || | ||| |||||||||||||| ||||||
Sbjct: 342 ccgagctgtagtgttggaacgcaggactgctcgagtcaatggcgacactgaccggctggt 401
Query: 572 tcgccaccgcctcctgcagcgcc 594
|||||||||||| ||||||||||
Sbjct: 402 tcgccaccgccttctgcagcgcc 424
>gb|CW117584.1|CW117584 104_493_11107734_116_34615_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11107734, DNA
sequence
Length = 499
Score = 147 bits (74), Expect = 3e-033
Identities = 115/129 (89%), Gaps = 6/129 (4%)
Strand = Plus / Minus
Query: 1240 ccgtgcttcgacttccacgcctcgtacatgcgccgcacctcctcgtccgcccgctccgct 1299
|||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 418 ccgtgcttggacttccacgcctcgtacatacgccgcacctccttgtccgcccgctccgcc 359
Query: 1300 ggcgccgggacgcgggtggtggtggtggtgtaggagtggcgggccgccgccgtggcggcc 1359
|||||||| || | |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 358 ggcgccggaac------gatggtggtggtgtaggagtggcgggccaccgccgtggtggcc 305
Query: 1360 agtgccagt 1368
|||||||||
Sbjct: 304 agtgccagt 296
Score = 67.9 bits (34), Expect = 3e-009
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 1129 atgtaccgaaggttgtcgcggaacacctccagccgcagccgg 1170
|||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 499 atgtaccgcaggttgtcgcggaacacctcaagccgcagccgg 458
>gb|CW058584.1|CW058584 104_301_10518818_115_30164 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518818, DNA
sequence
Length = 592
Score = 145 bits (73), Expect = 1e-032
Identities = 175/209 (83%)
Strand = Plus / Plus
Query: 682 gttccgatgaaggggtagtcggcctcggtgtcgatcccgccgttgccgatgacgaaccgg 741
|||||||||||||||||||||||||||||||| || ||||||||| |||| |||||| ||
Sbjct: 203 gttccgatgaaggggtagtcggcctcggtgtcaatgccgccgttgtcgatcacgaactgg 262
Query: 742 aacgcgttctccatctgcccgccgtcgcagccgctgtcctgggcgtcgcagtcgatgatc 801
|| || |||| ||||| || || | ||||||| ||||| | ||||||||| || | |
Sbjct: 263 aaagctttctgcatctctccaccctggcagccgtagtcctcagtgtcgcagtcaatcagc 322
Query: 802 tcctgctccgacagcgacaccaggttacccgtcgcgatcgcgttcaccccctcgatggcc 861
||||||||||||||||| | ||||| |||| ||||| ||| | |||||| |||||
Sbjct: 323 tcctgctccgacagcgatatgaggttgttcgtcacgatcttgttgatcccctccatggct 382
Query: 862 gccaccgccgagaacgcccagcacccacc 890
|||||||||||||||||||||||||||||
Sbjct: 383 gccaccgccgagaacgcccagcacccacc 411
Score = 75.8 bits (38), Expect = 1e-011
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 899 gctggtccttgacctcggtgacggcgccaagctggcgccagtcgatggcgtcggggag 956
|||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 535 gctggttcttgaccccggtgacggcgccctgctggcgccagtcgacggcgtcggggag 592
>gb|CW438908.1|CW438908 fsbb001f156m13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f156m13, DNA
sequence
Length = 547
Score = 137 bits (69), Expect = 3e-030
Identities = 174/209 (83%)
Strand = Plus / Plus
Query: 682 gttccgatgaaggggtagtcggcctcggtgtcgatcccgccgttgccgatgacgaaccgg 741
|||||||||||||||||||||||||||||||| || ||||||||| |||| |||||| ||
Sbjct: 282 gttccgatgaaggggtagtcggcctcggtgtcaatgccgccgttgtcgatcacgaactgg 341
Query: 742 aacgcgttctccatctgcccgccgtcgcagccgctgtcctgggcgtcgcagtcgatgatc 801
|| || |||| ||||| || || | ||||||| ||||| | |||| |||| || | |
Sbjct: 342 aaagctttctgcatctctccaccctggcagccgtagtcctcagtgtcgtagtcaatcagc 401
Query: 802 tcctgctccgacagcgacaccaggttacccgtcgcgatcgcgttcaccccctcgatggcc 861
||||||||||||||||| | ||||| |||| ||||| ||| | |||||| |||||
Sbjct: 402 tcctgctccgacagcgatatgaggttgttcgtcacgatcttgttgatcccctccatggct 461
Query: 862 gccaccgccgagaacgcccagcacccacc 890
|||||||||||||||||||||||||||||
Sbjct: 462 gccaccgccgagaacgcccagcacccacc 490
Score = 69.9 bits (35), Expect = 6e-010
