BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3802552.2.1
(252 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|U51569.1|SBU51569 Sorghum bicolor chalcone synthase (CHS... 258 2e-067
gb|AF152550.1|AF152550 Sorghum bicolor chalcone synthase 3 ... 258 2e-067
gb|AF152552.1|AF152552 Sorghum bicolor chalcone synthase 5 ... 258 2e-067
gb|BE357763.1|BE357763 DG1_22_G09.b1_A002 Dark Grown 1 (DG1... 252 1e-065
gb|AF152553.1|AF152553 Sorghum bicolor chalcone synthase 6 ... 250 5e-065
gb|AF152551.1|AF152551 Sorghum bicolor chalcone synthase 4 ... 234 3e-060
gb|BE361141.1|BE361141 DG1_70_C01.b1_A002 Dark Grown 1 (DG1... 230 5e-059
gb|BE362252.1|BE362252 DG1_85_F07.b1_A002 Dark Grown 1 (DG1... 228 2e-058
gb|CN141529.1|CN141529 OX1_52_E12.b1_A002 Oxidatively-stres... 226 7e-058
gb|AF152548.1|AF152548 Sorghum bicolor chalcone synthase 1 ... 226 7e-058
gb|BE357552.1|BE357552 DG1_21_G10.b1_A002 Dark Grown 1 (DG1... 224 3e-057
gb|AF152549.1|AF152549 Sorghum bicolor chalcone synthase 2 ... 220 5e-056
gb|CN137159.1|CN137159 OX1_55_C01.g1_A002 Oxidatively-stres... 208 2e-052
gb|CN136049.1|CN136049 OX1_40_B06.g1_A002 Oxidatively-stres... 204 3e-051
gb|AF152554.1|AF152554 Sorghum bicolor chalcone synthase 7 ... 204 3e-051
gb|AW671616.1|AW671616 LG1_348_A08.b1_A002 Light Grown 1 (L... 196 7e-049
gb|CN137530.1|CN137530 OX1_57_H07.g1_A002 Oxidatively-stres... 188 2e-046
gb|CX611634.1|CX611634 ANR1_25_G03.g1_A002 Anaerobic roots ... 184 3e-045
gb|CX606882.1|CX606882 ANR1_5_B02.g1_A002 Anaerobic roots S... 176 6e-043
gb|CN137905.1|CN137905 OX1_60_B02.g1_A002 Oxidatively-stres... 165 2e-039
gb|CX615552.1|CX615552 GABR1_20_G03.g1_A002 GA- or brassino... 165 2e-039
gb|BE362244.1|BE362244 DG1_85_H08.b1_A002 Dark Grown 1 (DG1... 159 1e-037
gb|CN124863.1|CN124863 RHOH1_7_H06.b1_A002 Acid- and alkali... 155 2e-036
gb|CX606360.1|CX606360 ANR1_2_C12.g1_A002 Anaerobic roots S... 153 9e-036
gb|CX607452.1|CX607452 ANR1_8_F08.g1_A002 Anaerobic roots S... 143 9e-033
gb|CN150480.1|CN150480 WOUND1_69_A12.g1_A002 Wounded leaves... 141 3e-032
gb|CX616245.1|CX616245 GABR1_26_F05.g1_A002 GA- or brassino... 135 2e-030
gb|CX612468.1|CX612468 GABR1_2_D02.g1_A002 GA- or brassinol... 131 3e-029
gb|CN149456.1|CN149456 WOUND1_62_H04.g1_A002 Wounded leaves... 127 5e-028
gb|CF428031.1|CF428031 PH1_12_E10.g1_A002 Phosphorous-defic... 123 8e-027
gb|CF433493.1|CF433493 NIT1_27_D09.g1_A002 Nitrogen-deficie... 115 2e-024
gb|CX615434.1|CX615434 GABR1_20_D03.b1_A002 GA- or brassino... 113 8e-024
gb|BE355662.1|BE355662 DG1_116_C08.b1_A002 Dark Grown 1 (DG... 111 3e-023
gb|CN140669.1|CN140669 OX1_45_G12.g1_A002 Oxidatively-stres... 111 3e-023
gb|AY069951.1| Sorghum bicolor chalcone synthase 8 mRNA, co... 111 3e-023
gb|CF434053.1|CF434053 NIT1_31_C08.g1_A002 Nitrogen-deficie... 105 2e-021
gb|CX612623.1|CX612623 GABR1_3_B09.g1_A002 GA- or brassinol... 103 7e-021
gb|CN138700.1|CN138700 OX1_13_H11.b1_A002 Oxidatively-stres... 101 3e-020
gb|CN134537.1|CN134537 OX1_27_A10.b1_A002 Oxidatively-stres... 98 5e-019
gb|CL183868.1|CL183868 104_396_10898460_114_31923_300 Sorgh... 90 1e-016
gb|CL189061.1|CL189061 104_406_10902027_114_32469_016 Sorgh... 90 1e-016
gb|CL189062.1|CL189062 104_406_10902027_116_32473_016 Sorgh... 90 1e-016
gb|CW372554.1|CW372554 fsbb001f048i03f0 Sorghum methylation... 90 1e-016
gb|CN138784.1|CN138784 OX1_13_H11.g1_A002 Oxidatively-stres... 90 1e-016
gb|CW099739.1|CW099739 104_466_11003710_116_34383_083 Sorgh... 86 2e-015
gb|CW281339.1|CW281339 104_757_11408122_116_35462_047 Sorgh... 86 2e-015
gb|CW281340.1|CW281340 104_757_11408122_148_35458_047 Sorgh... 86 2e-015
gb|CW357338.1|CW357338 fsbb001f023p06f0 Sorghum methylation... 86 2e-015
gb|CW381807.1|CW381807 fsbb001f063g04f0 Sorghum methylation... 86 2e-015
gb|CX611286.1|CX611286 ANR1_23_F10.g1_A002 Anaerobic roots ... 86 2e-015
gb|CN124942.1|CN124942 RHOH1_7_H06.g1_A002 Acid- and alkali... 84 7e-015
gb|CN135113.1|CN135113 OX1_30_D10.g1_A002 Oxidatively-stres... 84 7e-015
gb|CX615518.1|CX615518 GABR1_20_D03.g1_A002 GA- or brassino... 80 1e-013
gb|CL171525.1|CL171525 104_373_10889485_148_31776_157 Sorgh... 78 4e-013
gb|CX609935.1|CX609935 ANR1_15_D09.g1_A002 Anaerobic roots ... 78 4e-013
gb|CX612474.1|CX612474 GABR1_2_D08.g1_A002 GA- or brassinol... 78 4e-013
gb|CX616080.1|CX616080 GABR1_25_E11.g1_A002 GA- or brassino... 78 4e-013
gb|CW022941.1|CW022941 104_162_10432146_5_30000 Sorghum met... 76 2e-012
gb|CW094175.1|CW094175 104_457_11000170_148_37475_037 Sorgh... 76 2e-012
gb|CW250462.1|CW250462 104_712_11223403_148_35056_070 Sorgh... 76 2e-012
gb|BE600826.1|BE600826 PI1_90_F05.b1_A002 Pathogen induced ... 74 7e-012
gb|CD430361.1|CD430361 ETH1_18_G09.g1_A002 Ethylene-treated... 74 7e-012
gb|CN142195.1|CN142195 WOUND1_4_A09.g1_A002 Wounded leaves ... 74 7e-012
gb|CW090473.1|CW090473 104_436_10949299_116_32608_074 Sorgh... 72 3e-011
gb|CW101015.1|CW101015 104_468_11004412_148_34395_006 Sorgh... 72 3e-011
gb|CW429192.1|CW429192 fsbb001f142f02k0 Sorghum methylation... 72 3e-011
gb|CW185786.1|CW185786 104_603_11166230_148_36703_055 Sorgh... 66 2e-009
gb|CW309367.1|CW309367 104_798_11469158_116_35734_061 Sorgh... 66 2e-009
gb|CW309368.1|CW309368 104_798_11469158_148_35742_061 Sorgh... 66 2e-009
gb|CW495432.1|CW495432 fsbb001f287d08f0 Sorghum methylation... 66 2e-009
gb|CN127587.1|CN127587 RHOH1_23_H05.g3_A002 Acid- and alkal... 66 2e-009
gb|CW147493.1|CW147493 104_540_11139538_116_34999_035 Sorgh... 64 6e-009
gb|CW166721.1|CW166721 104_575_11153209_148_36767_005 Sorgh... 64 6e-009