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 512 ccgaactgtagtgctggaacgcacgcccgcctgcgtcgatggcgacactgacgggctgga 571
|||| |||||||| ||||||||| | | || | ||| |||||||||||||| ||||||
Sbjct: 10 ccgagctgtagtgttggaacgcaggactgctcgagtcaatggcgacactgaccggctggt 69
Query: 572 tcgccaccgcctcctgcagcgcc 594
|||||||||||| ||||||||||
Sbjct: 70 tcgccaccgccttctgcagcgcc 92
>gb|CW111628.1|CW111628 104_485_11104425_116_34537_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11104425, DNA
sequence
Length = 146
Score = 131 bits (66), Expect = 2e-028
Identities = 110/125 (88%), Gaps = 6/125 (4%)
Strand = Plus / Plus
Query: 1240 ccgtgcttcgacttccacgcctcgtacatgcgccgcacctcctcgtccgcccgctccgct 1299
|||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 28 ccgtgcttggacttccacgcctcgtacatacgccgcacctcctcatccgcccgctccgcc 87
Query: 1300 ggcgccgggacgcgggtggtggtggtggtgtaggagtggcgggccgccgccgtggcggcc 1359
|||||||| || | ||||||||||||| |||||||||||| ||||||||| ||||
Sbjct: 88 ggcgccggaac------gatggtggtggtgtaagagtggcgggccaccgccgtggtggcc 141
Query: 1360 agtgc 1364
|||||
Sbjct: 142 agtgc 146
>gb|CW295800.1|CW295800 104_777_11461144_116_35623_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11461144, DNA
sequence
Length = 538
Score = 105 bits (53), Expect = 1e-020
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 682 gttccgatgaaggggtagtcggcctcggtgtcgatcccgccgttgccgatgacgaaccgg 741
|||||||||||||||||||||||||||||||| || ||||||||| |||| |||||| ||
Sbjct: 164 gttccgatgaaggggtagtcggcctcggtgtcaatgccgccgttgtcgatcacgaactgg 105
Query: 742 aacgcgttctccatctgcccgccgtcgcagccgctgtcctgggcgtcgcagtcgatgatc 801
|| || |||| ||||| || || | ||||||| ||||| | ||||||||| || | |
Sbjct: 104 aaagctttctgcatctctccaccctggcagccgtagtcctcagtgtcgcagtcaatcagc 45
Query: 802 tcctgctccgacagcga 818
|||||||||||||||||
Sbjct: 44 tcctgctccgacagcga 28
Score = 69.9 bits (35), Expect = 6e-010
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 512 ccgaactgtagtgctggaacgcacgcccgcctgcgtcgatggcgacactgacgggctgga 571
|||| |||||||| ||||||||| | | || | ||| |||||||||||||| ||||||
Sbjct: 436 ccgagctgtagtgttggaacgcaggactgctcgagtcaatggcgacactgaccggctggt 377
Query: 572 tcgccaccgcctcctgcagcgcc 594
|||||||||||| ||||||||||
Sbjct: 376 tcgccaccgccttctgcagcgcc 354
>gb|BZ365981.1|BZ365981 ic93g12.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic93g12 5', DNA sequence
Length = 587
Score = 101 bits (51), Expect = 2e-019
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 408 ccacgagttcttcacgatccagtagtccttgccgctctcgctgccgtagcccaccgccgt 467
|||||||||||| ||||||||| |||||| |||| | |||||||||||||||||||||||
Sbjct: 405 ccacgagttcttgacgatccagaagtcctcgccgttgtcgctgccgtagcccaccgccgt 464
Query: 468 gacgccgtggtccag 482
||||||||||||||
Sbjct: 465 cacgccgtggtccag 479
Score = 71.9 bits (36), Expect = 2e-010
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 319 gacgcgtccatggcgatgccgcacttgcccgtgggccggggcacgttgcgcctcatgcgg 378
|||||||||||||||||||||||||||||| ||||| | |||||| ||| |||||||
Sbjct: 311 gacgcgtccatggcgatgccgcacttgcccatgggcagaaacacgtttcgcgccatgcgg 370
Query: 379 atgtagccggcctcgcccca 398
||| ||||| |||| |||||
Sbjct: 371 atggagccgccctcccccca 390
>gb|CL177995.1|CL177995 104_385_10894245_116_31914_309 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894245, DNA
sequence
Length = 684
Score = 101 bits (51), Expect = 2e-019
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 408 ccacgagttcttcacgatccagtagtccttgccgctctcgctgccgtagcccaccgccgt 467
|||||||||||| ||||||||| |||||| |||| | |||||||||||||||||||||||
Sbjct: 579 ccacgagttcttgacgatccagaagtcctcgccgttgtcgctgccgtagcccaccgccgt 520
Query: 468 gacgccgtggtccag 482
||||||||||||||
Sbjct: 519 cacgccgtggtccag 505
Score = 71.9 bits (36), Expect = 2e-010
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 319 gacgcgtccatggcgatgccgcacttgcccgtgggccggggcacgttgcgcctcatgcgg 378
|||||||||||||||||||||||||||||| ||||| | |||||| ||| |||||||
Sbjct: 673 gacgcgtccatggcgatgccgcacttgcccatgggcagaaacacgtttcgcgccatgcgg 614
Query: 379 atgtagccggcctcgcccca 398
||| ||||| |||| |||||
Sbjct: 613 atggagccgccctcccccca 594
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 524 gctggaacgcacgcccgcctgcgtcgatggcgacactgacgggctggatcgccaccgcct 583
||||||| ||| | ||||| || || |||||||| || || |||||| ||||||||||||
Sbjct: 387 gctggaatgcaagaccgccggcatcaatggcgacgctaaccggctggttcgccaccgcct 328
Query: 584 cctgcagcgccgtctcgttgttg 606
|||||| ||| |||||||||||
Sbjct: 327 tctgcagagccttctcgttgttg 305
Score = 56.0 bits (28), Expect = 1e-005
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 754 atctgcccgccgtcgcagccgctgtcctgggcgtcgcagtcgatgatctcctgctccgac 813
||||||||||||| ||||||| ||||| | ||||||||| || | |||||||||||||
Sbjct: 64 atctgcccgccgttgcagccgtagtcctcagtgtcgcagtcaatcagctcctgctccgac 5
Query: 814 agcg 817
||||
Sbjct: 4 agcg 1
>gb|CW071662.1|CW071662 104_323_10591624_114_30474 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10591624, DNA
sequence
Length = 647
Score = 101 bits (51), Expect = 2e-019
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 408 ccacgagttcttcacgatccagtagtccttgccgctctcgctgccgtagcccaccgccgt 467
|||||||||||| ||||||||| |||||| |||| | |||||||||||||||||||||||
Sbjct: 27 ccacgagttcttgacgatccagaagtcctcgccgttgtcgctgccgtagcccaccgccgt 86
Query: 468 gacgccgtggtccag 482
||||||||||||||
Sbjct: 87 cacgccgtggtccag 101
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 524 gctggaacgcacgcccgcctgcgtcgatggcgacactgacgggctggatcgccaccgcct 583
||||||| ||| | ||||| || || |||||||| || || |||||| ||||||||||||
Sbjct: 219 gctggaatgcaagaccgccggcatcaatggcgacgctaaccggctggttcgccaccgcct 278
Query: 584 cctgcagcgccgtctcgttgttg 606
|||||| ||| |||||||||||
Sbjct: 279 tctgcagagccttctcgttgttg 301
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 754 atctgcccgccgtcgcagccgctgtcctgggcgtcgcagtcgatgatctcctgctccgac 813
||||||||||||| ||||||| ||||| | ||||||||| || | |||||||||||||
Sbjct: 542 atctgcccgccgttgcagccgtagtcctcagtgtcgcagtcaatcagctcctgctccgac 601
Query: 814 agcga 818
|||||
Sbjct: 602 agcga 606
>gb|CW166561.1|CW166561 104_575_11153119_116_36768_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11153119, DNA
sequence
Length = 672
Score = 101 bits (51), Expect = 2e-019
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 408 ccacgagttcttcacgatccagtagtccttgccgctctcgctgccgtagcccaccgccgt 467
|||||||||||| ||||||||| |||||| |||| | |||||||||||||||||||||||
Sbjct: 359 ccacgagttcttgacgatccagaagtcctcgccgttgtcgctgccgtagcccaccgccgt 418
Query: 468 gacgccgtggtccag 482
||||||||||||||
Sbjct: 419 cacgccgtggtccag 433
Score = 71.9 bits (36), Expect = 2e-010
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 319 gacgcgtccatggcgatgccgcacttgcccgtgggccggggcacgttgcgcctcatgcgg 378
|||||||||||||||||||||||||||||| ||||| | |||||| ||| |||||||
Sbjct: 265 gacgcgtccatggcgatgccgcacttgcccatgggcagaaacacgtttcgcgccatgcgg 324
Query: 379 atgtagccggcctcgcccca 398
||| ||||| |||| |||||
Sbjct: 325 atggagccgccctcccccca 344
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 524 gctggaacgcacgcccgcctgcgtcgatggcgacactgacgggctggatcgccaccgcct 583
||||||| ||| | ||||| || || |||||||| || || |||||| ||||||||||||