gb|CW166723.1|CW166723 104_575_11153210_148_36766_005 Sorgh... 64 6e-009
gb|CW224187.1|CW224187 104_660_11203315_148_37194_074 Sorgh... 64 6e-009
gb|CL150143.1|CL150143 104_331_10778311_114_31355_247 Sorgh... 60 1e-007
gb|CW319047.1|CW319047 104_811_11474277_148_35882_087 Sorgh... 60 1e-007
gb|CW099525.1|CW099525 104_466_11003598_116_34383_023 Sorgh... 56 2e-006
gb|CW178423.1|CW178423 104_592_11159551_148_36598_030 Sorgh... 56 2e-006
gb|CW307209.1|CW307209 104_795_11468021_116_35727_027 Sorgh... 56 2e-006
gb|CW307210.1|CW307210 104_795_11468021_148_35735_027 Sorgh... 56 2e-006
gb|CL187091.1|CL187091 104_402_10900646_114_32433_057 Sorgh... 54 6e-006
gb|CW512984.1|CW512984 115_3_10511125_1_30020 Sorghum unfil... 54 6e-006
gb|CW054977.1|CW054977 104_295_10516823_114_30186 Sorghum m... 54 6e-006
gb|CW185268.1|CW185268 104_602_11165974_148_36691_081 Sorgh... 54 6e-006
gb|CW246698.1|CW246698 104_707_11221446_148_35087_021 Sorgh... 54 6e-006
gb|CW339061.1|CW339061 104_839_11485073_148_36131_069 Sorgh... 54 6e-006
gb|CW427392.1|CW427392 fsbb001f139f22f0 Sorghum methylation... 54 6e-006
gb|CW429706.1|CW429706 fsbb001f143b14k0 Sorghum methylation... 54 6e-006
gb|CW455507.1|CW455507 fsbb001f200g16f0 Sorghum methylation... 54 6e-006
gb|CW424532.1|CW424532 fsbb001f134o16f0 Sorghum methylation... 52 2e-005
gb|CW134087.1|CW134087 104_518_11117119_148_34818_030 Sorgh... 50 9e-005
gb|CW313276.1|CW313276 104_803_11471200_116_35785_056 Sorgh... 50 9e-005
gb|CW348810.1|CW348810 fsbb001f009f13k0 Sorghum methylation... 50 9e-005
gb|CW383434.1|CW383434 fsbb001f065o19f0 Sorghum methylation... 50 9e-005
gb|CW448386.1|CW448386 fsbb001f181p11k0 Sorghum methylation... 50 9e-005
gb|BZ348684.1|BZ348684 hp60b01.g2 WGS-SbicolorF (JM107 adap... 48 4e-004
gb|CW353402.1|CW353402 fsbb001f016c08f0 Sorghum methylation... 48 4e-004
gb|CD431377.1|CD431377 ETH1_8_D10.g1_A002 Ethylene-treated ... 48 4e-004
gb|CN125053.1|CN125053 RHOH1_8_C09.g1_A002 Acid- and alkali... 48 4e-004
gb|CN138481.1|CN138481 OX1_64_C03.b1_A002 Oxidatively-stres... 48 4e-004
gb|CW236005.1|CW236005 104_691_11215361_148_37401_067 Sorgh... 46 0.001
gb|CW262523.1|CW262523 104_730_11230116_148_35222_046 Sorgh... 46 0.001
gb|CW289391.1|CW289391 104_768_11412453_116_35545_091 Sorgh... 46 0.001
gb|CW108444.1|CW108444 104_480_11097532_116_34496_014 Sorgh... 44 0.006
gb|CW117575.1|CW117575 104_493_11107729_148_34610_003 Sorgh... 44 0.006
gb|CW269121.1|CW269121 104_740_11401690_116_35319_043 Sorgh... 44 0.006
gb|CW305088.1|CW305088 104_790_11466132_148_37437_044 Sorgh... 44 0.006
gb|CW483265.1|CW483265 fsbb001f244n04f0 Sorghum methylation... 42 0.023
gb|BE357828.1|BE357828 DG1_22_G09.g1_A002 Dark Grown 1 (DG1... 42 0.023
gb|CX612377.1|CX612377 GABR1_2_D02.b1_A002 GA- or brassinol... 42 0.023
gb|CW042405.1|CW042405 104_276_10507093_114_30357 Sorghum m... 40 0.091
gb|CW042406.1|CW042406 104_276_10507093_114_30475 Sorghum m... 40 0.091
gb|CW042456.1|CW042456 104_276_10507117_114_30482 Sorghum m... 40 0.091
gb|CW051005.1|CW051005 104_291_10514993_114_30192 Sorghum m... 40 0.091
gb|CW443719.1|CW443719 fsbb001f163p10f0 Sorghum methylation... 40 0.091
gb|CD463350.1|CD463350 ETH1_43_C11.g1_A002 Ethylene-treated... 40 0.091
gb|CN132695.1|CN132695 OX1_7_D12.g1_A002 Oxidatively-stress... 40 0.091
gb|CL170606.1|CL170606 104_371_10813943_116_31791_263 Sorgh... 38 0.36
gb|CL170607.1|CL170607 104_371_10813943_148_31790_263 Sorgh... 38 0.36
gb|CW041533.1|CW041533 104_275_10506602_114_30284 Sorghum m... 38 0.36
gb|CW045418.1|CW045418 104_282_10509547_114_30228 Sorghum m... 38 0.36
gb|CW094174.1|CW094174 104_457_11000170_116_37476_037 Sorgh... 38 0.36
gb|CW117184.1|CW117184 104_493_11107523_148_34612_046 Sorgh... 38 0.36
gb|CW305182.1|CW305182 104_790_11466181_148_37440_057 Sorgh... 38 0.36
gb|CW324722.1|CW324722 104_819_11477310_116_35917_025 Sorgh... 38 0.36
gb|CW324723.1|CW324723 104_819_11477310_148_35913_025 Sorgh... 38 0.36
gb|CW433853.1|CW433853 fsbb001f149e08f0 Sorghum methylation... 38 0.36
gb|BE126022.1|BE126022 DG1_65_C11.b1_A002 Dark Grown 1 (DG1... 38 0.36
gb|BE126032.1|BE126032 DG1_65_D11.b1_A002 Dark Grown 1 (DG1... 38 0.36
gb|BE358998.1|BE358998 DG1_38_F07.b1_A002 Dark Grown 1 (DG1... 38 0.36
gb|BE360392.1|BE360392 DG1_63_H06.b1_A002 Dark Grown 1 (DG1... 38 0.36
gb|CD429472.1|CD429472 ETH1_4_F12.g1_A002 Ethylene-treated ... 38 0.36
gb|CD430727.1|CD430727 ETH1_20_B02.g1_A002 Ethylene-treated... 38 0.36
gb|CN137522.1|CN137522 OX1_57_G08.g1_A002 Oxidatively-stres... 38 0.36
gb|CN142235.1|CN142235 WOUND1_4_E04.g1_A002 Wounded leaves ... 38 0.36
>gb|U51569.1|SBU51569 Sorghum bicolor chalcone synthase (CHS) gene, allele 2G, exon 2,
partial cds
Length = 620
Score = 258 bits (130), Expect = 2e-067
Identities = 213/241 (88%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 72 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcctggccaaggacctcgccga 131
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
||||||||| || ||||| || ||||||||||||||||||||||| | ||||||||||||
Sbjct: 132 gaacaaccgtggggcgcgcgtcctggtggtgtgctccgagatcaccgccgtcacgttccg 191
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgc 191
|| ||||||||||| ||||||||||| | || ||||| ||||||||||||||||| ||
Sbjct: 192 tggaccctccgagtcccacctcgactccatggttggccaagcgctgttcggcgacggtgc 251
Query: 192 ggcggccgtggtcgtgggcgccgacccggacgaccgcgtcgagcgcccgctcttccagct 251
||||| || ||||||| || ||||| ||||| ||||| ||||||||||| ||||||||
Sbjct: 252 tgcggcggttatcgtgggagctgaccctgacgagcgcgtggagcgcccgctgttccagct 311
Query: 252 c 252
|
Sbjct: 312 c 312
>gb|AF152550.1|AF152550 Sorghum bicolor chalcone synthase 3 (CHS3) gene, complete cds
Length = 2137
Score = 258 bits (130), Expect = 2e-067
Identities = 213/241 (88%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1196 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggacctcgccga 1255
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
|||||||||||| ||||| || ||||||||||||||||||||||| | |||||||||||
Sbjct: 1256 gaacaaccgcggggcgcgcgtcctggtggtgtgctccgagatcaccgcggtcacgttccg 1315
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgc 191
|| ||||||||||| ||||| ||||| | || ||||| ||||||||||||||||||||
Sbjct: 1316 gggaccctccgagtcccaccttgactccatggttggccaagcgctgttcggcgacggcgc 1375
Query: 192 ggcggccgtggtcgtgggcgccgacccggacgaccgcgtcgagcgcccgctcttccagct 251
||||| || | ||||| || ||||| ||||| ||||| ||||||||||| ||||||||
Sbjct: 1376 tgcggcggttattgtgggagctgaccctgacgagcgcgtggagcgcccgctgttccagct 1435
Query: 252 c 252
|
Sbjct: 1436 c 1436
>gb|AF152552.1|AF152552 Sorghum bicolor chalcone synthase 5 (CHS5) gene, complete cds
Length = 3960
Score = 258 bits (130), Expect = 2e-067
Identities = 213/241 (88%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2916 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggacctcgccga 2975
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
||||||||| || ||||| || ||||||||||||||||||||||| | ||||||||||||
Sbjct: 2976 gaacaaccgtggggcgcgcgtcctggtggtgtgctccgagatcaccgccgtcacgttccg 3035
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgc 191
|| ||||||||||| ||||||||||| | || ||||| ||||||||||||||||| ||
Sbjct: 3036 tggaccctccgagtcccacctcgactccatggttggccaagcgctgttcggcgacggtgc 3095
Query: 192 ggcggccgtggtcgtgggcgccgacccggacgaccgcgtcgagcgcccgctcttccagct 251
||||| || | ||||| || ||||| ||||| ||||| ||||||||||| ||||||||
Sbjct: 3096 tgcggcggttattgtgggagctgaccctgacgagcgcgtggagcgcccgctgttccagct 3155
Query: 252 c 252
|
Sbjct: 3156 c 3156
>gb|BE357763.1|BE357763 DG1_22_G09.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 615
Score = 252 bits (127), Expect = 1e-065
Identities = 210/238 (88%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 378 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggacctcgccga 437
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
||||||||| || ||||| || ||||||||||||||||||||||| | ||||||||||||
Sbjct: 438 gaacaaccgtggggcgcgcgtcctggtggtgtgctccgagatcaccgccgtcacgttccg 497
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgc 191
|| ||||||||||| ||||||||||| | || ||||| ||||||||||||||||| ||
Sbjct: 498 tggaccctccgagtcccacctcgactccatggttggccaagcgctgttcggcgacggtgc 557
Query: 192 ggcggccgtggtcgtgggcgccgacccggacgaccgcgtcgagcgcccgctcttccag 249
||||| || | ||||| || ||||| ||||| ||||| ||||||||||| ||||||
Sbjct: 558 tgcggcggttattgtgggagctgaccctgacgagcgcgtggagcgcccgctgttccag 615
>gb|AF152553.1|AF152553 Sorghum bicolor chalcone synthase 6 (CHS6) gene, complete cds
Length = 3366
Score = 250 bits (126), Expect = 5e-065
Identities = 212/241 (87%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 2525 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggatctcgccga 2584
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
|||||||||||| ||||| || |||||||||||||| |||||||| | ||||||||||||
Sbjct: 2585 gaacaaccgcggggcgcgcgtcctggtggtgtgctctgagatcaccgccgtcacgttccg 2644
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgc 191
|||||||||||||| ||||||||||| | || |||||||||||||||||||| |||||
Sbjct: 2645 tggcccctccgagtcccacctcgactccatggtcggccaggcgctgttcggcgatggcgc 2704
Query: 192 ggcggccgtggtcgtgggcgccgacccggacgaccgcgtcgagcgcccgctcttccagct 251
|||||| || | || || || ||||| ||||| ||||| || ||||| || ||||||||
Sbjct: 2705 ggcggcggttattgtcggtgctgaccctgacgaacgcgtggaacgcccactgttccagct 2764
Query: 252 c 252
|
Sbjct: 2765 c 2765
>gb|AF152551.1|AF152551 Sorghum bicolor chalcone synthase 4 (CHS4) gene, complete cds
Length = 2469
Score = 234 bits (118), Expect = 3e-060
Identities = 210/241 (87%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1597 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggacctcgccga 1656
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
|||||||||||| ||||| || ||||||||||||||||||||||| | |||||| |||||
Sbjct: 1657 gaacaaccgcggagcgcgtgtcctggtggtgtgctccgagatcactgccgtcacattccg 1716
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgc 191
|| ||||||||||| ||||||||||| | || || |||||||||||||| || |||||
Sbjct: 1717 gggaccctccgagtcccacctcgactccatggtcgggcaggcgctgttcggtgatggcgc 1776
Query: 192 ggcggccgtggtcgtgggcgccgacccggacgaccgcgtcgagcgcccgctcttccagct 251
|||||| || | || || || ||||| ||||| || || || |||||||| ||||||||
Sbjct: 1777 ggcggcggttattgtcggtgctgaccccgacgagcgtgtggaacgcccgctgttccagct 1836
Query: 252 c 252
|
Sbjct: 1837 c 1837
>gb|BE361141.1|BE361141 DG1_70_C01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 457
Score = 230 bits (116), Expect = 5e-059
Identities = 196/223 (87%)
Strand = Plus / Plus
Query: 30 cgcgggcggcacggtgctgcgcgtggccaaggacctcgcggagaacaaccgcggcgcgcg 89
||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 1 cgcgggcggcacggtgctgcgcgtggccaaggacctcgccgagaacaaccgtggggcgcg 60
Query: 90 ggtgctggtggtgtgctccgagatcacggncgtcacgttccgcggcccctccgagtcgca 149
|| ||||||||||||||||||||||| | |||||||||||| || ||||||||||| ||
Sbjct: 61 cgtcctggtggtgtgctccgagatcaccgccgtcacgttccgtggaccctccgagtccca 120
Query: 150 cctcgactcgctcgtgggccaggcgctgttcggcgacggcgcggcggccgtggtcgtggg 209
||||||||| | || ||||| ||||||||||||||||| || ||||| || | |||||
Sbjct: 121 cctcgactccatggttggccaagcgctgttcggcgacggtgctgcggcggttattgtggg 180
Query: 210 cgccgacccggacgaccgcgtcgagcgcccgctcttccagctc 252
|| ||||| ||||| ||||| ||||||||||| |||||||||