Sbjct: 551 gctggaatgcaagaccgccggcatcaatggcgacgctaaccggctggttcgccaccgcct 610
Query: 584 cctgcagcgccgtctcgttgttg 606
|||||| ||| |||||||||||
Sbjct: 611 tctgcagagccttctcgttgttg 633
>gb|CW166563.1|CW166563 104_575_11153120_116_36765_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11153120, DNA
sequence
Length = 694
Score = 101 bits (51), Expect = 2e-019
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 408 ccacgagttcttcacgatccagtagtccttgccgctctcgctgccgtagcccaccgccgt 467
|||||||||||| ||||||||| |||||| |||| | |||||||||||||||||||||||
Sbjct: 359 ccacgagttcttgacgatccagaagtcctcgccgttgtcgctgccgtagcccaccgccgt 418
Query: 468 gacgccgtggtccag 482
||||||||||||||
Sbjct: 419 cacgccgtggtccag 433
Score = 71.9 bits (36), Expect = 2e-010
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 319 gacgcgtccatggcgatgccgcacttgcccgtgggccggggcacgttgcgcctcatgcgg 378
|||||||||||||||||||||||||||||| ||||| | |||||| ||| |||||||
Sbjct: 265 gacgcgtccatggcgatgccgcacttgcccatgggcagaaacacgtttcgcgccatgcgg 324
Query: 379 atgtagccggcctcgcccca 398
||| ||||| |||| |||||
Sbjct: 325 atggagccgccctcccccca 344
Score = 58.0 bits (29), Expect = 2e-006
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 550 atggcgacactgacgggctggatcgccaccgcctcctgcagcgccgtctcgttgttg 606
|||||||| || || |||||| |||||||||||| |||||| ||| |||||||||||
Sbjct: 577 atggcgacgctaaccggctggttcgccaccgccttctgcagagccttctcgttgttg 633
>gb|CW398250.1|CW398250 fsbb001f087j18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f087j18, DNA
sequence
Length = 684
Score = 101 bits (51), Expect = 2e-019
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 408 ccacgagttcttcacgatccagtagtccttgccgctctcgctgccgtagcccaccgccgt 467
|||||||||||| ||||||||| |||||| |||| | |||||||||||||||||||||||
Sbjct: 582 ccacgagttcttgacgatccagaagtcctcgccgttgtcgctgccgtagcccaccgccgt 523
Query: 468 gacgccgtggtccag 482
||||||||||||||
Sbjct: 522 cacgccgtggtccag 508
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 524 gctggaacgcacgcccgcctgcgtcgatggcgacactgacgggctggatcgccaccgcct 583
||||||| ||| | ||||| || || |||||||| || || |||||| ||||||||||||
Sbjct: 390 gctggaatgcaagaccgccggcatcaatggcgacgctaaccggctggttcgccaccgcct 331
Query: 584 cctgcagcgccgtctcgttgttg 606
|||||| ||| |||||||||||
Sbjct: 330 tctgcagagccttctcgttgttg 308
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 754 atctgcccgccgtcgcagccgctgtcctgggcgtcgcagtcgatgatctcctgctccgac 813
||||||||||||| ||||||| ||||| | ||||||||| || | |||||||||||||
Sbjct: 67 atctgcccgccgttgcagccgtagtcctcagtgtcgcagtcaatcagctcctgctccgac 8
Query: 814 agcga 818
|||||
Sbjct: 7 agcga 3
Score = 56.0 bits (28), Expect = 1e-005
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 326 ccatggcgatgccgcacttgcccgtgggccggggcacgttgcgcctcatgcggatgtagc 385
||||||||||||||||||||||| ||||| | |||||| ||| |||||||||| |||
Sbjct: 670 ccatggcgatgccgcacttgcccatgggcagaaacacgtttcgcgccatgcggatggagc 611
Query: 386 cggcctcgcccc 397
|| |||| ||||
Sbjct: 610 cgccctcccccc 599
>gb|CW166562.1|CW166562 104_575_11153119_148_36767_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11153119, DNA
sequence
Length = 651
Score = 97.6 bits (49), Expect = 3e-018
Identities = 115/137 (83%)
Strand = Plus / Minus
Query: 754 atctgcccgccgtcgcagccgctgtcctgggcgtcgcagtcgatgatctcctgctccgac 813
||||||||||||| ||||||| ||||| | ||||||||| || | |||||||||||||
Sbjct: 256 atctgcccgccgttgcagccgtagtcctcagtgtcgcagtcaatcagctcctgctccgac 197
Query: 814 agcgacaccaggttacccgtcgcgatcgcgttcaccccctcgatggccgccaccgccgag 873
||||| | ||||| |||| ||||| ||| | |||||| ||||| ||||||||||||
Sbjct: 196 agcgatatgaggttgttcgtcacgatcttgttgatcccctccatggctgccaccgccgag 137
Query: 874 aacgcccagcacccacc 890
|||||||||||||||||
Sbjct: 136 aacgcccagcacccacc 120
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 524 gctggaacgcacgcccgcctgcgtcgatggcgacactgacgggctggatcgccaccgcct 583
||||||| ||| | ||||| || || |||||||| || || |||||| ||||||||||||
Sbjct: 579 gctggaatgcaagaccgccggcatcaatggcgacgctaaccggctggttcgccaccgcct 520
Query: 584 cctgcagcgccgtctcgttgttg 606
|||||| ||| |||||||||||
Sbjct: 519 tctgcagagccttctcgttgttg 497
>gb|CW166564.1|CW166564 104_575_11153120_148_36766_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11153120, DNA
sequence
Length = 691
Score = 97.6 bits (49), Expect = 3e-018
Identities = 115/137 (83%)
Strand = Plus / Minus
Query: 754 atctgcccgccgtcgcagccgctgtcctgggcgtcgcagtcgatgatctcctgctccgac 813
||||||||||||| ||||||| ||||| | ||||||||| || | |||||||||||||
Sbjct: 256 atctgcccgccgttgcagccgtagtcctcagtgtcgcagtcaatcagctcctgctccgac 197
Query: 814 agcgacaccaggttacccgtcgcgatcgcgttcaccccctcgatggccgccaccgccgag 873
||||| | ||||| |||| ||||| ||| | |||||| ||||| ||||||||||||
Sbjct: 196 agcgatatgaggttgttcgtcacgatcttgttgatcccctccatggctgccaccgccgag 137
Query: 874 aacgcccagcacccacc 890
|||||||||||||||||
Sbjct: 136 aacgcccagcacccacc 120
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 524 gctggaacgcacgcccgcctgcgtcgatggcgacactgacgggctggatcgccaccgcct 583
||||||| ||| | ||||| || || |||||||| || || |||||| ||||||||||||
Sbjct: 579 gctggaatgcaagaccgccggcatcaatggcgacgctaaccggctggttcgccaccgcct 520
Query: 584 cctgcagcgccgtctcgttgttg 606
|||||| ||| |||||||||||
Sbjct: 519 tctgcagagccttctcgttgttg 497
>gb|CW461362.1|CW461362 fsbb001f208p19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f208p19, DNA
sequence
Length = 701
Score = 97.6 bits (49), Expect = 3e-018
Identities = 115/137 (83%)
Strand = Plus / Minus
Query: 754 atctgcccgccgtcgcagccgctgtcctgggcgtcgcagtcgatgatctcctgctccgac 813
||||||||||||| ||||||| ||||| | ||||||||| || | |||||||||||||
Sbjct: 225 atctgcccgccgttgcagccgtagtcctcagtgtcgcagtcaatcagctcctgctccgac 166
Query: 814 agcgacaccaggttacccgtcgcgatcgcgttcaccccctcgatggccgccaccgccgag 873
||||| | ||||| |||| ||||| ||| | |||||| ||||| ||||||||||||
Sbjct: 165 agcgatatgaggttgttcgtcacgatcttgttgatcccctccatggctgccaccgccgag 106
Query: 874 aacgcccagcacccacc 890
|||||||||||||||||
Sbjct: 105 aacgcccagcacccacc 89
Score = 61.9 bits (31), Expect = 2e-007
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 524 gctggaacgcacgcccgcctgcgtcgatggcgacactgacgggctggatcgccaccgcct 583
||||||| ||| | ||||| || || |||||||| || || |||||| ||||||||||||
Sbjct: 548 gctggaatgcaagaccgccggcatcaatggcgacgctaaccggctggttcgccaccgcct 489
Query: 584 cctgcagcgccgtctcgttgttg 606
|||||| ||| |||||||||||
Sbjct: 488 tctgcagagccttctcgttgttg 466
Score = 52.0 bits (26), Expect = 1e-004
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 447 gctgccgtagcccaccgccgtgacgccgtg 476
||||||||||||||||||||| ||||||||
Sbjct: 701 gctgccgtagcccaccgccgtcacgccgtg 672
>gb|CW027936.1|CW027936 104_254_10498798_116_30396 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10498798, DNA
sequence
Length = 775
Score = 95.6 bits (48), Expect = 1e-017
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 1240 ccgtgcttcgacttccacgcctcgtacatgcgccgcacctcctcgtccgcccgctccgct 1299
||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| |
Sbjct: 29 ccgtgctccgacttccacgcctcgtacatacgccgcacctcgtcgtccgcccgctccacg 88
Query: 1300 ggcgccgg 1307
||||||||
Sbjct: 89 ggcgccgg 96