Sbjct: 181 agctgaccctgacgagcgcgtggagcgcccgctgttccagctc 223
>gb|BE362252.1|BE362252 DG1_85_F07.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 591
Score = 228 bits (115), Expect = 2e-058
Identities = 168/186 (90%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 405 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggacctcgccga 464
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
|||||||||||| ||||| || ||||||||||||||||||||||| | |||||| |||||
Sbjct: 465 gaacaaccgcggagcgcgtgtcctggtggtgtgctccgagatcactgccgtcacattccg 524
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgc 191
|| ||||||||||| ||||||||||| | || || |||||||||||||| || |||||
Sbjct: 525 gggaccctccgagtcccacctcgactccatggtcgggcaggcgctgttcggtgatggcgc 584
Query: 192 ggcggc 197
||||||
Sbjct: 585 ggcggc 590
>gb|CN141529.1|CN141529 OX1_52_E12.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_52_E12_A002 3', mRNA sequence
Length = 750
Score = 226 bits (114), Expect = 7e-058
Identities = 209/241 (86%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||||| || |||||||||||||||||||||||||||||||| ||
Sbjct: 201 gtaccagcaggggtgcttcgcaggtggcacggtgctgcgcgtggccaaggacctcgccga 260
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
|||||||||||| || || || ||||||||||||||||||||||| | ||| ||||| ||
Sbjct: 261 gaacaaccgcggggcacgcgtcctggtggtgtgctccgagatcaccgccgtaacgtttcg 320
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgc 191
|| ||||||||||| |||||||| || | || |||||||||||||||||||| |||||
Sbjct: 321 gggaccctccgagtcccacctcgattccatggtcggccaggcgctgttcggcgatggcgc 380
Query: 192 ggcggccgtggtcgtgggcgccgacccggacgaccgcgtcgagcgcccgctcttccagct 251
|||||| || | ||||| || ||||| ||||| ||||| ||||||||| | ||||||||
Sbjct: 381 ggcggcagttattgtgggagctgaccctgacgagcgcgtggagcgcccgttgttccagct 440
Query: 252 c 252
|
Sbjct: 441 c 441
>gb|AF152548.1|AF152548 Sorghum bicolor chalcone synthase 1 (CHS1) gene, complete cds
Length = 2078
Score = 226 bits (114), Expect = 7e-058
Identities = 209/241 (86%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||||| || |||||||||||||||||||||||||||||||| ||
Sbjct: 1212 gtaccagcaggggtgcttcgcaggtggcacggtgctgcgcgtggccaaggacctcgccga 1271
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
|||||||||||| || || || ||||||||||||||||||||||| | ||| ||||| ||
Sbjct: 1272 gaacaaccgcggggcacgcgtcctggtggtgtgctccgagatcaccgccgtaacgtttcg 1331
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgc 191
|| ||||||||||| |||||||| || | || |||||||||||||||||||| |||||
Sbjct: 1332 gggaccctccgagtcccacctcgattccatggtcggccaggcgctgttcggcgatggcgc 1391
Query: 192 ggcggccgtggtcgtgggcgccgacccggacgaccgcgtcgagcgcccgctcttccagct 251
|||||| || | ||||| || ||||| ||||| ||||| ||||||||| | ||||||||
Sbjct: 1392 ggcggcagttattgtgggagctgaccctgacgagcgcgtggagcgcccgttgttccagct 1451
Query: 252 c 252
|
Sbjct: 1452 c 1452
>gb|BE357552.1|BE357552 DG1_21_G10.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 605
Score = 224 bits (113), Expect = 3e-057
Identities = 200/228 (87%), Gaps = 1/228 (0%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 378 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggacctcgccga 437
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
||||||||| || ||||| || ||||||||||||||||||||||| | ||||||||||||
Sbjct: 438 gaacaaccgtggggcgcgcgtcctggtggtgtgctccgagatcaccgccgtcacgttccg 497
Query: 132 cggcccctccgagtcgcacctc-gactcgctcgtgggccaggcgctgttcggcgacggcg 190
|| ||||||||||| |||||| ||||| | || ||||| ||||||||||||||||| |
Sbjct: 498 tggaccctccgagtcccacctcggactccatggttggccaagcgctgttcggcgacggtg 557
Query: 191 cggcggccgtggtcgtgggcgccgacccggacgaccgcgtcgagcgcc 238
| ||||| || | ||||| || ||||| ||||| ||||| |||||||
Sbjct: 558 ctgcggcggttattgtgggagctgaccctgacgagcgcgtggagcgcc 605
>gb|AF152549.1|AF152549 Sorghum bicolor chalcone synthase 2 (CHS2) gene, complete cds
Length = 2100
Score = 220 bits (111), Expect = 5e-056
Identities = 167/186 (89%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 1234 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggctaaggacctcgccga 1293
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
||||||||| || ||||| || ||||||||||||||||||||||| | ||||||||||||
Sbjct: 1294 gaacaaccgtggggcgcgcgtcctggtggtgtgctccgagatcaccgccgtcacgttccg 1353
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgc 191
|| ||||||||||| ||||||||||| | || || |||||||||||||||||||| ||
Sbjct: 1354 tggaccctccgagtcccacctcgactccatggtcgggcaggcgctgttcggcgacggtgc 1413
Query: 192 ggcggc 197
|||||
Sbjct: 1414 cgcggc 1419
>gb|CN137159.1|CN137159 OX1_55_C01.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_55_C01_A002 5', mRNA sequence
Length = 662
Score = 208 bits (105), Expect = 2e-052
Identities = 155/172 (90%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 491 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggacctcgccga 550
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
|||||||||||| ||||| || ||||||||||||||||||||||| | |||||||||||
Sbjct: 551 gaacaaccgcggggcgcgcgtcctggtggtgtgctccgagatcaccgcggtcacgttccg 610
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggc 183
|| ||||||||||| ||||| ||||| | || ||||| ||||||||||||
Sbjct: 611 gggaccctccgagtcccaccttgactccatggttggccaagcgctgttcggc 662
>gb|CN136049.1|CN136049 OX1_40_B06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_40_B06_A002 5', mRNA sequence
Length = 814
Score = 204 bits (103), Expect = 3e-051
Identities = 135/146 (92%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 669 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggacctcgccga 728
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
||||||||| || ||||| || ||||||||||||||||||||||| | ||||||||||||
Sbjct: 729 gaacaaccgtggggcgcgcgtcctggtggtgtgctccgagatcaccgccgtcacgttccg 788
Query: 132 cggcccctccgagtcgcacctcgact 157
|| ||||||||||| ||||||||||
Sbjct: 789 tggaccctccgagtcccacctcgact 814
>gb|AF152554.1|AF152554 Sorghum bicolor chalcone synthase 7 (CHS7) gene, complete cds
Length = 1847
Score = 204 bits (103), Expect = 3e-051
Identities = 165/186 (88%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
|||||||||||| || ||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 1101 gtaccagcagggatgcttcgcgggcggcacggtgctgcgcgtggctaaggacctcgccga 1160
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
|||||||||||| ||||| || ||||||||||||||||||||||| | |||||| |||||
Sbjct: 1161 gaacaaccgcggggcgcgtgtcctggtggtgtgctccgagatcactgccgtcacattccg 1220
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgc 191
|| || |||||||| ||||||||||| | || || ||||||||||||||||| || ||
Sbjct: 1221 gggaccatccgagtcccacctcgactccatggtcgggcaggcgctgttcggcgatggggc 1280
Query: 192 ggcggc 197
||||||
Sbjct: 1281 ggcggc 1286
>gb|AW671616.1|AW671616 LG1_348_A08.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 556
Score = 196 bits (99), Expect = 7e-049
Identities = 164/186 (88%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
|||||||||||| || ||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 298 gtaccagcagggatgcttcgcgggcggcacggtgctgcgcgtggctaaggacctcgccga 357
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
|||||||||||| ||||| || |||| |||||||||||||||||| | |||||| |||||
Sbjct: 358 gaacaaccgcggggcgcgtgtcctggaggtgtgctccgagatcactgccgtcacattccg 417
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgc 191
|| || |||||||| ||||||||||| | || || ||||||||||||||||| || ||
Sbjct: 418 gggaccatccgagtcccacctcgactccatggtcgggcaggcgctgttcggcgatggggc 477
Query: 192 ggcggc 197
||||||
Sbjct: 478 ggcggc 483
>gb|CN137530.1|CN137530 OX1_57_H07.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_57_H07_A002 5', mRNA sequence
Length = 852
Score = 188 bits (95), Expect = 2e-046
Identities = 151/170 (88%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
|||||||||||| || ||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 683 gtaccagcagggatgcttcgcgggcggcacggtgctgcgcgtggctaaggacctcgccga 742
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
|||||||||||| ||||| || ||||||||||||||||||||||| | |||||| |||||
Sbjct: 743 gaacaaccgcggggcgcgtgtcctggtggtgtgctccgagatcactgccgtcacattccg 802
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcg 181
|| || |||||||| ||||||||||| | || || |||||||||||||
Sbjct: 803 gggaccatccgagtcccacctcgactccatggtcgggcaggcgctgttcg 852
>gb|CX611634.1|CX611634 ANR1_25_G03.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_25_G03_A002 5', mRNA sequence
Length = 801
Score = 184 bits (93), Expect = 3e-045
Identities = 122/132 (92%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 670 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggacctcgccga 729
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
||||||||| || ||||| || ||||||||||||||||||||||| | ||||||||||||
Sbjct: 730 gaacaaccgtggggcgcgcgtcctggtggtgtgctccgagatcaccgccgtcacgttccg 789
Query: 132 cggcccctccga 143
|| ||||||||
Sbjct: 790 tggaccctccga 801
>gb|CX606882.1|CX606882 ANR1_5_B02.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_5_B02_A002 5', mRNA sequence
Length = 796
Score = 176 bits (89), Expect = 6e-043
Identities = 112/120 (93%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 669 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggacctcgccga 728
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
||||||||| || ||||| || ||||||||||||||||||||||| | ||||||||||||
Sbjct: 729 gaacaaccgtggggcgcgcgtcctggtggtgtgctccgagatcaccgccgtcacgttccg 788
>gb|CN137905.1|CN137905 OX1_60_B02.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_60_B02_A002 5', mRNA sequence
Length = 732
Score = 165 bits (83), Expect = 2e-039
Identities = 109/118 (92%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 615 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggcccaggacctcgccga 674
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttc 129
||||||||| || ||||| || ||||||||||||||||||||||| | ||||||||||
Sbjct: 675 gaacaaccgtggggcgcgcgtcctggtggtgtgctccgagatcaccgccgtcacgttc 732
>gb|CX615552.1|CX615552 GABR1_20_G03.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_20_G03_A002 5', mRNA sequence
Length = 778
Score = 165 bits (83), Expect = 2e-039
Identities = 109/118 (92%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 661 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggatctcgccga 720
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttc 129
|||||||||||| ||||| || |||||||||||||| |||||||| | ||||||||||
Sbjct: 721 gaacaaccgcggggcgcgcgtcctggtggtgtgctctgagatcaccgccgtcacgttc 778
>gb|BE362244.1|BE362244 DG1_85_H08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 537
Score = 159 bits (80), Expect = 1e-037
Identities = 157/183 (85%)
Strand = Plus / Plus
Query: 70 gagaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttc 129
|||||||||||||| ||||| || ||||||||||||||||||||||| | |||||||||
Sbjct: 12 gagaacaaccgcggggcgcgcgtcctggtggtgtgctccgagatcaccgcggtcacgttc 71
Query: 130 cgcggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggc 189
|| || ||||||||||| ||||| ||||| | || ||||| ||||||||||||||||||
Sbjct: 72 cggggaccctccgagtcccaccttgactccatggttggccaagcgctgttcggcgacggc 131
Query: 190 gcggcggccgtggtcgtgggcgccgacccggacgaccgcgtcgagcgcccgctcttccag 249
|| ||||| || | ||||| || ||||| ||||| ||||| ||||||||||| ||||||
Sbjct: 132 gctgcggcggttattgtgggagctgaccctgacgagcgcgtggagcgcccgctgttccag 191