>gb|CW216615.1|CW216615 104_649_11195211_116_37125_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195211, DNA
sequence
Length = 550
Score = 95.6 bits (48), Expect = 1e-017
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 1240 ccgtgcttcgacttccacgcctcgtacatgcgccgcacctcctcgtccgcccgctccgct 1299
||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| |
Sbjct: 489 ccgtgctccgacttccacgcctcgtacatacgccgcacctcgtcgtccgcccgctccacg 430
Query: 1300 ggcgccgg 1307
||||||||
Sbjct: 429 ggcgccgg 422
Score = 63.9 bits (32), Expect = 4e-008
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 1131 gtaccgaaggttgtcgcggaacacctccagccgcagccgg 1170
|||||| ||||||||||||||||||||||| |||||||||
Sbjct: 550 gtaccgcaggttgtcgcggaacacctccagacgcagccgg 511
>gb|CW160701.1|CW160701 104_567_11150024_116_36507_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11150024, DNA
sequence
Length = 616
Score = 93.7 bits (47), Expect = 4e-017
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 408 ccacgagttcttcacgatccagtagtccttgccgctctcgctgccgtagcccaccgccgt 467
|||||||||||| ||||||||| |||||| |||| | ||||||||||||||||||| |||
Sbjct: 359 ccacgagttcttgacgatccagaagtcctcgccgttgtcgctgccgtagcccaccgacgt 418
Query: 468 gacgccgtggtccag 482
||||||||||||||
Sbjct: 419 cacgccgtggtccag 433
Score = 71.9 bits (36), Expect = 2e-010
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 319 gacgcgtccatggcgatgccgcacttgcccgtgggccggggcacgttgcgcctcatgcgg 378
|||||||||||||||||||||||||||||| ||||| | |||||| ||| |||||||
Sbjct: 265 gacgcgtccatggcgatgccgcacttgcccatgggcagaaacacgtttcgcgccatgcgg 324
Query: 379 atgtagccggcctcgcccca 398
||| ||||| |||| |||||
Sbjct: 325 atggagccgccctcccccca 344
Score = 44.1 bits (22), Expect = 0.036
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 524 gctggaacgcacgcccgcctgcgtcgatggcgacactgacgggctggatcgccaccgcct 583
||||||| ||| | ||||| || || |||||||| || || |||||| ||||||||||||
Sbjct: 551 gctggaatgcaagaccgccggcatcaatggcgacgctaaccggctggttcgccaccgcct 610
Query: 584 cctgca 589
|||||
Sbjct: 611 tctgca 616
>gb|CX613681.1|CX613681 GABR1_9_C10.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_9_C10_A002 5', mRNA sequence
Length = 769
Score = 91.7 bits (46), Expect = 2e-016
Identities = 106/126 (84%)
Strand = Plus / Minus
Query: 801 ctcctgctccgacagcgacaccaggttacccgtcgcgatcgcgttcaccccctcgatggc 860
|||||||||||||||||||||||| |||||| |||| ||||| ||| || | ||
Sbjct: 671 ctcctgctccgacagcgacaccagacgccccgtccggatcttgttcagcccttccaccgc 612
Query: 861 cgccaccgccgagaacgcccagcacccaccgcactgttgctggtccttgacctcggtgac 920
|||||||||||||||||||||||| | |||||||| | |||||||||||| |||||||
Sbjct: 611 cgccaccgccgagaacgcccagcagcaaccgcactctccctggtccttgacgccggtgac 552
Query: 921 ggcgcc 926
||||||
Sbjct: 551 ggcgcc 546
>gb|CW479675.1|CW479675 fsbb001f238f03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f238f03, DNA
sequence
Length = 428
Score = 87.7 bits (44), Expect = 3e-015
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 1240 ccgtgcttcgacttccacgcctcgtacatgcgccgcacctcctcgtccgcccgctccgct 1299
||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| |
Sbjct: 427 ccgtgctccgacttccacgcctcgtacatacgccgcacctggtcgtccgcccgctccacg 368
Query: 1300 ggcgccgg 1307
||||||||
Sbjct: 367 ggcgccgg 360
>gb|CW119931.1|CW119931 104_497_11109041_116_34640_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11109041, DNA
sequence
Length = 515
Score = 83.8 bits (42), Expect = 4e-014
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 1319 tggtggtggtgtaggagtggcgggccgccgccgtggcggccagtgccagt 1368