Query: 250 ctc 252
|||
Sbjct: 192 ctc 194
>gb|CN124863.1|CN124863 RHOH1_7_H06.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_7_H06_A002 3', mRNA sequence
Length = 795
Score = 155 bits (78), Expect = 2e-036
Identities = 155/181 (85%)
Strand = Plus / Plus
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
|||||||||||| ||||| || |||||||||||||| |||||||| | ||||||||||||
Sbjct: 1 gaacaaccgcggggcgcgcgtcctggtggtgtgctctgagatcaccgccgtcacgttccg 60
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgc 191
|||||||||||||| ||||||||||| | || |||||||||||||||||||| |||||
Sbjct: 61 tggcccctccgagtcccacctcgactccatggtcggccaggcgctgttcggcgatggcgc 120
Query: 192 ggcggccgtggtcgtgggcgccgacccggacgaccgcgtcgagcgcccgctcttccagct 251
|||||| || | || || || ||||| ||||| ||||| || ||||| || ||||||||
Sbjct: 121 ggcggcggttattgtcggtgctgaccctgacgaacgcgtggaacgcccactgttccagct 180
Query: 252 c 252
|
Sbjct: 181 c 181
>gb|CX606360.1|CX606360 ANR1_2_C12.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_2_C12_A002 5', mRNA sequence
Length = 779
Score = 153 bits (77), Expect = 9e-036
Identities = 98/105 (93%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 669 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggacctcgccga 728
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcac 116
|| |||||| || ||||| || |||||||||||||||||||||||
Sbjct: 729 gagcaaccgtggggcgcgcgtcctggtggtgtgctccgagatcac 773
>gb|CX607452.1|CX607452 ANR1_8_F08.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_8_F08_A002 5', mRNA sequence
Length = 763
Score = 143 bits (72), Expect = 9e-033
Identities = 90/96 (93%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 668 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggacctcgccga 727
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctc 107
||||||||| || ||||| || ||||||||||||||
Sbjct: 728 gaacaaccgtggggcgcgcgtcctggtggtgtgctc 763
>gb|CN150480.1|CN150480 WOUND1_69_A12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_69_A12_A002 5', mRNA sequence
Length = 762
Score = 141 bits (71), Expect = 3e-032
Identities = 89/95 (93%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 668 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggacctcgccga 727
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgct 106
||||||||| || ||||| || |||||||||||||
Sbjct: 728 gaacaaccgtggggcgcgcgtcctggtggtgtgct 762
>gb|CX616245.1|CX616245 GABR1_26_F05.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_26_F05_A002 5', mRNA sequence
Length = 758
Score = 135 bits (68), Expect = 2e-030
Identities = 89/96 (92%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 663 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaagacctcgccga 722
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctc 107
||||||||| || ||||| || ||||||||||||||
Sbjct: 723 gaacaaccgtggggcgcgcgtcctggtggtgtgctc 758
>gb|CX612468.1|CX612468 GABR1_2_D02.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_2_D02_A002 5', mRNA sequence
Length = 762
Score = 131 bits (66), Expect = 3e-029
Identities = 87/94 (92%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 669 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccgaggacctcgccga 728
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgc 105
||||||||| || ||||| || ||||||||||||
Sbjct: 729 gaacaaccgtggggcgcgcgtcctggtggtgtgc 762
>gb|CN149456.1|CN149456 WOUND1_62_H04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_62_H04_A002 5', mRNA sequence
Length = 751
Score = 127 bits (64), Expect = 5e-028
Identities = 82/88 (93%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 664 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggacctcgccga 723
Query: 72 gaacaaccgcggcgcgcgggtgctggtg 99
||||||||| || ||||| || ||||||
Sbjct: 724 gaacaaccgaggggcgcgcgtcctggtg 751
>gb|CF428031.1|CF428031 PH1_12_E10.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_12_E10_A002 5', mRNA sequence
Length = 758
Score = 123 bits (62), Expect = 8e-027
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 674 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggacctcgccga 733
Query: 72 gaacaaccgcggcgcgcg 89
||||||||| || |||||
Sbjct: 734 gaacaaccgtggggcgcg 751
>gb|CF433493.1|CF433493 NIT1_27_D09.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_27_D09_A002 5', mRNA sequence
Length = 733
Score = 115 bits (58), Expect = 2e-024
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 668 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggacctcgccga 727
Query: 72 gaacaa 77
||||||
Sbjct: 728 gaacaa 733
>gb|CX615434.1|CX615434 GABR1_20_D03.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_20_D03_A002 3', mRNA sequence
Length = 758
Score = 113 bits (57), Expect = 8e-024
Identities = 122/144 (84%)
Strand = Plus / Plus
Query: 109 gagatcacggncgtcacgttccgcggcccctccgagtcgcacctcgactcgctcgtgggc 168
|||||||| | |||||||||||| |||||||||||||| ||||||||||| | || |||
Sbjct: 1 gagatcaccgccgtcacgttccgtggcccctccgagtcccacctcgactccatggtcggc 60
Query: 169 caggcgctgttcggcgacggcgcggcggccgtggtcgtgggcgccgacccggacgaccgc 228
||||||||||||||||| ||||||||||| || | || || || ||||| ||||| |||
Sbjct: 61 caggcgctgttcggcgatggcgcggcggcggttattgtcggtgctgaccctgacgaacgc 120
Query: 229 gtcgagcgcccgctcttccagctc 252
|| || ||||| || |||||||||
Sbjct: 121 gtggaacgcccactgttccagctc 144
>gb|BE355662.1|BE355662 DG1_116_C08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 500
Score = 111 bits (56), Expect = 3e-023
Identities = 169/207 (81%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
|||||| ||||| || ||||| ||||| | |||||| || | ||||||||||| || ||
Sbjct: 28 gtaccaccagggttgcttcgccggcggaatggtgctccgtcttgccaaggaccttgccga 87
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
||||||||| || || |||||||| | ||||||||||||||||| | |||||||||||
Sbjct: 88 gaacaaccgtggtgcccgggtgctcatcgtgtgctccgagatcaccgtggtcacgttccg 147
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgc 191
|| ||||| ||||| ||||| |||||||| || ||||| || || ||||| ||||||||
Sbjct: 148 ggggccctcggagtctcaccttgactcgcttgtcggccaagctctcttcggtgacggcgc 207
Query: 192 ggcggccgtggtcgtgggcgccgaccc 218
|| || ||| |||| ||||| |||||
Sbjct: 208 agctgcggtgatcgtcggcgcagaccc 234
>gb|CN140669.1|CN140669 OX1_45_G12.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_45_G12_A002 5', mRNA sequence
Length = 755
Score = 111 bits (56), Expect = 3e-023
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||||| || |||||||||||||||||||||||||||||||| ||
Sbjct: 674 gtaccagcaggggtgcttcgcaggtggcacggtgctgcgcgtggccaaggacctcgccga 733
Query: 72 gaacaaccgcgg 83
||||||||||||
Sbjct: 734 gaacaaccgcgg 745
>gb|AY069951.1| Sorghum bicolor chalcone synthase 8 mRNA, complete cds
Length = 1497
Score = 111 bits (56), Expect = 3e-023
Identities = 169/207 (81%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
|||||| ||||| || ||||| ||||| | |||||| || | ||||||||||| || ||
Sbjct: 577 gtaccaccagggttgcttcgccggcggaatggtgctccgtcttgccaaggaccttgccga 636
Query: 72 gaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacggncgtcacgttccg 131
||||||||| || || |||||||| | ||||||||||||||||| | |||||||||||
Sbjct: 637 gaacaaccgtggtgcccgggtgctcatcgtgtgctccgagatcaccgtggtcacgttccg 696
Query: 132 cggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcggcgacggcgc 191
|| ||||| ||||| ||||| |||||||| || ||||| || || ||||| ||||||||
Sbjct: 697 ggggccctcggagtctcaccttgactcgcttgtcggccaagctctcttcggtgacggcgc 756
Query: 192 ggcggccgtggtcgtgggcgccgaccc 218
|| || ||| |||| ||||| |||||
Sbjct: 757 agctgcggtgatcgtcggcgcagaccc 783
>gb|CF434053.1|CF434053 NIT1_31_C08.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_31_C08_A002 5', mRNA sequence
Length = 733
Score = 105 bits (53), Expect = 2e-021
Identities = 56/57 (98%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgc 68
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggacctcgc 731
>gb|CX612623.1|CX612623 GABR1_3_B09.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_3_B09_A002 5', mRNA sequence
Length = 727
Score = 103 bits (52), Expect = 7e-021
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcg 67
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggccaaggacctcg 727
>gb|CN138700.1|CN138700 OX1_13_H11.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_13_H11_A002 3', mRNA sequence
Length = 751
Score = 101 bits (51), Expect = 3e-020
Identities = 111/131 (84%)
Strand = Plus / Plus
Query: 122 tcacgttccgcggcccctccgagtcgcacctcgactcgctcgtgggccaggcgctgttcg 181
|||||||||| |||||||||||||| ||||||||||| | || ||||||||||||||||
Sbjct: 1 tcacgttccgtggcccctccgagtcccacctcgactccatggtcggccaggcgctgttcg 60
Query: 182 gcgacggcgcggcggccgtggtcgtgggcgccgacccggacgaccgcgtcgagcgcccgc 241
|||| ||||||||||| || | || || || ||||| ||||| ||||| || ||||| |
Sbjct: 61 gcgatggcgcggcggcggttattgtcggtgctgaccctgacgaacgcgtggaacgcccac 120
Query: 242 tcttccagctc 252
| |||||||||
Sbjct: 121 tgttccagctc 131
>gb|CN134537.1|CN134537 OX1_27_A10.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_27_A10_A002 3', mRNA sequence
Length = 799
Score = 97.6 bits (49), Expect = 5e-019
Identities = 90/104 (86%)
Strand = Plus / Plus
Query: 94 ctggtggtgtgctccgagatcacggncgtcacgttccgcggcccctccgagtcgcacctc 153
||||||||||||||||||||||| | |||||| ||||| || || |||||||| ||||||
Sbjct: 7 ctggtggtgtgctccgagatcactgccgtcacattccggggaccatccgagtcccacctc 66
Query: 154 gactcgctcgtgggccaggcgctgttcggcgacggcgcggcggc 197
||||| | || || ||||||||||||||||| || ||||||||
Sbjct: 67 gactccatggtcgggcaggcgctgttcggcgatggggcggcggc 110
>gb|CL183868.1|CL183868 104_396_10898460_114_31923_300 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10898460, DNA
sequence
Length = 727
Score = 89.7 bits (45), Expect = 1e-016
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 55 gccaaggacctcgcggagaacaaccgcggcgcgcgggtgctggtggtgtgctccgag 111
|||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 558 gccaaggacctcgccgagaacaaccccggcgcccgggtgctggtggtgtgctccgag 614
>gb|CL189061.1|CL189061 104_406_10902027_114_32469_016 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10902027, DNA
sequence
Length = 691
Score = 89.7 bits (45), Expect = 1e-016
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 55 gccaaggacctcgcggagaacaaccgcggcgcgcgggtgctggtggtgtgctccgag 111
|||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 401 gccaaggacctcgccgagaacaaccccggcgcccgggtgctggtggtgtgctccgag 345
>gb|CL189062.1|CL189062 104_406_10902027_116_32473_016 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10902027, DNA
sequence
Length = 655
Score = 89.7 bits (45), Expect = 1e-016
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 55 gccaaggacctcgcggagaacaaccgcggcgcgcgggtgctggtggtgtgctccgag 111
|||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 327 gccaaggacctcgccgagaacaaccccggcgcccgggtgctggtggtgtgctccgag 383
>gb|CW372554.1|CW372554 fsbb001f048i03f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f048i03, DNA
sequence
Length = 684
Score = 89.7 bits (45), Expect = 1e-016
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 55 gccaaggacctcgcggagaacaaccgcggcgcgcgggtgctggtggtgtgctccgag 111
|||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 439 gccaaggacctcgccgagaacaaccccggcgcccgggtgctggtggtgtgctccgag 495