|||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 509 tggtggtggtgtaggagtggcgggccaccgccgtggtggccagtgccagt 460
>gb|BE356516.1|BE356516 DG1_125_E08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 653
Score = 81.8 bits (41), Expect = 2e-013
Identities = 94/111 (84%), Gaps = 3/111 (2%)
Strand = Plus / Minus
Query: 376 cggatgtagccggcctcgccccagctggcgctccacgagttcttcacgatccagtagtcc 435
|||||||||||| |||| ||||| || || ||||||||||||||||||||||||| ||
Sbjct: 206 cggatgtagccgccctctccccatgaggggccccacgagttcttcacgatccagtaggcc 147
Query: 436 ttgccgctctcgct---gccgtagcccaccgccgtgacgccgtggtccagg 483
||||| ||||| ||||||||| ||||||| ||||||||||||||||
Sbjct: 146 gtgccgtcgtcgctgacgccgtagccgaccgccgcgacgccgtggtccagg 96
Score = 42.1 bits (21), Expect = 0.14
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 317 aggacgcgtccatggcgatgccgca 341
||||||| |||||||||||||||||
Sbjct: 262 aggacgcctccatggcgatgccgca 238
>gb|BE360622.1|BE360622 DG1_64_G02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 673
Score = 81.8 bits (41), Expect = 2e-013
Identities = 94/111 (84%), Gaps = 3/111 (2%)
Strand = Plus / Minus
Query: 376 cggatgtagccggcctcgccccagctggcgctccacgagttcttcacgatccagtagtcc 435
|||||||||||| |||| ||||| || || ||||||||||||||||||||||||| ||
Sbjct: 248 cggatgtagccgccctctccccatgaggggccccacgagttcttcacgatccagtaggcc 189
Query: 436 ttgccgctctcgct---gccgtagcccaccgccgtgacgccgtggtccagg 483
||||| ||||| ||||||||| ||||||| ||||||||||||||||
Sbjct: 188 gtgccgtcgtcgctgacgccgtagccgaccgccgcgacgccgtggtccagg 138
Score = 42.1 bits (21), Expect = 0.14
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 317 aggacgcgtccatggcgatgccgca 341
||||||| |||||||||||||||||
Sbjct: 304 aggacgcctccatggcgatgccgca 280
>gb|BE360957.1|BE360957 DG1_68_B06.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 644
Score = 81.8 bits (41), Expect = 2e-013
Identities = 94/111 (84%), Gaps = 3/111 (2%)
Strand = Plus / Minus
Query: 376 cggatgtagccggcctcgccccagctggcgctccacgagttcttcacgatccagtagtcc 435
|||||||||||| |||| ||||| || || ||||||||||||||||||||||||| ||
Sbjct: 173 cggatgtagccgccctctccccatgaggggccccacgagttcttcacgatccagtaggcc 114
Query: 436 ttgccgctctcgct---gccgtagcccaccgccgtgacgccgtggtccagg 483
||||| ||||| ||||||||| ||||||| ||||||||||||||||
Sbjct: 113 gtgccgtcgtcgctgacgccgtagccgaccgccgcgacgccgtggtccagg 63
Score = 42.1 bits (21), Expect = 0.14
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 317 aggacgcgtccatggcgatgccgca 341
||||||| |||||||||||||||||
Sbjct: 229 aggacgcctccatggcgatgccgca 205
>gb|BE361232.1|BE361232 DG1_70_E07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 552
Score = 81.8 bits (41), Expect = 2e-013
Identities = 94/111 (84%), Gaps = 3/111 (2%)
Strand = Plus / Minus
Query: 376 cggatgtagccggcctcgccccagctggcgctccacgagttcttcacgatccagtagtcc 435
|||||||||||| |||| ||||| || || ||||||||||||||||||||||||| ||
Sbjct: 167 cggatgtagccgccctctccccatgaggggccccacgagttcttcacgatccagtaggcc 108
Query: 436 ttgccgctctcgct---gccgtagcccaccgccgtgacgccgtggtccagg 483
||||| ||||| ||||||||| ||||||| ||||||||||||||||
Sbjct: 107 gtgccgtcgtcgctgacgccgtagccgaccgccgcgacgccgtggtccagg 57
Score = 42.1 bits (21), Expect = 0.14
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 317 aggacgcgtccatggcgatgccgca 341
||||||| |||||||||||||||||
Sbjct: 223 aggacgcctccatggcgatgccgca 199
>gb|BE362011.1|BE362011 DG1_83_G04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 665
Score = 81.8 bits (41), Expect = 2e-013
Identities = 94/111 (84%), Gaps = 3/111 (2%)
Strand = Plus / Minus
Query: 376 cggatgtagccggcctcgccccagctggcgctccacgagttcttcacgatccagtagtcc 435