>gb|CN138784.1|CN138784 OX1_13_H11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_13_H11_A002 5', mRNA sequence
Length = 723
Score = 89.7 bits (45), Expect = 1e-016
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggccaaggacctcgcgga 71
||||||||||||||| ||| |||||||||||||||||||||||| |||||| ||||| ||
Sbjct: 659 gtaccagcaggggtgcttcacgggcggcacggtgctgcgcgtggacaaggatctcgccga 718
Query: 72 gaaca 76
|||||
Sbjct: 719 gaaca 723
>gb|CW099739.1|CW099739 104_466_11003710_116_34383_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11003710, DNA
sequence
Length = 623
Score = 85.7 bits (43), Expect = 2e-015
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 55 gccaaggacctcgcggagaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatc 114
|||||||| |||||||||||||||||||||||||| || || |||| |||||||||||||
Sbjct: 416 gccaaggagctcgcggagaacaaccgcggcgcgcgcgtcctcgtggcgtgctccgagatc 475
Query: 115 acg 117
|||
Sbjct: 476 acg 478
Score = 40.1 bits (20), Expect = 0.091
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 164 tgggccaggcgctgttcggcgacggcgc 191
|||| ||||| |||||||||||||||||
Sbjct: 525 tgggacaggctctgttcggcgacggcgc 552
>gb|CW281339.1|CW281339 104_757_11408122_116_35462_047 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11408122, DNA
sequence
Length = 618
Score = 85.7 bits (43), Expect = 2e-015
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 55 gccaaggacctcgcggagaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatc 114
|||||||| |||||||||||||||||||||||||| || || |||| |||||||||||||
Sbjct: 581 gccaaggagctcgcggagaacaaccgcggcgcgcgcgtcctcgtggcgtgctccgagatc 522
Query: 115 acg 117
|||
Sbjct: 521 acg 519
Score = 46.1 bits (23), Expect = 0.001
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 164 tgggccaggcgctgttcggcgacggcgcggcggccgtggtcgtgggcgccgacccggacg 223
|||| ||||| ||||||||||||||||| | ||||| |||| ||||||||||| | |
Sbjct: 472 tgggacaggctctgttcggcgacggcgccggtgccgtcatcgtcggcgccgaccctgtca 413
Query: 224 accgcgtcgagcgcccgct 242
|| ||| |||||||||||
Sbjct: 412 gccccgtggagcgcccgct 394
>gb|CW281340.1|CW281340 104_757_11408122_148_35458_047 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11408122, DNA
sequence
Length = 574
Score = 85.7 bits (43), Expect = 2e-015
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 55 gccaaggacctcgcggagaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatc 114
|||||||| |||||||||||||||||||||||||| || || |||| |||||||||||||
Sbjct: 406 gccaaggagctcgcggagaacaaccgcggcgcgcgcgtcctcgtggcgtgctccgagatc 465
Query: 115 acg 117
|||
Sbjct: 466 acg 468
Score = 46.1 bits (23), Expect = 0.001
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 164 tgggccaggcgctgttcggcgacggcgcggcggccgtggtcgtgggcgccgaccc 218
|||| ||||| ||||||||||||||||| | ||||| |||| |||||||||||
Sbjct: 515 tgggacaggctctgttcggcgacggcgccggtgccgtcatcgtcggcgccgaccc 569
>gb|CW357338.1|CW357338 fsbb001f023p06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f023p06, DNA
sequence
Length = 660
Score = 85.7 bits (43), Expect = 2e-015
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 55 gccaaggacctcgcggagaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatc 114
|||||||| |||||||||||||||||||||||||| || || |||| |||||||||||||
Sbjct: 240 gccaaggagctcgcggagaacaaccgcggcgcgcgcgtcctcgtggcgtgctccgagatc 181
Query: 115 acg 117
|||
Sbjct: 180 acg 178
Score = 46.1 bits (23), Expect = 0.001
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 164 tgggccaggcgctgttcggcgacggcgcggcggccgtggtcgtgggcgccgacccggacg 223
|||| ||||| ||||||||||||||||| | ||||| |||| ||||||||||| | |
Sbjct: 131 tgggacaggctctgttcggcgacggcgccggtgccgtcatcgtcggcgccgaccctgtca 72
Query: 224 accgcgtcgagcgcccgct 242
|| ||| |||||||||||
Sbjct: 71 gccccgtggagcgcccgct 53
>gb|CW381807.1|CW381807 fsbb001f063g04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f063g04, DNA
sequence
Length = 596
Score = 85.7 bits (43), Expect = 2e-015
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 55 gccaaggacctcgcggagaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatc 114
|||||||| |||||||||||||||||||||||||| || || |||| |||||||||||||
Sbjct: 229 gccaaggagctcgcggagaacaaccgcggcgcgcgcgtcctcgtggcgtgctccgagatc 170
Query: 115 acg 117
|||
Sbjct: 169 acg 167
Score = 46.1 bits (23), Expect = 0.001
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 164 tgggccaggcgctgttcggcgacggcgcggcggccgtggtcgtgggcgccgacccggacg 223
|||| ||||| ||||||||||||||||| | ||||| |||| ||||||||||| | |
Sbjct: 120 tgggacaggctctgttcggcgacggcgccggtgccgtcatcgtcggcgccgaccctgtca 61
Query: 224 accgcgtcgagcgcccgct 242
|| ||| |||||||||||
Sbjct: 60 gccccgtggagcgcccgct 42
>gb|CX611286.1|CX611286 ANR1_23_F10.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_23_F10_A002 5', mRNA sequence
Length = 721
Score = 85.7 bits (43), Expect = 2e-015
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 12 gtaccagcaggggtggttcgcgggcggcacggtgctgcgcgtggcca 58
||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 675 gtaccagcaggggtgcttcgcgggcggcacggtgctgcgcgtggcca 721
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 99,237
Number of Sequences: 832831
Number of extensions: 99237
Number of successful extensions: 30641
Number of sequences better than 0.5: 136
Number of HSP's better than 0.5 without gapping: 134
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 30446
Number of HSP's gapped (non-prelim): 192
length of query: 252
length of database: 491,359,669
effective HSP length: 19
effective length of query: 233
effective length of database: 475,535,880
effective search space: 110799860040
effective search space used: 110799860040
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)