|||||||||||| |||| ||||| || || ||||||||||||||||||||||||| ||
Sbjct: 255 cggatgtagccgccctctccccatgaggggccccacgagttcttcacgatccagtaggcc 196
Query: 436 ttgccgctctcgct---gccgtagcccaccgccgtgacgccgtggtccagg 483
||||| ||||| ||||||||| ||||||| ||||||||||||||||
Sbjct: 195 gtgccgtcgtcgctgacgccgtagccgaccgccgcgacgccgtggtccagg 145
Score = 42.1 bits (21), Expect = 0.14
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 317 aggacgcgtccatggcgatgccgca 341
||||||| |||||||||||||||||
Sbjct: 311 aggacgcctccatggcgatgccgca 287
>gb|BG323138.1|BG323138 EM1_15_D03.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 602
Score = 81.8 bits (41), Expect = 2e-013
Identities = 94/111 (84%), Gaps = 3/111 (2%)
Strand = Plus / Minus
Query: 376 cggatgtagccggcctcgccccagctggcgctccacgagttcttcacgatccagtagtcc 435
|||||||||||| |||| ||||| || || ||||||||||||||||||||||||| ||
Sbjct: 133 cggatgtagccgccctctccccatgaggggccccacgagttcttcacgatccagtaggcc 74
Query: 436 ttgccgctctcgct---gccgtagcccaccgccgtgacgccgtggtccagg 483
||||| ||||| ||||||||| ||||||| ||||||||||||||||
Sbjct: 73 gtgccgtcgtcgctgacgccgtagccgaccgccgcgacgccgtggtccagg 23
Score = 42.1 bits (21), Expect = 0.14
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 317 aggacgcgtccatggcgatgccgca 341
||||||| |||||||||||||||||
Sbjct: 189 aggacgcctccatggcgatgccgca 165
>gb|BG355798.1|BG355798 EM1_16_H05.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 671
Score = 81.8 bits (41), Expect = 2e-013
Identities = 94/111 (84%), Gaps = 3/111 (2%)
Strand = Plus / Minus
Query: 376 cggatgtagccggcctcgccccagctggcgctccacgagttcttcacgatccagtagtcc 435
|||||||||||| |||| ||||| || || ||||||||||||||||||||||||| ||
Sbjct: 232 cggatgtagccgccctctccccatgaggggccccacgagttcttcacgatccagtaggcc 173
Query: 436 ttgccgctctcgct---gccgtagcccaccgccgtgacgccgtggtccagg 483
||||| ||||| ||||||||| ||||||| ||||||||||||||||
Sbjct: 172 gtgccgtcgtcgctgacgccgtagccgaccgccgcgacgccgtggtccagg 122
Score = 42.1 bits (21), Expect = 0.14
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 317 aggacgcgtccatggcgatgccgca 341
||||||| |||||||||||||||||
Sbjct: 288 aggacgcctccatggcgatgccgca 264
>gb|BG410804.1|BG410804 EM1_26_B07.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 603
Score = 81.8 bits (41), Expect = 2e-013
Identities = 94/111 (84%), Gaps = 3/111 (2%)
Strand = Plus / Minus
Query: 376 cggatgtagccggcctcgccccagctggcgctccacgagttcttcacgatccagtagtcc 435
|||||||||||| |||| ||||| || || ||||||||||||||||||||||||| ||
Sbjct: 169 cggatgtagccgccctctccccatgaggggccccacgagttcttcacgatccagtaggcc 110
Query: 436 ttgccgctctcgct---gccgtagcccaccgccgtgacgccgtggtccagg 483
||||| ||||| ||||||||| ||||||| ||||||||||||||||
Sbjct: 109 gtgccgtcgtcgctgacgccgtagccgaccgccgcgacgccgtggtccagg 59
Score = 42.1 bits (21), Expect = 0.14
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 317 aggacgcgtccatggcgatgccgca 341
||||||| |||||||||||||||||
Sbjct: 225 aggacgcctccatggcgatgccgca 201
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 623,507
Number of Sequences: 832831
Number of extensions: 623507
Number of successful extensions: 217963
Number of sequences better than 0.5: 400
Number of HSP's better than 0.5 without gapping: 398
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 216748
Number of HSP's gapped (non-prelim): 1160
length of query: 1467
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1447
effective length of database: 474,703,049
effective search space: 686895311903
effective search space used: 686895311903
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)